Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002319

Physical Location & Seq

Genomic Coordinates Reverse (-)

21583863 .. 21585133

Gene Structure 1271 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G58310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 777 bp

ATGTCTTCATCCTTCATACCAAAACGCATCGCTTTGGTCCTTAACTTGGCCATGGTAGCCATACAAGTCTTCTTTATACGCAGTGTTTCGTCCATGAACGAGACCAACTCATATCTATACCACAAATGCTCCGAGGCTGAAGGGAAATACAAGTCCAAGAGCCCGTACGAAGGAAACCTCAACTTTCTCACCAATGACATGTATAAAGACACTTTTGTAAGAGGTTTTGTCTATGCCTATCATGGTGACGATCCCAATACCGTCTACATCTTGCTCCAGTGCCGGGGTGACTCCTACGGCTCCAAGTGTGGTTCCTGCCTCTCCACTGCCACCTCCGAGCTGCGTAGAAGATGTCCTATGAACAAGGCGGGAATAGTATGGTTTGATAAATGTCTTCTCAAGATTTCTCCAACCGCTTTCTTCGAGAAGATCGATGACAAGAACAAGTTCTATATGTACAGCACAAAGAAAGTAAGCGATCCAGCGTTGTTCAATGTGAAGACAAAGGCTCTACTCACTGAGCTGACCGCAAAGGCTACTCGCAGATCAGATAAGTTATTGTTGTACGAGACAGGGGAGATGAAACTCGGGAAGATGAAGCTTTACGGAATGGTGCAGTGTAGACGGGATTTATGGTTTACGGTTTGTAAGACGTGTTTGGATAAGATTATAGGGGAGCTTCCTAAATGTTGTGATGGTAAAGAAGGAGGGAGAGTTTTGAGTGGGAGTTGTAACTTTAGATATGAGATTTACCCTTTTCTTGACACTGTTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0010033 GO:0030312 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071944 GO:0097305 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1204 Stress-antifung

Protein Analysis

258

Amino Acids

29.47

Weight (kDa)

9.2

Isoelectric Point (pI)

43.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	42 - 136	3.8e-21	Salt stress response/antifungal
Stress-antifung	PF01657	157 - 250	1e-11	Salt stress response/antifungal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002319)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Species

Orthologous Gene IDs

arabidopsis_thaliana

AT2G31620 AT3G21900 AT3G21900 AT3G21910 AT3G21920 AT3G21920 AT3G21930 AT3G21940 AT3G21940 AT3G21945 AT3G21960 AT3G21970 AT3G21980 AT3G21990 AT3G22000 AT3G22010 AT3G22020 AT3G22020 AT3G22030 AT3G22040 AT3G22050 AT3G22053 AT3G22057 AT3G29040 AT3G29050 AT3G29050 AT3G58310 AT4G20530 AT4G20540 AT4G20550 AT4G20560 AT4G20570 AT4G20580 AT4G20590 AT4G20600 AT4G20610 AT4G20620 AT4G20630 AT4G20640 AT4G20645 AT4G20670 AT4G20680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	264, 622
AciI	CCGC	3 cut(s)	368, 414, 528
AclWI	GGATC	2 cut(s)	245, 473
AcoI	YGGCCR	1 cut(s)	48
AcuI	CTGAAG	1 cut(s)	159
AfaI	GTAC	3 cut(s)	167, 458, 566
AfiI	CCNNNNNNNGG	3 cut(s)	46, 170, 283
AflIII	ACRYGT	2 cut(s)	198, 653
AgsI	TTSAA	1 cut(s)	493
AjiI	CACGTC	1 cut(s)	654
AluBI	AGCT	4 cut(s)	340, 523, 601, 679
AluI	AGCT	4 cut(s)	340, 523, 601, 679
Alw26I	GTCTC	2 cut(s)	95, 563
AlwI	GGATC	2 cut(s)	245, 473
Ama87I	CYCGRG	1 cut(s)	587
AoxI	GGCC	1 cut(s)	48
ApeKI	GCWGC	1 cut(s)	340
Asp700I	GAANNNNTTC	1 cut(s)	446
AspS9I	GGNCC	1 cut(s)	37
AsuC2I	CCSGG	1 cut(s)	284
AsuHPI	GGTGA	3 cut(s)	181, 257, 299
AvaI	CYCGRG	1 cut(s)	587
AvaII	GGWCC	1 cut(s)	37
BalI	TGGCCA	1 cut(s)	50
BanII	GRGCYC	1 cut(s)	164
BbsI	GAAGAC	3 cut(s)	61, 386, 506
BbvI	GCAGC	1 cut(s)	327
BccI	CCATC	1 cut(s)	689
BceAI	ACGGC	1 cut(s)	313
BcnI	CCSGG	1 cut(s)	284
BcoDI	GTCTC	2 cut(s)	95, 563
BisI	GCNGC	1 cut(s)	341
BlsI	GCNGC	1 cut(s)	342
Bme1390I	CCNGG	1 cut(s)	284
Bme18I	GGWCC	1 cut(s)	37
BmeT110I	CYCGRG	1 cut(s)	587
BmgBI	CACGTC	1 cut(s)	654
BmgT120I	GGNCC	1 cut(s)	37
BmiI	GGNNCC	2 cut(s)	301, 313
BmrFI	CCNGG	1 cut(s)	284
BmsI	GCATC	1 cut(s)	36
BpiI	GAAGAC	3 cut(s)	61, 386, 506
BplI	GAGNNNNNCTC	2 cut(s)	92, 124
BpmI	CTGGAG	1 cut(s)	260
BpuEI	CTTGAG	1 cut(s)	383
BpuMI	CCSGG	1 cut(s)	284
Bsa29I	ATCGAT	1 cut(s)	432
BsaI	GGTCTC	1 cut(s)	95
BsaJI	CCNNGG	3 cut(s)	51, 132, 283
BsaXI	ACNNNNNCTCC	4 cut(s)	113, 143, 699, 729
Bsc4I	CCNNNNNNNGG	3 cut(s)	46, 170, 283
Bse1I	ACTGG	1 cut(s)	277
BseCI	ATCGAT	1 cut(s)	432
BseDI	CCNNGG	3 cut(s)	51, 132, 283
BseGI	GGATG	1 cut(s)	8
BseLI	CCNNNNNNNGG	3 cut(s)	46, 170, 283
BseMII	CTCAG	1 cut(s)	510
BseNI	ACTGG	1 cut(s)	277
BseXI	GCAGC	1 cut(s)	327
BsgI	GTGCAG	1 cut(s)	635
BshFI	GGCC	1 cut(s)	50
BshVI	ATCGAT	1 cut(s)	432
BsiHKCI	CYCGRG	1 cut(s)	587
BsiSI	CCGG	1 cut(s)	283
BsiWI	CGTACG	1 cut(s)	165
BslI	CCNNNNNNNGG	3 cut(s)	46, 170, 283
BsmAI	GTCTC	2 cut(s)	95, 563
BsnI	GGCC	1 cut(s)	50
Bso31I	GGTCTC	1 cut(s)	95
BsoBI	CYCGRG	1 cut(s)	587
Bsp1286I	GDGCHC	1 cut(s)	164
Bsp1407I	TGTACA	1 cut(s)	456
Bsp143I	GATC	4 cut(s)	250, 429, 478, 545
Bsp19I	CCATGG	1 cut(s)	51
BspACI	CCGC	3 cut(s)	368, 414, 528
BspANI	GGCC	1 cut(s)	50
BspCNI	CTCAG	1 cut(s)	511
BspDI	ATCGAT	1 cut(s)	432
BspLI	GGNNCC	2 cut(s)	301, 313
BspPI	GGATC	2 cut(s)	245, 473
BspTNI	GGTCTC	1 cut(s)	95
BsrGI	TGTACA	1 cut(s)	456
BsrI	ACTGG	1 cut(s)	277
BssECI	CCNNGG	3 cut(s)	51, 132, 283
BssMI	GATC	4 cut(s)	250, 429, 478, 545
BssT1I	CCWWGG	1 cut(s)	51
Bst4CI	ACNGT	3 cut(s)	262, 643, 769
BstAUI	TGTACA	1 cut(s)	456
BstDEI	CTNAG	1 cut(s)	519
BstDSI	CCRYGG	1 cut(s)	51
BstF5I	GGATG	1 cut(s)	8
BstKTI	GATC	4 cut(s)	253, 432, 481, 548
BstMAI	GTCTC	2 cut(s)	95, 563
BstMBI	GATC	4 cut(s)	250, 429, 478, 545
BstMWI	GCNNNNNNNGC	1 cut(s)	56
BstNSI	RCATGY	1 cut(s)	202
BstSCI	CCNGG	1 cut(s)	282
BstV1I	GCAGC	1 cut(s)	327
BstV2I	GAAGAC	3 cut(s)	61, 386, 506
Bsu15I	ATCGAT	1 cut(s)	432
BsuRI	GGCC	1 cut(s)	50
BsuTUI	ATCGAT	1 cut(s)	432
BtgI	CCRYGG	1 cut(s)	51
BtgZI	GCGATG	1 cut(s)	13
BtrI	CACGTC	1 cut(s)	654
BtsCI	GGATG	1 cut(s)	8
BtsI	GCAGTG	3 cut(s)	88, 324, 623
BtsIMutI	CAGTG	6 cut(s)	88, 284, 324, 516, 623, 765
Cfr13I	GGNCC	1 cut(s)	37
ClaI	ATCGAT	1 cut(s)	432
Csp6I	GTAC	3 cut(s)	166, 457, 565
CviAII	CATG	4 cut(s)	52, 94, 199, 242
CviQI	GTAC	3 cut(s)	166, 457, 565
DdeI	CTNAG	1 cut(s)	519
DpnI	GATC	4 cut(s)	252, 431, 480, 547
DpnII	GATC	4 cut(s)	250, 429, 478, 545
EaeI	YGGCCR	1 cut(s)	48
Eco130I	CCWWGG	1 cut(s)	51
Eco24I	GRGCYC	1 cut(s)	164
Eco31I	GGTCTC	1 cut(s)	95
Eco47I	GGWCC	1 cut(s)	37
Eco57I	CTGAAG	1 cut(s)	159
Eco88I	CYCGRG	1 cut(s)	587
EcoT14I	CCWWGG	1 cut(s)	51
EcoT38I	GRGCYC	1 cut(s)	164
ErhI	CCWWGG	1 cut(s)	51
FaeI	CATG	4 cut(s)	55, 97, 202, 245
FatI	CATG	4 cut(s)	51, 93, 198, 241
FauI	CCCGC	1 cut(s)	361
FblI	GTMKAC	2 cut(s)	264, 622
Fnu4HI	GCNGC	1 cut(s)	341
FriOI	GRGCYC	1 cut(s)	164
Fsp4HI	GCNGC	1 cut(s)	341
GluI	GCNGC	1 cut(s)	341
GsuI	CTGGAG	1 cut(s)	260
HaeIII	GGCC	1 cut(s)	50
HapII	CCGG	1 cut(s)	283
Hin1II	CATG	4 cut(s)	55, 97, 202, 245
HindIII	AAGCTT	1 cut(s)	599
HinfI	GANTC	1 cut(s)	290
HpaII	CCGG	1 cut(s)	283
HphI	GGTGA	3 cut(s)	181, 257, 299
Hpy166II	GTNNAC	3 cut(s)	265, 623, 639
Hpy188I	TCNGA	3 cut(s)	133, 337, 550
Hpy188III	TCNNGA	4 cut(s)	400, 424, 589, 761
Hpy8I	GTNNAC	3 cut(s)	265, 623, 639
HpyAV	CCTTC	4 cut(s)	22, 134, 164, 698
HpyCH4III	ACNGT	3 cut(s)	262, 643, 769
HpyCH4IV	ACGT	1 cut(s)	653
HpyCH4V	TGCA	1 cut(s)	616
HpyF10VI	GCNNNNNNNGC	1 cut(s)	56
HpyF3I	CTNAG	1 cut(s)	519
HpySE526I	ACGT	1 cut(s)	653
Hsp92II	CATG	4 cut(s)	55, 97, 202, 245
Kzo9I	GATC	4 cut(s)	250, 429, 478, 545
LmnI	GCTCC	4 cut(s)	134, 279, 305, 676
LpnPI	CCDG	5 cut(s)	290, 296, 328, 495, 558
Lsp1109I	GCAGC	1 cut(s)	327
LweI	GCATC	1 cut(s)	36
MaeII	ACGT	1 cut(s)	653
MaeIII	GTNAC	3 cut(s)	245, 287, 731
MalI	GATC	4 cut(s)	252, 431, 480, 547
MboI	GATC	4 cut(s)	250, 429, 478, 545
MboII	GAAGA	7 cut(s)	61, 360, 386, 412, 439, 511, 604
MhlI	GDGCHC	1 cut(s)	164
MlsI	TGGCCA	1 cut(s)	50
MluNI	TGGCCA	1 cut(s)	50
MlyI	GAGTC	1 cut(s)	284
MmeI	TCCRAC	1 cut(s)	434
MnlI	CCTC	6 cut(s)	127, 188, 215, 329, 343, 701
Mox20I	TGGCCA	1 cut(s)	50
MroXI	GAANNNNTTC	1 cut(s)	446
MscI	TGGCCA	1 cut(s)	50
MseI	TTAA	1 cut(s)	42
Msp20I	TGGCCA	1 cut(s)	50
MspI	CCGG	1 cut(s)	283
MspR9I	CCNGG	1 cut(s)	284
MwoI	GCNNNNNNNGC	1 cut(s)	56
NciI	CCSGG	1 cut(s)	284
NcoI	CCATGG	1 cut(s)	51
NdeII	GATC	4 cut(s)	250, 429, 478, 545
NlaIII	CATG	4 cut(s)	55, 97, 202, 245
NlaIV	GGNNCC	2 cut(s)	301, 313
NmuCI	GTSAC	2 cut(s)	245, 287
NspI	RCATGY	1 cut(s)	202
PciI	ACATGT	1 cut(s)	198
PcsI	WCGNNNNNNNCGW	1 cut(s)	429
PdmI	GAANNNNTTC	1 cut(s)	446
Pfl23II	CGTACG	1 cut(s)	165
PkrI	GCNGC	1 cut(s)	342
PleI	GAGTC	1 cut(s)	284
PpsI	GAGTC	1 cut(s)	284
PscI	ACATGT	1 cut(s)	198
PspLI	CGTACG	1 cut(s)	165
PspN4I	GGNNCC	2 cut(s)	301, 313
PspPI	GGNCC	1 cut(s)	37
RsaI	GTAC	3 cut(s)	167, 458, 566
RsaNI	GTAC	3 cut(s)	166, 457, 565
SaqAI	TTAA	1 cut(s)	42
SatI	GCNGC	1 cut(s)	341
Sau3AI	GATC	4 cut(s)	250, 429, 478, 545
Sau96I	GGNCC	1 cut(s)	37
SchI	GAGTC	1 cut(s)	284
ScrFI	CCNGG	1 cut(s)	284
SduI	GDGCHC	1 cut(s)	164
SetI	ASST	8 cut(s)	180, 226, 335, 342, 525, 603, 656, 681
SfaNI	GCATC	1 cut(s)	36
SinI	GGWCC	1 cut(s)	37
SmlI	CTYRAG	1 cut(s)	398
SmoI	CTYRAG	1 cut(s)	398
SsiI	CCGC	3 cut(s)	368, 414, 528
StyD4I	CCNGG	1 cut(s)	282
StyI	CCWWGG	1 cut(s)	51
TaaI	ACNGT	3 cut(s)	262, 643, 769
TaiI	ACGT	1 cut(s)	656
TaqI	TCGA	3 cut(s)	423, 432, 772
TatI	WGTACW	1 cut(s)	456
Tru1I	TTAA	1 cut(s)	42
Tru9I	TTAA	1 cut(s)	42
TscAI	CASTG	6 cut(s)	88, 284, 331, 523, 623, 772
TseFI	GTSAC	2 cut(s)	245, 287
TseI	GCWGC	1 cut(s)	340
Tsp45I	GTSAC	2 cut(s)	245, 287
TspDTI	ATGAA	5 cut(s)	4, 110, 374, 596, 611
TspGWI	ACGGA	1 cut(s)	621
TspRI	CASTG	6 cut(s)	88, 284, 331, 523, 623, 772
VpaK11BI	GGWCC	1 cut(s)	37
XceI	RCATGY	1 cut(s)	202
XmiI	GTMKAC	2 cut(s)	264, 622
XmnI	GAANNNNTTC	1 cut(s)	446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.