BEST Arabidopsis thaliana protein match is
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G35170 AT4G17080 |
| fragaria_vesca | FvH4_5g20710 FvH4_5g20710 FvH4_7g09080 FvH4_7g09080 |
| malus_domestica | MD02G1221500.v1.1 MD04G1054000.v1.1 MD06G1044700.v1.1 MD07G1094800.v1.1 |
| prunus_persica | Prupe.2G119300_v2.0.a1 Prupe.5G052900_v2.0.a1 |
| pyrus_communis | pycom02g18710 pycom04g04710 pycom06g03800 pycom07g07810 |
| rosa_chinensis | RchiOBHm_Chr1g0344931 RchiOBHm_Chr7g0206481 |
| rosa_laevigata | RLG00000003311 RLG00000028866 |
| rosa_multiflora | Rmu_co8426337.1_g000001 Rmu_sc0000390.1_g000004 Rmu_sc0005065.1_g000042 Rmu_sc0010057.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00251490 Rroxscaffold_4G00309510 |
| rosa_rugosa | Rorug01G0175100 Rorug07G0097700 Rorug07G0097800 |
| rosa_samantha | Rh1AG193100 Rh1BG159400 Rh1CG178200 Rh1DG190200 Rh7AG229400 Rh7BG226000 Rh7CG244200 Rh7DG236400 |
| rosa_wichuraiana | Rw1G015890 Rw7G019740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 1346 |
| AccI | GTMKAC | 1 cut(s) | 1151 |
| AciI | CCGC | 3 cut(s) | 120, 632, 1346 |
| AclWI | GGATC | 5 cut(s) | 53, 256, 664, 1243, 1343 |
| AcsI | RAATTY | 1 cut(s) | 649 |
| AcuI | CTGAAG | 1 cut(s) | 29 |
| AfaI | GTAC | 1 cut(s) | 1200 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1185, 1422 |
| AgeI | ACCGGT | 1 cut(s) | 203 |
| AgsI | TTSAA | 2 cut(s) | 982, 1442 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1227 |
| AjnI | CCWGG | 1 cut(s) | 1231 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 648, 680 |
| AluBI | AGCT | 4 cut(s) | 331, 1115, 1298, 1379 |
| AluI | AGCT | 4 cut(s) | 331, 1115, 1298, 1379 |
| Alw21I | GWGCWC | 1 cut(s) | 593 |
| AlwI | GGATC | 5 cut(s) | 53, 256, 664, 1243, 1343 |
| AoxI | GGCC | 1 cut(s) | 1000 |
| ApeKI | GCWGC | 5 cut(s) | 1295, 1355, 1367, 1376, 1388 |
| ApoI | RAATTY | 1 cut(s) | 649 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 266, 298 |
| AseI | ATTAAT | 1 cut(s) | 38 |
| AsiGI | ACCGGT | 1 cut(s) | 203 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 718 |
| AspLEI | GCGC | 1 cut(s) | 233 |
| AspS9I | GGNCC | 1 cut(s) | 609 |
| AsuHPI | GGTGA | 4 cut(s) | 917, 1040, 1178, 1360 |
| AvaII | GGWCC | 1 cut(s) | 609 |
| BaeGI | GKGCMC | 1 cut(s) | 241 |
| BanII | GRGCYC | 1 cut(s) | 355 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1182, 1214 |
| BauI | CACGAG | 1 cut(s) | 1121 |
| BbsI | GAAGAC | 2 cut(s) | 276, 1197 |
| Bbv12I | GWGCWC | 1 cut(s) | 593 |
| BbvI | GCAGC | 5 cut(s) | 1307, 1342, 1379, 1388, 1400 |
| BccI | CCATC | 7 cut(s) | 277, 378, 773, 785, 950, 1345, 1424 |
| BceAI | ACGGC | 1 cut(s) | 1376 |
| BciT130I | CCWGG | 1 cut(s) | 1233 |
| BfaI | CTAG | 2 cut(s) | 452, 1380 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1397 |
| BisI | GCNGC | 5 cut(s) | 1296, 1356, 1368, 1377, 1389 |
| BlsI | GCNGC | 5 cut(s) | 1297, 1357, 1369, 1378, 1390 |
| Bme1390I | CCNGG | 1 cut(s) | 1233 |
| Bme18I | GGWCC | 1 cut(s) | 609 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1227 |
| BmgT120I | GGNCC | 1 cut(s) | 609 |
| BmrFI | CCNGG | 1 cut(s) | 1233 |
| BmsI | GCATC | 4 cut(s) | 13, 1021, 1053, 1261 |
| BpiI | GAAGAC | 2 cut(s) | 276, 1197 |
| BpuEI | CTTGAG | 1 cut(s) | 343 |
| Bsa29I | ATCGAT | 1 cut(s) | 251 |
| BsaBI | GATNNNNATC | 3 cut(s) | 57, 247, 1434 |
| BsaJI | CCNNGG | 3 cut(s) | 166, 928, 1003 |
| BsaWI | WCCGGW | 1 cut(s) | 203 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1185, 1422 |
| Bse118I | RCCGGY | 2 cut(s) | 203, 1178 |
| Bse1I | ACTGG | 1 cut(s) | 626 |
| Bse8I | GATNNNNATC | 3 cut(s) | 57, 247, 1434 |
| BseBI | CCWGG | 1 cut(s) | 1233 |
| BseCI | ATCGAT | 1 cut(s) | 251 |
| BseDI | CCNNGG | 3 cut(s) | 166, 928, 1003 |
| BseGI | GGATG | 3 cut(s) | 160, 480, 961 |
| BseJI | GATNNNNATC | 3 cut(s) | 57, 247, 1434 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1185, 1422 |
| BseMII | CTCAG | 5 cut(s) | 511, 596, 942, 1216, 1290 |
| BseNI | ACTGG | 1 cut(s) | 626 |
| BseSI | GKGCMC | 1 cut(s) | 241 |
| BseXI | GCAGC | 5 cut(s) | 1307, 1342, 1379, 1388, 1400 |
| BseYI | CCCAGC | 1 cut(s) | 1040 |
| BshFI | GGCC | 1 cut(s) | 1002 |
| BshTI | ACCGGT | 1 cut(s) | 203 |
| BshVI | ATCGAT | 1 cut(s) | 251 |
| BsiHKAI | GWGCWC | 1 cut(s) | 593 |
| BsiSI | CCGG | 2 cut(s) | 204, 1179 |
| BslFI | GGGAC | 1 cut(s) | 383 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1185, 1422 |
| BsmFI | GGGAC | 1 cut(s) | 383 |
| BsmI | GAATGC | 1 cut(s) | 1378 |
| BsnI | GGCC | 1 cut(s) | 1002 |
| Bsp1286I | GDGCHC | 3 cut(s) | 241, 355, 593 |
| Bsp143I | GATC | 8 cut(s) | 58, 242, 248, 489, 656, 1235, 1335, 1435 |
| Bsp19I | CCATGG | 1 cut(s) | 928 |
| BspACI | CCGC | 3 cut(s) | 120, 632, 1346 |
| BspANI | GGCC | 1 cut(s) | 1002 |
| BspCNI | CTCAG | 5 cut(s) | 510, 595, 943, 1215, 1291 |
| BspDI | ATCGAT | 1 cut(s) | 251 |
| BspPI | GGATC | 5 cut(s) | 53, 256, 664, 1243, 1343 |
| BspQI | GCTCTTC | 1 cut(s) | 513 |
| BsrBI | CCGCTC | 1 cut(s) | 1346 |
| BsrFI | RCCGGY | 2 cut(s) | 203, 1178 |
| BsrI | ACTGG | 1 cut(s) | 626 |
| BssAI | RCCGGY | 2 cut(s) | 203, 1178 |
| BssECI | CCNNGG | 3 cut(s) | 166, 928, 1003 |
| BssMI | GATC | 8 cut(s) | 58, 242, 248, 489, 656, 1235, 1335, 1435 |
| BssNAI | GTATAC | 1 cut(s) | 1152 |
| BssSI | CACGAG | 1 cut(s) | 1121 |
| BssT1I | CCWWGG | 3 cut(s) | 166, 928, 1003 |
| Bst1107I | GTATAC | 1 cut(s) | 1152 |
| Bst2BI | CACGAG | 1 cut(s) | 1121 |
| Bst2UI | CCWGG | 1 cut(s) | 1233 |
| Bst4CI | ACNGT | 2 cut(s) | 190, 1196 |
| Bst6I | CTCTTC | 3 cut(s) | 513, 580, 1323 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1373 |
| BstC8I | GCNNGC | 3 cut(s) | 544, 548, 1284 |
| BstDEI | CTNAG | 8 cut(s) | 150, 347, 497, 582, 854, 951, 1202, 1299 |
| BstDSI | CCRYGG | 1 cut(s) | 928 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1420 |
| BstF5I | GGATG | 3 cut(s) | 160, 480, 961 |
| BstHHI | GCGC | 1 cut(s) | 233 |
| BstKTI | GATC | 8 cut(s) | 61, 245, 251, 492, 659, 1238, 1338, 1438 |
| BstMBI | GATC | 8 cut(s) | 58, 242, 248, 489, 656, 1235, 1335, 1435 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 1292, 1304, 1352, 1364, 1373, 1376, 1385, 1397 |
| BstNI | CCWGG | 1 cut(s) | 1233 |
| BstSCI | CCNGG | 1 cut(s) | 1231 |
| BstSLI | GKGCMC | 1 cut(s) | 241 |
| BstV1I | GCAGC | 5 cut(s) | 1307, 1342, 1379, 1388, 1400 |
| BstV2I | GAAGAC | 2 cut(s) | 276, 1197 |
| BstX2I | RGATCY | 1 cut(s) | 656 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 935 |
| BstYI | RGATCY | 1 cut(s) | 656 |
| BstZ17I | GTATAC | 1 cut(s) | 1152 |
| Bsu15I | ATCGAT | 1 cut(s) | 251 |
| BsuRI | GGCC | 1 cut(s) | 1002 |
| BsuTUI | ATCGAT | 1 cut(s) | 251 |
| BtgI | CCRYGG | 1 cut(s) | 928 |
| BtsCI | GGATG | 3 cut(s) | 160, 480, 961 |
| BtsI | GCAGTG | 1 cut(s) | 929 |
| BtsIMutI | CAGTG | 2 cut(s) | 591, 929 |
| Cac8I | GCNNGC | 3 cut(s) | 544, 548, 1284 |
| CfoI | GCGC | 1 cut(s) | 233 |
| Cfr10I | RCCGGY | 2 cut(s) | 203, 1178 |
| Cfr13I | GGNCC | 1 cut(s) | 609 |
| ClaI | ATCGAT | 1 cut(s) | 251 |
| Csp6I | GTAC | 1 cut(s) | 1199 |
| CspAI | ACCGGT | 1 cut(s) | 203 |
| CviAII | CATG | 6 cut(s) | 810, 860, 929, 998, 1067, 1310 |
| CviQI | GTAC | 1 cut(s) | 1199 |
| DdeI | CTNAG | 8 cut(s) | 150, 347, 497, 582, 854, 951, 1202, 1299 |
| DpnI | GATC | 8 cut(s) | 60, 244, 250, 491, 658, 1237, 1337, 1437 |
| DpnII | GATC | 8 cut(s) | 58, 242, 248, 489, 656, 1235, 1335, 1435 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1227 |
| Eam1104I | CTCTTC | 3 cut(s) | 513, 580, 1323 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1227 |
| EarI | CTCTTC | 3 cut(s) | 513, 580, 1323 |
| Eco130I | CCWWGG | 3 cut(s) | 166, 928, 1003 |
| Eco24I | GRGCYC | 1 cut(s) | 355 |
| Eco32I | GATATC | 1 cut(s) | 196 |
| Eco47I | GGWCC | 1 cut(s) | 609 |
| Eco57I | CTGAAG | 1 cut(s) | 29 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1420 |
| EcoRII | CCWGG | 1 cut(s) | 1231 |
| EcoRV | GATATC | 1 cut(s) | 196 |
| EcoT14I | CCWWGG | 3 cut(s) | 166, 928, 1003 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 1068 |
| EcoT38I | GRGCYC | 1 cut(s) | 355 |
| ErhI | CCWWGG | 3 cut(s) | 166, 928, 1003 |
| FaeI | CATG | 6 cut(s) | 813, 863, 932, 1001, 1070, 1313 |
| FaqI | GGGAC | 1 cut(s) | 383 |
| FatI | CATG | 6 cut(s) | 809, 859, 928, 997, 1066, 1309 |
| FblI | GTMKAC | 1 cut(s) | 1151 |
| Fnu4HI | GCNGC | 5 cut(s) | 1296, 1356, 1368, 1377, 1389 |
| FokI | GGATG | 3 cut(s) | 147, 467, 968 |
| FriOI | GRGCYC | 1 cut(s) | 355 |
| Fsp4HI | GCNGC | 5 cut(s) | 1296, 1356, 1368, 1377, 1389 |
| FspBI | CTAG | 2 cut(s) | 452, 1380 |
| GlaI | GCGC | 1 cut(s) | 232 |
| GluI | GCNGC | 5 cut(s) | 1296, 1356, 1368, 1377, 1389 |
| GsaI | CCCAGC | 1 cut(s) | 1044 |
| HaeIII | GGCC | 1 cut(s) | 1002 |
| HapII | CCGG | 2 cut(s) | 204, 1179 |
| HhaI | GCGC | 1 cut(s) | 233 |
| Hin1II | CATG | 6 cut(s) | 813, 863, 932, 1001, 1070, 1313 |
| Hin6I | GCGC | 1 cut(s) | 231 |
| HinP1I | GCGC | 1 cut(s) | 231 |
| HincII | GTYRAC | 1 cut(s) | 211 |
| HindII | GTYRAC | 1 cut(s) | 211 |
| HindIII | AAGCTT | 1 cut(s) | 329 |
| HinfI | GANTC | 5 cut(s) | 53, 82, 175, 501, 570 |
| HpaII | CCGG | 2 cut(s) | 204, 1179 |
| HphI | GGTGA | 4 cut(s) | 917, 1040, 1178, 1360 |
| Hpy166II | GTNNAC | 3 cut(s) | 211, 1152, 1199 |
| Hpy188III | TCNNGA | 9 cut(s) | 43, 246, 322, 487, 654, 723, 1159, 1339, 1439 |
| Hpy8I | GTNNAC | 3 cut(s) | 211, 1152, 1199 |
| Hpy99I | CGWCG | 2 cut(s) | 36, 225 |
| HpyAV | CCTTC | 7 cut(s) | 455, 487, 689, 758, 1103, 1125, 1390 |
| HpyCH4III | ACNGT | 2 cut(s) | 190, 1196 |
| HpyCH4IV | ACGT | 1 cut(s) | 878 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 1055, 1066, 1358, 1376 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 1292, 1304, 1352, 1364, 1373, 1376, 1385, 1397 |
| HpyF3I | CTNAG | 8 cut(s) | 150, 347, 497, 582, 854, 951, 1202, 1299 |
| HpySE526I | ACGT | 1 cut(s) | 878 |
| Hsp92II | CATG | 6 cut(s) | 813, 863, 932, 1001, 1070, 1313 |
| HspAI | GCGC | 1 cut(s) | 231 |
| Kzo9I | GATC | 8 cut(s) | 58, 242, 248, 489, 656, 1235, 1335, 1435 |
| LguI | GCTCTTC | 1 cut(s) | 513 |
| LmnI | GCTCC | 1 cut(s) | 1112 |
| Lsp1109I | GCAGC | 5 cut(s) | 1307, 1342, 1379, 1388, 1400 |
| LweI | GCATC | 4 cut(s) | 13, 1021, 1053, 1261 |
| MaeI | CTAG | 2 cut(s) | 452, 1380 |
| MaeII | ACGT | 1 cut(s) | 878 |
| MaeIII | GTNAC | 2 cut(s) | 22, 1010 |
| MalI | GATC | 8 cut(s) | 60, 244, 250, 491, 658, 1237, 1337, 1437 |
| MbiI | CCGCTC | 1 cut(s) | 1346 |
| MboI | GATC | 8 cut(s) | 58, 242, 248, 489, 656, 1235, 1335, 1435 |
| MfeI | CAATTG | 1 cut(s) | 1447 |
| MflI | RGATCY | 1 cut(s) | 656 |
| MhlI | GDGCHC | 3 cut(s) | 241, 355, 593 |
| MluCI | AATT | 4 cut(s) | 525, 649, 864, 1447 |
| MmeI | TCCRAC | 1 cut(s) | 244 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 1068 |
| MroXI | GAANNNNTTC | 1 cut(s) | 718 |
| MseI | TTAA | 2 cut(s) | 38, 518 |
| MslI | CAYNNNNRTG | 3 cut(s) | 933, 1104, 1425 |
| MspA1I | CMGCKG | 1 cut(s) | 1298 |
| MspI | CCGG | 2 cut(s) | 204, 1179 |
| MspR9I | CCNGG | 1 cut(s) | 1233 |
| MunI | CAATTG | 1 cut(s) | 1447 |
| Mva1269I | GAATGC | 1 cut(s) | 1378 |
| MvaI | CCWGG | 1 cut(s) | 1233 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 1292, 1304, 1352, 1364, 1373, 1376, 1385, 1397 |
| NcoI | CCATGG | 1 cut(s) | 928 |
| NdeII | GATC | 8 cut(s) | 58, 242, 248, 489, 656, 1235, 1335, 1435 |
| NlaIII | CATG | 6 cut(s) | 813, 863, 932, 1001, 1070, 1313 |
| NmeAIII | GCCGAG | 1 cut(s) | 612 |
| NsiI | ATGCAT | 2 cut(s) | 6, 1068 |
| PciSI | GCTCTTC | 1 cut(s) | 513 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 48 |
| PctI | GAATGC | 1 cut(s) | 1378 |
| PdmI | GAANNNNTTC | 1 cut(s) | 718 |
| PfeI | GAWTC | 5 cut(s) | 53, 82, 175, 501, 570 |
| PfoI | TCCNGGA | 1 cut(s) | 1231 |
| PinAI | ACCGGT | 1 cut(s) | 203 |
| PkrI | GCNGC | 5 cut(s) | 1297, 1357, 1369, 1378, 1390 |
| PshBI | ATTAAT | 1 cut(s) | 38 |
| Psp6I | CCWGG | 1 cut(s) | 1231 |
| PspFI | CCCAGC | 1 cut(s) | 1040 |
| PspGI | CCWGG | 1 cut(s) | 1231 |
| PspPI | GGNCC | 1 cut(s) | 609 |
| PsuI | RGATCY | 1 cut(s) | 656 |
| PvuII | CAGCTG | 1 cut(s) | 1298 |
| RsaI | GTAC | 1 cut(s) | 1200 |
| RsaNI | GTAC | 1 cut(s) | 1199 |
| RseI | CAYNNNNRTG | 3 cut(s) | 933, 1104, 1425 |
| SapI | GCTCTTC | 1 cut(s) | 513 |
| SaqAI | TTAA | 2 cut(s) | 38, 518 |
| SatI | GCNGC | 5 cut(s) | 1296, 1356, 1368, 1377, 1389 |
| Sau3AI | GATC | 8 cut(s) | 58, 242, 248, 489, 656, 1235, 1335, 1435 |
| Sau96I | GGNCC | 1 cut(s) | 609 |
| ScrFI | CCNGG | 1 cut(s) | 1233 |
| SduI | GDGCHC | 3 cut(s) | 241, 355, 593 |
| SfaNI | GCATC | 4 cut(s) | 13, 1021, 1053, 1261 |
| SinI | GGWCC | 1 cut(s) | 609 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 933, 1104, 1425 |
| SmlI | CTYRAG | 1 cut(s) | 322 |
| SmoI | CTYRAG | 1 cut(s) | 322 |
| Sse9I | AATT | 4 cut(s) | 525, 649, 864, 1447 |
| SsiI | CCGC | 3 cut(s) | 120, 632, 1346 |
| SspMI | CTAG | 2 cut(s) | 452, 1380 |
| StyD4I | CCNGG | 1 cut(s) | 1231 |
| StyI | CCWWGG | 3 cut(s) | 166, 928, 1003 |
| TaaI | ACNGT | 2 cut(s) | 190, 1196 |
| TaiI | ACGT | 1 cut(s) | 881 |
| TaqI | TCGA | 5 cut(s) | 115, 251, 488, 620, 832 |
| TaqII | GACCGA | 1 cut(s) | 612 |
| TasI | AATT | 4 cut(s) | 525, 649, 864, 1447 |
| TatI | WGTACW | 1 cut(s) | 1198 |
| TfiI | GAWTC | 5 cut(s) | 53, 82, 175, 501, 570 |
| Tru1I | TTAA | 2 cut(s) | 38, 518 |
| Tru9I | TTAA | 2 cut(s) | 38, 518 |
| TscAI | CASTG | 2 cut(s) | 598, 929 |
| TseI | GCWGC | 5 cut(s) | 1295, 1355, 1367, 1376, 1388 |
| TspDTI | ATGAA | 8 cut(s) | 74, 249, 469, 695, 708, 764, 1122, 1326 |
| TspGWI | ACGGA | 2 cut(s) | 987, 1217 |
| TspRI | CASTG | 2 cut(s) | 598, 929 |
| VpaK11BI | GGWCC | 1 cut(s) | 609 |
| VspI | ATTAAT | 1 cut(s) | 38 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1420 |
| XapI | RAATTY | 1 cut(s) | 649 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1022 |
| XmiI | GTMKAC | 1 cut(s) | 1151 |
| XmnI | GAANNNNTTC | 1 cut(s) | 718 |
| XspI | CTAG | 2 cut(s) | 452, 1380 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 1068 |