MD02G1221500.v1.1

Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
25841526 .. 25844893
3368 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1221500.v1.1.491

Sequence Viewer

Length: 1467 bp
ATGCATCAGAAGAAATCTGAAGCTCAGATCGGAAAAGAAAGCATTGGCGTCTCTTCCGATTACAACCCAGTCTCAGCCTCAGCCTCAGCCTCAGCCGCCGCCGCACCACCGCCATCGGCGCCTTCTTCTTCCTTCTCTTCCATTTCCGACCAAGTCAATCACATCACCCAATTCCCTCGCTACCCATCTCAACATTTGCCCCACCATGACCCCCCAATCCCTCAAACCACACCTTACAAGCGACCCCTTTTGACCCAAACCCCCTCCTCCCTCTCCAAATCCCCGACCCTCTACAAATTCCCACCTCCTCCGCAAAACCCACCTCTCTTTTCCCCTTCTCTCGCTGCCAAATCGGCCTTCTTTCGCCTCCTCCGCCGCGTTCACCTCCTCCGCCGCCGCCTCCTACTGCTCTCTTTGCCCTTCTTTTACTTCCTGGTCTCTCACCCTAGCCACTCTTTCTTCCTTGACTTCCTCTCCGCCTTTGCTTTCTCCGCCGCATTGCTCTTCTCCCTCAATCTCGCCCTTCCCCGCCTCCCCTCCATACGGCTGTTCCTGGCCAGGTCTTTCCCAAGCAAGCTCAAGACCTCCTCTAGCCCGCCGTTGCCCGTGTTTTGGTCAATCGGGTCGCGGCCGAAAGCCGAAAAGAAAGGGAGTTCCGGGTGTTGGGTTGAGGTTTACAGCAACGGTGACGTGTATGAGGGTGAATTTCATAAAGGAAAGTGTTCAGGAAGTGGGGTGTATTACTATTACATGAGCGGGAGGTTTGAGGGGGATTGGGTTGATGGGAAATATGATGGTTATGGTGTCGAGACGTGGGCGAGAGGAAGCCGGTACCGCGGGCAGTATAGGCAGGGCCTGAGGCATGGTTTCGGGGTGTATAGGTTCTACACTGGAGATGTTTATGCAGGGGAATGGTCTAATGGGCAGAGTCATGGGTGTGGAATCCATACCTGTGAGGATGGGAGTAGATATATTGGGGAGTTCAAGTGGGGTGTCAAGCATGGCCTTGGTCACTACCATTTCAGAAATGGTGACACGTATGCTGGAGAATATTTTGCGGACAAAATGCATGGGTTTGGGGTCTATCGATTTGCAAATGGGCATGGGTATGAGGGAGCTTGGCATGAGGGTAGAAGGCAAGGGCTTGGTATGTACACATATAGAAATGGGGAAACTCAAGCTGGTCACTGGCAAAATGGAGTCCTTGATGTTCCAAGCACACAGAATGCAACTTCTCCTGTATCTCCCATAGCTGTTAATCATTCCAAAGTACTTTATGCGGTTCAGGAAGCGAGAATAGTGTCCGAGAAAGCCTATGATGTAGCAAAGGTGGATGAAAGAGTGAACAGGGCCGTAACAGCAGCTAATAGGGCAGCAAATGCAGCTAGAGTAGCAGCGGTGAAAGCTGTCCAGAAACAAATGCAGCATAATACTAGCAGTGACCACATGCCAATTCAAATTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

489

Amino Acids

54.19

Weight (kDa)

9.61

Isoelectric Point (pI)

44.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MORN PF02493 255 - 277 8e-06 MORN repeat
MORN PF02493 278 - 300 6.8e-06 MORN repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 831
AccB1I GGYRCC 2 cut(s) 118, 831
AccBSI CCGCTC 1 cut(s) 756
AccII CGCG 3 cut(s) 378, 628, 837
AcoI YGGCCR 2 cut(s) 555, 629
AcsI RAATTY 2 cut(s) 296, 704
AcuI CTGAAG 1 cut(s) 39
AcyI GRCGYC 2 cut(s) 48, 119
AfaI GTAC 3 cut(s) 833, 1154, 1272
AfiI CCNNNNNNNGG 3 cut(s) 543, 612, 663
AflIII ACRYGT 2 cut(s) 690, 1035
AgsI TTSAA 2 cut(s) 985, 1457
AjiI CACGTC 2 cut(s) 691, 813
AjnI CCWGG 3 cut(s) 432, 552, 557
AjuI GAANNNNNNNTTGG 2 cut(s) 341, 373
AluBI AGCT 8 cut(s) 23, 577, 1118, 1181, 1253, 1364, 1385, 1406
AluI AGCT 8 cut(s) 23, 577, 1118, 1181, 1253, 1364, 1385, 1406
Alw26I GTCTC 4 cut(s) 55, 76, 442, 803
AlwNI CAGNNNCTG 1 cut(s) 856
AoxI GGCC 6 cut(s) 354, 555, 629, 853, 1003, 1350
ApeKI GCWGC 6 cut(s) 344, 1361, 1373, 1382, 1394, 1423
ApoI RAATTY 2 cut(s) 296, 704
Asp700I GAANNNNTTC 1 cut(s) 721
Asp718I GGTACC 1 cut(s) 831
AspLEI GCGC 1 cut(s) 121
AspS9I GGNCC 2 cut(s) 853, 1350
AsuC2I CCSGG 1 cut(s) 658
AsuHPI GGTGA 7 cut(s) 157, 374, 434, 698, 713, 1043, 1411
AxyI CCTNAGG 1 cut(s) 857
BalI TGGCCA 1 cut(s) 557
BanI GGYRCC 2 cut(s) 118, 831
BbvCI CCTCAGC 3 cut(s) 79, 85, 91
BbvI GCAGC 6 cut(s) 331, 1373, 1385, 1394, 1406, 1435
BccI CCATC 5 cut(s) 121, 193, 776, 788, 953
BceAI ACGGC 3 cut(s) 560, 583, 1337
BciT130I CCWGG 3 cut(s) 434, 554, 559
BcnI CCSGG 1 cut(s) 658
BcoDI GTCTC 4 cut(s) 55, 76, 442, 803
BfaI CTAG 4 cut(s) 447, 591, 1386, 1434
BfoI RGCGCY 1 cut(s) 122
BglI GCCNNNNNGGC 1 cut(s) 353
BmcAI AGTACT 1 cut(s) 1272
Bme1390I CCNGG 4 cut(s) 434, 554, 559, 658
BmgBI CACGTC 2 cut(s) 691, 813
BmgT120I GGNCC 2 cut(s) 853, 1350
BmiI GGNNCC 2 cut(s) 120, 833
BmrFI CCNGG 4 cut(s) 434, 554, 559, 658
BmrI ACTGGG 1 cut(s) 62
BmsI GCATC 1 cut(s) 13
BmuI ACTGGG 1 cut(s) 62
BpmI CTGGAG 2 cut(s) 912, 1065
Bpu10I CCTNAGC 3 cut(s) 79, 85, 91
BpuEI CTTGAG 2 cut(s) 563, 1161
BpuMI CCSGG 1 cut(s) 658
Bsa29I ATCGAT 1 cut(s) 1087
BsaAI YACGTR 1 cut(s) 1038
BsaHI GRCGYC 2 cut(s) 48, 119
BsaI GGTCTC 1 cut(s) 442
BsaJI CCNNGG 2 cut(s) 835, 1006
BsaXI ACNNNNNCTCC 4 cut(s) 458, 488, 971, 1001
Bsc4I CCNNNNNNNGG 3 cut(s) 543, 612, 663
Bse118I RCCGGY 1 cut(s) 828
Bse1I ACTGG 3 cut(s) 68, 895, 1193
Bse21I CCTNAGG 1 cut(s) 857
Bse3DI GCAATG 1 cut(s) 497
BseBI CCWGG 3 cut(s) 434, 554, 559
BseCI ATCGAT 1 cut(s) 1087
BseDI CCNNGG 2 cut(s) 835, 1006
BseGI GGATG 2 cut(s) 964, 1339
BseLI CCNNNNNNNGG 3 cut(s) 543, 612, 663
BseMI GCAATG 1 cut(s) 497
BseMII CTCAG 6 cut(s) 38, 87, 93, 99, 105, 848
BseNI ACTGG 3 cut(s) 68, 895, 1193
BseRI GAGGAG 5 cut(s) 256, 297, 359, 377, 577
BseX3I CGGCCG 1 cut(s) 629
BseXI GCAGC 6 cut(s) 331, 1373, 1385, 1394, 1406, 1435
Bsh1236I CGCG 3 cut(s) 378, 628, 837
Bsh1285I CGRYCG 1 cut(s) 632
BshFI GGCC 6 cut(s) 356, 557, 631, 855, 1005, 1352
BshNI GGYRCC 2 cut(s) 118, 831
BshVI ATCGAT 1 cut(s) 1087
BsiEI CGRYCG 1 cut(s) 632
BsiSI CCGG 2 cut(s) 657, 829
BslI CCNNNNNNNGG 3 cut(s) 543, 612, 663
BsmAI GTCTC 4 cut(s) 55, 76, 442, 803
BsmBI CGTCTC 2 cut(s) 55, 803
BsmI GAATGC 1 cut(s) 1231
BsnI GGCC 6 cut(s) 356, 557, 631, 855, 1005, 1352
Bso31I GGTCTC 1 cut(s) 442
Bsp1407I TGTACA 1 cut(s) 1152
Bsp143I GATC 1 cut(s) 27
BspANI GGCC 6 cut(s) 356, 557, 631, 855, 1005, 1352
BspCNI CTCAG 6 cut(s) 37, 86, 92, 98, 104, 849
BspDI ATCGAT 1 cut(s) 1087
BspFNI CGCG 3 cut(s) 378, 628, 837
BspLI GGNNCC 2 cut(s) 120, 833
BspQI GCTCTTC 1 cut(s) 509
BspT107I GGYRCC 2 cut(s) 118, 831
BspTNI GGTCTC 1 cut(s) 442
BsrBI CCGCTC 1 cut(s) 756
BsrDI GCAATG 1 cut(s) 497
BsrFI RCCGGY 1 cut(s) 828
BsrGI TGTACA 1 cut(s) 1152
BsrI ACTGG 3 cut(s) 68, 895, 1193
BssAI RCCGGY 1 cut(s) 828
BssECI CCNNGG 2 cut(s) 835, 1006
BssMI GATC 1 cut(s) 27
BssNI GRCGYC 2 cut(s) 48, 119
BssT1I CCWWGG 1 cut(s) 1006
Bst2UI CCWGG 3 cut(s) 434, 554, 559
Bst4CI ACNGT 1 cut(s) 686
Bst6I CTCTTC 3 cut(s) 58, 142, 509
BstACI GRCGYC 2 cut(s) 48, 119
BstAPI GCANNNNNTGC 1 cut(s) 1379
BstAUI TGTACA 1 cut(s) 1152
BstBAI YACGTR 1 cut(s) 1038
BstC8I GCNNGC 3 cut(s) 575, 596, 839
BstDEI CTNAG 6 cut(s) 24, 73, 79, 85, 91, 857
BstDSI CCRYGG 1 cut(s) 835
BstF5I GGATG 2 cut(s) 964, 1339
BstFNI CGCG 3 cut(s) 378, 628, 837
BstH2I RGCGCY 1 cut(s) 122
BstHHI GCGC 1 cut(s) 121
BstKTI GATC 1 cut(s) 30
BstMAI GTCTC 4 cut(s) 55, 76, 442, 803
BstMBI GATC 1 cut(s) 27
BstMCI CGRYCG 1 cut(s) 632
BstNI CCWGG 3 cut(s) 434, 554, 559
BstNSI RCATGY 1 cut(s) 1450
BstSCI CCNGG 4 cut(s) 432, 552, 557, 656
BstUI CGCG 3 cut(s) 378, 628, 837
BstV1I GCAGC 6 cut(s) 331, 1373, 1385, 1394, 1406, 1435
BstZI CGGCCG 1 cut(s) 629
Bsu15I ATCGAT 1 cut(s) 1087
Bsu36I CCTNAGG 1 cut(s) 857
BsuRI GGCC 6 cut(s) 356, 557, 631, 855, 1005, 1352
BsuTUI ATCGAT 1 cut(s) 1087
BtgI CCRYGG 1 cut(s) 835
BtrI CACGTC 2 cut(s) 691, 813
BtsCI GGATG 2 cut(s) 964, 1339
BtsI GCAGTG 1 cut(s) 1444
BtsIMutI CAGTG 3 cut(s) 888, 1186, 1444
Cac8I GCNNGC 3 cut(s) 575, 596, 839
CaiI CAGNNNCTG 1 cut(s) 856
CfoI GCGC 1 cut(s) 121
Cfr10I RCCGGY 1 cut(s) 828
Cfr13I GGNCC 2 cut(s) 853, 1350
Cfr42I CCGCGG 1 cut(s) 838
ClaI ATCGAT 1 cut(s) 1087
CseI GACGC 1 cut(s) 37
Csp6I GTAC 3 cut(s) 832, 1153, 1271
CviAII CATG 9 cut(s) 206, 751, 863, 932, 1001, 1070, 1103, 1124, 1447
CviQI GTAC 3 cut(s) 832, 1153, 1271
DdeI CTNAG 6 cut(s) 24, 73, 79, 85, 91, 857
DinI GGCGCC 1 cut(s) 120
DpnI GATC 1 cut(s) 29
DpnII GATC 1 cut(s) 27
EaeI YGGCCR 2 cut(s) 555, 629
EagI CGGCCG 1 cut(s) 629
Eam1104I CTCTTC 3 cut(s) 58, 142, 509
EarI CTCTTC 3 cut(s) 58, 142, 509
EciI GGCGGA 4 cut(s) 362, 380, 466, 481
EclXI CGGCCG 1 cut(s) 629
Eco130I CCWWGG 1 cut(s) 1006
Eco31I GGTCTC 1 cut(s) 442
Eco52I CGGCCG 1 cut(s) 629
Eco57I CTGAAG 1 cut(s) 39
Eco81I CCTNAGG 1 cut(s) 857
EcoO109I RGGNCCY 1 cut(s) 853
EcoRII CCWGG 3 cut(s) 432, 552, 557
EcoT14I CCWWGG 1 cut(s) 1006
EcoT22I ATGCAT 2 cut(s) 6, 1071
EgeI GGCGCC 1 cut(s) 120
EheI GGCGCC 1 cut(s) 120
ErhI CCWWGG 1 cut(s) 1006
Esp3I CGTCTC 2 cut(s) 55, 803
FaeI CATG 9 cut(s) 209, 754, 866, 935, 1004, 1073, 1106, 1127, 1450
FatI CATG 9 cut(s) 205, 750, 862, 931, 1000, 1069, 1102, 1123, 1446
FauI CCCGC 4 cut(s) 536, 603, 749, 830
FokI GGATG 2 cut(s) 971, 1346
FspBI CTAG 4 cut(s) 447, 591, 1386, 1434
GlaI GCGC 1 cut(s) 120
GsuI CTGGAG 2 cut(s) 912, 1065
HaeII RGCGCY 1 cut(s) 122
HaeIII GGCC 6 cut(s) 356, 557, 631, 855, 1005, 1352
HapII CCGG 2 cut(s) 657, 829
HgaI GACGC 1 cut(s) 37
HhaI GCGC 1 cut(s) 121
Hin1I GRCGYC 2 cut(s) 48, 119
Hin1II CATG 9 cut(s) 209, 754, 866, 935, 1004, 1073, 1106, 1127, 1450
Hin6I GCGC 1 cut(s) 119
HinP1I GCGC 1 cut(s) 119
HinfI GANTC 3 cut(s) 928, 942, 1200
HpaII CCGG 2 cut(s) 657, 829
HphI GGTGA 7 cut(s) 157, 374, 434, 698, 713, 1043, 1411
Hpy166II GTNNAC 4 cut(s) 382, 676, 1155, 1345
Hpy188I TCNGA 8 cut(s) 9, 19, 27, 32, 58, 148, 1025, 1306
Hpy188III TCNNGA 5 cut(s) 580, 726, 808, 1286, 1411
Hpy8I GTNNAC 4 cut(s) 382, 676, 1155, 1345
HpyAV CCTTC 7 cut(s) 132, 142, 345, 367, 430, 533, 1128
HpyCH4III ACNGT 1 cut(s) 686
HpyCH4IV ACGT 3 cut(s) 690, 812, 1037
HpyCH4V TGCA 7 cut(s) 4, 905, 1069, 1094, 1229, 1382, 1423
HpyF3I CTNAG 6 cut(s) 24, 73, 79, 85, 91, 857
HpySE526I ACGT 3 cut(s) 690, 812, 1037
Hsp92I GRCGYC 2 cut(s) 48, 119
Hsp92II CATG 9 cut(s) 209, 754, 866, 935, 1004, 1073, 1106, 1127, 1450
HspAI GCGC 1 cut(s) 119
KasI GGCGCC 1 cut(s) 118
KpnI GGTACC 1 cut(s) 835
KspI CCGCGG 1 cut(s) 838
Kzo9I GATC 1 cut(s) 27
LguI GCTCTTC 1 cut(s) 509
LmnI GCTCC 1 cut(s) 1115
Lsp1109I GCAGC 6 cut(s) 331, 1373, 1385, 1394, 1406, 1435
LweI GCATC 1 cut(s) 13
MaeI CTAG 4 cut(s) 447, 591, 1386, 1434
MaeII ACGT 3 cut(s) 690, 812, 1037
MaeIII GTNAC 6 cut(s) 686, 1010, 1031, 1184, 1354, 1439
MalI GATC 1 cut(s) 29
MbiI CCGCTC 1 cut(s) 756
MboI GATC 1 cut(s) 27
MboII GAAGA 7 cut(s) 22, 45, 117, 120, 129, 451, 496
MlsI TGGCCA 1 cut(s) 557
MluCI AATT 5 cut(s) 170, 296, 704, 1452, 1458
MluNI TGGCCA 1 cut(s) 557
Mly113I GGCGCC 1 cut(s) 119
MlyI GAGTC 2 cut(s) 937, 1209
MmeI TCCRAC 1 cut(s) 171
Mox20I TGGCCA 1 cut(s) 557
Mph1103I ATGCAT 2 cut(s) 6, 1071
MroXI GAANNNNTTC 1 cut(s) 721
MscI TGGCCA 1 cut(s) 557
MseI TTAA 1 cut(s) 1257
MslI CAYNNNNRTG 3 cut(s) 936, 951, 1107
Msp20I TGGCCA 1 cut(s) 557
MspA1I CMGCKG 2 cut(s) 837, 1397
MspI CCGG 2 cut(s) 657, 829
MspR9I CCNGG 4 cut(s) 434, 554, 559, 658
Mva1269I GAATGC 1 cut(s) 1231
MvaI CCWGG 3 cut(s) 434, 554, 559
MvnI CGCG 3 cut(s) 378, 628, 837
NarI GGCGCC 1 cut(s) 119
NciI CCSGG 1 cut(s) 658
NdeII GATC 1 cut(s) 27
NlaIII CATG 9 cut(s) 209, 754, 866, 935, 1004, 1073, 1106, 1127, 1450
NlaIV GGNNCC 2 cut(s) 120, 833
NmuCI GTSAC 5 cut(s) 686, 1010, 1031, 1184, 1439
NsiI ATGCAT 2 cut(s) 6, 1071
NspI RCATGY 1 cut(s) 1450
PciSI GCTCTTC 1 cut(s) 509
PctI GAATGC 1 cut(s) 1231
PdmI GAANNNNTTC 1 cut(s) 721
PfeI GAWTC 1 cut(s) 942
PflFI GACNNNGTC 1 cut(s) 152
PleI GAGTC 2 cut(s) 936, 1208
PluTI GGCGCC 1 cut(s) 122
PpsI GAGTC 2 cut(s) 936, 1208
Ppu21I YACGTR 1 cut(s) 1038
Psp6I CCWGG 3 cut(s) 432, 552, 557
PspGI CCWGG 3 cut(s) 432, 552, 557
PspN4I GGNNCC 2 cut(s) 120, 833
PspPI GGNCC 2 cut(s) 853, 1350
PstNI CAGNNNCTG 1 cut(s) 856
PsyI GACNNNGTC 1 cut(s) 152
RsaI GTAC 3 cut(s) 833, 1154, 1272
RsaNI GTAC 3 cut(s) 832, 1153, 1271
RseI CAYNNNNRTG 3 cut(s) 936, 951, 1107
SacII CCGCGG 1 cut(s) 838
SapI GCTCTTC 1 cut(s) 509
SaqAI TTAA 1 cut(s) 1257
Sau3AI GATC 1 cut(s) 27
Sau96I GGNCC 2 cut(s) 853, 1350
ScaI AGTACT 1 cut(s) 1272
SchI GAGTC 2 cut(s) 937, 1209
ScrFI CCNGG 4 cut(s) 434, 554, 559, 658
SfaNI GCATC 1 cut(s) 13
SfoI GGCGCC 1 cut(s) 120
Sfr303I CCGCGG 1 cut(s) 838
SgrBI CCGCGG 1 cut(s) 838
SmiMI CAYNNNNRTG 3 cut(s) 936, 951, 1107
SmlI CTYRAG 2 cut(s) 578, 1176
SmoI CTYRAG 2 cut(s) 578, 1176
Sse9I AATT 5 cut(s) 170, 296, 704, 1452, 1458
SspDI GGCGCC 1 cut(s) 118
SspI AATATT 1 cut(s) 1052
SspMI CTAG 4 cut(s) 447, 591, 1386, 1434
StyD4I CCNGG 4 cut(s) 432, 552, 557, 656
StyI CCWWGG 1 cut(s) 1006
TaaI ACNGT 1 cut(s) 686
TaiI ACGT 3 cut(s) 693, 815, 1040
TaqI TCGA 2 cut(s) 807, 1087
TasI AATT 5 cut(s) 170, 296, 704, 1452, 1458
TatI WGTACW 2 cut(s) 1152, 1270
TauI GCSGC 8 cut(s) 98, 101, 104, 378, 396, 399, 497, 631
TfiI GAWTC 1 cut(s) 942
Tru1I TTAA 1 cut(s) 1257
Tru9I TTAA 1 cut(s) 1257
TscAI CASTG 3 cut(s) 895, 1193, 1444
TseFI GTSAC 5 cut(s) 686, 1010, 1031, 1184, 1439
TseI GCWGC 6 cut(s) 344, 1361, 1373, 1382, 1394, 1423
Tsp45I GTSAC 5 cut(s) 686, 1010, 1031, 1184, 1439
TspDTI ATGAA 2 cut(s) 698, 1350
TspRI CASTG 3 cut(s) 895, 1193, 1444
Tth111I GACNNNGTC 1 cut(s) 152
XapI RAATTY 2 cut(s) 296, 704
XceI RCATGY 1 cut(s) 1450
XcmI CCANNNNNNNNNTGG 1 cut(s) 1025
XmnI GAANNNNTTC 1 cut(s) 721
XspI CTAG 4 cut(s) 447, 591, 1386, 1434
ZrmI AGTACT 1 cut(s) 1272
Zsp2I ATGCAT 2 cut(s) 6, 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.