Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002779

Physical Location & Seq

Genomic Coordinates Reverse (-)

17712065 .. 17715816

Gene Structure 3752 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G119300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1449 bp

ATGCATCATAAGAAATCAGAAGCTCAGATCGGAAAAGAAAGCATTGGCGTCTCTTCCGATTTCAATCCAATCTCAGGCGCAGCACCACCACCGCCACCTTCTTTCTCTTCTTCAATTTCGCACCAATTCAACCACATCTCTCAGTTTCCTCACTACCCATCTCAACATTTGCCCCAAAATGACCCTCCAATCCCTCAAACCACACCTTACAAGCGACCCCTTTTGACCCAAACCCACTCCTCTCTCTCCAAATCCCCAACCCTTTACAAATTCCCACCGCCCCCGAAGAACCCACCTCTCTTTTCCCCTTCTCTTGCCGCCAAAACCGCCTTTTTTCGCCTCATCCGCCGCGTCAACCGCCTCCGCCGCCTCCTCCTATTGCTCTGTCTGCCCTTCTTTTACTTCTTGGTCTCTCACCCAAGCCACTCTTTCTTTCTTGACTTTCTCTCCGCTTTTGCTTTCTCTTCTGCATTGCTGTTCTCGCTCAATCTCGCCCTCCCTCGCCTCCCATCAATACGGCTTTTCCTAGCCAGGTCTTTCCCAATCAAGCTTAAGACCTCGTCTTCCTTGTCTAGACCGCCTTTGCCGGTGTTTTGGTCAATTGGGTCTCGCCCAAAAGCCGAGAACAGAGGAAATTCAGGGTGTTGGGTTCAGGTTTATGGCAACGGAGACGTGTATGAGGGTGAGTTTCACAAGGGACAGTGTTCAGGAAGTGGGGTGTATTACTATTACATGAGTGGGAGGTATGAGGGAGACTGGGTTGATGGGAAATATGATGGTTATGGTGTAGAGACATGGGCAAGAGGAAGCCGGTACCGCGGGCAGTATAGGCAGGGTCTTAGATATGGTTTTGGAGTGTATAGGTTTTACACTGGTGATGTTTATGCTGGGGAATGGTCTAATGGGCAGACTCATGGGTGTGGAATTCATACCTGTGAGGATGGGAGTAGATATGTTGGGGAATTCAAGTGGGGCGTCAAGCATGGCCTTGGTCACTACCATTTCAGAAATGGGGATACATATGCTGGAGAATATTTTGCGGATAAAATGCATGGGTTTGGAGTCTATCGATTTGCAAATGGACATAGGTACGAGGGAGCCTGGCATGAGGGTAGAAGGCAAGGGCTTGGTATGTACACATTCAGAACTGGGGAAACTCAGGCTGGTCACTGGCAAAATGGAGTCCTTGATGTTCCAAGCACACAAAATGCAACTTATCCTGTATCTCCGGTTGCTGTTAATCATTCCAAAGTACTCAATGCGGTACAGGAAGCACGAATAGTGGCAGAGAAAGCCTATGATGTCGCCAAGGTGGATGAAAGAGTGAACAGGGCTGTAACAGCAGCTAATAGGGCAGCAAATGCAGCTAGAGTAGCAGCAGTGAAAGCTGTCCAGAAACAAATGCAGCACAATAGTAGCAGTGACAGCATACCAATTCCAATTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

483

Amino Acids

53.96

Weight (kDa)

9.67

Isoelectric Point (pI)

41.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002779)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35170 AT4G17080
fragaria_vesca	FvH4_5g20710 FvH4_5g20710 FvH4_7g09080 FvH4_7g09080
malus_domestica	MD02G1221500.v1.1 MD04G1054000.v1.1 MD06G1044700.v1.1 MD07G1094800.v1.1
prunus_persica	Prupe.2G119300_v2.0.a1 Prupe.5G052900_v2.0.a1
pyrus_communis	pycom02g18710 pycom04g04710 pycom06g03800 pycom07g07810
rosa_chinensis	RchiOBHm_Chr1g0344931 RchiOBHm_Chr7g0206481
rosa_laevigata	RLG00000003311 RLG00000028866
rosa_multiflora	Rmu_co8426337.1_g000001 Rmu_sc0000390.1_g000004 Rmu_sc0005065.1_g000042 Rmu_sc0010057.1_g000005
rosa_roxburghii	Rroxscaffold_3G00251490 Rroxscaffold_4G00309510
rosa_rugosa	Rorug01G0175100 Rorug07G0097700 Rorug07G0097800
rosa_samantha	Rh1AG193100 Rh1BG159400 Rh1CG178200 Rh1DG190200 Rh7AG229400 Rh7BG226000 Rh7CG244200 Rh7DG236400
rosa_wichuraiana	Rw1G015890 Rw7G019740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	813
AccB1I	GGYRCC	1 cut(s)	813
AccII	CGCG	2 cut(s)	351, 819
AcsI	RAATTY	4 cut(s)	269, 634, 924, 962
AcyI	GRCGYC	2 cut(s)	48, 975
AfaI	GTAC	5 cut(s)	815, 1091, 1136, 1254, 1266
AfiI	CCNNNNNNNGG	1 cut(s)	74
AflII	CTTAAG	1 cut(s)	551
AflIII	ACRYGT	1 cut(s)	672
AgsI	TTSAA	4 cut(s)	64, 114, 130, 967
AjiI	CACGTC	1 cut(s)	673
AjnI	CCWGG	2 cut(s)	530, 1100
AluBI	AGCT	5 cut(s)	23, 550, 1346, 1367, 1388
AluI	AGCT	5 cut(s)	23, 550, 1346, 1367, 1388
Alw26I	GTCTC	6 cut(s)	55, 415, 612, 663, 747, 785
AoxI	GGCC	1 cut(s)	985
ApeKI	GCWGC	6 cut(s)	80, 1343, 1355, 1364, 1376, 1405
ApoI	RAATTY	4 cut(s)	269, 634, 924, 962
Asp718I	GGTACC	1 cut(s)	813
AspLEI	GCGC	1 cut(s)	80
AsuHPI	GGTGA	3 cut(s)	407, 695, 887
BanI	GGYRCC	1 cut(s)	813
BbsI	GAAGAC	1 cut(s)	555
BbvI	GCAGC	6 cut(s)	92, 1355, 1367, 1376, 1388, 1417
BccI	CCATC	5 cut(s)	166, 517, 758, 770, 935
BceAI	ACGGC	1 cut(s)	533
BciT130I	CCWGG	2 cut(s)	532, 1102
BciVI	GTATCC	1 cut(s)	1009
BcoDI	GTCTC	6 cut(s)	55, 415, 612, 663, 747, 785
BfaI	CTAG	3 cut(s)	527, 573, 1368
BfrI	CTTAAG	1 cut(s)	551
BfuI	GTATCC	1 cut(s)	1009
BisI	GCNGC	9 cut(s)	81, 318, 349, 367, 1344, 1356, 1365, 1377, 1406
BlsI	GCNGC	9 cut(s)	82, 319, 350, 368, 1345, 1357, 1366, 1378, 1407
BmcAI	AGTACT	1 cut(s)	1254
Bme1390I	CCNGG	2 cut(s)	532, 1102
BmgBI	CACGTC	1 cut(s)	673
BmiI	GGNNCC	2 cut(s)	815, 1099
BmrFI	CCNGG	2 cut(s)	532, 1102
BmrI	ACTGGG	2 cut(s)	766, 1158
BmsI	GCATC	1 cut(s)	13
BmuI	ACTGGG	2 cut(s)	766, 1158
BpiI	GAAGAC	1 cut(s)	555
BpmI	CTGGAG	1 cut(s)	1047
Bsa29I	ATCGAT	1 cut(s)	1069
BsaBI	GATNNNNATC	1 cut(s)	63
BsaHI	GRCGYC	2 cut(s)	48, 975
BsaI	GGTCTC	2 cut(s)	415, 612
BsaJI	CCNNGG	3 cut(s)	817, 988, 1308
BsaWI	WCCGGW	1 cut(s)	1228
BsaXI	ACNNNNNCTCC	4 cut(s)	431, 461, 744, 774
Bsc4I	CCNNNNNNNGG	1 cut(s)	74
Bse118I	RCCGGY	2 cut(s)	586, 810
Bse1I	ACTGG	4 cut(s)	761, 877, 1153, 1175
Bse3DI	GCAATG	1 cut(s)	470
Bse8I	GATNNNNATC	1 cut(s)	63
BseBI	CCWGG	2 cut(s)	532, 1102
BseCI	ATCGAT	1 cut(s)	1069
BseDI	CCNNGG	3 cut(s)	817, 988, 1308
BseGI	GGATG	3 cut(s)	342, 946, 1321
BseJI	GATNNNNATC	1 cut(s)	63
BseLI	CCNNNNNNNGG	1 cut(s)	74
BseMI	GCAATG	1 cut(s)	470
BseMII	CTCAG	4 cut(s)	38, 87, 155, 1172
BseNI	ACTGG	4 cut(s)	761, 877, 1153, 1175
BseRI	GAGGAG	2 cut(s)	229, 362
BseXI	GCAGC	6 cut(s)	92, 1355, 1367, 1376, 1388, 1417
BseYI	CCCAGC	1 cut(s)	887
Bsh1236I	CGCG	2 cut(s)	351, 819
BshFI	GGCC	1 cut(s)	987
BshNI	GGYRCC	1 cut(s)	813
BshVI	ATCGAT	1 cut(s)	1069
BsiSI	CCGG	3 cut(s)	587, 811, 1229
BslFI	GGGAC	1 cut(s)	711
BslI	CCNNNNNNNGG	1 cut(s)	74
BsmAI	GTCTC	6 cut(s)	55, 415, 612, 663, 747, 785
BsmBI	CGTCTC	2 cut(s)	55, 663
BsmFI	GGGAC	1 cut(s)	711
BsnI	GGCC	1 cut(s)	987
Bso31I	GGTCTC	2 cut(s)	415, 612
Bsp1407I	TGTACA	1 cut(s)	1134
Bsp143I	GATC	1 cut(s)	27
BspANI	GGCC	1 cut(s)	987
BspCNI	CTCAG	4 cut(s)	37, 86, 154, 1171
BspDI	ATCGAT	1 cut(s)	1069
BspFNI	CGCG	2 cut(s)	351, 819
BspLI	GGNNCC	2 cut(s)	815, 1099
BspT107I	GGYRCC	1 cut(s)	813
BspTI	CTTAAG	1 cut(s)	551
BspTNI	GGTCTC	2 cut(s)	415, 612
BsrDI	GCAATG	1 cut(s)	470
BsrFI	RCCGGY	2 cut(s)	586, 810
BsrGI	TGTACA	1 cut(s)	1134
BsrI	ACTGG	4 cut(s)	761, 877, 1153, 1175
BssAI	RCCGGY	2 cut(s)	586, 810
BssECI	CCNNGG	3 cut(s)	817, 988, 1308
BssMI	GATC	1 cut(s)	27
BssNI	GRCGYC	2 cut(s)	48, 975
BssT1I	CCWWGG	2 cut(s)	988, 1308
Bst2UI	CCWGG	2 cut(s)	532, 1102
Bst4CI	ACNGT	1 cut(s)	702
Bst6I	CTCTTC	3 cut(s)	58, 112, 469
BstACI	GRCGYC	2 cut(s)	48, 975
BstAFI	CTTAAG	1 cut(s)	551
BstAPI	GCANNNNNTGC	1 cut(s)	1361
BstAUI	TGTACA	1 cut(s)	1134
BstC8I	GCNNGC	1 cut(s)	821
BstDEI	CTNAG	5 cut(s)	24, 73, 141, 839, 1158
BstDSI	CCRYGG	1 cut(s)	817
BstF5I	GGATG	3 cut(s)	342, 946, 1321
BstFNI	CGCG	2 cut(s)	351, 819
BstHHI	GCGC	1 cut(s)	80
BstKTI	GATC	1 cut(s)	30
BstMAI	GTCTC	6 cut(s)	55, 415, 612, 663, 747, 785
BstMBI	GATC	1 cut(s)	27
BstNI	CCWGG	2 cut(s)	532, 1102
BstSCI	CCNGG	2 cut(s)	530, 1100
BstUI	CGCG	2 cut(s)	351, 819
BstV1I	GCAGC	6 cut(s)	92, 1355, 1367, 1376, 1388, 1417
BstV2I	GAAGAC	1 cut(s)	555
Bsu15I	ATCGAT	1 cut(s)	1069
BsuI	GTATCC	1 cut(s)	1009
BsuRI	GGCC	1 cut(s)	987
BsuTUI	ATCGAT	1 cut(s)	1069
BtgI	CCRYGG	1 cut(s)	817
BtrI	CACGTC	1 cut(s)	673
BtsCI	GGATG	3 cut(s)	342, 946, 1321
BtsI	GCAGTG	2 cut(s)	1386, 1426
BtsIMutI	CAGTG	5 cut(s)	707, 870, 1168, 1386, 1426
Cac8I	GCNNGC	1 cut(s)	821
CfoI	GCGC	1 cut(s)	80
Cfr10I	RCCGGY	2 cut(s)	586, 810
Cfr42I	CCGCGG	1 cut(s)	820
ClaI	ATCGAT	1 cut(s)	1069
CseI	GACGC	3 cut(s)	37, 340, 964
Csp6I	GTAC	5 cut(s)	814, 1090, 1135, 1253, 1265
CviAII	CATG	6 cut(s)	733, 795, 914, 983, 1052, 1106
CviQI	GTAC	5 cut(s)	814, 1090, 1135, 1253, 1265
DdeI	CTNAG	5 cut(s)	24, 73, 141, 839, 1158
DpnI	GATC	1 cut(s)	29
DpnII	GATC	1 cut(s)	27
Eam1104I	CTCTTC	3 cut(s)	58, 112, 469
EarI	CTCTTC	3 cut(s)	58, 112, 469
EciI	GGCGGA	2 cut(s)	335, 353
Eco130I	CCWWGG	2 cut(s)	988, 1308
Eco31I	GGTCTC	2 cut(s)	415, 612
EcoRI	GAATTC	2 cut(s)	924, 962
EcoRII	CCWGG	2 cut(s)	530, 1100
EcoT14I	CCWWGG	2 cut(s)	988, 1308
EcoT22I	ATGCAT	2 cut(s)	6, 1053
ErhI	CCWWGG	2 cut(s)	988, 1308
Esp3I	CGTCTC	2 cut(s)	55, 663
FaeI	CATG	6 cut(s)	736, 798, 917, 986, 1055, 1109
FalI	AAGNNNNNCTT	2 cut(s)	412, 444
FaqI	GGGAC	1 cut(s)	711
FatI	CATG	6 cut(s)	732, 794, 913, 982, 1051, 1105
FauI	CCCGC	1 cut(s)	812
FauNDI	CATATG	1 cut(s)	1021
Fnu4HI	GCNGC	9 cut(s)	81, 318, 349, 367, 1344, 1356, 1365, 1377, 1406
FokI	GGATG	3 cut(s)	329, 953, 1328
Fsp4HI	GCNGC	9 cut(s)	81, 318, 349, 367, 1344, 1356, 1365, 1377, 1406
FspBI	CTAG	3 cut(s)	527, 573, 1368
GlaI	GCGC	1 cut(s)	79
GluI	GCNGC	9 cut(s)	81, 318, 349, 367, 1344, 1356, 1365, 1377, 1406
GsaI	CCCAGC	1 cut(s)	891
GsuI	CTGGAG	1 cut(s)	1047
HaeIII	GGCC	1 cut(s)	987
HapII	CCGG	3 cut(s)	587, 811, 1229
HgaI	GACGC	3 cut(s)	37, 340, 964
HhaI	GCGC	1 cut(s)	80
Hin1I	GRCGYC	2 cut(s)	48, 975
Hin1II	CATG	6 cut(s)	736, 798, 917, 986, 1055, 1109
Hin6I	GCGC	1 cut(s)	78
HinP1I	GCGC	1 cut(s)	78
HincII	GTYRAC	1 cut(s)	355
HindII	GTYRAC	1 cut(s)	355
HindIII	AAGCTT	1 cut(s)	548
HinfI	GANTC	3 cut(s)	910, 1062, 1182
HpaII	CCGG	3 cut(s)	587, 811, 1229
HphI	GGTGA	3 cut(s)	407, 695, 887
Hpy166II	GTNNAC	3 cut(s)	355, 1137, 1327
Hpy188I	TCNGA	6 cut(s)	19, 27, 32, 58, 1007, 1145
Hpy188III	TCNNGA	4 cut(s)	437, 573, 708, 1393
Hpy8I	GTNNAC	3 cut(s)	355, 1137, 1327
HpyAV	CCTTC	4 cut(s)	108, 318, 403, 1110
HpyCH4III	ACNGT	1 cut(s)	702
HpyCH4IV	ACGT	1 cut(s)	672
HpyCH4V	TGCA	7 cut(s)	4, 470, 1051, 1076, 1211, 1364, 1405
HpyF3I	CTNAG	5 cut(s)	24, 73, 141, 839, 1158
HpySE526I	ACGT	1 cut(s)	672
Hsp92I	GRCGYC	2 cut(s)	48, 975
Hsp92II	CATG	6 cut(s)	736, 798, 917, 986, 1055, 1109
HspAI	GCGC	1 cut(s)	78
KpnI	GGTACC	1 cut(s)	817
KspI	CCGCGG	1 cut(s)	820
Kzo9I	GATC	1 cut(s)	27
LmnI	GCTCC	1 cut(s)	1097
Lsp1109I	GCAGC	6 cut(s)	92, 1355, 1367, 1376, 1388, 1417
LweI	GCATC	1 cut(s)	13
MaeI	CTAG	3 cut(s)	527, 573, 1368
MaeII	ACGT	1 cut(s)	672
MaeIII	GTNAC	4 cut(s)	992, 1166, 1336, 1421
MalI	GATC	1 cut(s)	29
MboI	GATC	1 cut(s)	27
MboII	GAAGA	6 cut(s)	45, 99, 102, 298, 456, 555
MfeI	CAATTG	1 cut(s)	600
MluCI	AATT	9 cut(s)	114, 125, 269, 600, 634, 924, 962, 1434, 1440
MlyI	GAGTC	3 cut(s)	904, 1071, 1191
Mph1103I	ATGCAT	2 cut(s)	6, 1053
MseI	TTAA	2 cut(s)	552, 1239
MslI	CAYNNNNRTG	2 cut(s)	918, 933
MspA1I	CMGCKG	1 cut(s)	819
MspCI	CTTAAG	1 cut(s)	551
MspI	CCGG	3 cut(s)	587, 811, 1229
MspR9I	CCNGG	2 cut(s)	532, 1102
MunI	CAATTG	1 cut(s)	600
MvaI	CCWGG	2 cut(s)	532, 1102
MvnI	CGCG	2 cut(s)	351, 819
NdeI	CATATG	1 cut(s)	1021
NdeII	GATC	1 cut(s)	27
NlaIII	CATG	6 cut(s)	736, 798, 917, 986, 1055, 1109
NlaIV	GGNNCC	2 cut(s)	815, 1099
NmeAIII	GCCGAG	1 cut(s)	646
NmuCI	GTSAC	3 cut(s)	992, 1166, 1421
NsiI	ATGCAT	2 cut(s)	6, 1053
PflFI	GACNNNGTC	1 cut(s)	559
PkrI	GCNGC	9 cut(s)	82, 319, 350, 368, 1345, 1357, 1366, 1378, 1407
PleI	GAGTC	3 cut(s)	904, 1070, 1190
PpsI	GAGTC	3 cut(s)	904, 1070, 1190
Psp6I	CCWGG	2 cut(s)	530, 1100
PspFI	CCCAGC	1 cut(s)	887
PspGI	CCWGG	2 cut(s)	530, 1100
PspN4I	GGNNCC	2 cut(s)	815, 1099
PsyI	GACNNNGTC	1 cut(s)	559
RsaI	GTAC	5 cut(s)	815, 1091, 1136, 1254, 1266
RsaNI	GTAC	5 cut(s)	814, 1090, 1135, 1253, 1265
RseI	CAYNNNNRTG	2 cut(s)	918, 933
SacII	CCGCGG	1 cut(s)	820
SaqAI	TTAA	2 cut(s)	552, 1239
SatI	GCNGC	9 cut(s)	81, 318, 349, 367, 1344, 1356, 1365, 1377, 1406
Sau3AI	GATC	1 cut(s)	27
ScaI	AGTACT	1 cut(s)	1254
SchI	GAGTC	3 cut(s)	904, 1071, 1191
ScrFI	CCNGG	2 cut(s)	532, 1102
SfaNI	GCATC	1 cut(s)	13
Sfr303I	CCGCGG	1 cut(s)	820
SgrBI	CCGCGG	1 cut(s)	820
SmiMI	CAYNNNNRTG	2 cut(s)	918, 933
SmlI	CTYRAG	1 cut(s)	551
SmoI	CTYRAG	1 cut(s)	551
Sse9I	AATT	9 cut(s)	114, 125, 269, 600, 634, 924, 962, 1434, 1440
SspI	AATATT	1 cut(s)	1034
SspMI	CTAG	3 cut(s)	527, 573, 1368
StyD4I	CCNGG	2 cut(s)	530, 1100
StyI	CCWWGG	2 cut(s)	988, 1308
TaaI	ACNGT	1 cut(s)	702
TaiI	ACGT	1 cut(s)	675
TaqI	TCGA	1 cut(s)	1069
TasI	AATT	9 cut(s)	114, 125, 269, 600, 634, 924, 962, 1434, 1440
TatI	WGTACW	2 cut(s)	1134, 1252
TauI	GCSGC	3 cut(s)	320, 351, 369
Tru1I	TTAA	2 cut(s)	552, 1239
Tru9I	TTAA	2 cut(s)	552, 1239
TscAI	CASTG	5 cut(s)	707, 877, 1175, 1386, 1426
TseFI	GTSAC	3 cut(s)	992, 1166, 1421
TseI	GCWGC	6 cut(s)	80, 1343, 1355, 1364, 1376, 1405
Tsp45I	GTSAC	3 cut(s)	992, 1166, 1421
TspDTI	ATGAA	2 cut(s)	917, 1332
TspGWI	ACGGA	1 cut(s)	681
TspRI	CASTG	5 cut(s)	707, 877, 1175, 1386, 1426
Tth111I	GACNNNGTC	1 cut(s)	559
Vha464I	CTTAAG	1 cut(s)	551
XapI	RAATTY	4 cut(s)	269, 634, 924, 962
XbaI	TCTAGA	1 cut(s)	572
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1007
XspI	CTAG	3 cut(s)	527, 573, 1368
ZrmI	AGTACT	1 cut(s)	1254
Zsp2I	ATGCAT	2 cut(s)	6, 1053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.