Rorug07G0097800

Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0002779
Physical Location & Seq
Reverse (-)
7679467 .. 7682501
3035 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0097800.1

Sequence Viewer

Length: 1422 bp
ATGGCCAACACGATCGCCGGCGTCGCCGTCGGGATTTCATCCGCAACTCCCAGGCTTTCTCAGAGACCCATTTCACGGTCGTCTCGGCGTTTTTCCACGGTCAAAATGGCCGTCTCGCTCGACGAGAAGAAGAAGAATTTCACTCTTCAGAAATCCGAGGAGGCCTTCAATGCCGCCAAGGAGTTGATGCCTGGAGGTGTGAATTCCCCTGTACGTGCTTTTAAATCTGTTGGCGGACAACCTGTTGTGATTGATTCTGTCAAGGGCTCTCACATGTGGGACATTGATGGCAATGAGTACATTGACTACGTAGGTTCTTGGGGACCTGCAATAATCGGGCACGCAGATGATAAGGTACTTGCAGCTCTGGCTGAAACAATGAAGAAAGGAACAAGCTTTGGTGCACCTTGTCTTCTAGAAAATGTTCTGGCAAAAATGGTGATTGAAGCTGTTCCAAGCATTGAAATGGTTCGGTTTGTTAACTCAGGCACAGAAGCATGTATGGGTGTGCTTCGTCTGGCCCGTGCATATACTGGCCGAGGGAAGATAATTAAGTTTGAAGGCTGTTACCATGGCCATGCTGATCCATTCCTTGTCAAGGCTGGTAGTGGGGTTGCCACATTAGGACTTCCAGACTCACCAGGTGTTCCTAAAGCAGCGACTATTGATACGCTAACAGCCCCTTACAATGACTTGTCAGCCGTGGAAGCTCTTTTACAAAGTAACAAAGGAGAAGTTGCAGCAATCATCCTTGAACCAGTTGTTGGGAACTCTGGTTTTATCACTCCTACCCCAGATTTCCTTAACGGAATACGCAAACTCACCAAAGAACATGGTGCTCTCCTCATTTTTGATGAAGTGATGACTGGGTTCCGTTTGTCTTATGGTGGAGCTCAGGAGTATTTTGGTATTACTCCTGATTTAACAACACTTGGGAAGATCATTGGTGGCGGTCTACCAGTTGGTGCATATGGTGGAAGGAGGGAGATTATGGAAATGGTGGCACCAGCAGGGCCAATGTATCAGGCTGGGACCTTGAGTGGTAACCCGCTAGCAATGACTGCTGGGATTCACACCCTTGAGAGGTTGAAGGAGCCAGGCAGCTATGAACACCTGAACAAGATTACAGGTGACCTTATTCAAGGTATCATAGATGCTGGGAAGAAGGCTGGACATGCAATTTGTGGTGGATATATCAGCGGGATGTTTGGATTCTTCTTCACTGAAGGGCCTGTTTACAACTTTGACGATGCAAAAAAGAGTGATGCCGCAAGGTTTGGAAGGTTTTATAGGGGAATGCTGGAGGAAGGTGTATACTTTGCTCCCTCGCAGTTTGAGGCTGGGTTTACAAGCTTGGCGCATACTTCTGAGGACATCCAAAATACAATAGCTGCTGCAGAGAAAGTTTTAAGGCAGATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MORN

Protein Analysis

473

Amino Acids

50.26

Weight (kDa)

6.53

Isoelectric Point (pI)

33.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_3 PF00202 81 - 390 3.5e-71 Aminotransferase class-III
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 334
AccB1I GGYRCC 1 cut(s) 1003
AccB7I CCANNNNNTGG 1 cut(s) 764
AccI GTMKAC 2 cut(s) 955, 1314
AciI CCGC 7 cut(s) 42, 174, 234, 951, 1049, 1200, 1269
AclWI GGATC 1 cut(s) 578
AcoI YGGCCR 4 cut(s) 3, 108, 535, 574
AcsI RAATTY 2 cut(s) 136, 202
AcuI CTGAAG 2 cut(s) 131, 1245
AcyI GRCGYC 1 cut(s) 21
AdeI CACNNNGTG 1 cut(s) 644
AfaI GTAC 3 cut(s) 213, 299, 357
AfiI CCNNNNNNNGG 4 cut(s) 75, 598, 764, 1083
AflIII ACRYGT 1 cut(s) 273
AgsI TTSAA 7 cut(s) 169, 446, 464, 560, 755, 1090, 1142
AjnI CCWGG 4 cut(s) 50, 190, 640, 1096
AjuI GAANNNNNNNTTGG 2 cut(s) 747, 779
AluBI AGCT 8 cut(s) 365, 396, 449, 710, 893, 1104, 1353, 1391
AluI AGCT 8 cut(s) 365, 396, 449, 710, 893, 1104, 1353, 1391
Alw21I GWGCWC 3 cut(s) 406, 841, 895
Alw26I GTCTC 3 cut(s) 58, 87, 118
Alw44I GTGCAC 1 cut(s) 402
AlwI GGATC 1 cut(s) 578
AoxI GGCC 8 cut(s) 3, 108, 162, 519, 535, 574, 1013, 1229
ApaLI GTGCAC 1 cut(s) 402
ApeKI GCWGC 6 cut(s) 362, 656, 740, 1101, 1391, 1394
ApoI RAATTY 2 cut(s) 136, 202
ArsI GACNNNNNNTTYG 4 cut(s) 96, 128, 1164, 1196
Asp700I GAANNNNTTC 4 cut(s) 137, 423, 450, 468
AspLEI GCGC 1 cut(s) 1360
AspS9I GGNCC 5 cut(s) 323, 520, 1013, 1032, 1229
AsuHPI GGTGA 4 cut(s) 451, 630, 814, 1142
AsuNHI GCTAGC 1 cut(s) 1051
AvaII GGWCC 2 cut(s) 323, 1032
BaeGI GKGCMC 2 cut(s) 342, 406
BalI TGGCCA 2 cut(s) 5, 576
BanI GGYRCC 1 cut(s) 1003
BanII GRGCYC 2 cut(s) 269, 895
BarI GAAGNNNNNNTAC 2 cut(s) 699, 731
BbsI GAAGAC 1 cut(s) 404
Bbv12I GWGCWC 3 cut(s) 406, 841, 895
BbvI GCAGC 6 cut(s) 374, 668, 752, 1113, 1378, 1381
BccI CCATC 1 cut(s) 281
BceAI ACGGC 3 cut(s) 11, 95, 686
BciT130I CCWGG 4 cut(s) 52, 192, 642, 1098
BcoDI GTCTC 3 cut(s) 58, 87, 118
BfaI CTAG 2 cut(s) 416, 1052
BfmI CTRYAG 1 cut(s) 1395
BfuAI ACCTGC 1 cut(s) 334
BisI GCNGC 8 cut(s) 174, 363, 657, 741, 1102, 1269, 1392, 1395
BlsI GCNGC 8 cut(s) 175, 364, 658, 742, 1103, 1270, 1393, 1396
Bme1390I CCNGG 4 cut(s) 52, 192, 642, 1098
Bme18I GGWCC 2 cut(s) 323, 1032
BmgT120I GGNCC 5 cut(s) 323, 520, 1013, 1032, 1229
BmiI GGNNCC 5 cut(s) 324, 872, 1005, 1033, 1095
BmrFI CCNGG 4 cut(s) 52, 192, 642, 1098
BmrI ACTGGG 1 cut(s) 876
BmsI GCATC 4 cut(s) 177, 1144, 1240, 1255
BmtI GCTAGC 1 cut(s) 1055
BmuI ACTGGG 1 cut(s) 876
BpiI GAAGAC 1 cut(s) 404
BpmI CTGGAG 2 cut(s) 213, 1322
Bpu10I CCTNAGC 1 cut(s) 894
BpuEI CTTGAG 2 cut(s) 1057, 1100
BsaAI YACGTR 2 cut(s) 215, 310
BsaHI GRCGYC 1 cut(s) 21
BsaI GGTCTC 1 cut(s) 58
BsaJI CCNNGG 7 cut(s) 50, 96, 156, 177, 538, 571, 702
Bsc4I CCNNNNNNNGG 4 cut(s) 75, 598, 764, 1083
Bse118I RCCGGY 1 cut(s) 17
Bse1I ACTGG 4 cut(s) 538, 758, 871, 959
Bse3DI GCAATG 2 cut(s) 298, 1062
BseBI CCWGG 4 cut(s) 52, 192, 642, 1098
BseDI CCNNGG 7 cut(s) 50, 96, 156, 177, 538, 571, 702
BseGI GGATG 4 cut(s) 38, 747, 1209, 1374
BseLI CCNNNNNNNGG 4 cut(s) 75, 598, 764, 1083
BseMI GCAATG 2 cut(s) 298, 1062
BseMII CTCAG 4 cut(s) 74, 498, 908, 1359
BseNI ACTGG 4 cut(s) 538, 758, 871, 959
BseRI GAGGAG 2 cut(s) 173, 833
BseSI GKGCMC 2 cut(s) 342, 406
BseXI GCAGC 6 cut(s) 374, 668, 752, 1113, 1378, 1381
BseYI CCCAGC 4 cut(s) 1028, 1064, 1157, 1340
Bsh1285I CGRYCG 2 cut(s) 15, 80
BshFI GGCC 8 cut(s) 5, 110, 164, 521, 537, 576, 1015, 1231
BshNI GGYRCC 1 cut(s) 1003
BsiEI CGRYCG 2 cut(s) 15, 80
BsiHKAI GWGCWC 3 cut(s) 406, 841, 895
BsiSI CCGG 1 cut(s) 18
BslFI GGGAC 3 cut(s) 293, 336, 1045
BslI CCNNNNNNNGG 4 cut(s) 75, 598, 764, 1083
BsmAI GTCTC 3 cut(s) 58, 87, 118
BsmBI CGTCTC 2 cut(s) 87, 118
BsmFI GGGAC 3 cut(s) 293, 336, 1045
BsmI GAATGC 1 cut(s) 1302
BsnI GGCC 8 cut(s) 5, 110, 164, 521, 537, 576, 1015, 1231
Bso31I GGTCTC 1 cut(s) 58
Bsp1286I GDGCHC 5 cut(s) 269, 342, 406, 841, 895
Bsp143I GATC 3 cut(s) 12, 583, 939
Bsp19I CCATGG 1 cut(s) 571
BspACI CCGC 7 cut(s) 42, 174, 234, 951, 1049, 1200, 1269
BspANI GGCC 8 cut(s) 5, 110, 164, 521, 537, 576, 1015, 1231
BspCNI CTCAG 4 cut(s) 73, 497, 907, 1360
BspLI GGNNCC 5 cut(s) 324, 872, 1005, 1033, 1095
BspMAI CTGCAG 1 cut(s) 1399
BspMI ACCTGC 1 cut(s) 334
BspOI GCTAGC 1 cut(s) 1055
BspPI GGATC 1 cut(s) 578
BspT107I GGYRCC 1 cut(s) 1003
BspTNI GGTCTC 1 cut(s) 58
BsrDI GCAATG 2 cut(s) 298, 1062
BsrFI RCCGGY 1 cut(s) 17
BsrI ACTGG 4 cut(s) 538, 758, 871, 959
BssAI RCCGGY 1 cut(s) 17
BssECI CCNNGG 7 cut(s) 50, 96, 156, 177, 538, 571, 702
BssMI GATC 3 cut(s) 12, 583, 939
BssNAI GTATAC 1 cut(s) 1315
BssNI GRCGYC 1 cut(s) 21
BssT1I CCWWGG 2 cut(s) 177, 571
Bst1107I GTATAC 1 cut(s) 1315
Bst2UI CCWGG 4 cut(s) 52, 192, 642, 1098
Bst4CI ACNGT 2 cut(s) 78, 100
Bst6I CTCTTC 1 cut(s) 150
BstACI GRCGYC 1 cut(s) 21
BstAPI GCANNNNNTGC 1 cut(s) 1061
BstBAI YACGTR 2 cut(s) 215, 310
BstC8I GCNNGC 3 cut(s) 19, 342, 1053
BstDEI CTNAG 4 cut(s) 60, 484, 894, 1368
BstDSI CCRYGG 3 cut(s) 96, 571, 702
BstEII GGTNACC 2 cut(s) 1043, 1130
BstENI CCTNNNNNAGG 1 cut(s) 596
BstF5I GGATG 4 cut(s) 38, 747, 1209, 1374
BstHHI GCGC 1 cut(s) 1360
BstKTI GATC 3 cut(s) 15, 586, 942
BstMAI GTCTC 3 cut(s) 58, 87, 118
BstMBI GATC 3 cut(s) 12, 583, 939
BstMCI CGRYCG 2 cut(s) 15, 80
BstMWI GCNNNNNNNGC 6 cut(s) 23, 170, 368, 707, 1061, 1175
BstNI CCWGG 4 cut(s) 52, 192, 642, 1098
BstNSI RCATGY 3 cut(s) 277, 501, 1178
BstPI GGTNACC 2 cut(s) 1043, 1130
BstSCI CCNGG 4 cut(s) 50, 190, 640, 1096
BstSFI CTRYAG 1 cut(s) 1395
BstSLI GKGCMC 2 cut(s) 342, 406
BstSNI TACGTA 1 cut(s) 310
BstV1I GCAGC 6 cut(s) 374, 668, 752, 1113, 1378, 1381
BstV2I GAAGAC 1 cut(s) 404
BstZ17I GTATAC 1 cut(s) 1315
BsuRI GGCC 8 cut(s) 5, 110, 164, 521, 537, 576, 1015, 1231
BtgI CCRYGG 3 cut(s) 96, 571, 702
BtsCI GGATG 4 cut(s) 38, 747, 1209, 1374
BtsIMutI CAGTG 1 cut(s) 1221
BveI ACCTGC 1 cut(s) 334
Cac8I GCNNGC 3 cut(s) 19, 342, 1053
CfoI GCGC 1 cut(s) 1360
Cfr10I RCCGGY 1 cut(s) 17
Cfr13I GGNCC 5 cut(s) 323, 520, 1013, 1032, 1229
CseI GACGC 1 cut(s) 10
CsiI ACCWGGT 1 cut(s) 640
Csp6I GTAC 3 cut(s) 212, 298, 356
CviAII CATG 6 cut(s) 274, 498, 572, 578, 833, 1175
CviQI GTAC 3 cut(s) 212, 298, 356
DdeI CTNAG 4 cut(s) 60, 484, 894, 1368
DpnI GATC 3 cut(s) 14, 585, 941
DpnII GATC 3 cut(s) 12, 583, 939
DraI TTTAAA 1 cut(s) 223
DraIII CACNNNGTG 1 cut(s) 644
EaeI YGGCCR 4 cut(s) 3, 108, 535, 574
Eam1104I CTCTTC 1 cut(s) 150
EarI CTCTTC 1 cut(s) 150
EciI GGCGGA 1 cut(s) 249
Ecl136II GAGCTC 1 cut(s) 893
Eco105I TACGTA 1 cut(s) 310
Eco130I CCWWGG 2 cut(s) 177, 571
Eco147I AGGCCT 1 cut(s) 164
Eco24I GRGCYC 2 cut(s) 269, 895
Eco31I GGTCTC 1 cut(s) 58
Eco47I GGWCC 2 cut(s) 323, 1032
Eco53kI GAGCTC 1 cut(s) 893
Eco57I CTGAAG 2 cut(s) 131, 1245
Eco91I GGTNACC 2 cut(s) 1043, 1130
EcoICRI GAGCTC 1 cut(s) 893
EcoNI CCTNNNNNAGG 1 cut(s) 596
EcoO109I RGGNCCY 3 cut(s) 323, 1032, 1229
EcoO65I GGTNACC 2 cut(s) 1043, 1130
EcoRI GAATTC 1 cut(s) 202
EcoRII CCWGG 4 cut(s) 50, 190, 640, 1096
EcoT14I CCWWGG 2 cut(s) 177, 571
EcoT38I GRGCYC 2 cut(s) 269, 895
ErhI CCWWGG 2 cut(s) 177, 571
Esp3I CGTCTC 2 cut(s) 87, 118
FaeI CATG 6 cut(s) 277, 501, 575, 581, 836, 1178
FaqI GGGAC 3 cut(s) 293, 336, 1045
FatI CATG 6 cut(s) 273, 497, 571, 577, 832, 1174
FauI CCCGC 2 cut(s) 1056, 1193
FauNDI CATATG 1 cut(s) 970
FblI GTMKAC 2 cut(s) 955, 1314
Fnu4HI GCNGC 8 cut(s) 174, 363, 657, 741, 1102, 1269, 1392, 1395
FokI GGATG 4 cut(s) 25, 734, 1216, 1361
FriOI GRGCYC 2 cut(s) 269, 895
Fsp4HI GCNGC 8 cut(s) 174, 363, 657, 741, 1102, 1269, 1392, 1395
FspBI CTAG 2 cut(s) 416, 1052
GlaI GCGC 1 cut(s) 1359
GluI GCNGC 8 cut(s) 174, 363, 657, 741, 1102, 1269, 1392, 1395
GsaI CCCAGC 4 cut(s) 1032, 1068, 1161, 1344
GsuI CTGGAG 2 cut(s) 213, 1322
HaeIII GGCC 8 cut(s) 5, 110, 164, 521, 537, 576, 1015, 1231
HapII CCGG 1 cut(s) 18
HgaI GACGC 1 cut(s) 10
HhaI GCGC 1 cut(s) 1360
Hin1I GRCGYC 1 cut(s) 21
Hin1II CATG 6 cut(s) 277, 501, 575, 581, 836, 1178
Hin6I GCGC 1 cut(s) 1358
HinP1I GCGC 1 cut(s) 1358
HincII GTYRAC 1 cut(s) 481
HindII GTYRAC 1 cut(s) 481
HindIII AAGCTT 2 cut(s) 394, 1351
HinfI GANTC 4 cut(s) 254, 635, 1069, 1212
HpaI GTTAAC 1 cut(s) 481
HpaII CCGG 1 cut(s) 18
HphI GGTGA 4 cut(s) 451, 630, 814, 1142
Hpy166II GTNNAC 6 cut(s) 404, 481, 956, 1237, 1315, 1347
Hpy188I TCNGA 4 cut(s) 63, 150, 157, 1369
Hpy188III TCNNGA 5 cut(s) 31, 416, 632, 896, 917
Hpy8I GTNNAC 6 cut(s) 404, 481, 956, 1237, 1315, 1347
Hpy99I CGWCG 3 cut(s) 26, 32, 125
HpyAV CCTTC 8 cut(s) 175, 554, 972, 1084, 1159, 1220, 1275, 1301
HpyCH4III ACNGT 2 cut(s) 78, 100
HpyCH4IV ACGT 2 cut(s) 214, 309
HpyCH4V TGCA 9 cut(s) 329, 362, 404, 527, 740, 968, 1178, 1253, 1397
HpyF10VI GCNNNNNNNGC 6 cut(s) 23, 170, 368, 707, 1061, 1175
HpyF3I CTNAG 4 cut(s) 60, 484, 894, 1368
HpySE526I ACGT 2 cut(s) 214, 309
Hsp92I GRCGYC 1 cut(s) 21
Hsp92II CATG 6 cut(s) 277, 501, 575, 581, 836, 1178
HspAI GCGC 1 cut(s) 1358
KroI GCCGGC 1 cut(s) 17
KroNI GCCGGC 1 cut(s) 19
KspAI GTTAAC 1 cut(s) 481
Kzo9I GATC 3 cut(s) 12, 583, 939
LmnI GCTCC 3 cut(s) 890, 1093, 1327
Lsp1109I GCAGC 6 cut(s) 374, 668, 752, 1113, 1378, 1381
LweI GCATC 4 cut(s) 177, 1144, 1240, 1255
MabI ACCWGGT 1 cut(s) 640
MaeI CTAG 2 cut(s) 416, 1052
MaeII ACGT 2 cut(s) 214, 309
MaeIII GTNAC 4 cut(s) 566, 722, 1043, 1130
MalI GATC 3 cut(s) 14, 585, 941
MboI GATC 3 cut(s) 12, 583, 939
MhlI GDGCHC 5 cut(s) 269, 342, 406, 841, 895
MlsI TGGCCA 2 cut(s) 5, 576
MluCI AATT 4 cut(s) 136, 202, 549, 1179
MluNI TGGCCA 2 cut(s) 5, 576
MlyI GAGTC 1 cut(s) 629
Mox20I TGGCCA 2 cut(s) 5, 576
MreI CGCCGGCG 1 cut(s) 17
MroNI GCCGGC 1 cut(s) 17
MroXI GAANNNNTTC 4 cut(s) 137, 423, 450, 468
MscI TGGCCA 2 cut(s) 5, 576
MseI TTAA 6 cut(s) 222, 480, 552, 804, 923, 1409
MslI CAYNNNNRTG 3 cut(s) 345, 464, 576
Msp20I TGGCCA 2 cut(s) 5, 576
MspA1I CMGCKG 1 cut(s) 1200
MspI CCGG 1 cut(s) 18
MspR9I CCNGG 4 cut(s) 52, 192, 642, 1098
Mva1269I GAATGC 1 cut(s) 1302
MvaI CCWGG 4 cut(s) 52, 192, 642, 1098
MwoI GCNNNNNNNGC 6 cut(s) 23, 170, 368, 707, 1061, 1175
NaeI GCCGGC 1 cut(s) 19
NcoI CCATGG 1 cut(s) 571
NdeI CATATG 1 cut(s) 970
NdeII GATC 3 cut(s) 12, 583, 939
NgoMIV GCCGGC 1 cut(s) 17
NheI GCTAGC 1 cut(s) 1051
NlaIII CATG 6 cut(s) 277, 501, 575, 581, 836, 1178
NlaIV GGNNCC 5 cut(s) 324, 872, 1005, 1033, 1095
NmeAIII GCCGAG 2 cut(s) 64, 563
NmuCI GTSAC 1 cut(s) 1130
NspI RCATGY 3 cut(s) 277, 501, 1178
PceI AGGCCT 1 cut(s) 164
PciI ACATGT 1 cut(s) 273
PcsI WCGNNNNNNNCGW 1 cut(s) 520
PctI GAATGC 1 cut(s) 1302
PdiI GCCGGC 1 cut(s) 19
PdmI GAANNNNTTC 4 cut(s) 137, 423, 450, 468
PfeI GAWTC 3 cut(s) 254, 1069, 1212
PflMI CCANNNNNTGG 1 cut(s) 764
PkrI GCNGC 8 cut(s) 175, 364, 658, 742, 1103, 1270, 1393, 1396
Ple19I CGATCG 1 cut(s) 15
PleI GAGTC 1 cut(s) 629
PpsI GAGTC 1 cut(s) 629
Ppu21I YACGTR 2 cut(s) 215, 310
PpuMI RGGWCCY 2 cut(s) 323, 1032
PscI ACATGT 1 cut(s) 273
Psp124BI GAGCTC 1 cut(s) 895
Psp5II RGGWCCY 2 cut(s) 323, 1032
Psp6I CCWGG 4 cut(s) 50, 190, 640, 1096
PspEI GGTNACC 2 cut(s) 1043, 1130
PspFI CCCAGC 4 cut(s) 1028, 1064, 1157, 1340
PspGI CCWGG 4 cut(s) 50, 190, 640, 1096
PspN4I GGNNCC 5 cut(s) 324, 872, 1005, 1033, 1095
PspPI GGNCC 5 cut(s) 323, 520, 1013, 1032, 1229
PspPPI RGGWCCY 2 cut(s) 323, 1032
PstI CTGCAG 1 cut(s) 1399
PvuI CGATCG 1 cut(s) 15
RsaI GTAC 3 cut(s) 213, 299, 357
RsaNI GTAC 3 cut(s) 212, 298, 356
RseI CAYNNNNRTG 3 cut(s) 345, 464, 576
SacI GAGCTC 1 cut(s) 895
SaqAI TTAA 6 cut(s) 222, 480, 552, 804, 923, 1409
SatI GCNGC 8 cut(s) 174, 363, 657, 741, 1102, 1269, 1392, 1395
Sau3AI GATC 3 cut(s) 12, 583, 939
Sau96I GGNCC 5 cut(s) 323, 520, 1013, 1032, 1229
SchI GAGTC 1 cut(s) 629
ScrFI CCNGG 4 cut(s) 52, 192, 642, 1098
SduI GDGCHC 5 cut(s) 269, 342, 406, 841, 895
SexAI ACCWGGT 1 cut(s) 640
SfaNI GCATC 4 cut(s) 177, 1144, 1240, 1255
SfcI CTRYAG 1 cut(s) 1395
SgrAI CRCCGGYG 1 cut(s) 17
SinI GGWCC 2 cut(s) 323, 1032
SmiMI CAYNNNNRTG 3 cut(s) 345, 464, 576
SmlI CTYRAG 2 cut(s) 1036, 1079
SmoI CTYRAG 2 cut(s) 1036, 1079
SnaBI TACGTA 1 cut(s) 310
Sse9I AATT 4 cut(s) 136, 202, 549, 1179
SseBI AGGCCT 1 cut(s) 164
SsiI CCGC 7 cut(s) 42, 174, 234, 951, 1049, 1200, 1269
SspMI CTAG 2 cut(s) 416, 1052
SstI GAGCTC 1 cut(s) 895
StuI AGGCCT 1 cut(s) 164
StyD4I CCNGG 4 cut(s) 50, 190, 640, 1096
StyI CCWWGG 2 cut(s) 177, 571
TaaI ACNGT 2 cut(s) 78, 100
TaiI ACGT 2 cut(s) 217, 312
TaqI TCGA 1 cut(s) 120
TasI AATT 4 cut(s) 136, 202, 549, 1179
TatI WGTACW 1 cut(s) 297
TauI GCSGC 2 cut(s) 176, 1271
TfiI GAWTC 3 cut(s) 254, 1069, 1212
Tru1I TTAA 6 cut(s) 222, 480, 552, 804, 923, 1409
Tru9I TTAA 6 cut(s) 222, 480, 552, 804, 923, 1409
TscAI CASTG 1 cut(s) 1228
TseFI GTSAC 1 cut(s) 1130
TseI GCWGC 6 cut(s) 362, 656, 740, 1101, 1391, 1394
Tsp45I GTSAC 1 cut(s) 1130
TspDTI ATGAA 4 cut(s) 27, 395, 870, 1122
TspGWI ACGGA 2 cut(s) 822, 863
TspRI CASTG 1 cut(s) 1228
Van91I CCANNNNNTGG 1 cut(s) 764
VneI GTGCAC 1 cut(s) 402
VpaK11BI GGWCC 2 cut(s) 323, 1032
XagI CCTNNNNNAGG 1 cut(s) 596
XapI RAATTY 2 cut(s) 136, 202
XbaI TCTAGA 1 cut(s) 415
XceI RCATGY 3 cut(s) 277, 501, 1178
XcmI CCANNNNNNNNNTGG 1 cut(s) 103
XmiI GTMKAC 2 cut(s) 955, 1314
XmnI GAANNNNTTC 4 cut(s) 137, 423, 450, 468
XspI CTAG 2 cut(s) 416, 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.