pycom02g18710

Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
16842296 .. 16845067
2772 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g18710.3

Sequence Viewer

Length: 1455 bp
ATGCATCACGAGAAATCTGAAGCTCAGATCGGAAAAGAAAGCATTGGCGTCTCTTCCGATTACAACCCAATCTCAGCCTCAGCCTCAGCCTCAGCCTCAGCCGCCGCCGCACCACCGCCATCGGCGCCTTCTTCTTCCTTCTCTTCCATTTCCGACCAACTCAATCTCATCACCCAATTCCCTCGCTGCCCATCTAAACATTTGCCCCACCATGACCCCCCAATCCCTCAAACCACACCTTACAAGCGACCCCTTTTGACCCAAACCCCCTCCTCCCTCTCCAAATCCCCGACCCTCTACAAATTCCCACCTCCTCCGCAAAACCCACCTCTCTTTTCCCCTTCTCTCGCTGCCAAATCCGCCTTCTTTCGCCTCCTCCGCCGCCGCCTCCTACTGCTCTCTTTGCCCTTCTTTTACTTCCTGGTCTCTCACCCTAGCCACTCTTTCTTCCTTGACTTCCTCTCCGCCTTTGCTTTCTCCGCCGCATTGCTCTTCTCCCTCAATCTCGCCCTGCCCCGCCTCCCCTCCATACGGCTGTTCCTGGCCAGGTCTTTCCCAAGCAAGCTCAAGACCTCCTCTAGCCCGCCGTTGCCCGTGTTTTGGTCAATCGGGTCGCGGCCGAAAGCCGAAAAGAAAGGGAGTTCCGGGTGTTGGGTTCAGGTTTACAGCAACGGTGACGTGTATGAGGGTGAATTTCATAAAGGAAAGTGTTCAGGAAGTGGGGTGTATTACTATTACATGAGCGGGAGGTTTGAGGGGGATTGGGTTGATGGGAAATATGATGGCTATGGTGTCGAGACGTGGGCAAGAGGAAGCCGGTACCGCGGGCAGTATAGGCAGGGCCTGAGGCATGGTTTCGGGGTGTATAGGTTCTACACTGGAGATGTTTATGCAGGGGAATGGTCTAATGGGCAGAGTCACGGGTGTGGAATCCATACCTGTGAGGATGGGAGTAGATATGTTGGGGAGTTCAAGTGGGGTGTCAAGCATGGCCTTGGTCACTACCATTTCAGAAATGGAGACACGTATGCTGGAGAATATTTTGCGGACAAAATGCATGGGTTTGGGGTCTATCGATTTGCAAATGGGCATAGGTATGAGGGAGCTTGGCATGAGGGTAGAAGGCAAGGGCTTGGTATGTACACATTTAGAAATGGGGAAACTCAAGCTGGTCACTGGCAAAATGGAATCCTTGATGTTCCAAGCACGCAGAATGCAACTTCTCCTGTATCTCCCATAGCTGTTAATCATTCCAAAGTACTTTATGCGGTTCAGGAAGCGAGAATAGTGTCCGAGAAAGCCTATGATGTAGCAAAGGTGGATGAAAGAGTGAACAGGGCCGTAACAGCAGCTAATAGGGCAGCAAATGCAGCTAGAGTATCAGCGGTGAAAGCTGTCCAGAAACAAGTGCAGCATAATACTAGCAGTGACCACATGCCAATTCAAATTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

485

Amino Acids

53.59

Weight (kDa)

9.56

Isoelectric Point (pI)

43.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 819
AccB1I GGYRCC 2 cut(s) 124, 819
AccBSI CCGCTC 1 cut(s) 744
AccII CGCG 2 cut(s) 616, 825
AcoI YGGCCR 2 cut(s) 543, 617
AcsI RAATTY 2 cut(s) 302, 692
AcuI CTGAAG 1 cut(s) 39
AcyI GRCGYC 2 cut(s) 48, 125
AfaI GTAC 3 cut(s) 821, 1142, 1260
AfiI CCNNNNNNNGG 3 cut(s) 531, 600, 651
AflIII ACRYGT 2 cut(s) 678, 1023
AgsI TTSAA 2 cut(s) 973, 1445
AjiI CACGTC 2 cut(s) 679, 801
AjnI CCWGG 3 cut(s) 420, 540, 545
AjuI GAANNNNNNNTTGG 2 cut(s) 347, 379
AleI CACNNNNGTG 1 cut(s) 924
AluBI AGCT 8 cut(s) 23, 565, 1106, 1169, 1241, 1352, 1373, 1394
AluI AGCT 8 cut(s) 23, 565, 1106, 1169, 1241, 1352, 1373, 1394
Alw26I GTCTC 4 cut(s) 55, 430, 791, 1014
AlwNI CAGNNNCTG 1 cut(s) 844
AoxI GGCC 5 cut(s) 543, 617, 841, 991, 1338
ApeKI GCWGC 6 cut(s) 186, 350, 1349, 1361, 1370, 1411
ApoI RAATTY 2 cut(s) 302, 692
Asp700I GAANNNNTTC 1 cut(s) 709
Asp718I GGTACC 1 cut(s) 819
AspLEI GCGC 1 cut(s) 127
AspS9I GGNCC 2 cut(s) 841, 1338
AsuC2I CCSGG 1 cut(s) 646
AsuHPI GGTGA 5 cut(s) 163, 422, 686, 701, 1399
AxyI CCTNAGG 1 cut(s) 845
BalI TGGCCA 1 cut(s) 545
BanI GGYRCC 2 cut(s) 124, 819
BauI CACGAG 1 cut(s) 8
BbvCI CCTCAGC 4 cut(s) 79, 85, 91, 97
BbvI GCAGC 6 cut(s) 173, 337, 1361, 1373, 1382, 1423
BccI CCATC 5 cut(s) 127, 199, 764, 776, 941
BceAI ACGGC 3 cut(s) 548, 571, 1325
BciT130I CCWGG 3 cut(s) 422, 542, 547
BcnI CCSGG 1 cut(s) 646
BcoDI GTCTC 4 cut(s) 55, 430, 791, 1014
BfaI CTAG 4 cut(s) 435, 579, 1374, 1422
BfoI RGCGCY 1 cut(s) 128
BmcAI AGTACT 1 cut(s) 1260
Bme1390I CCNGG 4 cut(s) 422, 542, 547, 646
BmgBI CACGTC 2 cut(s) 679, 801
BmgT120I GGNCC 2 cut(s) 841, 1338
BmiI GGNNCC 2 cut(s) 126, 821
BmrFI CCNGG 4 cut(s) 422, 542, 547, 646
BmsI GCATC 1 cut(s) 13
BpmI CTGGAG 2 cut(s) 900, 1053
Bpu10I CCTNAGC 4 cut(s) 79, 85, 91, 97
BpuEI CTTGAG 2 cut(s) 551, 1149
BpuMI CCSGG 1 cut(s) 646
Bsa29I ATCGAT 1 cut(s) 1075
BsaAI YACGTR 1 cut(s) 1026
BsaHI GRCGYC 2 cut(s) 48, 125
BsaI GGTCTC 1 cut(s) 430
BsaJI CCNNGG 2 cut(s) 823, 994
BsaXI ACNNNNNCTCC 4 cut(s) 446, 476, 959, 989
Bsc4I CCNNNNNNNGG 3 cut(s) 531, 600, 651
Bse118I RCCGGY 1 cut(s) 816
Bse1I ACTGG 2 cut(s) 883, 1181
Bse21I CCTNAGG 1 cut(s) 845
Bse3DI GCAATG 1 cut(s) 485
BseBI CCWGG 3 cut(s) 422, 542, 547
BseCI ATCGAT 1 cut(s) 1075
BseDI CCNNGG 2 cut(s) 823, 994
BseGI GGATG 2 cut(s) 952, 1327
BseLI CCNNNNNNNGG 3 cut(s) 531, 600, 651
BseMI GCAATG 1 cut(s) 485
BseMII CTCAG 7 cut(s) 38, 87, 93, 99, 105, 111, 836
BseNI ACTGG 2 cut(s) 883, 1181
BseRI GAGGAG 4 cut(s) 262, 303, 365, 565
BseX3I CGGCCG 1 cut(s) 617
BseXI GCAGC 6 cut(s) 173, 337, 1361, 1373, 1382, 1423
BsgI GTGCAG 1 cut(s) 1430
Bsh1236I CGCG 2 cut(s) 616, 825
Bsh1285I CGRYCG 1 cut(s) 620
BshFI GGCC 5 cut(s) 545, 619, 843, 993, 1340
BshNI GGYRCC 2 cut(s) 124, 819
BshVI ATCGAT 1 cut(s) 1075
BsiEI CGRYCG 1 cut(s) 620
BsiSI CCGG 2 cut(s) 645, 817
BslI CCNNNNNNNGG 3 cut(s) 531, 600, 651
BsmAI GTCTC 4 cut(s) 55, 430, 791, 1014
BsmBI CGTCTC 2 cut(s) 55, 791
BsmI GAATGC 1 cut(s) 1219
BsnI GGCC 5 cut(s) 545, 619, 843, 993, 1340
Bso31I GGTCTC 1 cut(s) 430
Bsp1407I TGTACA 1 cut(s) 1140
Bsp143I GATC 1 cut(s) 27
BspANI GGCC 5 cut(s) 545, 619, 843, 993, 1340
BspCNI CTCAG 7 cut(s) 37, 86, 92, 98, 104, 110, 837
BspDI ATCGAT 1 cut(s) 1075
BspFNI CGCG 2 cut(s) 616, 825
BspLI GGNNCC 2 cut(s) 126, 821
BspQI GCTCTTC 1 cut(s) 497
BspT107I GGYRCC 2 cut(s) 124, 819
BspTNI GGTCTC 1 cut(s) 430
BsrBI CCGCTC 1 cut(s) 744
BsrDI GCAATG 1 cut(s) 485
BsrFI RCCGGY 1 cut(s) 816
BsrGI TGTACA 1 cut(s) 1140
BsrI ACTGG 2 cut(s) 883, 1181
BssAI RCCGGY 1 cut(s) 816
BssECI CCNNGG 2 cut(s) 823, 994
BssMI GATC 1 cut(s) 27
BssNI GRCGYC 2 cut(s) 48, 125
BssSI CACGAG 1 cut(s) 8
BssT1I CCWWGG 1 cut(s) 994
Bst2BI CACGAG 1 cut(s) 8
Bst2UI CCWGG 3 cut(s) 422, 542, 547
Bst4CI ACNGT 1 cut(s) 674
Bst6I CTCTTC 3 cut(s) 58, 148, 497
BstACI GRCGYC 2 cut(s) 48, 125
BstAPI GCANNNNNTGC 1 cut(s) 1367
BstAUI TGTACA 1 cut(s) 1140
BstBAI YACGTR 1 cut(s) 1026
BstC8I GCNNGC 4 cut(s) 563, 584, 827, 1208
BstDEI CTNAG 7 cut(s) 24, 73, 79, 85, 91, 97, 845
BstDSI CCRYGG 1 cut(s) 823
BstF5I GGATG 2 cut(s) 952, 1327
BstFNI CGCG 2 cut(s) 616, 825
BstH2I RGCGCY 1 cut(s) 128
BstHHI GCGC 1 cut(s) 127
BstKTI GATC 1 cut(s) 30
BstMAI GTCTC 4 cut(s) 55, 430, 791, 1014
BstMBI GATC 1 cut(s) 27
BstMCI CGRYCG 1 cut(s) 620
BstNI CCWGG 3 cut(s) 422, 542, 547
BstNSI RCATGY 1 cut(s) 1438
BstSCI CCNGG 4 cut(s) 420, 540, 545, 644
BstUI CGCG 2 cut(s) 616, 825
BstV1I GCAGC 6 cut(s) 173, 337, 1361, 1373, 1382, 1423
BstZI CGGCCG 1 cut(s) 617
Bsu15I ATCGAT 1 cut(s) 1075
Bsu36I CCTNAGG 1 cut(s) 845
BsuRI GGCC 5 cut(s) 545, 619, 843, 993, 1340
BsuTUI ATCGAT 1 cut(s) 1075
BtgI CCRYGG 1 cut(s) 823
BtrI CACGTC 2 cut(s) 679, 801
BtsCI GGATG 2 cut(s) 952, 1327
BtsI GCAGTG 1 cut(s) 1432
BtsIMutI CAGTG 3 cut(s) 876, 1174, 1432
Cac8I GCNNGC 4 cut(s) 563, 584, 827, 1208
CaiI CAGNNNCTG 1 cut(s) 844
CfoI GCGC 1 cut(s) 127
Cfr10I RCCGGY 1 cut(s) 816
Cfr13I GGNCC 2 cut(s) 841, 1338
Cfr42I CCGCGG 1 cut(s) 826
ClaI ATCGAT 1 cut(s) 1075
CseI GACGC 1 cut(s) 37
Csp6I GTAC 3 cut(s) 820, 1141, 1259
CviAII CATG 7 cut(s) 212, 739, 851, 989, 1058, 1112, 1435
CviQI GTAC 3 cut(s) 820, 1141, 1259
DdeI CTNAG 7 cut(s) 24, 73, 79, 85, 91, 97, 845
DinI GGCGCC 1 cut(s) 126
DpnI GATC 1 cut(s) 29
DpnII GATC 1 cut(s) 27
EaeI YGGCCR 2 cut(s) 543, 617
EagI CGGCCG 1 cut(s) 617
Eam1104I CTCTTC 3 cut(s) 58, 148, 497
EarI CTCTTC 3 cut(s) 58, 148, 497
EciI GGCGGA 4 cut(s) 349, 368, 454, 469
EclXI CGGCCG 1 cut(s) 617
Eco130I CCWWGG 1 cut(s) 994
Eco31I GGTCTC 1 cut(s) 430
Eco52I CGGCCG 1 cut(s) 617
Eco57I CTGAAG 1 cut(s) 39
Eco81I CCTNAGG 1 cut(s) 845
EcoO109I RGGNCCY 1 cut(s) 841
EcoRII CCWGG 3 cut(s) 420, 540, 545
EcoT14I CCWWGG 1 cut(s) 994
EcoT22I ATGCAT 2 cut(s) 6, 1059
EgeI GGCGCC 1 cut(s) 126
EheI GGCGCC 1 cut(s) 126
ErhI CCWWGG 1 cut(s) 994
Esp3I CGTCTC 2 cut(s) 55, 791
FaeI CATG 7 cut(s) 215, 742, 854, 992, 1061, 1115, 1438
FatI CATG 7 cut(s) 211, 738, 850, 988, 1057, 1111, 1434
FauI CCCGC 4 cut(s) 524, 591, 737, 818
FokI GGATG 2 cut(s) 959, 1334
FspBI CTAG 4 cut(s) 435, 579, 1374, 1422
GlaI GCGC 1 cut(s) 126
GsuI CTGGAG 2 cut(s) 900, 1053
HaeII RGCGCY 1 cut(s) 128
HaeIII GGCC 5 cut(s) 545, 619, 843, 993, 1340
HapII CCGG 2 cut(s) 645, 817
HgaI GACGC 1 cut(s) 37
HhaI GCGC 1 cut(s) 127
Hin1I GRCGYC 2 cut(s) 48, 125
Hin1II CATG 7 cut(s) 215, 742, 854, 992, 1061, 1115, 1438
Hin6I GCGC 1 cut(s) 125
HinP1I GCGC 1 cut(s) 125
HinfI GANTC 3 cut(s) 916, 930, 1188
HpaII CCGG 2 cut(s) 645, 817
HphI GGTGA 5 cut(s) 163, 422, 686, 701, 1399
Hpy166II GTNNAC 3 cut(s) 664, 1143, 1333
Hpy188I TCNGA 7 cut(s) 19, 27, 32, 58, 154, 1013, 1294
Hpy188III TCNNGA 6 cut(s) 8, 568, 714, 796, 1274, 1399
Hpy8I GTNNAC 3 cut(s) 664, 1143, 1333
HpyAV CCTTC 6 cut(s) 138, 148, 351, 373, 418, 1116
HpyCH4III ACNGT 1 cut(s) 674
HpyCH4IV ACGT 3 cut(s) 678, 800, 1025
HpyCH4V TGCA 7 cut(s) 4, 893, 1057, 1082, 1217, 1370, 1411
HpyF3I CTNAG 7 cut(s) 24, 73, 79, 85, 91, 97, 845
HpySE526I ACGT 3 cut(s) 678, 800, 1025
Hsp92I GRCGYC 2 cut(s) 48, 125
Hsp92II CATG 7 cut(s) 215, 742, 854, 992, 1061, 1115, 1438
HspAI GCGC 1 cut(s) 125
KasI GGCGCC 1 cut(s) 124
KpnI GGTACC 1 cut(s) 823
KspI CCGCGG 1 cut(s) 826
Kzo9I GATC 1 cut(s) 27
LguI GCTCTTC 1 cut(s) 497
LmnI GCTCC 1 cut(s) 1103
Lsp1109I GCAGC 6 cut(s) 173, 337, 1361, 1373, 1382, 1423
LweI GCATC 1 cut(s) 13
MaeI CTAG 4 cut(s) 435, 579, 1374, 1422
MaeII ACGT 3 cut(s) 678, 800, 1025
MaeIII GTNAC 6 cut(s) 674, 917, 998, 1172, 1342, 1427
MalI GATC 1 cut(s) 29
MbiI CCGCTC 1 cut(s) 744
MboI GATC 1 cut(s) 27
MboII GAAGA 6 cut(s) 45, 123, 126, 135, 439, 484
MlsI TGGCCA 1 cut(s) 545
MluCI AATT 5 cut(s) 176, 302, 692, 1440, 1446
MluNI TGGCCA 1 cut(s) 545
Mly113I GGCGCC 1 cut(s) 125
MlyI GAGTC 1 cut(s) 925
MmeI TCCRAC 1 cut(s) 177
Mox20I TGGCCA 1 cut(s) 545
Mph1103I ATGCAT 2 cut(s) 6, 1059
MroXI GAANNNNTTC 1 cut(s) 709
MscI TGGCCA 1 cut(s) 545
MseI TTAA 1 cut(s) 1245
MslI CAYNNNNRTG 3 cut(s) 924, 939, 1095
Msp20I TGGCCA 1 cut(s) 545
MspA1I CMGCKG 2 cut(s) 825, 1385
MspI CCGG 2 cut(s) 645, 817
MspR9I CCNGG 4 cut(s) 422, 542, 547, 646
Mva1269I GAATGC 1 cut(s) 1219
MvaI CCWGG 3 cut(s) 422, 542, 547
MvnI CGCG 2 cut(s) 616, 825
NarI GGCGCC 1 cut(s) 125
NciI CCSGG 1 cut(s) 646
NdeII GATC 1 cut(s) 27
NlaIII CATG 7 cut(s) 215, 742, 854, 992, 1061, 1115, 1438
NlaIV GGNNCC 2 cut(s) 126, 821
NmuCI GTSAC 5 cut(s) 674, 917, 998, 1172, 1427
NsiI ATGCAT 2 cut(s) 6, 1059
NspI RCATGY 1 cut(s) 1438
OliI CACNNNNGTG 1 cut(s) 924
PciSI GCTCTTC 1 cut(s) 497
PctI GAATGC 1 cut(s) 1219
PdmI GAANNNNTTC 1 cut(s) 709
PfeI GAWTC 2 cut(s) 930, 1188
PleI GAGTC 1 cut(s) 924
PluTI GGCGCC 1 cut(s) 128
PpsI GAGTC 1 cut(s) 924
Ppu21I YACGTR 1 cut(s) 1026
Psp6I CCWGG 3 cut(s) 420, 540, 545
PspGI CCWGG 3 cut(s) 420, 540, 545
PspN4I GGNNCC 2 cut(s) 126, 821
PspPI GGNCC 2 cut(s) 841, 1338
PstNI CAGNNNCTG 1 cut(s) 844
RsaI GTAC 3 cut(s) 821, 1142, 1260
RsaNI GTAC 3 cut(s) 820, 1141, 1259
RseI CAYNNNNRTG 3 cut(s) 924, 939, 1095
SacII CCGCGG 1 cut(s) 826
SapI GCTCTTC 1 cut(s) 497
SaqAI TTAA 1 cut(s) 1245
Sau3AI GATC 1 cut(s) 27
Sau96I GGNCC 2 cut(s) 841, 1338
ScaI AGTACT 1 cut(s) 1260
SchI GAGTC 1 cut(s) 925
ScrFI CCNGG 4 cut(s) 422, 542, 547, 646
SfaNI GCATC 1 cut(s) 13
SfoI GGCGCC 1 cut(s) 126
Sfr303I CCGCGG 1 cut(s) 826
SgrBI CCGCGG 1 cut(s) 826
SmiMI CAYNNNNRTG 3 cut(s) 924, 939, 1095
SmlI CTYRAG 2 cut(s) 566, 1164
SmoI CTYRAG 2 cut(s) 566, 1164
Sse9I AATT 5 cut(s) 176, 302, 692, 1440, 1446
SspDI GGCGCC 1 cut(s) 124
SspI AATATT 1 cut(s) 1040
SspMI CTAG 4 cut(s) 435, 579, 1374, 1422
StyD4I CCNGG 4 cut(s) 420, 540, 545, 644
StyI CCWWGG 1 cut(s) 994
TaaI ACNGT 1 cut(s) 674
TaiI ACGT 3 cut(s) 681, 803, 1028
TaqI TCGA 2 cut(s) 795, 1075
TasI AATT 5 cut(s) 176, 302, 692, 1440, 1446
TatI WGTACW 2 cut(s) 1140, 1258
TauI GCSGC 7 cut(s) 104, 107, 110, 384, 387, 485, 619
TfiI GAWTC 2 cut(s) 930, 1188
Tru1I TTAA 1 cut(s) 1245
Tru9I TTAA 1 cut(s) 1245
TscAI CASTG 3 cut(s) 883, 1181, 1432
TseFI GTSAC 5 cut(s) 674, 917, 998, 1172, 1427
TseI GCWGC 6 cut(s) 186, 350, 1349, 1361, 1370, 1411
Tsp45I GTSAC 5 cut(s) 674, 917, 998, 1172, 1427
TspDTI ATGAA 2 cut(s) 686, 1338
TspRI CASTG 3 cut(s) 883, 1181, 1432
XapI RAATTY 2 cut(s) 302, 692
XceI RCATGY 1 cut(s) 1438
XcmI CCANNNNNNNNNTGG 1 cut(s) 1013
XmnI GAANNNNTTC 1 cut(s) 709
XspI CTAG 4 cut(s) 435, 579, 1374, 1422
ZrmI AGTACT 1 cut(s) 1260
Zsp2I ATGCAT 2 cut(s) 6, 1059
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.