Rh7BG226000

Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0002779
Physical Location & Seq
Forward (+)
19453477 .. 19458868
5392 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG226000.1

Sequence Viewer

Length: 1176 bp
ATGACCCACATACCTTCTTCCCTATCCCACTCTGCCACTCTGTCTTCTCTGCACAATCACTATCATCACAACCATAGTCATTTGAATTCAGGCCCTTCTTCTTCTTCATCATCGTCTTCCACTTCTTTTCTCTGCTCTGCTTCGCTGGCAATCATTCCCTTTGCCACAAGGTCAGTTCTTCTGAAGCTTTTTCGCCATTTCCGGTGTGCCCATTTGCTCAGAGTCCACTCTCGCTTGATTGTTCTCCTTTTGGTGCCTTCCCTTTACTTCATCACAAGTCCTCGCCGTTCTTTCGTTCTTGATTTCCTCTCTGTGATAGCTTTCTCTGCTGCCATTCTCATTTCTATAAACATTGCACTGCCTCGTTTGGTCTCAATTCGCTTGTTTCTTGCCCGCTCCTTGCCGCTTTGCTCATCTTGTTACACCTCCAAGCTCAACAAGCCTCCTCCTCCGCCTGTGCTCTGGTCAATTGGGTCCAAGCCGAAATCGGAGAAGAGGCCGAACTCTGGGTCCTGGGTGCAGGTTTATAGTAATGGGGATGTTTATGAGGGTGAGTTTGATAAGGGGAAGTGTTCAGGAAGTGGGGTTTATTATTATAATATGAGTGGGAGGTATGAGGGTGATTGGGTGGATGAGAAGTATGATGGTCATGGTGTGGAGACTTGGGCAAGAGGGAGCCGTTATCGCGGGCAGTATAGGCAGGGCTTGAGGCATGGAATTGGGGTGTATAGGTTCTTCACCGGTGATGTTTACGCCGGAGAGTGGTCTAATGGGCAGTGTCATGGGTGTGGAATACATACTTGTGAGGATGGGAGCCGGTATGTTGGGGAGTTCAAGTGGGGTGTCAAACATGGACTTGGTCATTATCATTTCAGAAACGGAGACACGTATGCTGGGGAATATTTTGCTGACAAGATGCATGGTTTTGGAGTGTATCAGTTTGGAAATGGACATCGTTATGAAGGAGCCTGGCATGAAGGAAGAAAGCAGGGACTTGGTATGTACACTTTCAGAAATGGTGAAACACAATCTGGTCACTGGCAAAATGGGGTTATTGATCCCAGCATGCAGAATACCCATCCTGGATCCTCCTATGCTGTCAACCATGCCAAAGTTCTGAATACAGTCCAGGTAATTCTATATTATGCCCTTGCGGTAAAAAATAAAAAATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MORN

Protein Analysis

391

Amino Acids

43.79

Weight (kDa)

9.45

Isoelectric Point (pI)

36.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MORN PF02493 251 - 273 1.9e-06 MORN repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 597
Acc36I ACCTGC 1 cut(s) 511
AccB1I GGYRCC 1 cut(s) 253
AccBSI CCGCTC 1 cut(s) 396
AccII CGCG 1 cut(s) 687
AciI CCGC 5 cut(s) 394, 404, 452, 687, 1154
AclWI GGATC 3 cut(s) 1052, 1080, 1093
AcsI RAATTY 2 cut(s) 85, 1169
AcuI CTGAAG 1 cut(s) 203
AfaI GTAC 1 cut(s) 1004
AfiI CCNNNNNNNGG 2 cut(s) 506, 762
AflIII ACRYGT 1 cut(s) 885
AgeI ACCGGT 1 cut(s) 740
AgsI TTSAA 2 cut(s) 85, 835
AjnI CCWGG 4 cut(s) 512, 968, 1081, 1128
AloI GAACNNNNNNTCC 2 cut(s) 494, 526
AluBI AGCT 3 cut(s) 187, 320, 433
AluI AGCT 3 cut(s) 187, 320, 433
Alw21I GWGCWC 1 cut(s) 462
Alw26I GTCTC 3 cut(s) 376, 653, 876
AlwI GGATC 3 cut(s) 1052, 1080, 1093
AoxI GGCC 2 cut(s) 91, 497
ApeKI GCWGC 1 cut(s) 329
ApoI RAATTY 2 cut(s) 85, 1169
ArsI GACNNNNNNTTYG 2 cut(s) 494, 526
AsiGI ACCGGT 1 cut(s) 740
AspS9I GGNCC 3 cut(s) 92, 474, 510
AsuHPI GGTGA 5 cut(s) 563, 632, 730, 755, 1031
AvaII GGWCC 2 cut(s) 474, 510
BaeGI GKGCMC 1 cut(s) 211
BamHI GGATCC 1 cut(s) 1085
BanI GGYRCC 1 cut(s) 253
BarI GAAGNNNNNNTAC 2 cut(s) 719, 751
BbsI GAAGAC 2 cut(s) 36, 108
Bbv12I GWGCWC 1 cut(s) 462
BbvI GCAGC 1 cut(s) 316
BccI CCATC 3 cut(s) 638, 803, 1086
BceAI ACGGC 2 cut(s) 270, 663
BciT130I CCWGG 4 cut(s) 514, 970, 1083, 1130
BcoDI GTCTC 3 cut(s) 376, 653, 876
BfuAI ACCTGC 1 cut(s) 511
BisI GCNGC 2 cut(s) 330, 404
BlsI GCNGC 2 cut(s) 331, 405
Bme1390I CCNGG 4 cut(s) 514, 970, 1083, 1130
Bme18I GGWCC 2 cut(s) 474, 510
BmgT120I GGNCC 3 cut(s) 92, 474, 510
BmiI GGNNCC 7 cut(s) 255, 475, 511, 677, 815, 967, 1087
BmrFI CCNGG 4 cut(s) 514, 970, 1083, 1130
BmsI GCATC 1 cut(s) 906
BpiI GAAGAC 2 cut(s) 36, 108
BpuEI CTTGAG 1 cut(s) 727
BsaAI YACGTR 1 cut(s) 888
BsaI GGTCTC 1 cut(s) 376
BsaJI CCNNGG 1 cut(s) 513
BsaWI WCCGGW 2 cut(s) 201, 740
BsaXI ACNNNNNCTCC 2 cut(s) 821, 851
Bsc4I CCNNNNNNNGG 2 cut(s) 506, 762
Bse118I RCCGGY 2 cut(s) 740, 816
Bse1I ACTGG 1 cut(s) 1043
Bse3DI GCAATG 1 cut(s) 351
BseBI CCWGG 4 cut(s) 514, 970, 1083, 1130
BseDI CCNNGG 1 cut(s) 513
BseGI GGATG 4 cut(s) 544, 637, 814, 1078
BseLI CCNNNNNNNGG 2 cut(s) 506, 762
BseMI GCAATG 1 cut(s) 351
BseMII CTCAG 1 cut(s) 232
BseNI ACTGG 1 cut(s) 1043
BseRI GAGGAG 2 cut(s) 435, 438
BseSI GKGCMC 1 cut(s) 211
BseXI GCAGC 1 cut(s) 316
BseYI CCCAGC 2 cut(s) 893, 1061
BsgI GTGCAG 2 cut(s) 35, 539
Bsh1236I CGCG 1 cut(s) 687
BshFI GGCC 2 cut(s) 93, 499
BshNI GGYRCC 1 cut(s) 253
BshTI ACCGGT 1 cut(s) 740
BsiHKAI GWGCWC 1 cut(s) 462
BsiSI CCGG 4 cut(s) 202, 741, 756, 817
BslFI GGGAC 1 cut(s) 1005
BslI CCNNNNNNNGG 2 cut(s) 506, 762
BsmAI GTCTC 3 cut(s) 376, 653, 876
BsmFI GGGAC 1 cut(s) 1005
BsnI GGCC 2 cut(s) 93, 499
Bso31I GGTCTC 1 cut(s) 376
Bsp1286I GDGCHC 2 cut(s) 211, 462
Bsp1407I TGTACA 1 cut(s) 1002
Bsp143I GATC 2 cut(s) 1057, 1085
BspACI CCGC 5 cut(s) 394, 404, 452, 687, 1154
BspANI GGCC 2 cut(s) 93, 499
BspCNI CTCAG 1 cut(s) 231
BspFNI CGCG 1 cut(s) 687
BspLI GGNNCC 7 cut(s) 255, 475, 511, 677, 815, 967, 1087
BspMI ACCTGC 1 cut(s) 511
BspPI GGATC 3 cut(s) 1052, 1080, 1093
BspT107I GGYRCC 1 cut(s) 253
BspTNI GGTCTC 1 cut(s) 376
BsrBI CCGCTC 1 cut(s) 396
BsrDI GCAATG 1 cut(s) 351
BsrFI RCCGGY 2 cut(s) 740, 816
BsrGI TGTACA 1 cut(s) 1002
BsrI ACTGG 1 cut(s) 1043
BssAI RCCGGY 2 cut(s) 740, 816
BssECI CCNNGG 1 cut(s) 513
BssMI GATC 2 cut(s) 1057, 1085
Bst2UI CCWGG 4 cut(s) 514, 970, 1083, 1130
Bst4CI ACNGT 1 cut(s) 1126
Bst6I CTCTTC 1 cut(s) 488
BstAUI TGTACA 1 cut(s) 1002
BstBAI YACGTR 1 cut(s) 888
BstC8I GCNNGC 4 cut(s) 147, 394, 689, 1067
BstDEI CTNAG 1 cut(s) 218
BstF5I GGATG 4 cut(s) 544, 637, 814, 1078
BstFNI CGCG 1 cut(s) 687
BstKTI GATC 2 cut(s) 1060, 1088
BstMAI GTCTC 3 cut(s) 376, 653, 876
BstMBI GATC 2 cut(s) 1057, 1085
BstMWI GCNNNNNNNGC 5 cut(s) 146, 326, 439, 684, 697
BstNI CCWGG 4 cut(s) 514, 970, 1083, 1130
BstNSI RCATGY 1 cut(s) 1069
BstSCI CCNGG 4 cut(s) 512, 968, 1081, 1128
BstSLI GKGCMC 1 cut(s) 211
BstUI CGCG 1 cut(s) 687
BstV1I GCAGC 1 cut(s) 316
BstV2I GAAGAC 2 cut(s) 36, 108
BstX2I RGATCY 1 cut(s) 1085
BstYI RGATCY 1 cut(s) 1085
BsuRI GGCC 2 cut(s) 93, 499
BtsCI GGATG 4 cut(s) 544, 637, 814, 1078
BtsI GCAGTG 2 cut(s) 356, 782
BtsIMutI CAGTG 3 cut(s) 356, 782, 1036
BveI ACCTGC 1 cut(s) 511
Cac8I GCNNGC 4 cut(s) 147, 394, 689, 1067
Cfr10I RCCGGY 2 cut(s) 740, 816
Cfr13I GGNCC 3 cut(s) 92, 474, 510
Csp6I GTAC 1 cut(s) 1003
CspAI ACCGGT 1 cut(s) 740
CviAII CATG 8 cut(s) 650, 713, 782, 851, 920, 974, 1066, 1106
CviQI GTAC 1 cut(s) 1003
DdeI CTNAG 1 cut(s) 218
DpnI GATC 2 cut(s) 1059, 1087
DpnII GATC 2 cut(s) 1057, 1085
Eam1104I CTCTTC 1 cut(s) 488
EarI CTCTTC 1 cut(s) 488
EciI GGCGGA 1 cut(s) 441
Eco31I GGTCTC 1 cut(s) 376
Eco47I GGWCC 2 cut(s) 474, 510
Eco57I CTGAAG 1 cut(s) 203
EcoO109I RGGNCCY 2 cut(s) 92, 510
EcoRI GAATTC 1 cut(s) 85
EcoRII CCWGG 4 cut(s) 512, 968, 1081, 1128
EcoT22I ATGCAT 1 cut(s) 921
FaeI CATG 8 cut(s) 653, 716, 785, 854, 923, 977, 1069, 1109
FaqI GGGAC 1 cut(s) 1005
FatI CATG 8 cut(s) 649, 712, 781, 850, 919, 973, 1065, 1105
FauI CCCGC 2 cut(s) 401, 680
Fnu4HI GCNGC 2 cut(s) 330, 404
FokI GGATG 4 cut(s) 551, 644, 821, 1065
Fsp4HI GCNGC 2 cut(s) 330, 404
GluI GCNGC 2 cut(s) 330, 404
GsaI CCCAGC 2 cut(s) 897, 1065
HaeIII GGCC 2 cut(s) 93, 499
HapII CCGG 4 cut(s) 202, 741, 756, 817
Hin1II CATG 8 cut(s) 653, 716, 785, 854, 923, 977, 1069, 1109
HincII GTYRAC 1 cut(s) 1102
HindII GTYRAC 1 cut(s) 1102
HindIII AAGCTT 1 cut(s) 185
HinfI GANTC 1 cut(s) 222
HpaII CCGG 4 cut(s) 202, 741, 756, 817
HphI GGTGA 5 cut(s) 563, 632, 730, 755, 1031
Hpy166II GTNNAC 4 cut(s) 226, 751, 1005, 1102
Hpy188I TCNGA 7 cut(s) 183, 221, 490, 875, 1013, 1119, 1175
Hpy188III TCNNGA 2 cut(s) 299, 576
Hpy8I GTNNAC 4 cut(s) 226, 751, 1005, 1102
HpyAV CCTTC 5 cut(s) 24, 105, 267, 956, 971
HpyCH4III ACNGT 1 cut(s) 1126
HpyCH4IV ACGT 1 cut(s) 887
HpyCH4V TGCA 5 cut(s) 52, 356, 520, 919, 1069
HpyF10VI GCNNNNNNNGC 5 cut(s) 146, 326, 439, 684, 697
HpyF3I CTNAG 1 cut(s) 218
HpySE526I ACGT 1 cut(s) 887
Hsp92II CATG 8 cut(s) 653, 716, 785, 854, 923, 977, 1069, 1109
Kzo9I GATC 2 cut(s) 1057, 1085
LmnI GCTCC 4 cut(s) 401, 675, 813, 965
Lsp1109I GCAGC 1 cut(s) 316
LweI GCATC 1 cut(s) 906
MaeII ACGT 1 cut(s) 887
MaeIII GTNAC 2 cut(s) 419, 1034
MalI GATC 2 cut(s) 1059, 1087
MbiI CCGCTC 1 cut(s) 396
MboI GATC 2 cut(s) 1057, 1085
MfeI CAATTG 1 cut(s) 468
MflI RGATCY 1 cut(s) 1085
MhlI GDGCHC 2 cut(s) 211, 462
MluCI AATT 6 cut(s) 85, 375, 468, 717, 1134, 1169
MlyI GAGTC 1 cut(s) 231
Mph1103I ATGCAT 1 cut(s) 921
MslI CAYNNNNRTG 3 cut(s) 786, 801, 957
MspI CCGG 4 cut(s) 202, 741, 756, 817
MspR9I CCNGG 4 cut(s) 514, 970, 1083, 1130
MunI CAATTG 1 cut(s) 468
MvaI CCWGG 4 cut(s) 514, 970, 1083, 1130
MvnI CGCG 1 cut(s) 687
MwoI GCNNNNNNNGC 5 cut(s) 146, 326, 439, 684, 697
NdeII GATC 2 cut(s) 1057, 1085
NlaIII CATG 8 cut(s) 653, 716, 785, 854, 923, 977, 1069, 1109
NlaIV GGNNCC 7 cut(s) 255, 475, 511, 677, 815, 967, 1087
NmuCI GTSAC 1 cut(s) 1034
NsiI ATGCAT 1 cut(s) 921
NspI RCATGY 1 cut(s) 1069
PaeI GCATGC 1 cut(s) 1069
PflFI GACNNNGTC 1 cut(s) 858
PfoI TCCNGGA 1 cut(s) 1081
PinAI ACCGGT 1 cut(s) 740
PkrI GCNGC 2 cut(s) 331, 405
PleI GAGTC 1 cut(s) 230
PpsI GAGTC 1 cut(s) 230
Ppu21I YACGTR 1 cut(s) 888
PpuMI RGGWCCY 1 cut(s) 510
PsiI TTATAA 1 cut(s) 597
Psp5II RGGWCCY 1 cut(s) 510
Psp6I CCWGG 4 cut(s) 512, 968, 1081, 1128
PspFI CCCAGC 2 cut(s) 893, 1061
PspGI CCWGG 4 cut(s) 512, 968, 1081, 1128
PspN4I GGNNCC 7 cut(s) 255, 475, 511, 677, 815, 967, 1087
PspPI GGNCC 3 cut(s) 92, 474, 510
PspPPI RGGWCCY 1 cut(s) 510
PsuI RGATCY 1 cut(s) 1085
PsyI GACNNNGTC 1 cut(s) 858
RsaI GTAC 1 cut(s) 1004
RsaNI GTAC 1 cut(s) 1003
RseI CAYNNNNRTG 3 cut(s) 786, 801, 957
SatI GCNGC 2 cut(s) 330, 404
Sau3AI GATC 2 cut(s) 1057, 1085
Sau96I GGNCC 3 cut(s) 92, 474, 510
SchI GAGTC 1 cut(s) 231
ScrFI CCNGG 4 cut(s) 514, 970, 1083, 1130
SduI GDGCHC 2 cut(s) 211, 462
SfaNI GCATC 1 cut(s) 906
SgrAI CRCCGGYG 1 cut(s) 740
SinI GGWCC 2 cut(s) 474, 510
SmiMI CAYNNNNRTG 3 cut(s) 786, 801, 957
SmlI CTYRAG 1 cut(s) 706
SmoI CTYRAG 1 cut(s) 706
SphI GCATGC 1 cut(s) 1069
Sse9I AATT 6 cut(s) 85, 375, 468, 717, 1134, 1169
SsiI CCGC 5 cut(s) 394, 404, 452, 687, 1154
SspI AATATT 1 cut(s) 902
StyD4I CCNGG 4 cut(s) 512, 968, 1081, 1128
TaaI ACNGT 1 cut(s) 1126
TaiI ACGT 1 cut(s) 890
TasI AATT 6 cut(s) 85, 375, 468, 717, 1134, 1169
TatI WGTACW 1 cut(s) 1002
TauI GCSGC 1 cut(s) 406
TscAI CASTG 3 cut(s) 363, 782, 1043
TseFI GTSAC 1 cut(s) 1034
TseI GCWGC 1 cut(s) 329
Tsp45I GTSAC 1 cut(s) 1034
TspDTI ATGAA 4 cut(s) 96, 259, 975, 990
TspGWI ACGGA 1 cut(s) 894
TspRI CASTG 3 cut(s) 363, 782, 1043
Tth111I GACNNNGTC 1 cut(s) 858
VpaK11BI GGWCC 2 cut(s) 474, 510
XapI RAATTY 2 cut(s) 85, 1169
XceI RCATGY 1 cut(s) 1069
Zsp2I ATGCAT 1 cut(s) 921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.