AT3G11820

Belongs to the syntaxin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0001517
Physical Location & Seq
Reverse (-)
3729305 .. 3731251
1947 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G11820.2

Sequence Viewer

Length: 1041 bp
ATGAACGATTTGTTTTCCAGCTCATTCTCTCGCTTCCGCAGCGGAGAACCATCCCCTCGCCGAGACGTTGCCGGCGGTGGCGACGGAGTTCAGATGGCGAATCCCGCGGGATCAACCGGTGGTGTGAACCTCGACAAGTTCTTCGAAGATGTTGAATCTGTGAAAGAAGAGCTAAAGGAGCTAGATCGGCTCAACGAAACACTCTCTTCATGTCACGAGCAGAGCAAGACGCTTCACAATGCTAAAGCCGTTAAAGATCTCCGGTCTAAAATGGACGGTGACGTTGGAGTCGCGTTGAAGAAGGCGAAGATGATTAAAGTTAAACTCGAGGCGCTAGATCGTGCCAATGCTGCTAATCGGAGTCTCCCTGGCTGTGGACCTGGTTCTTCCTCCGATCGAACCAGGACCTCTGTCCTCAATGGTCTCAGGAAGAAATTGATGGACTCTATGGATAGTTTCAACCGATTGAGGGAGCTTATCTCGTCCGAGTATAGAGAAACTGTACAGAGGAGGTACTTCACCGTCACCGGCGAGAATCCGGATGAACGAACCCTAGATCGACTGATTTCCACTGGAGAGAGTGAGAGATTCTTGCAGAAAGCAATACAAGAACAAGGAAGAGGAAGGGTGTTAGACACCATTAACGAGATTCAAGAAAGGCATGATGCGGTTAAAGACATTGAGAAGAATCTCAGGGAGCTTCACCAGGTGTTTCTAGACATGGCCGTGCTGGTAGAGCACCAGGGAGCTCAGCTTGATGACATCGAGAGTCATGTGGGTCGAGCTAGCTCCTTTATCAGAGGCGGAACTGACCAGCTACAAACCGCTCGGGTTTACCAGAAGAACACGCGAAAATGGACATGTATTGCCATTATTATTCTCATCATCATCATAACTGTTGTGGTTCTTGCTGTTTTAAAACCGTGGAACAACAGCAGTGGCGGCGGCGGCGGTGGTGGTGGTGGGGGTACCACTGGAGGAAGTCAACCAAATTCAGGGACACCACCAAATCCTCCTCAGGCAAGGCGTCTATTGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0006605 GO:0006612 GO:0006810 GO:0006833 GO:0006886 GO:0006887 GO:0006906 GO:0006950 GO:0006952 GO:0006996 GO:0008104 GO:0008150 GO:0009504 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010119 GO:0010148 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0016050 GO:0016192 GO:0022406 GO:0030054 GO:0031201 GO:0031224 GO:0031347 GO:0031348 GO:0031984 GO:0032507 GO:0032940 GO:0032991 GO:0033036 GO:0033993 GO:0034613 GO:0042044 GO:0042221 GO:0042886 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043495 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045185 GO:0046903 GO:0046907 GO:0048278 GO:0048284 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051235 GO:0051640 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051707 GO:0055044 GO:0061024 GO:0061025 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0072657 GO:0072658 GO:0072659 GO:0072660 GO:0080134 GO:0090150 GO:0090174 GO:0097305 GO:0098542 GO:0098791 GO:0098796 GO:0140056 GO:1901700 GO:1990778
KEGG Pathways
Metabolic & Signaling
ko04130 ko04721 map04130 map04721
Pfam Domains
Protein Families
SNARE Syntaxin

Protein Analysis

346

Amino Acids

37.96

Weight (kDa)

9.06

Isoelectric Point (pI)

47.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Syntaxin PF00804 12 - 171 4e-50 Syntaxin
SNARE PF05739 220 - 271 7.8e-19 SNARE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 287
Acc65I GGTACC 1 cut(s) 968
AccB1I GGYRCC 1 cut(s) 968
AccBSI CCGCTC 1 cut(s) 827
AccII CGCG 3 cut(s) 107, 293, 850
AccIII TCCGGA 1 cut(s) 538
AclWI GGATC 1 cut(s) 118
AcoI YGGCCR 1 cut(s) 723
AcsI RAATTY 1 cut(s) 991
AcyI GRCGYC 1 cut(s) 1027
AdeI CACNNNGTG 1 cut(s) 709
AfaI GTAC 3 cut(s) 504, 515, 970
AfiI CCNNNNNNNGG 3 cut(s) 374, 469, 995
AflIII ACRYGT 1 cut(s) 860
AgeI ACCGGT 1 cut(s) 116
AgsI TTSAA 4 cut(s) 155, 298, 460, 653
AjnI CCWGG 5 cut(s) 367, 379, 401, 705, 741
Alw21I GWGCWC 2 cut(s) 741, 751
Alw26I GTCTC 3 cut(s) 57, 368, 428
AlwI GGATC 1 cut(s) 118
Ama87I CYCGRG 2 cut(s) 326, 828
Aor13HI TCCGGA 1 cut(s) 538
AoxI GGCC 1 cut(s) 723
ApeKI GCWGC 2 cut(s) 39, 350
ApoI RAATTY 1 cut(s) 991
ArsI GACNNNNNNTTYG 2 cut(s) 125, 157
AsiGI ACCGGT 1 cut(s) 116
Asp718I GGTACC 1 cut(s) 968
AspLEI GCGC 1 cut(s) 334
AspS9I GGNCC 2 cut(s) 377, 405
AsuHPI GGTGA 4 cut(s) 290, 511, 517, 695
AsuII TTCGAA 1 cut(s) 144
AsuNHI GCTAGC 1 cut(s) 785
AvaI CYCGRG 2 cut(s) 326, 828
AvaII GGWCC 2 cut(s) 377, 405
AxyI CCTNAGG 1 cut(s) 1017
BanI GGYRCC 1 cut(s) 968
BanII GRGCYC 1 cut(s) 751
BauI CACGAG 1 cut(s) 215
Bbv12I GWGCWC 2 cut(s) 741, 751
BbvI GCAGC 2 cut(s) 51, 337
BccI CCATC 3 cut(s) 58, 88, 433
BceAI ACGGC 2 cut(s) 233, 710
BciT130I CCWGG 5 cut(s) 369, 381, 403, 707, 743
BcoDI GTCTC 3 cut(s) 57, 368, 428
BfaI CTAG 5 cut(s) 182, 335, 554, 716, 786
BfoI RGCGCY 1 cut(s) 335
BglII AGATCT 1 cut(s) 256
BisI GCNGC 5 cut(s) 40, 351, 943, 946, 949
BlpI GCTNAGC 1 cut(s) 750
BlsI GCNGC 5 cut(s) 41, 352, 944, 947, 950
Bme1390I CCNGG 5 cut(s) 369, 381, 403, 707, 743
Bme18I GGWCC 2 cut(s) 377, 405
BmeT110I CYCGRG 2 cut(s) 326, 828
BmgT120I GGNCC 2 cut(s) 377, 405
BmiI GGNNCC 1 cut(s) 970
BmrFI CCNGG 5 cut(s) 369, 381, 403, 707, 743
BmsI GCATC 1 cut(s) 655
BmtI GCTAGC 1 cut(s) 789
BoxI GACNNNNGTC 1 cut(s) 410
BplI GAGNNNNNCTC 2 cut(s) 464, 496
BpmI CTGGAG 2 cut(s) 594, 996
Bpu1102I GCTNAGC 1 cut(s) 750
Bpu14I TTCGAA 1 cut(s) 144
BsaHI GRCGYC 1 cut(s) 1027
BsaI GGTCTC 1 cut(s) 428
BsaJI CCNNGG 4 cut(s) 105, 367, 742, 923
BsaWI WCCGGW 3 cut(s) 116, 261, 538
Bsc4I CCNNNNNNNGG 3 cut(s) 374, 469, 995
Bse118I RCCGGY 3 cut(s) 71, 116, 527
Bse1I ACTGG 2 cut(s) 577, 979
Bse21I CCTNAGG 1 cut(s) 1017
BseAI TCCGGA 1 cut(s) 538
BseBI CCWGG 5 cut(s) 369, 381, 403, 707, 743
BseDI CCNNGG 4 cut(s) 105, 367, 742, 923
BseGI GGATG 2 cut(s) 50, 547
BseLI CCNNNNNNNGG 3 cut(s) 374, 469, 995
BseMII CTCAG 4 cut(s) 439, 706, 764, 1031
BseNI ACTGG 2 cut(s) 577, 979
BseRI GAGGAG 2 cut(s) 523, 1005
BseXI GCAGC 2 cut(s) 51, 337
Bsh1236I CGCG 3 cut(s) 107, 293, 850
Bsh1285I CGRYCG 1 cut(s) 397
BshFI GGCC 1 cut(s) 725
BshNI GGYRCC 1 cut(s) 968
BshTI ACCGGT 1 cut(s) 116
BsiEI CGRYCG 1 cut(s) 397
BsiHKAI GWGCWC 2 cut(s) 741, 751
BsiHKCI CYCGRG 2 cut(s) 326, 828
BsiSI CCGG 5 cut(s) 72, 117, 262, 528, 539
BslFI GGGAC 1 cut(s) 1012
BslI CCNNNNNNNGG 3 cut(s) 374, 469, 995
BsmAI GTCTC 3 cut(s) 57, 368, 428
BsmBI CGTCTC 1 cut(s) 57
BsmFI GGGAC 1 cut(s) 1012
BsnI GGCC 1 cut(s) 725
Bso31I GGTCTC 1 cut(s) 428
BsoBI CYCGRG 2 cut(s) 326, 828
Bsp119I TTCGAA 1 cut(s) 144
Bsp1286I GDGCHC 2 cut(s) 741, 751
Bsp13I TCCGGA 1 cut(s) 538
Bsp1407I TGTACA 1 cut(s) 502
Bsp143I GATC 6 cut(s) 110, 184, 256, 337, 394, 556
Bsp1720I GCTNAGC 1 cut(s) 750
BspANI GGCC 1 cut(s) 725
BspCNI CTCAG 4 cut(s) 438, 705, 763, 1030
BspEI TCCGGA 1 cut(s) 538
BspFNI CGCG 3 cut(s) 107, 293, 850
BspLI GGNNCC 1 cut(s) 970
BspOI GCTAGC 1 cut(s) 789
BspPI GGATC 1 cut(s) 118
BspQI GCTCTTC 1 cut(s) 162
BspT104I TTCGAA 1 cut(s) 144
BspT107I GGYRCC 1 cut(s) 968
BspTNI GGTCTC 1 cut(s) 428
BsrBI CCGCTC 1 cut(s) 827
BsrFI RCCGGY 3 cut(s) 71, 116, 527
BsrGI TGTACA 1 cut(s) 502
BsrI ACTGG 2 cut(s) 577, 979
BssAI RCCGGY 3 cut(s) 71, 116, 527
BssECI CCNNGG 4 cut(s) 105, 367, 742, 923
BssMI GATC 6 cut(s) 110, 184, 256, 337, 394, 556
BssNI GRCGYC 1 cut(s) 1027
BssSI CACGAG 1 cut(s) 215
Bst2BI CACGAG 1 cut(s) 215
Bst2UI CCWGG 5 cut(s) 369, 381, 403, 707, 743
Bst4CI ACNGT 5 cut(s) 278, 502, 523, 898, 924
Bst6I CTCTTC 3 cut(s) 162, 211, 613
BstACI GRCGYC 1 cut(s) 1027
BstAUI TGTACA 1 cut(s) 502
BstBI TTCGAA 1 cut(s) 144
BstC8I GCNNGC 2 cut(s) 73, 787
BstDEI CTNAG 4 cut(s) 425, 692, 750, 1017
BstDSI CCRYGG 2 cut(s) 105, 923
BstF5I GGATG 2 cut(s) 50, 547
BstFNI CGCG 3 cut(s) 107, 293, 850
BstH2I RGCGCY 1 cut(s) 335
BstHHI GCGC 1 cut(s) 334
BstKTI GATC 6 cut(s) 113, 187, 259, 340, 397, 559
BstMAI GTCTC 3 cut(s) 57, 368, 428
BstMBI GATC 6 cut(s) 110, 184, 256, 337, 394, 556
BstMCI CGRYCG 1 cut(s) 397
BstMWI GCNNNNNNNGC 9 cut(s) 39, 104, 178, 187, 350, 736, 942, 948, 1033
BstNI CCWGG 5 cut(s) 369, 381, 403, 707, 743
BstNSI RCATGY 1 cut(s) 864
BstPAI GACNNNNGTC 1 cut(s) 410
BstSCI CCNGG 5 cut(s) 367, 379, 401, 705, 741
BstUI CGCG 3 cut(s) 107, 293, 850
BstV1I GCAGC 2 cut(s) 51, 337
BstX2I RGATCY 1 cut(s) 256
BstYI RGATCY 1 cut(s) 256
Bsu36I CCTNAGG 1 cut(s) 1017
BsuRI GGCC 1 cut(s) 725
BtgI CCRYGG 2 cut(s) 105, 923
BtsCI GGATG 2 cut(s) 50, 547
BtsI GCAGTG 1 cut(s) 943
BtsIMutI CAGTG 3 cut(s) 570, 943, 972
Cac8I GCNNGC 2 cut(s) 73, 787
CfoI GCGC 1 cut(s) 334
Cfr10I RCCGGY 3 cut(s) 71, 116, 527
Cfr13I GGNCC 2 cut(s) 377, 405
Cfr42I CCGCGG 1 cut(s) 108
CseI GACGC 2 cut(s) 238, 1016
CsiI ACCWGGT 2 cut(s) 379, 705
Csp6I GTAC 3 cut(s) 503, 514, 969
CspAI ACCGGT 1 cut(s) 116
CspCI CAANNNNNGTGG 2 cut(s) 919, 954
CviAII CATG 5 cut(s) 210, 662, 721, 773, 861
CviQI GTAC 3 cut(s) 503, 514, 969
DdeI CTNAG 4 cut(s) 425, 692, 750, 1017
DpnI GATC 6 cut(s) 112, 186, 258, 339, 396, 558
DpnII GATC 6 cut(s) 110, 184, 256, 337, 394, 556
DraI TTTAAA 1 cut(s) 918
DraIII CACNNNGTG 1 cut(s) 709
DrdI GACNNNNNNGTC 1 cut(s) 287
DseDI GACNNNNNNGTC 1 cut(s) 287
EaeI YGGCCR 1 cut(s) 723
Eam1104I CTCTTC 3 cut(s) 162, 211, 613
EarI CTCTTC 3 cut(s) 162, 211, 613
EciI GGCGGA 1 cut(s) 819
Ecl136II GAGCTC 1 cut(s) 749
Eco24I GRGCYC 1 cut(s) 751
Eco31I GGTCTC 1 cut(s) 428
Eco47I GGWCC 2 cut(s) 377, 405
Eco53kI GAGCTC 1 cut(s) 749
Eco81I CCTNAGG 1 cut(s) 1017
Eco88I CYCGRG 2 cut(s) 326, 828
EcoICRI GAGCTC 1 cut(s) 749
EcoO109I RGGNCCY 1 cut(s) 405
EcoRII CCWGG 5 cut(s) 367, 379, 401, 705, 741
EcoT38I GRGCYC 1 cut(s) 751
Esp3I CGTCTC 1 cut(s) 57
FaeI CATG 5 cut(s) 213, 665, 724, 776, 864
FaiI YATR 8 cut(s) 211, 449, 492, 663, 722, 774, 862, 893
FaqI GGGAC 1 cut(s) 1012
FatI CATG 5 cut(s) 209, 661, 720, 772, 860
FauI CCCGC 2 cut(s) 100, 112
Fnu4HI GCNGC 5 cut(s) 40, 351, 943, 946, 949
FokI GGATG 2 cut(s) 37, 554
FriOI GRGCYC 1 cut(s) 751
Fsp4HI GCNGC 5 cut(s) 40, 351, 943, 946, 949
FspBI CTAG 5 cut(s) 182, 335, 554, 716, 786
GlaI GCGC 1 cut(s) 333
GluI GCNGC 5 cut(s) 40, 351, 943, 946, 949
GsuI CTGGAG 2 cut(s) 594, 996
HaeII RGCGCY 1 cut(s) 335
HaeIII GGCC 1 cut(s) 725
HapII CCGG 5 cut(s) 72, 117, 262, 528, 539
HgaI GACGC 2 cut(s) 238, 1016
HhaI GCGC 1 cut(s) 334
Hin1I GRCGYC 1 cut(s) 1027
Hin1II CATG 5 cut(s) 213, 665, 724, 776, 864
Hin6I GCGC 1 cut(s) 332
HinP1I GCGC 1 cut(s) 332
HincII GTYRAC 1 cut(s) 986
HindII GTYRAC 1 cut(s) 986
HpaII CCGG 5 cut(s) 72, 117, 262, 528, 539
HphI GGTGA 4 cut(s) 290, 511, 517, 695
Hpy166II GTNNAC 4 cut(s) 127, 377, 835, 986
Hpy188I TCNGA 5 cut(s) 93, 360, 394, 487, 800
Hpy188III TCNNGA 6 cut(s) 215, 427, 539, 653, 716, 766
Hpy8I GTNNAC 4 cut(s) 127, 377, 835, 986
Hpy99I CGWCG 1 cut(s) 86
HpyAV CCTTC 2 cut(s) 295, 618
HpyCH4III ACNGT 5 cut(s) 278, 502, 523, 898, 924
HpyCH4IV ACGT 2 cut(s) 66, 282
HpyCH4V TGCA 1 cut(s) 595
HpyF10VI GCNNNNNNNGC 9 cut(s) 39, 104, 178, 187, 350, 736, 942, 948, 1033
HpyF3I CTNAG 4 cut(s) 425, 692, 750, 1017
HpySE526I ACGT 2 cut(s) 66, 282
Hsp92I GRCGYC 1 cut(s) 1027
Hsp92II CATG 5 cut(s) 213, 665, 724, 776, 864
HspAI GCGC 1 cut(s) 332
Kpn2I TCCGGA 1 cut(s) 538
KpnI GGTACC 1 cut(s) 972
KroI GCCGGC 1 cut(s) 71
KroNI GCCGGC 1 cut(s) 73
KspI CCGCGG 1 cut(s) 108
Kzo9I GATC 6 cut(s) 110, 184, 256, 337, 394, 556
LguI GCTCTTC 1 cut(s) 162
LmnI GCTCC 5 cut(s) 178, 472, 697, 746, 794
Lsp1109I GCAGC 2 cut(s) 51, 337
LweI GCATC 1 cut(s) 655
MabI ACCWGGT 2 cut(s) 379, 705
MaeI CTAG 5 cut(s) 182, 335, 554, 716, 786
MaeII ACGT 2 cut(s) 66, 282
MaeIII GTNAC 3 cut(s) 212, 278, 523
MalI GATC 6 cut(s) 112, 186, 258, 339, 396, 558
MbiI CCGCTC 1 cut(s) 827
MboI GATC 6 cut(s) 110, 184, 256, 337, 394, 556
MflI RGATCY 1 cut(s) 256
MhlI GDGCHC 2 cut(s) 741, 751
MluCI AATT 2 cut(s) 434, 991
MlyI GAGTC 4 cut(s) 297, 370, 437, 778
MmeI TCCRAC 1 cut(s) 265
MroI TCCGGA 1 cut(s) 538
MroNI GCCGGC 1 cut(s) 71
MseI TTAA 6 cut(s) 252, 315, 321, 642, 672, 917
MslI CAYNNNNRTG 1 cut(s) 725
MspA1I CMGCKG 2 cut(s) 42, 107
MspI CCGG 5 cut(s) 72, 117, 262, 528, 539
MspR9I CCNGG 5 cut(s) 369, 381, 403, 707, 743
MvaI CCWGG 5 cut(s) 369, 381, 403, 707, 743
MvnI CGCG 3 cut(s) 107, 293, 850
MwoI GCNNNNNNNGC 9 cut(s) 39, 104, 178, 187, 350, 736, 942, 948, 1033
NaeI GCCGGC 1 cut(s) 73
NdeII GATC 6 cut(s) 110, 184, 256, 337, 394, 556
NgoMIV GCCGGC 1 cut(s) 71
NheI GCTAGC 1 cut(s) 785
NlaIII CATG 5 cut(s) 213, 665, 724, 776, 864
NlaIV GGNNCC 1 cut(s) 970
NmeAIII GCCGAG 1 cut(s) 86
NmuCI GTSAC 3 cut(s) 212, 278, 523
NspI RCATGY 1 cut(s) 864
NspV TTCGAA 1 cut(s) 144
PaeR7I CTCGAG 1 cut(s) 326
PciI ACATGT 1 cut(s) 860
PciSI GCTCTTC 1 cut(s) 162
PdiI GCCGGC 1 cut(s) 73
PfeI GAWTC 6 cut(s) 100, 155, 535, 588, 649, 688
PinAI ACCGGT 1 cut(s) 116
PkrI GCNGC 5 cut(s) 41, 352, 944, 947, 950
Ple19I CGATCG 1 cut(s) 397
PleI GAGTC 4 cut(s) 296, 369, 437, 777
PpsI GAGTC 4 cut(s) 296, 369, 437, 777
PpuMI RGGWCCY 1 cut(s) 405
PscI ACATGT 1 cut(s) 860
PshAI GACNNNNGTC 1 cut(s) 410
Psp124BI GAGCTC 1 cut(s) 751
Psp5II RGGWCCY 1 cut(s) 405
Psp6I CCWGG 5 cut(s) 367, 379, 401, 705, 741
PspGI CCWGG 5 cut(s) 367, 379, 401, 705, 741
PspN4I GGNNCC 1 cut(s) 970
PspPI GGNCC 2 cut(s) 377, 405
PspPPI RGGWCCY 1 cut(s) 405
PspXI VCTCGAGB 1 cut(s) 326
PsuI RGATCY 1 cut(s) 256
PvuI CGATCG 1 cut(s) 397
RsaI GTAC 3 cut(s) 504, 515, 970
RsaNI GTAC 3 cut(s) 503, 514, 969
RseI CAYNNNNRTG 1 cut(s) 725
SacI GAGCTC 1 cut(s) 751
SacII CCGCGG 1 cut(s) 108
SapI GCTCTTC 1 cut(s) 162
SaqAI TTAA 6 cut(s) 252, 315, 321, 642, 672, 917
SatI GCNGC 5 cut(s) 40, 351, 943, 946, 949
Sau3AI GATC 6 cut(s) 110, 184, 256, 337, 394, 556
Sau96I GGNCC 2 cut(s) 377, 405
SchI GAGTC 4 cut(s) 297, 370, 437, 778
ScrFI CCNGG 5 cut(s) 369, 381, 403, 707, 743
SduI GDGCHC 2 cut(s) 741, 751
SexAI ACCWGGT 2 cut(s) 379, 705
SfaNI GCATC 1 cut(s) 655
Sfr274I CTCGAG 1 cut(s) 326
Sfr303I CCGCGG 1 cut(s) 108
SfuI TTCGAA 1 cut(s) 144
SgrAI CRCCGGYG 1 cut(s) 527
SgrBI CCGCGG 1 cut(s) 108
SinI GGWCC 2 cut(s) 377, 405
SlaI CTCGAG 1 cut(s) 326
SmiMI CAYNNNNRTG 1 cut(s) 725
SmlI CTYRAG 1 cut(s) 326
SmoI CTYRAG 1 cut(s) 326
Sse9I AATT 2 cut(s) 434, 991
SspMI CTAG 5 cut(s) 182, 335, 554, 716, 786
SstI GAGCTC 1 cut(s) 751
StyD4I CCNGG 5 cut(s) 367, 379, 401, 705, 741
TaaI ACNGT 5 cut(s) 278, 502, 523, 898, 924
TaiI ACGT 2 cut(s) 69, 285
TaqI TCGA 7 cut(s) 132, 144, 327, 397, 559, 765, 781
TasI AATT 2 cut(s) 434, 991
TatI WGTACW 1 cut(s) 502
TauI GCSGC 3 cut(s) 945, 948, 951
TfiI GAWTC 6 cut(s) 100, 155, 535, 588, 649, 688
Tru1I TTAA 6 cut(s) 252, 315, 321, 642, 672, 917
Tru9I TTAA 6 cut(s) 252, 315, 321, 642, 672, 917
TscAI CASTG 3 cut(s) 577, 943, 979
TseFI GTSAC 3 cut(s) 212, 278, 523
TseI GCWGC 2 cut(s) 39, 350
Tsp45I GTSAC 3 cut(s) 212, 278, 523
TspDTI ATGAA 3 cut(s) 17, 198, 558
TspGWI ACGGA 1 cut(s) 99
TspRI CASTG 3 cut(s) 577, 943, 979
VpaK11BI GGWCC 2 cut(s) 377, 405
XapI RAATTY 1 cut(s) 991
XbaI TCTAGA 1 cut(s) 715
XceI RCATGY 1 cut(s) 864
XhoI CTCGAG 1 cut(s) 326
XspI CTAG 5 cut(s) 182, 335, 554, 716, 786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.