MD14G1040900.v1.1

Belongs to the syntaxin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0001517
Physical Location & Seq
Forward (+)
3860756 .. 3861816
1061 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1040900.v1.1.491

Sequence Viewer

Length: 978 bp
ATGAACGATTTGTTCTCCGGCTCCTTCTCGCGGTTCCGGAGCGAGGAGCAGTCGCCGCGGCGCGACGATCACGTCATCGAGATGGGGTCGACGGCGGGGTCGGGCGCCGCCGGAGTCAACCTCGACAAGTTCTTCGCCGACGTCGAGTCCGTCAAGGACGAGCTCAAGGAGCTCGAGCGCGTCTACTTCAGCCTCCAGTCCTCCCACGAGAAGAGCAAGACGCTCCACAACGCCACCGCCGTCAAGGACCTCCGATCCCGCATGGACGCTGACGTCACCCTCGCCCTCAAGAAGGCCAAGGTGCTCAAGGTCCGCCTGGAGGCGCTCGACCGGTCCAACGCCGCTAACCGGAGCCTGCCGAACTGCGGGCCGGGGTCGTCCTCGGACCGGACTCGGATCTCCGTCGTCAACGGCCTCCGGAAGAAGCTCAAGGACTCCATGGACAGCTTCAACGCTCTCAGGCAGAAGATCTCGTCCGAGTACCGCGAGACCGTACAGCGGAGGTACTACACCGTCTCCGGCGAAAATCCCGACGAGAAGACCTTAGACCTCCTCATCTCCACCGAGAGCGAAACGTTTCTGCAGAAGGCAATACAGGAGCAAGGGAGGGGCCAAGTCCTCGACACGATCCAGGAGATCCAGGAGCGACACGACGCCGTAAAGGACATGGAGAGGAACCTGCAGGAGCTGCACCAGGTGTTCCTGGACATGGCGGTGCTGGTGCAGGCGCAGGGGGAGCAGATCGACGACATCGAAAACCACGTCATGAGAGCCAACTCGTTCGTCAGCAGAGGCACGCAGCAGCTCACCAAGGCCAGGGCCTCCCAGAAGAACACCCGCAAGTGGACTTGCTACGCCATTATTCTGCTGCTCGTGATTATTCTGATCGTGATCCTCAGCTTGAAGCCGTGGAATTGGGGCAATGGCGGTGGCAATAACAACAATAGTAATAGCAATAATCCGCCGCCGCCAGCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0006605 GO:0006612 GO:0006810 GO:0006833 GO:0006886 GO:0006887 GO:0006906 GO:0006950 GO:0006952 GO:0006996 GO:0008104 GO:0008150 GO:0009504 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010119 GO:0010148 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0016050 GO:0016192 GO:0022406 GO:0030054 GO:0031201 GO:0031224 GO:0031347 GO:0031348 GO:0031984 GO:0032507 GO:0032940 GO:0032991 GO:0033036 GO:0033993 GO:0034613 GO:0042044 GO:0042221 GO:0042886 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043495 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045185 GO:0046903 GO:0046907 GO:0048278 GO:0048284 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051235 GO:0051640 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051707 GO:0055044 GO:0061024 GO:0061025 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0072657 GO:0072658 GO:0072659 GO:0072660 GO:0080134 GO:0090150 GO:0090174 GO:0097305 GO:0098542 GO:0098791 GO:0098796 GO:0140056 GO:1901700 GO:1990778
KEGG Pathways
Metabolic & Signaling
ko04130 ko04721 map04130 map04721
Pfam Domains
Protein Families
SNARE Syntaxin

Protein Analysis

326

Amino Acids

36.54

Weight (kDa)

8.41

Isoelectric Point (pI)

43.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Syntaxin PF00804 40 - 198 1.8e-50 Syntaxin
SNARE PF05739 246 - 298 1.3e-19 SNARE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 71, 97, 272
AatII GACGTC 2 cut(s) 144, 276
Acc36I ACCTGC 1 cut(s) 687
AccB1I GGYRCC 1 cut(s) 104
AccI GTMKAC 2 cut(s) 89, 183
AccII CGCG 5 cut(s) 31, 58, 63, 180, 486
AccIII TCCGGA 2 cut(s) 36, 417
AclI AACGTT 1 cut(s) 575
AclWI GGATC 5 cut(s) 249, 404, 622, 631, 886
AcuI CTGAAG 1 cut(s) 172
AcyI GRCGYC 4 cut(s) 105, 141, 273, 654
AdeI CACNNNGTG 1 cut(s) 697
AfaI GTAC 3 cut(s) 482, 495, 506
AgeI ACCGGT 1 cut(s) 330
AgsI TTSAA 2 cut(s) 451, 904
AhdI GACNNNNNGTC 1 cut(s) 145
AjiI CACGTC 2 cut(s) 73, 763
AjnI CCWGG 6 cut(s) 315, 630, 639, 693, 702, 815
AluBI AGCT 7 cut(s) 163, 172, 427, 447, 688, 805, 900
AluI AGCT 7 cut(s) 163, 172, 427, 447, 688, 805, 900
Alw21I GWGCWC 3 cut(s) 165, 174, 306
Alw26I GTCTC 2 cut(s) 482, 520
AlwI GGATC 5 cut(s) 249, 404, 622, 631, 886
AlwNI CAGNNNCTG 1 cut(s) 688
Ama87I CYCGRG 1 cut(s) 173
Aor13HI TCCGGA 2 cut(s) 36, 417
AoxI GGCC 6 cut(s) 294, 368, 412, 610, 813, 819
ApeKI GCWGC 4 cut(s) 688, 799, 802, 868
ArsI GACNNNNNNTTYG 4 cut(s) 116, 148, 747, 779
AsiGI ACCGGT 1 cut(s) 330
Asp700I GAANNNNTTC 1 cut(s) 576
AspLEI GCGC 5 cut(s) 63, 107, 180, 325, 730
AspS9I GGNCC 7 cut(s) 247, 310, 333, 368, 385, 610, 819
AsuC2I CCSGG 1 cut(s) 372
AsuHPI GGTGA 2 cut(s) 268, 799
AvaI CYCGRG 1 cut(s) 173
AvaII GGWCC 4 cut(s) 247, 310, 333, 385
BanI GGYRCC 1 cut(s) 104
BanII GRGCYC 2 cut(s) 165, 174
BauI CACGAG 2 cut(s) 206, 872
BbsI GAAGAC 1 cut(s) 545
Bbv12I GWGCWC 3 cut(s) 165, 174, 306
BbvCI CCTCAGC 1 cut(s) 896
BbvI GCAGC 4 cut(s) 675, 811, 814, 855
BccI CCATC 1 cut(s) 76
BceAI ACGGC 5 cut(s) 108, 224, 427, 641, 892
BciT130I CCWGG 6 cut(s) 317, 632, 641, 695, 704, 817
BcnI CCSGG 1 cut(s) 372
BcoDI GTCTC 2 cut(s) 482, 520
BfmI CTRYAG 2 cut(s) 581, 680
BfoI RGCGCY 2 cut(s) 108, 326
BfuAI ACCTGC 1 cut(s) 687
BglII AGATCT 1 cut(s) 468
Bme1390I CCNGG 7 cut(s) 317, 372, 632, 641, 695, 704, 817
Bme18I GGWCC 4 cut(s) 247, 310, 333, 385
BmeRI GACNNNNNGTC 1 cut(s) 145
BmeT110I CYCGRG 1 cut(s) 173
BmgBI CACGTC 2 cut(s) 73, 763
BmgT120I GGNCC 7 cut(s) 247, 310, 333, 368, 385, 610, 819
BmiI GGNNCC 6 cut(s) 22, 35, 106, 353, 611, 677
BmrFI CCNGG 7 cut(s) 317, 372, 632, 641, 695, 704, 817
BpiI GAAGAC 1 cut(s) 545
BplI GAGNNNNNCTC 2 cut(s) 105, 137
BpmI CTGGAG 2 cut(s) 179, 338
Bpu10I CCTNAGC 1 cut(s) 896
BpuEI CTTGAG 4 cut(s) 149, 272, 290, 413
BpuMI CCSGG 1 cut(s) 372
BsaBI GATNNNNATC 1 cut(s) 890
BsaHI GRCGYC 4 cut(s) 105, 141, 273, 654
BsaI GGTCTC 1 cut(s) 482
BsaJI CCNNGG 8 cut(s) 56, 297, 371, 381, 438, 810, 816, 908
BsaWI WCCGGW 5 cut(s) 36, 330, 348, 387, 417
BsaXI ACNNNNNCTCC 2 cut(s) 500, 530
Bse118I RCCGGY 1 cut(s) 330
Bse1I ACTGG 1 cut(s) 196
Bse3DI GCAATG 1 cut(s) 928
Bse8I GATNNNNATC 1 cut(s) 890
BseAI TCCGGA 2 cut(s) 36, 417
BseBI CCWGG 6 cut(s) 317, 632, 641, 695, 704, 817
BseDI CCNNGG 8 cut(s) 56, 297, 371, 381, 438, 810, 816, 908
BseJI GATNNNNATC 1 cut(s) 890
BseMI GCAATG 1 cut(s) 928
BseMII CTCAG 2 cut(s) 472, 910
BseNI ACTGG 1 cut(s) 196
BseRI GAGGAG 2 cut(s) 59, 542
BseXI GCAGC 4 cut(s) 675, 811, 814, 855
BsgI GTGCAG 2 cut(s) 674, 743
Bsh1236I CGCG 5 cut(s) 31, 58, 63, 180, 486
Bsh1285I CGRYCG 1 cut(s) 331
BshFI GGCC 6 cut(s) 296, 370, 414, 612, 815, 821
BshNI GGYRCC 1 cut(s) 104
BshTI ACCGGT 1 cut(s) 330
BsiEI CGRYCG 1 cut(s) 331
BsiHKAI GWGCWC 3 cut(s) 165, 174, 306
BsiHKCI CYCGRG 1 cut(s) 173
BsiSI CCGG 9 cut(s) 18, 37, 111, 331, 349, 371, 388, 418, 519
BsmAI GTCTC 2 cut(s) 482, 520
BsmBI CGTCTC 1 cut(s) 520
BsnI GGCC 6 cut(s) 296, 370, 414, 612, 815, 821
Bso31I GGTCTC 1 cut(s) 482
BsoBI CYCGRG 1 cut(s) 173
Bsp1286I GDGCHC 3 cut(s) 165, 174, 306
Bsp13I TCCGGA 2 cut(s) 36, 417
Bsp143I GATC 9 cut(s) 67, 254, 396, 468, 627, 636, 741, 885, 891
Bsp19I CCATGG 1 cut(s) 438
BspANI GGCC 6 cut(s) 296, 370, 414, 612, 815, 821
BspCNI CTCAG 2 cut(s) 471, 909
BspEI TCCGGA 2 cut(s) 36, 417
BspFNI CGCG 5 cut(s) 31, 58, 63, 180, 486
BspHI TCATGA 1 cut(s) 765
BspLI GGNNCC 6 cut(s) 22, 35, 106, 353, 611, 677
BspMAI CTGCAG 2 cut(s) 585, 684
BspMI ACCTGC 1 cut(s) 687
BspPI GGATC 5 cut(s) 249, 404, 622, 631, 886
BspQI GCTCTTC 1 cut(s) 206
BspT107I GGYRCC 1 cut(s) 104
BspTNI GGTCTC 1 cut(s) 482
BsrDI GCAATG 1 cut(s) 928
BsrFI RCCGGY 1 cut(s) 330
BsrI ACTGG 1 cut(s) 196
BssAI RCCGGY 1 cut(s) 330
BssECI CCNNGG 8 cut(s) 56, 297, 371, 381, 438, 810, 816, 908
BssMI GATC 9 cut(s) 67, 254, 396, 468, 627, 636, 741, 885, 891
BssNI GRCGYC 4 cut(s) 105, 141, 273, 654
BssSI CACGAG 2 cut(s) 206, 872
BssT1I CCWWGG 3 cut(s) 297, 438, 810
Bst2BI CACGAG 2 cut(s) 206, 872
Bst2UI CCWGG 6 cut(s) 317, 632, 641, 695, 704, 817
Bst4CI ACNGT 2 cut(s) 493, 514
Bst6I CTCTTC 1 cut(s) 206
BstACI GRCGYC 4 cut(s) 105, 141, 273, 654
BstAPI GCANNNNNTGC 1 cut(s) 688
BstC8I GCNNGC 5 cut(s) 356, 368, 726, 797, 972
BstDEI CTNAG 3 cut(s) 458, 544, 896
BstDSI CCRYGG 3 cut(s) 56, 438, 908
BstENI CCTNNNNNAGG 1 cut(s) 290
BstFNI CGCG 5 cut(s) 31, 58, 63, 180, 486
BstH2I RGCGCY 2 cut(s) 108, 326
BstHHI GCGC 5 cut(s) 63, 107, 180, 325, 730
BstKTI GATC 9 cut(s) 70, 257, 399, 471, 630, 639, 744, 888, 894
BstMAI GTCTC 2 cut(s) 482, 520
BstMBI GATC 9 cut(s) 67, 254, 396, 468, 627, 636, 741, 885, 891
BstMCI CGRYCG 1 cut(s) 331
BstMWI GCNNNNNNNGC 4 cut(s) 55, 169, 688, 736
BstNI CCWGG 6 cut(s) 317, 632, 641, 695, 704, 817
BstSCI CCNGG 7 cut(s) 315, 370, 630, 639, 693, 702, 815
BstSFI CTRYAG 2 cut(s) 581, 680
BstUI CGCG 5 cut(s) 31, 58, 63, 180, 486
BstV1I GCAGC 4 cut(s) 675, 811, 814, 855
BstV2I GAAGAC 1 cut(s) 545
BstX2I RGATCY 3 cut(s) 396, 468, 636
BstYI RGATCY 3 cut(s) 396, 468, 636
BsuRI GGCC 6 cut(s) 296, 370, 414, 612, 815, 821
BtgI CCRYGG 3 cut(s) 56, 438, 908
BtrI CACGTC 2 cut(s) 73, 763
BveI ACCTGC 1 cut(s) 687
Cac8I GCNNGC 5 cut(s) 356, 368, 726, 797, 972
CaiI CAGNNNCTG 1 cut(s) 688
CciI TCATGA 1 cut(s) 765
CfoI GCGC 5 cut(s) 63, 107, 180, 325, 730
Cfr10I RCCGGY 1 cut(s) 330
Cfr13I GGNCC 7 cut(s) 247, 310, 333, 368, 385, 610, 819
Cfr42I CCGCGG 1 cut(s) 59
CpoI CGGWCCG 1 cut(s) 385
CseI GACGC 4 cut(s) 169, 229, 275, 662
CsiI ACCWGGT 1 cut(s) 693
Csp6I GTAC 3 cut(s) 481, 494, 505
CspAI ACCGGT 1 cut(s) 330
CspCI CAANNNNNGTGG 2 cut(s) 910, 945
CspI CGGWCCG 1 cut(s) 385
CviAII CATG 5 cut(s) 262, 439, 667, 709, 766
CviQI GTAC 3 cut(s) 481, 494, 505
DdeI CTNAG 3 cut(s) 458, 544, 896
DinI GGCGCC 1 cut(s) 106
DpnI GATC 9 cut(s) 69, 256, 398, 470, 629, 638, 743, 887, 893
DpnII GATC 9 cut(s) 67, 254, 396, 468, 627, 636, 741, 885, 891
DraIII CACNNNGTG 1 cut(s) 697
DrdI GACNNNNNNGTC 3 cut(s) 71, 97, 272
DriI GACNNNNNGTC 1 cut(s) 145
DseDI GACNNNNNNGTC 3 cut(s) 71, 97, 272
Eam1104I CTCTTC 1 cut(s) 206
Eam1105I GACNNNNNGTC 1 cut(s) 145
EarI CTCTTC 1 cut(s) 206
EciI GGCGGA 2 cut(s) 302, 951
Ecl136II GAGCTC 2 cut(s) 163, 172
Eco130I CCWWGG 3 cut(s) 297, 438, 810
Eco24I GRGCYC 2 cut(s) 165, 174
Eco31I GGTCTC 1 cut(s) 482
Eco47I GGWCC 4 cut(s) 247, 310, 333, 385
Eco53kI GAGCTC 2 cut(s) 163, 172
Eco57I CTGAAG 1 cut(s) 172
Eco88I CYCGRG 1 cut(s) 173
EcoICRI GAGCTC 2 cut(s) 163, 172
EcoNI CCTNNNNNAGG 1 cut(s) 290
EcoO109I RGGNCCY 2 cut(s) 247, 819
EcoRII CCWGG 6 cut(s) 315, 630, 639, 693, 702, 815
EcoT14I CCWWGG 3 cut(s) 297, 438, 810
EcoT38I GRGCYC 2 cut(s) 165, 174
EgeI GGCGCC 1 cut(s) 106
EheI GGCGCC 1 cut(s) 106
ErhI CCWWGG 3 cut(s) 297, 438, 810
Esp3I CGTCTC 1 cut(s) 520
FaeI CATG 5 cut(s) 265, 442, 670, 712, 769
FaiI YATR 5 cut(s) 263, 440, 668, 710, 767
FatI CATG 5 cut(s) 261, 438, 666, 708, 765
FauI CCCGC 4 cut(s) 88, 266, 359, 845
FblI GTMKAC 2 cut(s) 89, 183
FriOI GRGCYC 2 cut(s) 165, 174
GlaI GCGC 5 cut(s) 62, 106, 179, 324, 729
GsuI CTGGAG 2 cut(s) 179, 338
HaeII RGCGCY 2 cut(s) 108, 326
HaeIII GGCC 6 cut(s) 296, 370, 414, 612, 815, 821
HapII CCGG 9 cut(s) 18, 37, 111, 331, 349, 371, 388, 418, 519
HgaI GACGC 4 cut(s) 169, 229, 275, 662
HhaI GCGC 5 cut(s) 63, 107, 180, 325, 730
Hin1I GRCGYC 4 cut(s) 105, 141, 273, 654
Hin1II CATG 5 cut(s) 265, 442, 670, 712, 769
Hin6I GCGC 5 cut(s) 61, 105, 178, 323, 728
HinP1I GCGC 5 cut(s) 61, 105, 178, 323, 728
HincII GTYRAC 3 cut(s) 90, 118, 409
HindII GTYRAC 3 cut(s) 90, 118, 409
HinfI GANTC 4 cut(s) 114, 146, 391, 434
HpaII CCGG 9 cut(s) 18, 37, 111, 331, 349, 371, 388, 418, 519
HphI GGTGA 2 cut(s) 268, 799
Hpy166II GTNNAC 5 cut(s) 90, 118, 184, 409, 846
Hpy188I TCNGA 5 cut(s) 254, 385, 396, 478, 885
Hpy188III TCNNGA 8 cut(s) 37, 79, 289, 418, 530, 766, 874, 889
Hpy8I GTNNAC 5 cut(s) 90, 118, 184, 409, 846
Hpy99I CGWCG 8 cut(s) 68, 94, 143, 146, 407, 536, 656, 749
HpyAV CCTTC 3 cut(s) 34, 286, 580
HpyCH4III ACNGT 2 cut(s) 493, 514
HpyCH4IV ACGT 5 cut(s) 72, 141, 273, 575, 762
HpyCH4V TGCA 4 cut(s) 583, 682, 691, 724
HpyF10VI GCNNNNNNNGC 4 cut(s) 55, 169, 688, 736
HpyF3I CTNAG 3 cut(s) 458, 544, 896
HpySE526I ACGT 5 cut(s) 72, 141, 273, 575, 762
Hsp92I GRCGYC 4 cut(s) 105, 141, 273, 654
Hsp92II CATG 5 cut(s) 265, 442, 670, 712, 769
HspAI GCGC 5 cut(s) 61, 105, 178, 323, 728
KasI GGCGCC 1 cut(s) 104
Kpn2I TCCGGA 2 cut(s) 36, 417
KspI CCGCGG 1 cut(s) 59
Kzo9I GATC 9 cut(s) 67, 254, 396, 468, 627, 636, 741, 885, 891
LguI GCTCTTC 1 cut(s) 206
Lsp1109I GCAGC 4 cut(s) 675, 811, 814, 855
MabI ACCWGGT 1 cut(s) 693
MaeII ACGT 5 cut(s) 72, 141, 273, 575, 762
MaeIII GTNAC 1 cut(s) 274
MalI GATC 9 cut(s) 69, 256, 398, 470, 629, 638, 743, 887, 893
MboI GATC 9 cut(s) 67, 254, 396, 468, 627, 636, 741, 885, 891
MboII GAAGA 6 cut(s) 124, 223, 433, 478, 550, 841
MflI RGATCY 3 cut(s) 396, 468, 636
MhlI GDGCHC 3 cut(s) 165, 174, 306
MluCI AATT 1 cut(s) 913
Mly113I GGCGCC 1 cut(s) 105
MlyI GAGTC 4 cut(s) 123, 155, 385, 428
MmeI TCCRAC 1 cut(s) 360
MroI TCCGGA 2 cut(s) 36, 417
MroXI GAANNNNTTC 1 cut(s) 576
MslI CAYNNNNRTG 2 cut(s) 80, 713
MspA1I CMGCKG 2 cut(s) 58, 499
MspI CCGG 9 cut(s) 18, 37, 111, 331, 349, 371, 388, 418, 519
MspR9I CCNGG 7 cut(s) 317, 372, 632, 641, 695, 704, 817
MvaI CCWGG 6 cut(s) 317, 632, 641, 695, 704, 817
MvnI CGCG 5 cut(s) 31, 58, 63, 180, 486
MwoI GCNNNNNNNGC 4 cut(s) 55, 169, 688, 736
NarI GGCGCC 1 cut(s) 105
NciI CCSGG 1 cut(s) 372
NcoI CCATGG 1 cut(s) 438
NdeII GATC 9 cut(s) 67, 254, 396, 468, 627, 636, 741, 885, 891
NlaIII CATG 5 cut(s) 265, 442, 670, 712, 769
NlaIV GGNNCC 6 cut(s) 22, 35, 106, 353, 611, 677
NmuCI GTSAC 1 cut(s) 274
PaeR7I CTCGAG 1 cut(s) 173
PagI TCATGA 1 cut(s) 765
PciSI GCTCTTC 1 cut(s) 206
PcsI WCGNNNNNNNCGW 5 cut(s) 141, 147, 237, 750, 759
PdmI GAANNNNTTC 1 cut(s) 576
PfoI TCCNGGA 3 cut(s) 630, 639, 702
PinAI ACCGGT 1 cut(s) 330
PleI GAGTC 4 cut(s) 122, 154, 385, 428
PluTI GGCGCC 1 cut(s) 108
PpsI GAGTC 4 cut(s) 122, 154, 385, 428
PpuMI RGGWCCY 1 cut(s) 247
Psp124BI GAGCTC 2 cut(s) 165, 174
Psp1406I AACGTT 1 cut(s) 575
Psp5II RGGWCCY 1 cut(s) 247
Psp6I CCWGG 6 cut(s) 315, 630, 639, 693, 702, 815
PspGI CCWGG 6 cut(s) 315, 630, 639, 693, 702, 815
PspN4I GGNNCC 6 cut(s) 22, 35, 106, 353, 611, 677
PspPI GGNCC 7 cut(s) 247, 310, 333, 368, 385, 610, 819
PspPPI RGGWCCY 1 cut(s) 247
PspXI VCTCGAGB 1 cut(s) 173
PstI CTGCAG 2 cut(s) 585, 684
PstNI CAGNNNCTG 1 cut(s) 688
PsuI RGATCY 3 cut(s) 396, 468, 636
RsaI GTAC 3 cut(s) 482, 495, 506
RsaNI GTAC 3 cut(s) 481, 494, 505
RseI CAYNNNNRTG 2 cut(s) 80, 713
Rsr2I CGGWCCG 1 cut(s) 385
RsrII CGGWCCG 1 cut(s) 385
SacI GAGCTC 2 cut(s) 165, 174
SacII CCGCGG 1 cut(s) 59
SalI GTCGAC 1 cut(s) 88
SapI GCTCTTC 1 cut(s) 206
Sau3AI GATC 9 cut(s) 67, 254, 396, 468, 627, 636, 741, 885, 891
Sau96I GGNCC 7 cut(s) 247, 310, 333, 368, 385, 610, 819
SbfI CCTGCAGG 1 cut(s) 684
SchI GAGTC 4 cut(s) 123, 155, 385, 428
ScrFI CCNGG 7 cut(s) 317, 372, 632, 641, 695, 704, 817
SdaI CCTGCAGG 1 cut(s) 684
SduI GDGCHC 3 cut(s) 165, 174, 306
SexAI ACCWGGT 1 cut(s) 693
SfcI CTRYAG 2 cut(s) 581, 680
SfoI GGCGCC 1 cut(s) 106
Sfr274I CTCGAG 1 cut(s) 173
Sfr303I CCGCGG 1 cut(s) 59
SgrBI CCGCGG 1 cut(s) 59
SinI GGWCC 4 cut(s) 247, 310, 333, 385
SlaI CTCGAG 1 cut(s) 173
SmiMI CAYNNNNRTG 2 cut(s) 80, 713
SmlI CTYRAG 5 cut(s) 164, 173, 287, 305, 428
SmoI CTYRAG 5 cut(s) 164, 173, 287, 305, 428
Sse8387I CCTGCAGG 1 cut(s) 684
Sse9I AATT 1 cut(s) 913
SspDI GGCGCC 1 cut(s) 104
SstI GAGCTC 2 cut(s) 165, 174
StyD4I CCNGG 7 cut(s) 315, 370, 630, 639, 693, 702, 815
StyI CCWWGG 3 cut(s) 297, 438, 810
TaaI ACNGT 2 cut(s) 493, 514
TaiI ACGT 5 cut(s) 75, 144, 276, 578, 765
TaqI TCGA 9 cut(s) 78, 89, 123, 144, 174, 327, 621, 744, 753
TasI AATT 1 cut(s) 913
TauI GCSGC 6 cut(s) 58, 61, 110, 344, 967, 970
TseFI GTSAC 1 cut(s) 274
TseI GCWGC 4 cut(s) 688, 799, 802, 868
Tsp45I GTSAC 1 cut(s) 274
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 139, 391
VpaK11BI GGWCC 4 cut(s) 247, 310, 333, 385
XagI CCTNNNNNAGG 1 cut(s) 290
XhoI CTCGAG 1 cut(s) 173
XmiI GTMKAC 2 cut(s) 89, 183
XmnI GAANNNNTTC 1 cut(s) 576
ZraI GACGTC 2 cut(s) 142, 274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.