Rroxscaffold_6G00405400

Belongs to the syntaxin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0001517
Physical Location & Seq
Reverse (-)
27775638 .. 27777104
1467 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00405400.1

Sequence Viewer

Length: 987 bp
ATGAACGACCTGTTTTCCGGCTCCTTCTCCAGGTTCCGCGGCGAACCCGACAACAACGACGAGCACGTCATCGAGATGTCGTCGTCGACGGCGTCCGGCACCGGCACCGGTACCGGAGTCAACCTCGACAAGTTCTTCGGCGACGTCGAGTCCGTCAAGGACGACCTCAAGGAGCTGGAGCGCATCCACCAGAACCTCCAGTCCGCTCACGAGCAGAGCAAGACTCTCCACAACGCCAACACCGTCAAGGACCTCCGATCTCGCATGGACGCTGACGTCACTCTCGCTCTCAAGAAGGCGAAGGTGATCAAGGTCCGCCTCGAGGCGCTGGACCGGTCCAACGCCGCGAACCGGGGCCTGCCGGGCTGCGGGCCGGGGTCGTCGTCGGACCGGACCAGGATCTCCGTCGTCAACGGGCTTAGGAAGAAGCTCAAGGACTCCATGGACAGCTTCAACTCCCTCCGCCAGAAGATCTCGCTCGAGTACAGAGAGACCGTCCAGCGCAGGTACTACACCGTCTCCGGCGAGAATCCCGACGAGAAGACGCTCGACCTCCTCATCTCCACAGGGCAGAGCGAAACGTTTCTGCAGAAGGCGATCCAGGAGCAAGGGCGGGGGCAGGTGCTGGACACGATCAACGAGATCCAGGAGCGGCACGACGCCGTGAAGGACATGGAGAAGAATCTGCATGAGCTGCACCAGGTGTTCATGGACATGGCGGTGTTGGTCCAAGCCCAGGGGGAGCAGCTCGACGACATCGAGAGCCACGTGCAGCGAGCCAGCTCCTTCGTCAGGGGTGGGACGCAGTCGCTGGGGAAGGCCAGGGTGTACCAGAAGAACACCCGAAAGTGGACTTGCTTTCTAATCATACTATTGCTGGTGATTGCTTTGATTATAATATTGAGTTTGAAGCCGTGGAATTGGGGCGGCGGCGGAGGAGGAGGAGGTGGCAATAACTCCACTCCAGCACCGCCACCGCCGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0001101 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0006605 GO:0006612 GO:0006810 GO:0006833 GO:0006886 GO:0006887 GO:0006906 GO:0006950 GO:0006952 GO:0006996 GO:0008104 GO:0008150 GO:0009504 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010119 GO:0010148 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0016050 GO:0016192 GO:0022406 GO:0030054 GO:0031201 GO:0031224 GO:0031347 GO:0031348 GO:0031984 GO:0032507 GO:0032940 GO:0032991 GO:0033036 GO:0033993 GO:0034613 GO:0042044 GO:0042221 GO:0042886 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043495 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0045185 GO:0046903 GO:0046907 GO:0048278 GO:0048284 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051235 GO:0051640 GO:0051641 GO:0051649 GO:0051651 GO:0051704 GO:0051707 GO:0055044 GO:0061024 GO:0061025 GO:0065007 GO:0065008 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0071944 GO:0072657 GO:0072658 GO:0072659 GO:0072660 GO:0080134 GO:0090150 GO:0090174 GO:0097305 GO:0098542 GO:0098791 GO:0098796 GO:0140056 GO:1901700 GO:1990778
KEGG Pathways
Metabolic & Signaling
ko04130 ko04721 map04130 map04721
Pfam Domains
Protein Families
SNARE Syntaxin

Protein Analysis

328

Amino Acids

36.25

Weight (kDa)

7.11

Isoelectric Point (pI)

37.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Syntaxin PF00804 41 - 200 2.7e-51 Syntaxin
SNARE PF05739 248 - 300 1.5e-18 SNARE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 896
AarI CACCTGC 1 cut(s) 610
AasI GACNNNNNNGTC 2 cut(s) 65, 275
AatII GACGTC 2 cut(s) 147, 279
AbsI CCTCGAGG 1 cut(s) 320
Acc36I ACCTGC 2 cut(s) 495, 610
Acc65I GGTACC 1 cut(s) 110
AccB1I GGYRCC 3 cut(s) 98, 104, 110
AccBSI CCGCTC 2 cut(s) 206, 652
AccI GTMKAC 1 cut(s) 86
AccII CGCG 2 cut(s) 39, 347
AclI AACGTT 1 cut(s) 581
AclWI GGATC 3 cut(s) 407, 592, 637
AcvI CACGTG 1 cut(s) 769
AcyI GRCGYC 4 cut(s) 92, 144, 276, 660
AdeI CACNNNGTG 1 cut(s) 703
AfaI GTAC 4 cut(s) 112, 485, 509, 830
AfiI CCNNNNNNNGG 7 cut(s) 30, 322, 351, 368, 736, 792, 849
AgeI ACCGGT 2 cut(s) 107, 333
AgsI TTSAA 2 cut(s) 454, 910
AhdI GACNNNNNGTC 1 cut(s) 148
AjiI CACGTC 1 cut(s) 67
AjnI CCWGG 7 cut(s) 29, 395, 600, 645, 699, 735, 821
AloI GAACNNNNNNTCC 2 cut(s) 185, 217
AluBI AGCT 6 cut(s) 175, 430, 450, 694, 748, 783
AluI AGCT 6 cut(s) 175, 430, 450, 694, 748, 783
Alw21I GWGCWC 1 cut(s) 66
Alw26I GTCTC 2 cut(s) 485, 523
AlwI GGATC 3 cut(s) 407, 592, 637
AlwNI CAGNNNCTG 2 cut(s) 625, 811
Ama87I CYCGRG 2 cut(s) 320, 479
AoxI GGCC 3 cut(s) 355, 371, 819
ApeKI GCWGC 4 cut(s) 366, 694, 745, 772
ArsI GACNNNNNNTTYG 2 cut(s) 119, 151
AsiGI ACCGGT 2 cut(s) 107, 333
Asp700I GAANNNNTTC 1 cut(s) 582
Asp718I GGTACC 1 cut(s) 110
AspLEI GCGC 3 cut(s) 183, 328, 504
AspS9I GGNCC 9 cut(s) 250, 313, 331, 336, 355, 371, 388, 393, 727
AsuC2I CCSGG 3 cut(s) 353, 363, 375
AsuHPI GGTGA 2 cut(s) 316, 892
AvaI CYCGRG 2 cut(s) 320, 479
AvaII GGWCC 7 cut(s) 250, 313, 331, 336, 388, 393, 727
BaeI ACNNNNGTAYC 2 cut(s) 102, 135
BanI GGYRCC 3 cut(s) 98, 104, 110
BauI CACGAG 1 cut(s) 209
BbrPI CACGTG 1 cut(s) 769
BbsI GAAGAC 1 cut(s) 548
Bbv12I GWGCWC 1 cut(s) 66
BbvI GCAGC 4 cut(s) 353, 681, 757, 784
BceAI ACGGC 3 cut(s) 105, 647, 898
BciT130I CCWGG 7 cut(s) 31, 397, 602, 647, 701, 737, 823
BclI TGATCA 1 cut(s) 306
BcnI CCSGG 3 cut(s) 353, 363, 375
BcoDI GTCTC 2 cut(s) 485, 523
BfmI CTRYAG 1 cut(s) 587
BfoI RGCGCY 1 cut(s) 329
BfuAI ACCTGC 2 cut(s) 495, 610
BglI GCCNNNNNGGC 1 cut(s) 363
BglII AGATCT 1 cut(s) 471
BisI GCNGC 9 cut(s) 40, 345, 367, 653, 695, 746, 773, 928, 931
BlsI GCNGC 9 cut(s) 41, 346, 368, 654, 696, 747, 774, 929, 932
Bme18I GGWCC 7 cut(s) 250, 313, 331, 336, 388, 393, 727
BmeRI GACNNNNNGTC 1 cut(s) 148
BmeT110I CYCGRG 2 cut(s) 320, 479
BmgBI CACGTC 1 cut(s) 67
BmgT120I GGNCC 9 cut(s) 250, 313, 331, 336, 355, 371, 388, 393, 727
BmiI GGNNCC 6 cut(s) 22, 35, 100, 106, 112, 356
BmsI GCATC 1 cut(s) 192
BpiI GAAGAC 1 cut(s) 548
BplI GAGNNNNNCTC 4 cut(s) 108, 140, 208, 240
BpmI CTGGAG 4 cut(s) 13, 182, 197, 948
Bpu10I CCTNAGC 1 cut(s) 419
BpuEI CTTGAG 3 cut(s) 152, 275, 416
BpuMI CCSGG 3 cut(s) 353, 363, 375
BsaAI YACGTR 1 cut(s) 769
BsaHI GRCGYC 4 cut(s) 92, 144, 276, 660
BsaI GGTCTC 1 cut(s) 485
BsaJI CCNNGG 8 cut(s) 37, 352, 374, 441, 735, 736, 822, 914
BsaWI WCCGGW 4 cut(s) 107, 113, 333, 390
BsaXI ACNNNNNCTCC 2 cut(s) 503, 533
Bsc4I CCNNNNNNNGG 7 cut(s) 30, 322, 351, 368, 736, 792, 849
Bse118I RCCGGY 4 cut(s) 101, 107, 333, 979
Bse1I ACTGG 1 cut(s) 199
BseBI CCWGG 7 cut(s) 31, 397, 602, 647, 701, 737, 823
BseDI CCNNGG 8 cut(s) 37, 352, 374, 441, 735, 736, 822, 914
BseGI GGATG 1 cut(s) 183
BseLI CCNNNNNNNGG 7 cut(s) 30, 322, 351, 368, 736, 792, 849
BseNI ACTGG 1 cut(s) 199
BseRI GAGGAG 4 cut(s) 545, 951, 954, 957
BseXI GCAGC 4 cut(s) 353, 681, 757, 784
BseYI CCCAGC 1 cut(s) 811
BsgI GTGCAG 2 cut(s) 680, 791
Bsh1236I CGCG 2 cut(s) 39, 347
BshFI GGCC 3 cut(s) 357, 373, 821
BshNI GGYRCC 3 cut(s) 98, 104, 110
BshTI ACCGGT 2 cut(s) 107, 333
BsiHKAI GWGCWC 1 cut(s) 66
BsiHKCI CYCGRG 2 cut(s) 320, 479
BslFI GGGAC 1 cut(s) 814
BslI CCNNNNNNNGG 7 cut(s) 30, 322, 351, 368, 736, 792, 849
BsmAI GTCTC 2 cut(s) 485, 523
BsmBI CGTCTC 1 cut(s) 523
BsmFI GGGAC 1 cut(s) 814
BsnI GGCC 3 cut(s) 357, 373, 821
Bso31I GGTCTC 1 cut(s) 485
BsoBI CYCGRG 2 cut(s) 320, 479
Bsp1286I GDGCHC 1 cut(s) 66
Bsp143I GATC 7 cut(s) 257, 306, 399, 471, 597, 633, 642
Bsp19I CCATGG 1 cut(s) 441
BspANI GGCC 3 cut(s) 357, 373, 821
BspFNI CGCG 2 cut(s) 39, 347
BspLI GGNNCC 6 cut(s) 22, 35, 100, 106, 112, 356
BspMAI CTGCAG 1 cut(s) 591
BspMI ACCTGC 2 cut(s) 495, 610
BspPI GGATC 3 cut(s) 407, 592, 637
BspT107I GGYRCC 3 cut(s) 98, 104, 110
BspTNI GGTCTC 1 cut(s) 485
BsrBI CCGCTC 2 cut(s) 206, 652
BsrFI RCCGGY 4 cut(s) 101, 107, 333, 979
BsrI ACTGG 1 cut(s) 199
BssAI RCCGGY 4 cut(s) 101, 107, 333, 979
BssECI CCNNGG 8 cut(s) 37, 352, 374, 441, 735, 736, 822, 914
BssMI GATC 7 cut(s) 257, 306, 399, 471, 597, 633, 642
BssNI GRCGYC 4 cut(s) 92, 144, 276, 660
BssSI CACGAG 1 cut(s) 209
BssT1I CCWWGG 1 cut(s) 441
Bst2BI CACGAG 1 cut(s) 209
Bst2UI CCWGG 7 cut(s) 31, 397, 602, 647, 701, 737, 823
Bst4CI ACNGT 3 cut(s) 244, 496, 517
BstACI GRCGYC 4 cut(s) 92, 144, 276, 660
BstAPI GCANNNNNTGC 1 cut(s) 694
BstBAI YACGTR 1 cut(s) 769
BstC8I GCNNGC 5 cut(s) 359, 371, 777, 781, 981
BstDEI CTNAG 1 cut(s) 419
BstDSI CCRYGG 3 cut(s) 37, 441, 914
BstENI CCTNNNNNAGG 2 cut(s) 28, 790
BstF5I GGATG 1 cut(s) 183
BstFNI CGCG 2 cut(s) 39, 347
BstH2I RGCGCY 1 cut(s) 329
BstHHI GCGC 3 cut(s) 183, 328, 504
BstKTI GATC 7 cut(s) 260, 309, 402, 474, 600, 636, 645
BstMAI GTCTC 2 cut(s) 485, 523
BstMBI GATC 7 cut(s) 257, 306, 399, 471, 597, 633, 642
BstMWI GCNNNNNNNGC 2 cut(s) 363, 694
BstNI CCWGG 7 cut(s) 31, 397, 602, 647, 701, 737, 823
BstSFI CTRYAG 1 cut(s) 587
BstUI CGCG 2 cut(s) 39, 347
BstV1I GCAGC 4 cut(s) 353, 681, 757, 784
BstV2I GAAGAC 1 cut(s) 548
BstX2I RGATCY 3 cut(s) 399, 471, 642
BstYI RGATCY 3 cut(s) 399, 471, 642
BsuRI GGCC 3 cut(s) 357, 373, 821
BtgI CCRYGG 3 cut(s) 37, 441, 914
BtrI CACGTC 1 cut(s) 67
BtsCI GGATG 1 cut(s) 183
BveI ACCTGC 2 cut(s) 495, 610
Cac8I GCNNGC 5 cut(s) 359, 371, 777, 781, 981
CaiI CAGNNNCTG 2 cut(s) 625, 811
CfoI GCGC 3 cut(s) 183, 328, 504
Cfr10I RCCGGY 4 cut(s) 101, 107, 333, 979
Cfr13I GGNCC 9 cut(s) 250, 313, 331, 336, 355, 371, 388, 393, 727
Cfr42I CCGCGG 1 cut(s) 40
CpoI CGGWCCG 1 cut(s) 388
CseI GACGC 5 cut(s) 81, 278, 553, 668, 811
CsiI ACCWGGT 1 cut(s) 699
Csp6I GTAC 4 cut(s) 111, 484, 508, 829
CspAI ACCGGT 2 cut(s) 107, 333
CspI CGGWCCG 1 cut(s) 388
CviAII CATG 6 cut(s) 265, 442, 673, 689, 709, 715
CviQI GTAC 4 cut(s) 111, 484, 508, 829
DdeI CTNAG 1 cut(s) 419
DpnI GATC 7 cut(s) 259, 308, 401, 473, 599, 635, 644
DpnII GATC 7 cut(s) 257, 306, 399, 471, 597, 633, 642
DraIII CACNNNGTG 1 cut(s) 703
DrdI GACNNNNNNGTC 2 cut(s) 65, 275
DriI GACNNNNNGTC 1 cut(s) 148
DseDI GACNNNNNNGTC 2 cut(s) 65, 275
Eam1105I GACNNNNNGTC 1 cut(s) 148
EciI GGCGGA 3 cut(s) 305, 452, 948
Eco130I CCWWGG 1 cut(s) 441
Eco31I GGTCTC 1 cut(s) 485
Eco47I GGWCC 7 cut(s) 250, 313, 331, 336, 388, 393, 727
Eco72I CACGTG 1 cut(s) 769
Eco88I CYCGRG 2 cut(s) 320, 479
EcoNI CCTNNNNNAGG 2 cut(s) 28, 790
EcoO109I RGGNCCY 2 cut(s) 250, 355
EcoRII CCWGG 7 cut(s) 29, 395, 600, 645, 699, 735, 821
EcoT14I CCWWGG 1 cut(s) 441
ErhI CCWWGG 1 cut(s) 441
Esp3I CGTCTC 1 cut(s) 523
FaeI CATG 6 cut(s) 268, 445, 676, 692, 712, 718
FaiI YATR 9 cut(s) 266, 443, 674, 690, 710, 716, 869, 896, 985
FaqI GGGAC 1 cut(s) 814
FatI CATG 6 cut(s) 264, 441, 672, 688, 708, 714
FauI CCCGC 2 cut(s) 362, 606
FbaI TGATCA 1 cut(s) 306
FblI GTMKAC 1 cut(s) 86
Fnu4HI GCNGC 9 cut(s) 40, 345, 367, 653, 695, 746, 773, 928, 931
FokI GGATG 1 cut(s) 170
Fsp4HI GCNGC 9 cut(s) 40, 345, 367, 653, 695, 746, 773, 928, 931
GlaI GCGC 3 cut(s) 182, 327, 503
GluI GCNGC 9 cut(s) 40, 345, 367, 653, 695, 746, 773, 928, 931
GsaI CCCAGC 1 cut(s) 815
GsuI CTGGAG 4 cut(s) 13, 182, 197, 948
HaeII RGCGCY 1 cut(s) 329
HaeIII GGCC 3 cut(s) 357, 373, 821
HgaI GACGC 5 cut(s) 81, 278, 553, 668, 811
HhaI GCGC 3 cut(s) 183, 328, 504
Hin1I GRCGYC 4 cut(s) 92, 144, 276, 660
Hin1II CATG 6 cut(s) 268, 445, 676, 692, 712, 718
Hin6I GCGC 3 cut(s) 181, 326, 502
HinP1I GCGC 3 cut(s) 181, 326, 502
HincII GTYRAC 3 cut(s) 87, 121, 412
HindII GTYRAC 3 cut(s) 87, 121, 412
HinfI GANTC 6 cut(s) 117, 149, 223, 437, 529, 682
HphI GGTGA 2 cut(s) 316, 892
Hpy166II GTNNAC 5 cut(s) 87, 121, 412, 829, 852
Hpy188I TCNGA 2 cut(s) 257, 388
Hpy188III TCNNGA 5 cut(s) 73, 209, 292, 533, 760
Hpy8I GTNNAC 5 cut(s) 87, 121, 412, 829, 852
HpyAV CCTTC 7 cut(s) 34, 289, 295, 586, 661, 796, 811
HpyCH4III ACNGT 3 cut(s) 244, 496, 517
HpyCH4IV ACGT 5 cut(s) 66, 144, 276, 581, 768
HpyCH4V TGCA 4 cut(s) 589, 688, 697, 772
HpyF10VI GCNNNNNNNGC 2 cut(s) 363, 694
HpyF3I CTNAG 1 cut(s) 419
HpySE526I ACGT 5 cut(s) 66, 144, 276, 581, 768
Hsp92I GRCGYC 4 cut(s) 92, 144, 276, 660
Hsp92II CATG 6 cut(s) 268, 445, 676, 692, 712, 718
HspAI GCGC 3 cut(s) 181, 326, 502
KpnI GGTACC 1 cut(s) 114
KroI GCCGGC 1 cut(s) 979
KroNI GCCGGC 1 cut(s) 981
Ksp22I TGATCA 1 cut(s) 306
KspI CCGCGG 1 cut(s) 40
Kzo9I GATC 7 cut(s) 257, 306, 399, 471, 597, 633, 642
LmnI GCTCC 7 cut(s) 26, 172, 178, 604, 649, 742, 788
Lsp1109I GCAGC 4 cut(s) 353, 681, 757, 784
LweI GCATC 1 cut(s) 192
MabI ACCWGGT 1 cut(s) 699
MaeII ACGT 5 cut(s) 66, 144, 276, 581, 768
MaeIII GTNAC 1 cut(s) 277
MalI GATC 7 cut(s) 259, 308, 401, 473, 599, 635, 644
MbiI CCGCTC 2 cut(s) 206, 652
MboI GATC 7 cut(s) 257, 306, 399, 471, 597, 633, 642
MboII GAAGA 6 cut(s) 127, 436, 481, 553, 691, 847
MflI RGATCY 3 cut(s) 399, 471, 642
MhlI GDGCHC 1 cut(s) 66
MluCI AATT 1 cut(s) 919
MlyI GAGTC 4 cut(s) 126, 158, 217, 431
MmeI TCCRAC 2 cut(s) 363, 366
MroNI GCCGGC 1 cut(s) 979
MroXI GAANNNNTTC 1 cut(s) 582
MslI CAYNNNNRTG 3 cut(s) 74, 713, 719
MspA1I CMGCKG 1 cut(s) 39
MvaI CCWGG 7 cut(s) 31, 397, 602, 647, 701, 737, 823
MvnI CGCG 2 cut(s) 39, 347
MwoI GCNNNNNNNGC 2 cut(s) 363, 694
NaeI GCCGGC 1 cut(s) 981
NciI CCSGG 3 cut(s) 353, 363, 375
NcoI CCATGG 1 cut(s) 441
NdeII GATC 7 cut(s) 257, 306, 399, 471, 597, 633, 642
NgoMIV GCCGGC 1 cut(s) 979
NlaIII CATG 6 cut(s) 268, 445, 676, 692, 712, 718
NlaIV GGNNCC 6 cut(s) 22, 35, 100, 106, 112, 356
NmuCI GTSAC 1 cut(s) 277
PaeR7I CTCGAG 2 cut(s) 320, 479
PaqCI CACCTGC 1 cut(s) 610
PasI CCCWGGG 1 cut(s) 736
PcsI WCGNNNNNNNCGW 7 cut(s) 63, 89, 144, 150, 240, 756, 765
PdiI GCCGGC 1 cut(s) 981
PdmI GAANNNNTTC 1 cut(s) 582
PfeI GAWTC 2 cut(s) 529, 682
PflFI GACNNNGTC 2 cut(s) 91, 805
PfoI TCCNGGA 2 cut(s) 600, 645
PinAI ACCGGT 2 cut(s) 107, 333
PkrI GCNGC 9 cut(s) 41, 346, 368, 654, 696, 747, 774, 929, 932
PleI GAGTC 4 cut(s) 125, 157, 217, 431
PmaCI CACGTG 1 cut(s) 769
PmlI CACGTG 1 cut(s) 769
PpsI GAGTC 4 cut(s) 125, 157, 217, 431
Ppu21I YACGTR 1 cut(s) 769
PpuMI RGGWCCY 1 cut(s) 250
PsiI TTATAA 1 cut(s) 896
Psp1406I AACGTT 1 cut(s) 581
Psp5II RGGWCCY 1 cut(s) 250
Psp6I CCWGG 7 cut(s) 29, 395, 600, 645, 699, 735, 821
PspCI CACGTG 1 cut(s) 769
PspFI CCCAGC 1 cut(s) 811
PspGI CCWGG 7 cut(s) 29, 395, 600, 645, 699, 735, 821
PspN4I GGNNCC 6 cut(s) 22, 35, 100, 106, 112, 356
PspPI GGNCC 9 cut(s) 250, 313, 331, 336, 355, 371, 388, 393, 727
PspPPI RGGWCCY 1 cut(s) 250
PspXI VCTCGAGB 2 cut(s) 320, 479
PstI CTGCAG 1 cut(s) 591
PstNI CAGNNNCTG 2 cut(s) 625, 811
PsuI RGATCY 3 cut(s) 399, 471, 642
PsyI GACNNNGTC 2 cut(s) 91, 805
RsaI GTAC 4 cut(s) 112, 485, 509, 830
RsaNI GTAC 4 cut(s) 111, 484, 508, 829
RseI CAYNNNNRTG 3 cut(s) 74, 713, 719
Rsr2I CGGWCCG 1 cut(s) 388
RsrII CGGWCCG 1 cut(s) 388
SacII CCGCGG 1 cut(s) 40
SalI GTCGAC 1 cut(s) 85
SatI GCNGC 9 cut(s) 40, 345, 367, 653, 695, 746, 773, 928, 931
Sau3AI GATC 7 cut(s) 257, 306, 399, 471, 597, 633, 642
Sau96I GGNCC 9 cut(s) 250, 313, 331, 336, 355, 371, 388, 393, 727
SchI GAGTC 4 cut(s) 126, 158, 217, 431
SduI GDGCHC 1 cut(s) 66
SexAI ACCWGGT 1 cut(s) 699
SfaNI GCATC 1 cut(s) 192
SfcI CTRYAG 1 cut(s) 587
Sfr274I CTCGAG 2 cut(s) 320, 479
Sfr303I CCGCGG 1 cut(s) 40
SgrBI CCGCGG 1 cut(s) 40
SgrDI CGTCGACG 1 cut(s) 85
SinI GGWCC 7 cut(s) 250, 313, 331, 336, 388, 393, 727
SlaI CTCGAG 2 cut(s) 320, 479
SmiMI CAYNNNNRTG 3 cut(s) 74, 713, 719
SmlI CTYRAG 5 cut(s) 167, 290, 320, 431, 479
SmoI CTYRAG 5 cut(s) 167, 290, 320, 431, 479
Sse9I AATT 1 cut(s) 919
SspI AATATT 1 cut(s) 900
StyI CCWWGG 1 cut(s) 441
TaaI ACNGT 3 cut(s) 244, 496, 517
TaiI ACGT 5 cut(s) 69, 147, 279, 584, 771
TaqI TCGA 9 cut(s) 72, 86, 126, 147, 321, 480, 549, 750, 759
TasI AATT 1 cut(s) 919
TatI WGTACW 1 cut(s) 483
TauI GCSGC 5 cut(s) 42, 347, 655, 930, 933
TfiI GAWTC 2 cut(s) 529, 682
TseFI GTSAC 1 cut(s) 277
TseI GCWGC 4 cut(s) 366, 694, 745, 772
Tsp45I GTSAC 1 cut(s) 277
TspDTI ATGAA 2 cut(s) 17, 697
TspGWI ACGGA 2 cut(s) 142, 394
Tth111I GACNNNGTC 2 cut(s) 91, 805
VpaK11BI GGWCC 7 cut(s) 250, 313, 331, 336, 388, 393, 727
XagI CCTNNNNNAGG 2 cut(s) 28, 790
XhoI CTCGAG 2 cut(s) 320, 479
XmiI GTMKAC 1 cut(s) 86
XmnI GAANNNNTTC 1 cut(s) 582
ZraI GACGTC 2 cut(s) 145, 277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.