afp3 afp3 (abi five binding protein 3)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G29575 AT3G29575 AT3G29575 |
| fragaria_vesca | FvH4_5g13760 FvH4_6g46820 FvH4_6g46820 |
| malus_domestica | MD09G1067200.v1.1 MD17G1060200.v1.1 |
| prunus_persica | Prupe.5G205900_v2.0.a1 Prupe.5G205900_v2.0.a1 Prupe.5G205900_v2.0.a1 Prupe.5G205900_v2.0.a1 |
| pyrus_communis | pycom06g18020 pycom111g05650 pycom13g23090 pycom17g05990 |
| rosa_chinensis | RchiOBHm_Chr2g0165801 RchiOBHm_Chr7g0183181 |
| rosa_laevigata | RLG00000005069 RLG00000021557 |
| rosa_multiflora | Rmu_co8279591.1_g000001 Rmu_co8332333.1_g000001 Rmu_sc0001861.1_g000014 Rmu_sc0003227.1_g000009 Rmu_sc0006832.1_g000002 Rmu_sc0012318.1_g000002 Rmu_ssc0000111.1_g000018 |
| rosa_roxburghii | Rroxscaffold_2G00085490 Rroxscaffold_3G00270680 |
| rosa_rugosa | Rorug02G0517800 Rorug06G0454600 |
| rosa_samantha | Rh2AG583500 Rh2BG595600 Rh2CG221700 Rh2CG566300 Rh2DG605400 Rh7AG057000 Rh7BG056700 Rh7CG057800 Rh7DG056600 |
| rosa_wichuraiana | Rw2G048660 Rw7G004650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 552 |
| AccB1I | GGYRCC | 1 cut(s) | 552 |
| AccI | GTMKAC | 1 cut(s) | 122 |
| AciI | CCGC | 1 cut(s) | 556 |
| AclWI | GGATC | 1 cut(s) | 328 |
| AcsI | RAATTY | 2 cut(s) | 448, 617 |
| AcuI | CTGAAG | 2 cut(s) | 45, 381 |
| AfaI | GTAC | 1 cut(s) | 554 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 610 |
| AgsI | TTSAA | 2 cut(s) | 389, 426 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 309, 341 |
| AluBI | AGCT | 2 cut(s) | 287, 600 |
| AluI | AGCT | 2 cut(s) | 287, 600 |
| Alw26I | GTCTC | 1 cut(s) | 185 |
| AlwI | GGATC | 1 cut(s) | 328 |
| Ama87I | CYCGRG | 1 cut(s) | 443 |
| ApoI | RAATTY | 2 cut(s) | 448, 617 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 476, 508 |
| AseI | ATTAAT | 1 cut(s) | 534 |
| Asp718I | GGTACC | 1 cut(s) | 552 |
| AspS9I | GGNCC | 1 cut(s) | 515 |
| AsuHPI | GGTGA | 5 cut(s) | 308, 575, 583, 600, 653 |
| AvaI | CYCGRG | 1 cut(s) | 443 |
| AvaII | GGWCC | 1 cut(s) | 515 |
| BaeGI | GKGCMC | 1 cut(s) | 433 |
| BanI | GGYRCC | 1 cut(s) | 552 |
| BccI | CCATC | 3 cut(s) | 26, 506, 688 |
| BcoDI | GTCTC | 1 cut(s) | 185 |
| Bme18I | GGWCC | 1 cut(s) | 515 |
| BmeT110I | CYCGRG | 1 cut(s) | 443 |
| BmgT120I | GGNCC | 1 cut(s) | 515 |
| BmiI | GGNNCC | 2 cut(s) | 346, 554 |
| BoxI | GACNNNNGTC | 1 cut(s) | 60 |
| BpuEI | CTTGAG | 1 cut(s) | 263 |
| BsaJI | CCNNGG | 2 cut(s) | 186, 408 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 188, 218 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 610 |
| Bse118I | RCCGGY | 1 cut(s) | 610 |
| BseDI | CCNNGG | 2 cut(s) | 186, 408 |
| BseGI | GGATG | 1 cut(s) | 652 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 610 |
| BseMII | CTCAG | 2 cut(s) | 155, 452 |
| BseRI | GAGGAG | 2 cut(s) | 250, 581 |
| BseSI | GKGCMC | 1 cut(s) | 433 |
| BshNI | GGYRCC | 1 cut(s) | 552 |
| BsiHKCI | CYCGRG | 1 cut(s) | 443 |
| BsiSI | CCGG | 1 cut(s) | 611 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 610 |
| BsmAI | GTCTC | 1 cut(s) | 185 |
| BsmBI | CGTCTC | 1 cut(s) | 185 |
| BsoBI | CYCGRG | 1 cut(s) | 443 |
| Bsp1286I | GDGCHC | 1 cut(s) | 433 |
| Bsp143I | GATC | 2 cut(s) | 260, 320 |
| BspACI | CCGC | 1 cut(s) | 556 |
| BspCNI | CTCAG | 2 cut(s) | 156, 451 |
| BspLI | GGNNCC | 2 cut(s) | 346, 554 |
| BspPI | GGATC | 1 cut(s) | 328 |
| BspT107I | GGYRCC | 1 cut(s) | 552 |
| BsrFI | RCCGGY | 1 cut(s) | 610 |
| BssAI | RCCGGY | 1 cut(s) | 610 |
| BssECI | CCNNGG | 2 cut(s) | 186, 408 |
| BssMI | GATC | 2 cut(s) | 260, 320 |
| Bst6I | CTCTTC | 4 cut(s) | 195, 206, 294, 378 |
| BstC8I | GCNNGC | 2 cut(s) | 466, 630 |
| BstDEI | CTNAG | 4 cut(s) | 58, 164, 249, 438 |
| BstDSI | CCRYGG | 2 cut(s) | 186, 408 |
| BstF5I | GGATG | 1 cut(s) | 652 |
| BstKTI | GATC | 2 cut(s) | 263, 323 |
| BstMAI | GTCTC | 1 cut(s) | 185 |
| BstMBI | GATC | 2 cut(s) | 260, 320 |
| BstNSI | RCATGY | 2 cut(s) | 490, 632 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 60 |
| BstSLI | GKGCMC | 1 cut(s) | 433 |
| BstX2I | RGATCY | 1 cut(s) | 320 |
| BstYI | RGATCY | 1 cut(s) | 320 |
| BtgI | CCRYGG | 2 cut(s) | 186, 408 |
| BtgZI | GCGATG | 1 cut(s) | 525 |
| BtsCI | GGATG | 1 cut(s) | 652 |
| Cac8I | GCNNGC | 2 cut(s) | 466, 630 |
| Cfr10I | RCCGGY | 1 cut(s) | 610 |
| Cfr13I | GGNCC | 1 cut(s) | 515 |
| Csp6I | GTAC | 1 cut(s) | 553 |
| CviAII | CATG | 3 cut(s) | 487, 593, 629 |
| CviJI | RGCY | 9 cut(s) | 112, 163, 241, 248, 287, 420, 442, 468, 600 |
| CviKI_1 | RGCY | 9 cut(s) | 112, 163, 241, 248, 287, 420, 442, 468, 600 |
| CviQI | GTAC | 1 cut(s) | 553 |
| DdeI | CTNAG | 4 cut(s) | 58, 164, 249, 438 |
| DpnI | GATC | 2 cut(s) | 262, 322 |
| DpnII | GATC | 2 cut(s) | 260, 320 |
| Eam1104I | CTCTTC | 4 cut(s) | 195, 206, 294, 378 |
| EarI | CTCTTC | 4 cut(s) | 195, 206, 294, 378 |
| Eco47I | GGWCC | 1 cut(s) | 515 |
| Eco57I | CTGAAG | 2 cut(s) | 45, 381 |
| Eco88I | CYCGRG | 1 cut(s) | 443 |
| EcoRI | GAATTC | 1 cut(s) | 617 |
| Esp3I | CGTCTC | 1 cut(s) | 185 |
| FaeI | CATG | 3 cut(s) | 490, 596, 632 |
| FaiI | YATR | 6 cut(s) | 116, 282, 479, 488, 594, 630 |
| FatI | CATG | 3 cut(s) | 486, 592, 628 |
| FblI | GTMKAC | 1 cut(s) | 122 |
| FokI | GGATG | 1 cut(s) | 639 |
| HapII | CCGG | 1 cut(s) | 611 |
| Hin1II | CATG | 3 cut(s) | 490, 596, 632 |
| HincII | GTYRAC | 3 cut(s) | 91, 148, 501 |
| HindII | GTYRAC | 3 cut(s) | 91, 148, 501 |
| HindIII | AAGCTT | 2 cut(s) | 285, 598 |
| HpaII | CCGG | 1 cut(s) | 611 |
| HphI | GGTGA | 5 cut(s) | 308, 575, 583, 600, 653 |
| Hpy166II | GTNNAC | 4 cut(s) | 91, 123, 148, 501 |
| Hpy188I | TCNGA | 3 cut(s) | 25, 265, 361 |
| Hpy188III | TCNNGA | 1 cut(s) | 134 |
| Hpy8I | GTNNAC | 4 cut(s) | 91, 123, 148, 501 |
| Hpy99I | CGWCG | 1 cut(s) | 130 |
| HpyAV | CCTTC | 4 cut(s) | 211, 298, 311, 432 |
| HpyCH4IV | ACGT | 2 cut(s) | 125, 645 |
| HpyCH4V | TGCA | 2 cut(s) | 226, 650 |
| HpyF3I | CTNAG | 4 cut(s) | 58, 164, 249, 438 |
| HpySE526I | ACGT | 2 cut(s) | 125, 645 |
| Hsp92II | CATG | 3 cut(s) | 490, 596, 632 |
| KpnI | GGTACC | 1 cut(s) | 556 |
| Kzo9I | GATC | 2 cut(s) | 260, 320 |
| LpnPI | CCDG | 7 cut(s) | 144, 321, 336, 396, 492, 618, 624 |
| MaeII | ACGT | 2 cut(s) | 125, 645 |
| MaeIII | GTNAC | 2 cut(s) | 180, 641 |
| MalI | GATC | 2 cut(s) | 262, 322 |
| MboI | GATC | 2 cut(s) | 260, 320 |
| MflI | RGATCY | 1 cut(s) | 320 |
| MhlI | GDGCHC | 1 cut(s) | 433 |
| MluCI | AATT | 2 cut(s) | 448, 617 |
| MseI | TTAA | 3 cut(s) | 534, 624, 659 |
| MslI | CAYNNNNRTG | 1 cut(s) | 633 |
| MspI | CCGG | 1 cut(s) | 611 |
| NdeII | GATC | 2 cut(s) | 260, 320 |
| NlaIII | CATG | 3 cut(s) | 490, 596, 632 |
| NlaIV | GGNNCC | 2 cut(s) | 346, 554 |
| NmuCI | GTSAC | 1 cut(s) | 641 |
| NspI | RCATGY | 2 cut(s) | 490, 632 |
| PaeI | GCATGC | 1 cut(s) | 632 |
| PshAI | GACNNNNGTC | 1 cut(s) | 60 |
| PshBI | ATTAAT | 1 cut(s) | 534 |
| PspN4I | GGNNCC | 2 cut(s) | 346, 554 |
| PspPI | GGNCC | 1 cut(s) | 515 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 160, 192 |
| PsuI | RGATCY | 1 cut(s) | 320 |
| RsaI | GTAC | 1 cut(s) | 554 |
| RsaNI | GTAC | 1 cut(s) | 553 |
| RseI | CAYNNNNRTG | 1 cut(s) | 633 |
| SaqAI | TTAA | 3 cut(s) | 534, 624, 659 |
| Sau3AI | GATC | 2 cut(s) | 260, 320 |
| Sau96I | GGNCC | 1 cut(s) | 515 |
| SduI | GDGCHC | 1 cut(s) | 433 |
| SinI | GGWCC | 1 cut(s) | 515 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 633 |
| SmlI | CTYRAG | 1 cut(s) | 242 |
| SmoI | CTYRAG | 1 cut(s) | 242 |
| SphI | GCATGC | 1 cut(s) | 632 |
| Sse9I | AATT | 2 cut(s) | 448, 617 |
| SsiI | CCGC | 1 cut(s) | 556 |
| TaiI | ACGT | 2 cut(s) | 128, 648 |
| TaqI | TCGA | 1 cut(s) | 5 |
| TaqII | GACCGA | 1 cut(s) | 532 |
| TasI | AATT | 2 cut(s) | 448, 617 |
| Tru1I | TTAA | 3 cut(s) | 534, 624, 659 |
| Tru9I | TTAA | 3 cut(s) | 534, 624, 659 |
| TseFI | GTSAC | 1 cut(s) | 641 |
| Tsp45I | GTSAC | 1 cut(s) | 641 |
| TspGWI | ACGGA | 2 cut(s) | 209, 397 |
| VpaK11BI | GGWCC | 1 cut(s) | 515 |
| VspI | ATTAAT | 1 cut(s) | 534 |
| XapI | RAATTY | 2 cut(s) | 448, 617 |
| XceI | RCATGY | 2 cut(s) | 490, 632 |
| XmiI | GTMKAC | 1 cut(s) | 122 |