Ninja-family protein AFP3-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G29575 AT3G29575 AT3G29575 |
| fragaria_vesca | FvH4_5g13760 FvH4_6g46820 FvH4_6g46820 |
| malus_domestica | MD09G1067200.v1.1 MD17G1060200.v1.1 |
| prunus_persica | Prupe.5G205900_v2.0.a1 Prupe.5G205900_v2.0.a1 Prupe.5G205900_v2.0.a1 Prupe.5G205900_v2.0.a1 |
| pyrus_communis | pycom06g18020 pycom111g05650 pycom13g23090 pycom17g05990 |
| rosa_chinensis | RchiOBHm_Chr2g0165801 RchiOBHm_Chr7g0183181 |
| rosa_laevigata | RLG00000005069 RLG00000021557 |
| rosa_multiflora | Rmu_co8279591.1_g000001 Rmu_co8332333.1_g000001 Rmu_sc0001861.1_g000014 Rmu_sc0003227.1_g000009 Rmu_sc0006832.1_g000002 Rmu_sc0012318.1_g000002 Rmu_ssc0000111.1_g000018 |
| rosa_roxburghii | Rroxscaffold_2G00085490 Rroxscaffold_3G00270680 |
| rosa_rugosa | Rorug02G0517800 Rorug06G0454600 |
| rosa_samantha | Rh2AG583500 Rh2BG595600 Rh2CG221700 Rh2CG566300 Rh2DG605400 Rh7AG057000 Rh7BG056700 Rh7CG057800 Rh7DG056600 |
| rosa_wichuraiana | Rw2G048660 Rw7G004650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 580 |
| AccB1I | GGYRCC | 3 cut(s) | 328, 640, 812 |
| AccI | GTMKAC | 1 cut(s) | 860 |
| AccII | CGCG | 1 cut(s) | 269 |
| AclWI | GGATC | 1 cut(s) | 480 |
| AcoI | YGGCCR | 3 cut(s) | 3, 317, 622 |
| AcsI | RAATTY | 2 cut(s) | 487, 727 |
| AcuI | CTGAAG | 1 cut(s) | 228 |
| AfaI | GTAC | 2 cut(s) | 312, 914 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 219, 809 |
| AflIII | ACRYGT | 1 cut(s) | 302 |
| AgsI | TTSAA | 4 cut(s) | 184, 635, 740, 757 |
| AjiI | CACGTC | 1 cut(s) | 303 |
| AjnI | CCWGG | 1 cut(s) | 168 |
| AleI | CACNNNNGTG | 1 cut(s) | 278 |
| AluBI | AGCT | 8 cut(s) | 20, 43, 163, 394, 402, 463, 629, 960 |
| AluI | AGCT | 8 cut(s) | 20, 43, 163, 394, 402, 463, 629, 960 |
| Alw21I | GWGCWC | 1 cut(s) | 275 |
| Alw26I | GTCTC | 3 cut(s) | 253, 356, 588 |
| AlwI | GGATC | 1 cut(s) | 480 |
| Ama87I | CYCGRG | 2 cut(s) | 205, 601 |
| AoxI | GGCC | 4 cut(s) | 3, 317, 513, 622 |
| ApeKI | GCWGC | 7 cut(s) | 40, 223, 296, 394, 442, 463, 957 |
| ApoI | RAATTY | 2 cut(s) | 487, 727 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 94, 900 |
| AspS9I | GGNCC | 3 cut(s) | 202, 766, 875 |
| AsuC2I | CCSGG | 2 cut(s) | 37, 316 |
| AsuHPI | GGTGA | 4 cut(s) | 292, 706, 935, 1013 |
| AsuII | TTCGAA | 1 cut(s) | 458 |
| AvaI | CYCGRG | 2 cut(s) | 205, 601 |
| AvaII | GGWCC | 3 cut(s) | 202, 766, 875 |
| BaeGI | GKGCMC | 1 cut(s) | 645 |
| BalI | TGGCCA | 2 cut(s) | 5, 624 |
| BanI | GGYRCC | 3 cut(s) | 328, 640, 812 |
| BbsI | GAAGAC | 1 cut(s) | 234 |
| Bbv12I | GWGCWC | 1 cut(s) | 275 |
| BbvI | GCAGC | 7 cut(s) | 52, 210, 308, 381, 450, 454, 969 |
| BccI | CCATC | 4 cut(s) | 193, 524, 614, 866 |
| BceAI | ACGGC | 2 cut(s) | 304, 465 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 455, 489 |
| BciT130I | CCWGG | 1 cut(s) | 170 |
| BcnI | CCSGG | 2 cut(s) | 37, 316 |
| BcoDI | GTCTC | 3 cut(s) | 253, 356, 588 |
| BfmI | CTRYAG | 2 cut(s) | 395, 719 |
| BglII | AGATCT | 1 cut(s) | 76 |
| BlpI | GCTNAGC | 1 cut(s) | 164 |
| Bme1390I | CCNGG | 3 cut(s) | 37, 170, 316 |
| Bme18I | GGWCC | 3 cut(s) | 202, 766, 875 |
| BmeT110I | CYCGRG | 2 cut(s) | 205, 601 |
| BmgBI | CACGTC | 1 cut(s) | 303 |
| BmgT120I | GGNCC | 3 cut(s) | 202, 766, 875 |
| BmiI | GGNNCC | 9 cut(s) | 204, 330, 479, 598, 642, 705, 767, 768, 814 |
| BmrFI | CCNGG | 3 cut(s) | 37, 170, 316 |
| BpiI | GAAGAC | 1 cut(s) | 234 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 164 |
| Bpu14I | TTCGAA | 1 cut(s) | 458 |
| BpuEI | CTTGAG | 2 cut(s) | 215, 424 |
| BpuMI | CCSGG | 2 cut(s) | 37, 316 |
| BsaI | GGTCTC | 1 cut(s) | 588 |
| BsaJI | CCNNGG | 6 cut(s) | 169, 213, 314, 600, 807, 816 |
| BsaWI | WCCGGW | 1 cut(s) | 277 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 219, 809 |
| Bse118I | RCCGGY | 2 cut(s) | 136, 556 |
| Bse1I | ACTGG | 1 cut(s) | 56 |
| Bse3DI | GCAATG | 2 cut(s) | 50, 683 |
| BseBI | CCWGG | 1 cut(s) | 170 |
| BseDI | CCNNGG | 6 cut(s) | 169, 213, 314, 600, 807, 816 |
| BseGI | GGATG | 3 cut(s) | 204, 376, 1012 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 219, 809 |
| BseMI | GCAATG | 2 cut(s) | 50, 683 |
| BseMII | CTCAG | 4 cut(s) | 155, 581, 599, 966 |
| BseNI | ACTGG | 1 cut(s) | 56 |
| BseRI | GAGGAG | 6 cut(s) | 100, 302, 421, 463, 509, 589 |
| BseSI | GKGCMC | 1 cut(s) | 645 |
| BseX3I | CGGCCG | 1 cut(s) | 317 |
| BseXI | GCAGC | 7 cut(s) | 52, 210, 308, 381, 450, 454, 969 |
| Bsh1236I | CGCG | 1 cut(s) | 269 |
| Bsh1285I | CGRYCG | 4 cut(s) | 190, 239, 320, 434 |
| BshFI | GGCC | 4 cut(s) | 5, 319, 515, 624 |
| BshNI | GGYRCC | 3 cut(s) | 328, 640, 812 |
| BsiEI | CGRYCG | 4 cut(s) | 190, 239, 320, 434 |
| BsiHKAI | GWGCWC | 1 cut(s) | 275 |
| BsiHKCI | CYCGRG | 2 cut(s) | 205, 601 |
| BsiSI | CCGG | 7 cut(s) | 37, 99, 137, 278, 316, 557, 971 |
| BslFI | GGGAC | 2 cut(s) | 586, 752 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 219, 809 |
| BsmAI | GTCTC | 3 cut(s) | 253, 356, 588 |
| BsmFI | GGGAC | 2 cut(s) | 586, 752 |
| BsnI | GGCC | 4 cut(s) | 5, 319, 515, 624 |
| Bso31I | GGTCTC | 1 cut(s) | 588 |
| BsoBI | CYCGRG | 2 cut(s) | 205, 601 |
| Bsp119I | TTCGAA | 1 cut(s) | 458 |
| Bsp1286I | GDGCHC | 2 cut(s) | 275, 645 |
| Bsp143I | GATC | 3 cut(s) | 76, 236, 472 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 164 |
| BspANI | GGCC | 4 cut(s) | 5, 319, 515, 624 |
| BspCNI | CTCAG | 4 cut(s) | 156, 580, 598, 967 |
| BspFNI | CGCG | 1 cut(s) | 269 |
| BspLI | GGNNCC | 9 cut(s) | 204, 330, 479, 598, 642, 705, 767, 768, 814 |
| BspMAI | CTGCAG | 2 cut(s) | 399, 723 |
| BspPI | GGATC | 1 cut(s) | 480 |
| BspT104I | TTCGAA | 1 cut(s) | 458 |
| BspT107I | GGYRCC | 3 cut(s) | 328, 640, 812 |
| BspTNI | GGTCTC | 1 cut(s) | 588 |
| BsrDI | GCAATG | 2 cut(s) | 50, 683 |
| BsrFI | RCCGGY | 2 cut(s) | 136, 556 |
| BsrI | ACTGG | 1 cut(s) | 56 |
| BssAI | RCCGGY | 2 cut(s) | 136, 556 |
| BssECI | CCNNGG | 6 cut(s) | 169, 213, 314, 600, 807, 816 |
| BssMI | GATC | 3 cut(s) | 76, 236, 472 |
| BssT1I | CCWWGG | 3 cut(s) | 213, 807, 816 |
| Bst2UI | CCWGG | 1 cut(s) | 170 |
| Bst4CI | ACNGT | 2 cut(s) | 188, 736 |
| Bst6I | CTCTTC | 1 cut(s) | 377 |
| BstBI | TTCGAA | 1 cut(s) | 458 |
| BstC8I | GCNNGC | 5 cut(s) | 264, 271, 350, 558, 990 |
| BstDEI | CTNAG | 4 cut(s) | 164, 567, 585, 975 |
| BstEII | GGTNACC | 1 cut(s) | 607 |
| BstF5I | GGATG | 3 cut(s) | 204, 376, 1012 |
| BstFNI | CGCG | 1 cut(s) | 269 |
| BstKTI | GATC | 3 cut(s) | 79, 239, 475 |
| BstMAI | GTCTC | 3 cut(s) | 253, 356, 588 |
| BstMBI | GATC | 3 cut(s) | 76, 236, 472 |
| BstMCI | CGRYCG | 4 cut(s) | 190, 239, 320, 434 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 232, 553, 812 |
| BstNI | CCWGG | 1 cut(s) | 170 |
| BstNSI | RCATGY | 1 cut(s) | 992 |
| BstPI | GGTNACC | 1 cut(s) | 607 |
| BstSCI | CCNGG | 3 cut(s) | 35, 168, 314 |
| BstSFI | CTRYAG | 2 cut(s) | 395, 719 |
| BstSLI | GKGCMC | 1 cut(s) | 645 |
| BstUI | CGCG | 1 cut(s) | 269 |
| BstV1I | GCAGC | 7 cut(s) | 52, 210, 308, 381, 450, 454, 969 |
| BstV2I | GAAGAC | 1 cut(s) | 234 |
| BstX2I | RGATCY | 1 cut(s) | 76 |
| BstYI | RGATCY | 1 cut(s) | 76 |
| BstZI | CGGCCG | 1 cut(s) | 317 |
| BsuRI | GGCC | 4 cut(s) | 5, 319, 515, 624 |
| BtrI | CACGTC | 1 cut(s) | 303 |
| BtsCI | GGATG | 3 cut(s) | 204, 376, 1012 |
| BtsI | GCAGTG | 1 cut(s) | 781 |
| BtsIMutI | CAGTG | 2 cut(s) | 63, 781 |
| Cac8I | GCNNGC | 5 cut(s) | 264, 271, 350, 558, 990 |
| Cfr10I | RCCGGY | 2 cut(s) | 136, 556 |
| Cfr13I | GGNCC | 3 cut(s) | 202, 766, 875 |
| Csp6I | GTAC | 2 cut(s) | 311, 913 |
| CviAII | CATG | 2 cut(s) | 953, 989 |
| CviQI | GTAC | 2 cut(s) | 311, 913 |
| DdeI | CTNAG | 4 cut(s) | 164, 567, 585, 975 |
| DpnI | GATC | 3 cut(s) | 78, 238, 474 |
| DpnII | GATC | 3 cut(s) | 76, 236, 472 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 580 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 580 |
| EaeI | YGGCCR | 3 cut(s) | 3, 317, 622 |
| EagI | CGGCCG | 1 cut(s) | 317 |
| Eam1104I | CTCTTC | 1 cut(s) | 377 |
| EarI | CTCTTC | 1 cut(s) | 377 |
| EciI | GGCGGA | 2 cut(s) | 534, 575 |
| EclXI | CGGCCG | 1 cut(s) | 317 |
| Eco130I | CCWWGG | 3 cut(s) | 213, 807, 816 |
| Eco31I | GGTCTC | 1 cut(s) | 588 |
| Eco47I | GGWCC | 3 cut(s) | 202, 766, 875 |
| Eco52I | CGGCCG | 1 cut(s) | 317 |
| Eco57I | CTGAAG | 1 cut(s) | 228 |
| Eco88I | CYCGRG | 2 cut(s) | 205, 601 |
| Eco91I | GGTNACC | 1 cut(s) | 607 |
| EcoO109I | RGGNCCY | 1 cut(s) | 766 |
| EcoO65I | GGTNACC | 1 cut(s) | 607 |
| EcoRI | GAATTC | 1 cut(s) | 727 |
| EcoRII | CCWGG | 1 cut(s) | 168 |
| EcoT14I | CCWWGG | 3 cut(s) | 213, 807, 816 |
| ErhI | CCWWGG | 3 cut(s) | 213, 807, 816 |
| FaeI | CATG | 2 cut(s) | 956, 992 |
| FaiI | YATR | 8 cut(s) | 326, 468, 848, 943, 954, 990, 1026, 1028 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 888, 920 |
| FaqI | GGGAC | 2 cut(s) | 586, 752 |
| FatI | CATG | 2 cut(s) | 952, 988 |
| FauI | CCCGC | 1 cut(s) | 211 |
| FblI | GTMKAC | 1 cut(s) | 860 |
| FokI | GGATG | 3 cut(s) | 211, 383, 999 |
| HaeIII | GGCC | 4 cut(s) | 5, 319, 515, 624 |
| HapII | CCGG | 7 cut(s) | 37, 99, 137, 278, 316, 557, 971 |
| Hin1II | CATG | 2 cut(s) | 956, 992 |
| HincII | GTYRAC | 1 cut(s) | 130 |
| HindII | GTYRAC | 1 cut(s) | 130 |
| HinfI | GANTC | 5 cut(s) | 146, 563, 614, 680, 967 |
| HpaII | CCGG | 7 cut(s) | 37, 99, 137, 278, 316, 557, 971 |
| HphI | GGTGA | 4 cut(s) | 292, 706, 935, 1013 |
| Hpy166II | GTNNAC | 3 cut(s) | 130, 311, 861 |
| Hpy188I | TCNGA | 8 cut(s) | 151, 253, 336, 357, 436, 477, 619, 966 |
| Hpy188III | TCNNGA | 2 cut(s) | 114, 878 |
| Hpy8I | GTNNAC | 3 cut(s) | 130, 311, 861 |
| Hpy99I | CGWCG | 6 cut(s) | 107, 128, 155, 158, 304, 361 |
| HpyAV | CCTTC | 3 cut(s) | 382, 551, 890 |
| HpyCH4III | ACNGT | 2 cut(s) | 188, 736 |
| HpyCH4IV | ACGT | 2 cut(s) | 156, 302 |
| HpyCH4V | TGCA | 8 cut(s) | 142, 226, 397, 466, 651, 721, 786, 1009 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 232, 553, 812 |
| HpyF3I | CTNAG | 4 cut(s) | 164, 567, 585, 975 |
| HpySE526I | ACGT | 2 cut(s) | 156, 302 |
| Hsp92II | CATG | 2 cut(s) | 956, 992 |
| KflI | GGGWCCC | 1 cut(s) | 766 |
| KroI | GCCGGC | 1 cut(s) | 556 |
| KroNI | GCCGGC | 1 cut(s) | 558 |
| Kzo9I | GATC | 3 cut(s) | 76, 236, 472 |
| LmnI | GCTCC | 4 cut(s) | 391, 477, 602, 1048 |
| Lsp1109I | GCAGC | 7 cut(s) | 52, 210, 308, 381, 450, 454, 969 |
| MaeII | ACGT | 2 cut(s) | 156, 302 |
| MaeIII | GTNAC | 2 cut(s) | 607, 712 |
| MalI | GATC | 3 cut(s) | 78, 238, 474 |
| MboI | GATC | 3 cut(s) | 76, 236, 472 |
| MboII | GAAGA | 2 cut(s) | 234, 394 |
| MflI | RGATCY | 1 cut(s) | 76 |
| MhlI | GDGCHC | 2 cut(s) | 275, 645 |
| MlsI | TGGCCA | 2 cut(s) | 5, 624 |
| MluCI | AATT | 4 cut(s) | 64, 90, 487, 727 |
| MluNI | TGGCCA | 2 cut(s) | 5, 624 |
| MlyI | GAGTC | 3 cut(s) | 623, 689, 961 |
| MmeI | TCCRAC | 5 cut(s) | 174, 276, 380, 414, 819 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 624 |
| MreI | CGCCGGCG | 1 cut(s) | 556 |
| MroNI | GCCGGC | 1 cut(s) | 556 |
| MroXI | GAANNNNTTC | 2 cut(s) | 94, 900 |
| MscI | TGGCCA | 2 cut(s) | 5, 624 |
| MseI | TTAA | 1 cut(s) | 984 |
| MslI | CAYNNNNRTG | 2 cut(s) | 278, 993 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 624 |
| MspI | CCGG | 7 cut(s) | 37, 99, 137, 278, 316, 557, 971 |
| MspR9I | CCNGG | 3 cut(s) | 37, 170, 316 |
| MvaI | CCWGG | 1 cut(s) | 170 |
| MvnI | CGCG | 1 cut(s) | 269 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 232, 553, 812 |
| NaeI | GCCGGC | 1 cut(s) | 558 |
| NciI | CCSGG | 2 cut(s) | 37, 316 |
| NdeII | GATC | 3 cut(s) | 76, 236, 472 |
| NgoMIV | GCCGGC | 1 cut(s) | 556 |
| NlaIII | CATG | 2 cut(s) | 956, 992 |
| NlaIV | GGNNCC | 9 cut(s) | 204, 330, 479, 598, 642, 705, 767, 768, 814 |
| NmuCI | GTSAC | 1 cut(s) | 712 |
| NspI | RCATGY | 1 cut(s) | 992 |
| NspV | TTCGAA | 1 cut(s) | 458 |
| OliI | CACNNNNGTG | 1 cut(s) | 278 |
| PaeI | GCATGC | 1 cut(s) | 992 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 129, 266 |
| PdiI | GCCGGC | 1 cut(s) | 558 |
| PdmI | GAANNNNTTC | 2 cut(s) | 94, 900 |
| PfeI | GAWTC | 2 cut(s) | 146, 563 |
| Ple19I | CGATCG | 1 cut(s) | 239 |
| PleI | GAGTC | 3 cut(s) | 622, 688, 961 |
| PpsI | GAGTC | 3 cut(s) | 622, 688, 961 |
| PpuMI | RGGWCCY | 1 cut(s) | 766 |
| Psp5II | RGGWCCY | 1 cut(s) | 766 |
| Psp6I | CCWGG | 1 cut(s) | 168 |
| PspEI | GGTNACC | 1 cut(s) | 607 |
| PspGI | CCWGG | 1 cut(s) | 168 |
| PspN4I | GGNNCC | 9 cut(s) | 204, 330, 479, 598, 642, 705, 767, 768, 814 |
| PspPI | GGNCC | 3 cut(s) | 202, 766, 875 |
| PspPPI | RGGWCCY | 1 cut(s) | 766 |
| PstI | CTGCAG | 2 cut(s) | 399, 723 |
| PsuI | RGATCY | 1 cut(s) | 76 |
| PvuI | CGATCG | 1 cut(s) | 239 |
| RsaI | GTAC | 2 cut(s) | 312, 914 |
| RsaNI | GTAC | 2 cut(s) | 311, 913 |
| RseI | CAYNNNNRTG | 2 cut(s) | 278, 993 |
| SaqAI | TTAA | 1 cut(s) | 984 |
| Sau3AI | GATC | 3 cut(s) | 76, 236, 472 |
| Sau96I | GGNCC | 3 cut(s) | 202, 766, 875 |
| SchI | GAGTC | 3 cut(s) | 623, 689, 961 |
| ScrFI | CCNGG | 3 cut(s) | 37, 170, 316 |
| SduI | GDGCHC | 2 cut(s) | 275, 645 |
| SfcI | CTRYAG | 2 cut(s) | 395, 719 |
| SfuI | TTCGAA | 1 cut(s) | 458 |
| SgrAI | CRCCGGYG | 1 cut(s) | 556 |
| SinI | GGWCC | 3 cut(s) | 202, 766, 875 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 278, 993 |
| SmlI | CTYRAG | 2 cut(s) | 230, 403 |
| SmoI | CTYRAG | 2 cut(s) | 230, 403 |
| SphI | GCATGC | 1 cut(s) | 992 |
| Sse9I | AATT | 4 cut(s) | 64, 90, 487, 727 |
| SspI | AATATT | 1 cut(s) | 676 |
| StyD4I | CCNGG | 3 cut(s) | 35, 168, 314 |
| StyI | CCWWGG | 3 cut(s) | 213, 807, 816 |
| TaaI | ACNGT | 2 cut(s) | 188, 736 |
| TaiI | ACGT | 2 cut(s) | 159, 305 |
| TaqI | TCGA | 3 cut(s) | 115, 458, 492 |
| TasI | AATT | 4 cut(s) | 64, 90, 487, 727 |
| TauI | GCSGC | 3 cut(s) | 269, 528, 550 |
| TfiI | GAWTC | 2 cut(s) | 146, 563 |
| Tru1I | TTAA | 1 cut(s) | 984 |
| Tru9I | TTAA | 1 cut(s) | 984 |
| TscAI | CASTG | 2 cut(s) | 63, 788 |
| TseFI | GTSAC | 1 cut(s) | 712 |
| TseI | GCWGC | 7 cut(s) | 40, 223, 296, 394, 442, 463, 957 |
| Tsp45I | GTSAC | 1 cut(s) | 712 |
| TspDTI | ATGAA | 1 cut(s) | 740 |
| TspGWI | ACGGA | 2 cut(s) | 374, 774 |
| TspRI | CASTG | 2 cut(s) | 63, 788 |
| VpaK11BI | GGWCC | 3 cut(s) | 202, 766, 875 |
| XapI | RAATTY | 2 cut(s) | 487, 727 |
| XceI | RCATGY | 1 cut(s) | 992 |
| XmiI | GTMKAC | 1 cut(s) | 860 |
| XmnI | GAANNNNTTC | 2 cut(s) | 94, 900 |