AT3G57610

Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
21334191 .. 21336720
2530 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G57610.1

Sequence Viewer

Length: 1473 bp
ATGTCTCTCTCTTCCCTCACTCTCGACTCCAATCCAAGATTCGCTGTTGGTGGACCTTATCACCGCCGTTATCCTCCTCTTCACCACCCTCGAAGCTTCGTCTCTTGCTCTGCTAAACGTCCAGCTGTCTCCGCTTCACTGAGCGTCGCCGCTGATTCAGCCGCCACTGAGTCTCTTGGACGGATTGGATCACTGAGTCAAGTATCTGGTGTACTCGGTTGCCAATGGGGAGATGAAGGTAAAGGCAAACTCGTTGACATCTTAGCCCAACACTTTGACATCGTTGCTCGTTGTCAGGGTGGAGCTAATGCTGGACACACTATATACAATTCAGAGGGAAAGAAATTTGCACTTCACCTTGTGCCTTCAGGTATCCTGAATGAGGATACTACTTGTGTCATTGGAAACGGAGTTGTGGTGCATTTGCCAGGTCTCTTCAAAGAGATTGATGGTTTGGAGTCCAATGGTGTCTCCTGTAAAGGAAGGATTTTGGTCTCTGATCGCGCTCACTTGTTATTCGATTTCCATCAAGAGGTTGATGGGCTCAGGGAATCTGAGCTTGCCAAGTCGTTCATTGGCACCACCAAGAGGGGAATTGGTCCTGCCTACTCTAGTAAAGTGATAAGGAATGGTATTAGAGTAGGTGATCTCAGGCACATGGATACTTTACCTCAAAAGCTTGACCTTTTACTATCAGATGCAGCGGCAAGGTTTCAAGGGTTCAAGTATACTCCTGAAATGCTTCGGGAAGAAGTTGAAGCATACAAGAGATACGCTGACAGATTGGAGCCCTACATTACTGACACTGTCCATTTCATCAATGACTCGATTTCGCAGAAGAAAAAGGTTTTGGTCGAAGGTGGTCAAGCTACAATGTTGGACATTGACTTTGGGACTTATCCTTTTGTTACTTCCTCCAGCCCCTCAGCCGGTGGGATCTGCACAGGTCTTGGTATTGCACCAAGTGTTGTTGGTGATCTAATTGGAGTGGTAAAAGCATACACTACAAGAGTTGGTTCAGGTCCATTCCCGACAGAAAATTTGGGCACAGGTGGTGACCTTCTTAGGTTAGCTGGACAGGAGTTTGGCACTACAACTGGTCGTCCTCGTCGGTGTGGCTGGCTTGACATTGTTGCCCTGAAATTTTCTTGCCAAATCAATGGATTTGCATCACTTAATCTCACTAAGCTTGATGTACTTTCGGATCTGAACGAAATCCAGCTGGGTGTGGCTTACAAGAGGAGTGACGGCACCCCTGTTAAATCATTCCCTGGTGATCTTCGTCTTCTCGAAGAACTGCATGTGGAGTATGAAGTCTTACCTGGGTGGAAGTCTGACATATCCTCGGTCAGAAACTACTCTGATCTTCCAAAGGCTGCTCAGCAATATGTTGAGAGGATTGAAGAACTCGTGGGTGTGCCCATTCATTACATTGGTATTGGGCCCGGTCGTGATGCCCTTATATATAAATGA

Protein Analysis

490

Amino Acids

52.96

Weight (kDa)

6.68

Isoelectric Point (pI)

37.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adenylsucc_synt PF00709 71 - 488 8.2e-175 Adenylosuccinate synthetase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 578, 1250
AccI GTMKAC 1 cut(s) 728
AccII CGCG 1 cut(s) 504
AciI CCGC 5 cut(s) 64, 132, 150, 162, 704
AclWI GGATC 3 cut(s) 196, 944, 1212
AcsI RAATTY 3 cut(s) 344, 1039, 1142
AcuI CTGAAG 1 cut(s) 351
AdeI CACNNNGTG 2 cut(s) 361, 965
AfaI GTAC 2 cut(s) 213, 1197
AfiI CCNNNNNNNGG 4 cut(s) 382, 532, 588, 929
AgsI TTSAA 5 cut(s) 439, 716, 724, 758, 1403
AjnI CCWGG 3 cut(s) 427, 1270, 1321
AjuI GAANNNNNNNTTGG 4 cut(s) 23, 55, 833, 865
AluBI AGCT 9 cut(s) 96, 125, 305, 559, 679, 869, 1073, 1189, 1222
AluI AGCT 9 cut(s) 96, 125, 305, 559, 679, 869, 1073, 1189, 1222
Alw26I GTCTC 7 cut(s) 9, 106, 133, 177, 437, 475, 499
AlwI GGATC 3 cut(s) 196, 944, 1212
AoxI GGCC 1 cut(s) 1442
ApaI GGGCCC 1 cut(s) 1446
ApeKI GCWGC 2 cut(s) 701, 1376
ApoI RAATTY 3 cut(s) 344, 1039, 1142
ArsI GACNNNNNNTTYG 4 cut(s) 872, 904, 1024, 1056
Asp700I GAANNNNTTC 1 cut(s) 741
AspLEI GCGC 1 cut(s) 506
AspS9I GGNCC 5 cut(s) 53, 599, 1022, 1442, 1443
AsuC2I CCSGG 1 cut(s) 1446
AsuHPI GGTGA 7 cut(s) 53, 74, 347, 656, 986, 1067, 1286
AvaII GGWCC 3 cut(s) 53, 599, 1022
BaeGI GKGCMC 3 cut(s) 1049, 1422, 1446
BanI GGYRCC 2 cut(s) 578, 1250
BanII GRGCYC 3 cut(s) 546, 792, 1446
BauI CACGAG 1 cut(s) 1409
BbsI GAAGAC 1 cut(s) 1277
BbvCI CCTCAGC 1 cut(s) 925
BbvI GCAGC 2 cut(s) 713, 1363
BccI CCATC 3 cut(s) 443, 533, 534
BceAI ACGGC 2 cut(s) 51, 1264
BciT130I CCWGG 3 cut(s) 429, 1272, 1323
BciVI GTATCC 3 cut(s) 379, 383, 655
BcnI CCSGG 1 cut(s) 1446
BcoDI GTCTC 7 cut(s) 9, 106, 133, 177, 437, 475, 499
BfaI CTAG 1 cut(s) 612
BfuI GTATCC 3 cut(s) 379, 383, 655
BisI GCNGC 5 cut(s) 150, 162, 702, 705, 1377
BlpI GCTNAGC 1 cut(s) 1380
BlsI GCNGC 5 cut(s) 151, 163, 703, 706, 1378
Bme1390I CCNGG 4 cut(s) 429, 1272, 1323, 1446
Bme18I GGWCC 3 cut(s) 53, 599, 1022
BmgT120I GGNCC 5 cut(s) 53, 599, 1022, 1442, 1443
BmiI GGNNCC 4 cut(s) 580, 789, 1252, 1444
BmrFI CCNGG 4 cut(s) 429, 1272, 1323, 1446
BmsI GCATC 3 cut(s) 688, 1178, 1444
BpiI GAAGAC 1 cut(s) 1277
BpmI CTGGAG 1 cut(s) 901
Bpu10I CCTNAGC 2 cut(s) 545, 925
Bpu1102I GCTNAGC 1 cut(s) 1380
BpuMI CCSGG 1 cut(s) 1446
BsaBI GATNNNNATC 2 cut(s) 525, 1168
BsaI GGTCTC 2 cut(s) 437, 499
BsaJI CCNNGG 3 cut(s) 1270, 1322, 1344
BsaXI ACNNNNNCTCC 2 cut(s) 402, 432
Bsc4I CCNNNNNNNGG 4 cut(s) 382, 532, 588, 929
Bse118I RCCGGY 1 cut(s) 929
Bse1I ACTGG 1 cut(s) 1102
Bse8I GATNNNNATC 2 cut(s) 525, 1168
BseBI CCWGG 3 cut(s) 429, 1272, 1323
BseDI CCNNGG 3 cut(s) 1270, 1322, 1344
BseJI GATNNNNATC 2 cut(s) 525, 1168
BseLI CCNNNNNNNGG 4 cut(s) 382, 532, 588, 929
BseMII CTCAG 8 cut(s) 131, 159, 185, 546, 559, 664, 939, 1394
BseNI ACTGG 1 cut(s) 1102
BseRI GAGGAG 2 cut(s) 66, 1255
BseSI GKGCMC 3 cut(s) 1049, 1422, 1446
BseXI GCAGC 2 cut(s) 713, 1363
BseYI CCCAGC 1 cut(s) 1222
BsgI GTGCAG 1 cut(s) 925
Bsh1236I CGCG 1 cut(s) 504
Bsh1285I CGRYCG 1 cut(s) 1450
BshFI GGCC 1 cut(s) 1444
BshNI GGYRCC 2 cut(s) 578, 1250
BsiEI CGRYCG 1 cut(s) 1450
BsiSI CCGG 2 cut(s) 930, 1446
BslFI GGGAC 1 cut(s) 907
BslI CCNNNNNNNGG 4 cut(s) 382, 532, 588, 929
BsmAI GTCTC 7 cut(s) 9, 106, 133, 177, 437, 475, 499
BsmBI CGTCTC 1 cut(s) 106
BsmFI GGGAC 1 cut(s) 907
BsnI GGCC 1 cut(s) 1444
Bso31I GGTCTC 2 cut(s) 437, 499
Bsp120I GGGCCC 1 cut(s) 1442
Bsp1286I GDGCHC 5 cut(s) 546, 792, 1049, 1422, 1446
Bsp143I GATC 8 cut(s) 188, 499, 646, 936, 976, 1204, 1276, 1363
Bsp1720I GCTNAGC 1 cut(s) 1380
BspACI CCGC 5 cut(s) 64, 132, 150, 162, 704
BspANI GGCC 1 cut(s) 1444
BspCNI CTCAG 8 cut(s) 132, 160, 186, 547, 558, 663, 938, 1393
BspFNI CGCG 1 cut(s) 504
BspLI GGNNCC 4 cut(s) 580, 789, 1252, 1444
BspPI GGATC 3 cut(s) 196, 944, 1212
BspT107I GGYRCC 2 cut(s) 578, 1250
BspTNI GGTCTC 2 cut(s) 437, 499
BsrFI RCCGGY 1 cut(s) 929
BsrI ACTGG 1 cut(s) 1102
BssAI RCCGGY 1 cut(s) 929
BssECI CCNNGG 3 cut(s) 1270, 1322, 1344
BssMI GATC 8 cut(s) 188, 499, 646, 936, 976, 1204, 1276, 1363
BssNAI GTATAC 1 cut(s) 729
BssSI CACGAG 1 cut(s) 1409
Bst1107I GTATAC 1 cut(s) 729
Bst2BI CACGAG 1 cut(s) 1409
Bst2UI CCWGG 3 cut(s) 429, 1272, 1323
Bst4CI ACNGT 1 cut(s) 808
Bst6I CTCTTC 3 cut(s) 16, 84, 440
BstC8I GCNNGC 2 cut(s) 561, 1121
BstEII GGTNACC 1 cut(s) 1055
BstENI CCTNNNNNAGG 1 cut(s) 380
BstFNI CGCG 1 cut(s) 504
BstHHI GCGC 1 cut(s) 506
BstKTI GATC 8 cut(s) 191, 502, 649, 939, 979, 1207, 1279, 1366
BstMAI GTCTC 7 cut(s) 9, 106, 133, 177, 437, 475, 499
BstMBI GATC 8 cut(s) 188, 499, 646, 936, 976, 1204, 1276, 1363
BstMCI CGRYCG 1 cut(s) 1450
BstMWI GCNNNNNNNGC 2 cut(s) 131, 158
BstNI CCWGG 3 cut(s) 429, 1272, 1323
BstNSI RCATGY 1 cut(s) 1304
BstPI GGTNACC 1 cut(s) 1055
BstSCI CCNGG 4 cut(s) 427, 1270, 1321, 1444
BstSLI GKGCMC 3 cut(s) 1049, 1422, 1446
BstUI CGCG 1 cut(s) 504
BstV1I GCAGC 2 cut(s) 713, 1363
BstV2I GAAGAC 1 cut(s) 1277
BstX2I RGATCY 2 cut(s) 936, 1204
BstXI CCANNNNNNTGG 1 cut(s) 1160
BstYI RGATCY 2 cut(s) 936, 1204
BstZ17I GTATAC 1 cut(s) 729
BsuI GTATCC 3 cut(s) 379, 383, 655
BsuRI GGCC 1 cut(s) 1444
BtsIMutI CAGTG 4 cut(s) 137, 165, 191, 804
Cac8I GCNNGC 2 cut(s) 561, 1121
CfoI GCGC 1 cut(s) 506
Cfr10I RCCGGY 1 cut(s) 929
Cfr13I GGNCC 5 cut(s) 53, 599, 1022, 1442, 1443
CseI GACGC 1 cut(s) 133
Csp6I GTAC 2 cut(s) 212, 1196
CviAII CATG 2 cut(s) 658, 1301
CviQI GTAC 2 cut(s) 212, 1196
DpnI GATC 8 cut(s) 190, 501, 648, 938, 978, 1206, 1278, 1365
DpnII GATC 8 cut(s) 188, 499, 646, 936, 976, 1204, 1276, 1363
DraIII CACNNNGTG 2 cut(s) 361, 965
Eam1104I CTCTTC 3 cut(s) 16, 84, 440
EarI CTCTTC 3 cut(s) 16, 84, 440
Eco24I GRGCYC 3 cut(s) 546, 792, 1446
Eco31I GGTCTC 2 cut(s) 437, 499
Eco47I GGWCC 3 cut(s) 53, 599, 1022
Eco57I CTGAAG 1 cut(s) 351
Eco91I GGTNACC 1 cut(s) 1055
EcoNI CCTNNNNNAGG 1 cut(s) 380
EcoO65I GGTNACC 1 cut(s) 1055
EcoRII CCWGG 3 cut(s) 427, 1270, 1321
EcoT38I GRGCYC 3 cut(s) 546, 792, 1446
Esp3I CGTCTC 1 cut(s) 106
FaeI CATG 2 cut(s) 661, 1304
FaqI GGGAC 1 cut(s) 907
FatI CATG 2 cut(s) 657, 1300
FblI GTMKAC 1 cut(s) 728
Fnu4HI GCNGC 5 cut(s) 150, 162, 702, 705, 1377
FriOI GRGCYC 3 cut(s) 546, 792, 1446
Fsp4HI GCNGC 5 cut(s) 150, 162, 702, 705, 1377
FspBI CTAG 1 cut(s) 612
GlaI GCGC 1 cut(s) 505
GluI GCNGC 5 cut(s) 150, 162, 702, 705, 1377
GsaI CCCAGC 1 cut(s) 1226
GsuI CTGGAG 1 cut(s) 901
HaeIII GGCC 1 cut(s) 1444
HapII CCGG 2 cut(s) 930, 1446
HgaI GACGC 1 cut(s) 133
HhaI GCGC 1 cut(s) 506
Hin1II CATG 2 cut(s) 661, 1304
Hin6I GCGC 1 cut(s) 504
HinP1I GCGC 1 cut(s) 504
HincII GTYRAC 1 cut(s) 256
HindII GTYRAC 1 cut(s) 256
HindIII AAGCTT 3 cut(s) 94, 677, 1187
HinfI GANTC 8 cut(s) 26, 39, 155, 170, 196, 458, 551, 824
HpaII CCGG 2 cut(s) 930, 1446
HphI GGTGA 7 cut(s) 53, 74, 347, 656, 986, 1067, 1286
Hpy166II GTNNAC 4 cut(s) 53, 212, 256, 729
Hpy188I TCNGA 9 cut(s) 334, 499, 556, 697, 1204, 1209, 1336, 1352, 1363
Hpy188III TCNNGA 8 cut(s) 23, 376, 530, 734, 746, 1030, 1289, 1451
Hpy8I GTNNAC 4 cut(s) 53, 212, 256, 729
Hpy99I CGWCG 2 cut(s) 149, 1113
HpyAV CCTTC 5 cut(s) 230, 375, 477, 851, 1070
HpyCH4III ACNGT 1 cut(s) 808
HpyCH4IV ACGT 1 cut(s) 118
HpyCH4V TGCA 7 cut(s) 350, 421, 701, 942, 959, 1169, 1300
HpyF10VI GCNNNNNNNGC 2 cut(s) 131, 158
HpySE526I ACGT 1 cut(s) 118
Hsp92II CATG 2 cut(s) 661, 1304
HspAI GCGC 1 cut(s) 504
Kzo9I GATC 8 cut(s) 188, 499, 646, 936, 976, 1204, 1276, 1363
LmnI GCTCC 2 cut(s) 302, 787
Lsp1109I GCAGC 2 cut(s) 713, 1363
LweI GCATC 3 cut(s) 688, 1178, 1444
MaeI CTAG 1 cut(s) 612
MaeII ACGT 1 cut(s) 118
MaeIII GTNAC 3 cut(s) 907, 1055, 1244
MalI GATC 8 cut(s) 190, 501, 648, 938, 978, 1206, 1278, 1365
MboI GATC 8 cut(s) 188, 499, 646, 936, 976, 1204, 1276, 1363
MflI RGATCY 2 cut(s) 936, 1204
MhlI GDGCHC 5 cut(s) 546, 792, 1049, 1422, 1446
MluCI AATT 6 cut(s) 328, 344, 594, 981, 1039, 1142
MlyI GAGTC 5 cut(s) 20, 179, 205, 467, 818
MmeI TCCRAC 1 cut(s) 858
MroXI GAANNNNTTC 1 cut(s) 741
MseI TTAA 2 cut(s) 1176, 1260
MspA1I CMGCKG 4 cut(s) 125, 152, 704, 1222
MspI CCGG 2 cut(s) 930, 1446
MspR9I CCNGG 4 cut(s) 429, 1272, 1323, 1446
MvaI CCWGG 3 cut(s) 429, 1272, 1323
MvnI CGCG 1 cut(s) 504
MwoI GCNNNNNNNGC 2 cut(s) 131, 158
NciI CCSGG 1 cut(s) 1446
NdeII GATC 8 cut(s) 188, 499, 646, 936, 976, 1204, 1276, 1363
NlaIII CATG 2 cut(s) 661, 1304
NlaIV GGNNCC 4 cut(s) 580, 789, 1252, 1444
NmuCI GTSAC 2 cut(s) 1055, 1244
NspI RCATGY 1 cut(s) 1304
PdmI GAANNNNTTC 1 cut(s) 741
PfeI GAWTC 3 cut(s) 39, 155, 551
PflFI GACNNNGTC 1 cut(s) 806
PkrI GCNGC 5 cut(s) 151, 163, 703, 706, 1378
PleI GAGTC 5 cut(s) 20, 178, 204, 466, 818
PpsI GAGTC 5 cut(s) 20, 178, 204, 466, 818
Psp6I CCWGG 3 cut(s) 427, 1270, 1321
PspEI GGTNACC 1 cut(s) 1055
PspFI CCCAGC 1 cut(s) 1222
PspGI CCWGG 3 cut(s) 427, 1270, 1321
PspN4I GGNNCC 4 cut(s) 580, 789, 1252, 1444
PspOMI GGGCCC 1 cut(s) 1442
PspPI GGNCC 5 cut(s) 53, 599, 1022, 1442, 1443
PsuI RGATCY 2 cut(s) 936, 1204
PsyI GACNNNGTC 1 cut(s) 806
PvuII CAGCTG 2 cut(s) 125, 1222
RsaI GTAC 2 cut(s) 213, 1197
RsaNI GTAC 2 cut(s) 212, 1196
SaqAI TTAA 2 cut(s) 1176, 1260
SatI GCNGC 5 cut(s) 150, 162, 702, 705, 1377
Sau3AI GATC 8 cut(s) 188, 499, 646, 936, 976, 1204, 1276, 1363
Sau96I GGNCC 5 cut(s) 53, 599, 1022, 1442, 1443
SchI GAGTC 5 cut(s) 20, 179, 205, 467, 818
ScrFI CCNGG 4 cut(s) 429, 1272, 1323, 1446
SduI GDGCHC 5 cut(s) 546, 792, 1049, 1422, 1446
SfaNI GCATC 3 cut(s) 688, 1178, 1444
SinI GGWCC 3 cut(s) 53, 599, 1022
Sse9I AATT 6 cut(s) 328, 344, 594, 981, 1039, 1142
SsiI CCGC 5 cut(s) 64, 132, 150, 162, 704
SspMI CTAG 1 cut(s) 612
StyD4I CCNGG 4 cut(s) 427, 1270, 1321, 1444
TaaI ACNGT 1 cut(s) 808
TaiI ACGT 1 cut(s) 121
TaqI TCGA 6 cut(s) 24, 91, 519, 827, 855, 1290
TaqII GACCGA 1 cut(s) 1336
TasI AATT 6 cut(s) 328, 344, 594, 981, 1039, 1142
TatI WGTACW 2 cut(s) 211, 1195
TauI GCSGC 3 cut(s) 152, 164, 707
TfiI GAWTC 3 cut(s) 39, 155, 551
Tru1I TTAA 2 cut(s) 1176, 1260
Tru9I TTAA 2 cut(s) 1176, 1260
TscAI CASTG 4 cut(s) 144, 172, 198, 811
TseFI GTSAC 2 cut(s) 1055, 1244
TseI GCWGC 2 cut(s) 701, 1376
Tsp45I GTSAC 2 cut(s) 1055, 1244
TspDTI ATGAA 5 cut(s) 249, 562, 805, 1326, 1415
TspGWI ACGGA 2 cut(s) 196, 423
TspRI CASTG 4 cut(s) 144, 172, 198, 811
Tth111I GACNNNGTC 1 cut(s) 806
VpaK11BI GGWCC 3 cut(s) 53, 599, 1022
XagI CCTNNNNNAGG 1 cut(s) 380
XapI RAATTY 3 cut(s) 344, 1039, 1142
XceI RCATGY 1 cut(s) 1304
XmiI GTMKAC 1 cut(s) 728
XmnI GAANNNNTTC 1 cut(s) 741
XspI CTAG 1 cut(s) 612
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.