Rh7AG003500

Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
273322 .. 278456
5135 bp
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UTR
Exon/CDS
Intron
Rh7AG003500.1

Sequence Viewer

Length: 1374 bp
ATGAACAACCTCTCAGCCTTTGCAGCCCTTGATGCCAACCCACTCTCCAAAACATGCTATTTGGGCACCCACCACAACAGGTTTAATCTCCTCCAGCGCCCCAGAAATGTTGTTGTATGCTCAGTGAAGCCCTCAGTTGCCTCCCCCTCATTGCTAAGTGTGGCTGGGTCCCCCAACAGTGGGCCTAATCGAATTGAGTCTCTAACCCAGGTCTCAGGAGTTTTGGGGTGCCAGTGGGGTGATGAAGGTAAAGGCAAACTCGTTGACATCTTGGCCGAGCACTTTGACATTGTTGCTCGTTGTCAGGGAGGAGCTAATGCTGGACACACCATTTACAATGCAGAAGGAAAGAAGTTTGCACTTCACCTTGTTCCCTCAGGTATTCTCAATGAGGATACTCTCTGTGTTATAGGGAATGGTGTTGTGGTGCATCTTCCGGGCCTCTTTAAAGAGATTGATGGCCTTGAATCTAATGGAGTGTCTTGCGAGGGAAGGATATTGGTCTCTGATCGTGCTCACCTCTTATTTGATTTCCACCAAGCAGTGGATGGGCTTCGAGAATCCGAGCTTGCTAAATCTTTCATTGGTACTACCAAGAGAGGCATTGGACCTTGTTACTCTAGCAAGGTTATCCGGAATGGCATTCGAGTTGGTGACTTAAGGCACATGGATACTTTACCTCAGAAGCTAGATCTTCTGTTGTCAGATGCTGCATCAAGATTCAAAGGTTTTGAGTATGGCCCCCAGATGCTTAGAGAAGAAGTAGAAAAGTACAAGAGATTTGCTGAGAGATTGGAACCCTTCATTGCTGATACTGTACTTGTTGTGAATGAAGCCATCTCTGAGAAGAAAAAGATTTTAGTTGAAGGGGGTCAGGCAACAATGTTGGATATTGACTTTGGAACGTACCCCTTTGTCACTTCCTCAAGTCCTTCAGCTGGTGGGATTTGTACCGGTCTTGGCATTGCTCCCAGAGTTTTAGGTGATCTCGTTGGAGTGGTGAAAGCATACACTACAAGAGTTGGTTCTGGTCCTTTCCCCACAGAAAACTTAGGTAAAGAGGGTGACCTTCTTAGGTTGCAAGGTCAGGAGTTTGGCACAACTACGGGTCGCCCTCGTCGCTGTGGTTGGCTTGATATAGTAGCACTGAAATACTGCTGCCAGATTAATGGCTTTTCTTCTCTCAATCTCACCAAACTAGATGTTTTGTCTGATTTTCCCGCAATTCAGTTGGGTGTTGCCTACAAAACTAGTGACGGCACACCAATCAAATCATTCCCTGGAGATCTTCGCCGTCTTGAGCAAGTGAAGGCAAGTTTTCTTCTCCCTTATTTTTGGGATTTATTGTTTCTCTTGTTACTCAATTTCAGTTAG

Protein Analysis

457

Amino Acids

49.56

Weight (kDa)

7.54

Isoelectric Point (pI)

29.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adenylsucc_synt PF00709 74 - 439 1.4e-152 Adenylosuccinate synthetase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 65, 228
AccB7I CCANNNNNTGG 1 cut(s) 544
AccIII TCCGGA 1 cut(s) 633
AciI CCGC 1 cut(s) 1221
AcoI YGGCCR 1 cut(s) 273
AcuI CTGAAG 1 cut(s) 918
AfaI GTAC 5 cut(s) 589, 773, 819, 908, 952
AfiI CCNNNNNNNGG 4 cut(s) 179, 180, 544, 938
AflII CTTAAG 1 cut(s) 658
AgeI ACCGGT 1 cut(s) 953
AgsI TTSAA 3 cut(s) 467, 724, 866
AhlI ACTAGT 1 cut(s) 1250
AjnI CCWGG 2 cut(s) 207, 1279
AluBI AGCT 4 cut(s) 314, 568, 688, 938
AluI AGCT 4 cut(s) 314, 568, 688, 938
Alw21I GWGCWC 2 cut(s) 282, 517
Alw26I GTCTC 3 cut(s) 204, 217, 508
AlwNI CAGNNNCTG 1 cut(s) 710
Aor13HI TCCGGA 1 cut(s) 633
AoxI GGCC 5 cut(s) 182, 273, 439, 460, 739
ApeKI GCWGC 3 cut(s) 23, 710, 1158
AseI ATTAAT 1 cut(s) 1167
AsiGI ACCGGT 1 cut(s) 953
AspLEI GCGC 1 cut(s) 99
AspS9I GGNCC 6 cut(s) 168, 182, 439, 608, 740, 1031
AsuC2I CCSGG 1 cut(s) 438
AsuHPI GGTGA 8 cut(s) 251, 356, 509, 665, 995, 1012, 1076, 1183
AvaII GGWCC 3 cut(s) 168, 608, 1031
AxyI CCTNAGG 1 cut(s) 376
BaeGI GKGCMC 1 cut(s) 68
BanI GGYRCC 2 cut(s) 65, 228
Bbv12I GWGCWC 2 cut(s) 282, 517
BbvI GCAGC 3 cut(s) 35, 697, 1145
BccI CCATC 3 cut(s) 452, 542, 845
BceAI ACGGC 2 cut(s) 1273, 1278
BciT130I CCWGG 2 cut(s) 209, 1281
BciVI GTATCC 2 cut(s) 388, 664
BcnI CCSGG 1 cut(s) 438
BcoDI GTCTC 3 cut(s) 204, 217, 508
BcuI ACTAGT 1 cut(s) 1250
BfaI CTAG 4 cut(s) 621, 689, 1199, 1251
BfoI RGCGCY 1 cut(s) 100
BfrI CTTAAG 1 cut(s) 658
BfuI GTATCC 2 cut(s) 388, 664
BglII AGATCT 2 cut(s) 691, 1285
BisI GCNGC 3 cut(s) 24, 711, 1159
BlsI GCNGC 3 cut(s) 25, 712, 1160
Bme1390I CCNGG 3 cut(s) 209, 438, 1281
Bme18I GGWCC 3 cut(s) 168, 608, 1031
BmgT120I GGNCC 6 cut(s) 168, 182, 439, 608, 740, 1031
BmiI GGNNCC 6 cut(s) 67, 169, 170, 230, 742, 798
BmrFI CCNGG 3 cut(s) 209, 438, 1281
BmsI GCATC 5 cut(s) 22, 439, 697, 722, 738
BpmI CTGGAG 2 cut(s) 77, 1302
BpuEI CTTGAG 2 cut(s) 910, 1319
BpuMI CCSGG 1 cut(s) 438
BsaI GGTCTC 2 cut(s) 217, 508
BsaJI CCNNGG 2 cut(s) 207, 1279
BsaWI WCCGGW 2 cut(s) 633, 953
BsaXI ACNNNNNCTCC 2 cut(s) 29, 59
Bsc4I CCNNNNNNNGG 4 cut(s) 179, 180, 544, 938
Bse118I RCCGGY 1 cut(s) 953
Bse1I ACTGG 1 cut(s) 232
Bse21I CCTNAGG 1 cut(s) 376
Bse3DI GCAATG 3 cut(s) 149, 804, 963
BseAI TCCGGA 1 cut(s) 633
BseBI CCWGG 2 cut(s) 209, 1281
BseDI CCNNGG 2 cut(s) 207, 1279
BseGI GGATG 1 cut(s) 553
BseLI CCNNNNNNNGG 4 cut(s) 179, 180, 544, 938
BseMI GCAATG 3 cut(s) 149, 804, 963
BseMII CTCAG 8 cut(s) 27, 135, 147, 228, 390, 695, 777, 834
BseNI ACTGG 1 cut(s) 232
BseRI GAGGAG 2 cut(s) 80, 324
BseSI GKGCMC 1 cut(s) 68
BseXI GCAGC 3 cut(s) 35, 697, 1145
BseYI CCCAGC 1 cut(s) 164
BshFI GGCC 5 cut(s) 184, 275, 441, 462, 741
BshNI GGYRCC 2 cut(s) 65, 228
BshTI ACCGGT 1 cut(s) 953
BsiHKAI GWGCWC 2 cut(s) 282, 517
BsiSI CCGG 3 cut(s) 437, 634, 954
BslFI GGGAC 1 cut(s) 154
BslI CCNNNNNNNGG 4 cut(s) 179, 180, 544, 938
BsmAI GTCTC 3 cut(s) 204, 217, 508
BsmFI GGGAC 1 cut(s) 154
BsmI GAATGC 1 cut(s) 642
BsnI GGCC 5 cut(s) 184, 275, 441, 462, 741
Bso31I GGTCTC 2 cut(s) 217, 508
Bsp1286I GDGCHC 3 cut(s) 68, 282, 517
Bsp13I TCCGGA 1 cut(s) 633
Bsp143I GATC 4 cut(s) 508, 691, 985, 1285
BspACI CCGC 1 cut(s) 1221
BspANI GGCC 5 cut(s) 184, 275, 441, 462, 741
BspCNI CTCAG 8 cut(s) 26, 134, 146, 227, 389, 694, 778, 835
BspEI TCCGGA 1 cut(s) 633
BspLI GGNNCC 6 cut(s) 67, 169, 170, 230, 742, 798
BspT107I GGYRCC 2 cut(s) 65, 228
BspTI CTTAAG 1 cut(s) 658
BspTNI GGTCTC 2 cut(s) 217, 508
BsrDI GCAATG 3 cut(s) 149, 804, 963
BsrFI RCCGGY 1 cut(s) 953
BsrI ACTGG 1 cut(s) 232
BssAI RCCGGY 1 cut(s) 953
BssECI CCNNGG 2 cut(s) 207, 1279
BssMI GATC 4 cut(s) 508, 691, 985, 1285
Bst2UI CCWGG 2 cut(s) 209, 1281
Bst4CI ACNGT 2 cut(s) 179, 817
BstAFI CTTAAG 1 cut(s) 658
BstC8I GCNNGC 1 cut(s) 570
BstEII GGTNACC 1 cut(s) 1064
BstF5I GGATG 1 cut(s) 553
BstH2I RGCGCY 1 cut(s) 100
BstHHI GCGC 1 cut(s) 99
BstKTI GATC 4 cut(s) 511, 694, 988, 1288
BstMAI GTCTC 3 cut(s) 204, 217, 508
BstMBI GATC 4 cut(s) 508, 691, 985, 1285
BstMWI GCNNNNNNNGC 4 cut(s) 23, 32, 63, 1119
BstNI CCWGG 2 cut(s) 209, 1281
BstNSI RCATGY 1 cut(s) 57
BstPI GGTNACC 1 cut(s) 1064
BstSCI CCNGG 3 cut(s) 207, 436, 1279
BstSLI GKGCMC 1 cut(s) 68
BstV1I GCAGC 3 cut(s) 35, 697, 1145
BstX2I RGATCY 2 cut(s) 691, 1285
BstXI CCANNNNNNTGG 1 cut(s) 1169
BstYI RGATCY 2 cut(s) 691, 1285
Bsu36I CCTNAGG 1 cut(s) 376
BsuI GTATCC 2 cut(s) 388, 664
BsuRI GGCC 5 cut(s) 184, 275, 441, 462, 741
BtsCI GGATG 1 cut(s) 553
BtsI GCAGTG 1 cut(s) 549
BtsIMutI CAGTG 5 cut(s) 129, 184, 239, 549, 1145
Cac8I GCNNGC 1 cut(s) 570
CaiI CAGNNNCTG 1 cut(s) 710
CfoI GCGC 1 cut(s) 99
Cfr10I RCCGGY 1 cut(s) 953
Cfr13I GGNCC 6 cut(s) 168, 182, 439, 608, 740, 1031
Csp6I GTAC 5 cut(s) 588, 772, 818, 907, 951
CspAI ACCGGT 1 cut(s) 953
CviAII CATG 2 cut(s) 54, 667
CviQI GTAC 5 cut(s) 588, 772, 818, 907, 951
DpnI GATC 4 cut(s) 510, 693, 987, 1287
DpnII GATC 4 cut(s) 508, 691, 985, 1285
DraI TTTAAA 1 cut(s) 448
EaeI YGGCCR 1 cut(s) 273
Eco31I GGTCTC 2 cut(s) 217, 508
Eco47I GGWCC 3 cut(s) 168, 608, 1031
Eco57I CTGAAG 1 cut(s) 918
Eco81I CCTNAGG 1 cut(s) 376
Eco91I GGTNACC 1 cut(s) 1064
EcoO109I RGGNCCY 1 cut(s) 168
EcoO65I GGTNACC 1 cut(s) 1064
EcoRII CCWGG 2 cut(s) 207, 1279
FaeI CATG 2 cut(s) 57, 670
FaiI YATR 7 cut(s) 55, 118, 410, 668, 738, 1009, 1139
FaqI GGGAC 1 cut(s) 154
FatI CATG 2 cut(s) 53, 666
FauI CCCGC 1 cut(s) 1228
Fnu4HI GCNGC 3 cut(s) 24, 711, 1159
FokI GGATG 1 cut(s) 560
Fsp4HI GCNGC 3 cut(s) 24, 711, 1159
FspBI CTAG 4 cut(s) 621, 689, 1199, 1251
GlaI GCGC 1 cut(s) 98
GluI GCNGC 3 cut(s) 24, 711, 1159
GsaI CCCAGC 1 cut(s) 168
GsuI CTGGAG 2 cut(s) 77, 1302
HaeII RGCGCY 1 cut(s) 100
HaeIII GGCC 5 cut(s) 184, 275, 441, 462, 741
HapII CCGG 3 cut(s) 437, 634, 954
HhaI GCGC 1 cut(s) 99
Hin1II CATG 2 cut(s) 57, 670
Hin6I GCGC 1 cut(s) 97
HinP1I GCGC 1 cut(s) 97
HincII GTYRAC 1 cut(s) 265
HindII GTYRAC 1 cut(s) 265
HinfI GANTC 4 cut(s) 197, 467, 560, 720
HpaII CCGG 3 cut(s) 437, 634, 954
HphI GGTGA 8 cut(s) 251, 356, 509, 665, 995, 1012, 1076, 1183
Hpy166II GTNNAC 1 cut(s) 265
Hpy188I TCNGA 6 cut(s) 508, 565, 684, 706, 844, 1213
Hpy188III TCNNGA 6 cut(s) 216, 557, 634, 717, 1088, 1298
Hpy8I GTNNAC 1 cut(s) 265
Hpy99I CGWCG 1 cut(s) 1122
HpyAV CCTTC 8 cut(s) 239, 338, 486, 811, 860, 942, 1079, 1303
HpyCH4III ACNGT 2 cut(s) 179, 817
HpyCH4IV ACGT 1 cut(s) 905
HpyCH4V TGCA 6 cut(s) 23, 341, 359, 430, 713, 1081
HpyF10VI GCNNNNNNNGC 4 cut(s) 23, 32, 63, 1119
HpySE526I ACGT 1 cut(s) 905
Hsp92II CATG 2 cut(s) 57, 670
HspAI GCGC 1 cut(s) 97
KflI GGGWCCC 1 cut(s) 168
Kpn2I TCCGGA 1 cut(s) 633
Kzo9I GATC 4 cut(s) 508, 691, 985, 1285
LmnI GCTCC 2 cut(s) 311, 973
Lsp1109I GCAGC 3 cut(s) 35, 697, 1145
LweI GCATC 5 cut(s) 22, 439, 697, 722, 738
MaeI CTAG 4 cut(s) 621, 689, 1199, 1251
MaeII ACGT 1 cut(s) 905
MaeIII GTNAC 6 cut(s) 614, 653, 916, 1064, 1253, 1356
MalI GATC 4 cut(s) 510, 693, 987, 1287
MboI GATC 4 cut(s) 508, 691, 985, 1285
MboII GAAGA 7 cut(s) 425, 686, 770, 859, 1170, 1280, 1313
MflI RGATCY 2 cut(s) 691, 1285
MhlI GDGCHC 3 cut(s) 68, 282, 517
MluCI AATT 3 cut(s) 192, 1224, 1363
MlyI GAGTC 1 cut(s) 206
MmeI TCCRAC 2 cut(s) 867, 973
MroI TCCGGA 1 cut(s) 633
MseI TTAA 4 cut(s) 84, 447, 659, 1167
MspA1I CMGCKG 1 cut(s) 938
MspCI CTTAAG 1 cut(s) 658
MspI CCGG 3 cut(s) 437, 634, 954
MspR9I CCNGG 3 cut(s) 209, 438, 1281
Mva1269I GAATGC 1 cut(s) 642
MvaI CCWGG 2 cut(s) 209, 1281
MwoI GCNNNNNNNGC 4 cut(s) 23, 32, 63, 1119
NciI CCSGG 1 cut(s) 438
NdeII GATC 4 cut(s) 508, 691, 985, 1285
NlaIII CATG 2 cut(s) 57, 670
NlaIV GGNNCC 6 cut(s) 67, 169, 170, 230, 742, 798
NmeAIII GCCGAG 1 cut(s) 301
NmuCI GTSAC 4 cut(s) 653, 916, 1064, 1253
NspI RCATGY 1 cut(s) 57
PctI GAATGC 1 cut(s) 642
PfeI GAWTC 3 cut(s) 467, 560, 720
PflMI CCANNNNNTGG 1 cut(s) 544
PinAI ACCGGT 1 cut(s) 953
PkrI GCNGC 3 cut(s) 25, 712, 1160
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
PpuMI RGGWCCY 1 cut(s) 168
PshBI ATTAAT 1 cut(s) 1167
Psp5II RGGWCCY 1 cut(s) 168
Psp6I CCWGG 2 cut(s) 207, 1279
PspEI GGTNACC 1 cut(s) 1064
PspFI CCCAGC 1 cut(s) 164
PspGI CCWGG 2 cut(s) 207, 1279
PspN4I GGNNCC 6 cut(s) 67, 169, 170, 230, 742, 798
PspPI GGNCC 6 cut(s) 168, 182, 439, 608, 740, 1031
PspPPI RGGWCCY 1 cut(s) 168
PstNI CAGNNNCTG 1 cut(s) 710
PsuI RGATCY 2 cut(s) 691, 1285
PvuII CAGCTG 1 cut(s) 938
RsaI GTAC 5 cut(s) 589, 773, 819, 908, 952
RsaNI GTAC 5 cut(s) 588, 772, 818, 907, 951
SaqAI TTAA 4 cut(s) 84, 447, 659, 1167
SatI GCNGC 3 cut(s) 24, 711, 1159
Sau3AI GATC 4 cut(s) 508, 691, 985, 1285
Sau96I GGNCC 6 cut(s) 168, 182, 439, 608, 740, 1031
SchI GAGTC 1 cut(s) 206
ScrFI CCNGG 3 cut(s) 209, 438, 1281
SduI GDGCHC 3 cut(s) 68, 282, 517
SfaNI GCATC 5 cut(s) 22, 439, 697, 722, 738
SinI GGWCC 3 cut(s) 168, 608, 1031
SmlI CTYRAG 3 cut(s) 658, 925, 1298
SmoI CTYRAG 3 cut(s) 658, 925, 1298
SpeI ACTAGT 1 cut(s) 1250
Sse9I AATT 3 cut(s) 192, 1224, 1363
SsiI CCGC 1 cut(s) 1221
SspMI CTAG 4 cut(s) 621, 689, 1199, 1251
StyD4I CCNGG 3 cut(s) 207, 436, 1279
TaaI ACNGT 2 cut(s) 179, 817
TaiI ACGT 1 cut(s) 908
TaqI TCGA 3 cut(s) 190, 556, 646
TasI AATT 3 cut(s) 192, 1224, 1363
TatI WGTACW 2 cut(s) 771, 817
TfiI GAWTC 3 cut(s) 467, 560, 720
Tru1I TTAA 4 cut(s) 84, 447, 659, 1167
Tru9I TTAA 4 cut(s) 84, 447, 659, 1167
TscAI CASTG 5 cut(s) 129, 184, 239, 549, 1152
TseFI GTSAC 4 cut(s) 653, 916, 1064, 1253
TseI GCWGC 3 cut(s) 23, 710, 1158
Tsp45I GTSAC 4 cut(s) 653, 916, 1064, 1253
TspDTI ATGAA 5 cut(s) 17, 258, 571, 793, 846
TspRI CASTG 5 cut(s) 129, 184, 239, 549, 1152
Van91I CCANNNNNTGG 1 cut(s) 544
Vha464I CTTAAG 1 cut(s) 658
VpaK11BI GGWCC 3 cut(s) 168, 608, 1031
VspI ATTAAT 1 cut(s) 1167
XceI RCATGY 1 cut(s) 57
XcmI CCANNNNNNNNNTGG 1 cut(s) 545
XspI CTAG 4 cut(s) 621, 689, 1199, 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.