pycom10g09910

Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
13073224 .. 13074901
1678 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g09910.2

Sequence Viewer

Length: 1248 bp
ATGAAGGTAAAGGAAAACTTGTCGACATCTTGGCCCAGCACTTTGACATCGTTGCTCGTTGTCAGGGTGGAGCTAATGCTGGACACACCATTTACAATGCAGAGGGAAAGAAGTTTGCACTTCACCTTGTTCCGTCGGGTATTCTTAATGAAGAAACTCTTTGTGTTATTGGGAACGGAGTTGTGGTGCATCTTCCAGGGCTCTTTAAAGAGATTGATGGCCTTCAATCTAATGGAGTCTCCTGCAAGGGAAGGATATTGGTCTCTATTGATCGATCGTGCTCACCTGTTATTTGATTTTCACCAAGTAGTGGATGGACTTCGAGAATCTGAGCTTGCTAAATCTTTCATTGGCACTACCAAGAGAGGTATTGGACCTTGTTACTCTAACAAGGTTATCCGAAATGGAATTCGAGTGAGTGACTTGAGGCACATGGATACTTTTCCTCAGAAGCTAGATCTTCTATTATCAGATGTTGCATCAAGATTCCGAGGTTTTGAGTATGGCCCCCATGTGCTCAAAGAAGAGGTTGAAAAGTACAAGAGATTTGCTGAGAGATTGGAACCCTTCATTGCTGATACTGTGCTTGTTGTGAATGAAGCCATCTCTGAGAAGAAAAAGATTTTGGTCGAAGGGGGTCAAGCAACAATGTTGGATATTGACTTTGGAACTTACCCCTTTGTAACATCCTCTAGCCCGTCAGCCGGTGGGATTTGCACTGGTCTCGGAATTGCTCCCAGAGTTTTAGGTGATCTGGTTGGAGTGGTGAAAGCGTACACTACAAGAGTTGGTTCTGGTCCTTTTCCCACAGAAATCTTGGGTCACGGGGGTGACCTCCTTAGGTTTGCTGGTCAGGAGTTTGGCACAACTACTGGCCGCCCTCGTCGTTGTGGTTGGCTTGATATAGCAGCACTGAAGTATTGCTGTCAGATTAATGGCTTTTCTTCTCTCAATCTCACCAAACTTGATGTTTTGTCTGATCTTCCCGAAATTCAGTTGGGTGTTGCCTACAAACAGATTGATGGTACCCAGATCAAATCGTTCCCTGCAGACCTTCGTGATCTTGAGCAACTAAAGGTGGAATACGAAGTATTGCCTGGATGGAAGACGGATATTTCTTCTGTCAGAAACTACTCTGACCTTCCAAAGGCTGCACGTCAGTACGTGGAAAGGATAGAAGAACTGGTTGGTGTACCTGTCCATTACATTGGCGTCGGGCCTGGGCGTGATGCACTCATTTACAAATAA

Protein Analysis

416

Amino Acids

46.58

Weight (kDa)

8.58

Isoelectric Point (pI)

35.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1025
AccB1I GGYRCC 1 cut(s) 1025
AccB7I CCANNNNNTGG 1 cut(s) 310
AccI GTMKAC 1 cut(s) 23
AciI CCGC 1 cut(s) 877
AcoI YGGCCR 1 cut(s) 874
AcsI RAATTY 2 cut(s) 408, 990
AcuI CTGAAG 1 cut(s) 935
AcyI GRCGYC 1 cut(s) 1212
AfaI GTAC 5 cut(s) 539, 776, 1027, 1163, 1194
AfiI CCNNNNNNNGG 3 cut(s) 310, 704, 1147
AgsI TTSAA 2 cut(s) 226, 533
AjiI CACGTC 1 cut(s) 1157
AjnI CCWGG 3 cut(s) 195, 1096, 1219
AjuI GAANNNNNNNTTGG 4 cut(s) 608, 640, 1170, 1202
AleI CACNNNNGTG 1 cut(s) 828
AluBI AGCT 3 cut(s) 73, 334, 454
AluI AGCT 3 cut(s) 73, 334, 454
Alw21I GWGCWC 2 cut(s) 283, 519
Alw26I GTCTC 3 cut(s) 243, 267, 728
AoxI GGCC 5 cut(s) 32, 219, 505, 874, 1217
ApeKI GCWGC 2 cut(s) 908, 1151
ApoI RAATTY 2 cut(s) 408, 990
AseI ATTAAT 1 cut(s) 933
Asp718I GGTACC 1 cut(s) 1025
AspS9I GGNCC 5 cut(s) 33, 374, 506, 797, 1217
AsuHPI GGTGA 7 cut(s) 115, 275, 293, 761, 778, 842, 949
AvaII GGWCC 2 cut(s) 374, 797
AxyI CCTNAGG 1 cut(s) 839
BanI GGYRCC 1 cut(s) 1025
BanII GRGCYC 1 cut(s) 203
BbsI GAAGAC 1 cut(s) 1112
Bbv12I GWGCWC 2 cut(s) 283, 519
BbvI GCAGC 2 cut(s) 920, 1138
BccI CCATC 5 cut(s) 211, 308, 611, 1016, 1095
BcgI CGANNNNNNTGC 2 cut(s) 706, 740
BciT130I CCWGG 3 cut(s) 197, 1098, 1221
BciVI GTATCC 1 cut(s) 430
BcoDI GTCTC 3 cut(s) 243, 267, 728
BfaI CTAG 2 cut(s) 455, 693
BfmI CTRYAG 1 cut(s) 1047
BfuI GTATCC 1 cut(s) 430
BglII AGATCT 1 cut(s) 457
BisI GCNGC 3 cut(s) 877, 909, 1152
BlsI GCNGC 3 cut(s) 878, 910, 1153
Bme1390I CCNGG 3 cut(s) 197, 1098, 1221
Bme18I GGWCC 2 cut(s) 374, 797
BmgBI CACGTC 1 cut(s) 1157
BmgT120I GGNCC 5 cut(s) 33, 374, 506, 797, 1217
BmiI GGNNCC 3 cut(s) 508, 564, 1027
BmrFI CCNGG 3 cut(s) 197, 1098, 1221
BmsI GCATC 3 cut(s) 198, 488, 1219
BpiI GAAGAC 1 cut(s) 1112
BpuEI CTTGAG 2 cut(s) 445, 1085
Bsa29I ATCGAT 1 cut(s) 273
BsaAI YACGTR 1 cut(s) 1165
BsaHI GRCGYC 1 cut(s) 1212
BsaI GGTCTC 2 cut(s) 267, 728
BsaJI CCNNGG 3 cut(s) 196, 490, 1220
BsaXI ACNNNNNCTCC 2 cut(s) 170, 200
Bsc4I CCNNNNNNNGG 3 cut(s) 310, 704, 1147
Bse118I RCCGGY 1 cut(s) 704
Bse1I ACTGG 3 cut(s) 724, 877, 1188
Bse21I CCTNAGG 1 cut(s) 839
Bse3DI GCAATG 1 cut(s) 570
BseBI CCWGG 3 cut(s) 197, 1098, 1221
BseCI ATCGAT 1 cut(s) 273
BseDI CCNNGG 3 cut(s) 196, 490, 1220
BseGI GGATG 3 cut(s) 319, 686, 1106
BseLI CCNNNNNNNGG 3 cut(s) 310, 704, 1147
BseMI GCAATG 1 cut(s) 570
BseMII CTCAG 4 cut(s) 321, 461, 543, 600
BseNI ACTGG 3 cut(s) 724, 877, 1188
BseXI GCAGC 2 cut(s) 920, 1138
BseYI CCCAGC 1 cut(s) 35
BsgI GTGCAG 1 cut(s) 1137
Bsh1285I CGRYCG 1 cut(s) 277
BshFI GGCC 5 cut(s) 34, 221, 507, 876, 1219
BshNI GGYRCC 1 cut(s) 1025
BshVI ATCGAT 1 cut(s) 273
BsiEI CGRYCG 1 cut(s) 277
BsiHKAI GWGCWC 2 cut(s) 283, 519
BsiSI CCGG 1 cut(s) 705
BslI CCNNNNNNNGG 3 cut(s) 310, 704, 1147
BsmAI GTCTC 3 cut(s) 243, 267, 728
BsnI GGCC 5 cut(s) 34, 221, 507, 876, 1219
Bso31I GGTCTC 2 cut(s) 267, 728
Bsp1286I GDGCHC 3 cut(s) 203, 283, 519
Bsp143I GATC 7 cut(s) 270, 274, 457, 751, 979, 1032, 1060
BspACI CCGC 1 cut(s) 877
BspANI GGCC 5 cut(s) 34, 221, 507, 876, 1219
BspCNI CTCAG 4 cut(s) 322, 460, 544, 601
BspDI ATCGAT 1 cut(s) 273
BspLI GGNNCC 3 cut(s) 508, 564, 1027
BspMAI CTGCAG 1 cut(s) 1051
BspT107I GGYRCC 1 cut(s) 1025
BspTNI GGTCTC 2 cut(s) 267, 728
BsrDI GCAATG 1 cut(s) 570
BsrFI RCCGGY 1 cut(s) 704
BsrI ACTGG 3 cut(s) 724, 877, 1188
BssAI RCCGGY 1 cut(s) 704
BssECI CCNNGG 3 cut(s) 196, 490, 1220
BssMI GATC 7 cut(s) 270, 274, 457, 751, 979, 1032, 1060
BssNI GRCGYC 1 cut(s) 1212
Bst2UI CCWGG 3 cut(s) 197, 1098, 1221
Bst4CI ACNGT 1 cut(s) 583
Bst6I CTCTTC 1 cut(s) 519
BstACI GRCGYC 1 cut(s) 1212
BstBAI YACGTR 1 cut(s) 1165
BstC8I GCNNGC 1 cut(s) 336
BstDEI CTNAG 5 cut(s) 330, 447, 552, 609, 839
BstEII GGTNACC 1 cut(s) 830
BstENI CCTNNNNNAGG 1 cut(s) 1145
BstF5I GGATG 3 cut(s) 319, 686, 1106
BstKTI GATC 7 cut(s) 273, 277, 460, 754, 982, 1035, 1063
BstMAI GTCTC 3 cut(s) 243, 267, 728
BstMBI GATC 7 cut(s) 270, 274, 457, 751, 979, 1032, 1060
BstMCI CGRYCG 1 cut(s) 277
BstNI CCWGG 3 cut(s) 197, 1098, 1221
BstPI GGTNACC 1 cut(s) 830
BstSCI CCNGG 3 cut(s) 195, 1096, 1219
BstSFI CTRYAG 1 cut(s) 1047
BstV1I GCAGC 2 cut(s) 920, 1138
BstV2I GAAGAC 1 cut(s) 1112
BstX2I RGATCY 1 cut(s) 457
BstXI CCANNNNNNTGG 1 cut(s) 1208
BstYI RGATCY 1 cut(s) 457
Bsu15I ATCGAT 1 cut(s) 273
Bsu36I CCTNAGG 1 cut(s) 839
BsuI GTATCC 1 cut(s) 430
BsuRI GGCC 5 cut(s) 34, 221, 507, 876, 1219
BsuTUI ATCGAT 1 cut(s) 273
BtrI CACGTC 1 cut(s) 1157
BtsCI GGATG 3 cut(s) 319, 686, 1106
BtsIMutI CAGTG 2 cut(s) 717, 911
Cac8I GCNNGC 1 cut(s) 336
Cfr10I RCCGGY 1 cut(s) 704
Cfr13I GGNCC 5 cut(s) 33, 374, 506, 797, 1217
ClaI ATCGAT 1 cut(s) 273
CseI GACGC 1 cut(s) 1201
Csp6I GTAC 5 cut(s) 538, 775, 1026, 1162, 1193
CviAII CATG 2 cut(s) 433, 512
CviQI GTAC 5 cut(s) 538, 775, 1026, 1162, 1193
DdeI CTNAG 5 cut(s) 330, 447, 552, 609, 839
DpnI GATC 7 cut(s) 272, 276, 459, 753, 981, 1034, 1062
DpnII GATC 7 cut(s) 270, 274, 457, 751, 979, 1032, 1060
DraI TTTAAA 1 cut(s) 207
EaeI YGGCCR 1 cut(s) 874
Eam1104I CTCTTC 1 cut(s) 519
EarI CTCTTC 1 cut(s) 519
Eco24I GRGCYC 1 cut(s) 203
Eco31I GGTCTC 2 cut(s) 267, 728
Eco47I GGWCC 2 cut(s) 374, 797
Eco57I CTGAAG 1 cut(s) 935
Eco81I CCTNAGG 1 cut(s) 839
Eco91I GGTNACC 1 cut(s) 830
EcoNI CCTNNNNNAGG 1 cut(s) 1145
EcoO65I GGTNACC 1 cut(s) 830
EcoRI GAATTC 1 cut(s) 408
EcoRII CCWGG 3 cut(s) 195, 1096, 1219
EcoT38I GRGCYC 1 cut(s) 203
FaeI CATG 2 cut(s) 436, 515
FaiI YATR 4 cut(s) 434, 504, 513, 905
FalI AAGNNNNNCTT 3 cut(s) 34, 143, 175
FatI CATG 2 cut(s) 432, 511
FblI GTMKAC 1 cut(s) 23
Fnu4HI GCNGC 3 cut(s) 877, 909, 1152
FokI GGATG 3 cut(s) 326, 673, 1113
FriOI GRGCYC 1 cut(s) 203
Fsp4HI GCNGC 3 cut(s) 877, 909, 1152
FspBI CTAG 2 cut(s) 455, 693
GluI GCNGC 3 cut(s) 877, 909, 1152
GsaI CCCAGC 1 cut(s) 39
HaeIII GGCC 5 cut(s) 34, 221, 507, 876, 1219
HapII CCGG 1 cut(s) 705
HgaI GACGC 1 cut(s) 1201
Hin1I GRCGYC 1 cut(s) 1212
Hin1II CATG 2 cut(s) 436, 515
HincII GTYRAC 1 cut(s) 24
HindII GTYRAC 1 cut(s) 24
HinfI GANTC 3 cut(s) 236, 326, 486
HpaII CCGG 1 cut(s) 705
HphI GGTGA 7 cut(s) 115, 275, 293, 761, 778, 842, 949
Hpy166II GTNNAC 3 cut(s) 24, 777, 1193
Hpy188III TCNNGA 6 cut(s) 323, 483, 854, 986, 1058, 1064
Hpy8I GTNNAC 3 cut(s) 24, 777, 1193
Hpy99I CGWCG 3 cut(s) 138, 888, 1217
HpyAV CCTTC 6 cut(s) 232, 245, 577, 626, 1064, 1151
HpyCH4III ACNGT 1 cut(s) 583
HpyCH4IV ACGT 2 cut(s) 1156, 1164
HpyCH4V TGCA 9 cut(s) 100, 118, 189, 245, 479, 717, 1049, 1154, 1232
HpyF3I CTNAG 5 cut(s) 330, 447, 552, 609, 839
HpySE526I ACGT 2 cut(s) 1156, 1164
Hsp92I GRCGYC 1 cut(s) 1212
Hsp92II CATG 2 cut(s) 436, 515
KpnI GGTACC 1 cut(s) 1029
Kzo9I GATC 7 cut(s) 270, 274, 457, 751, 979, 1032, 1060
LmnI GCTCC 2 cut(s) 70, 739
Lsp1109I GCAGC 2 cut(s) 920, 1138
LweI GCATC 3 cut(s) 198, 488, 1219
MaeI CTAG 2 cut(s) 455, 693
MaeII ACGT 2 cut(s) 1156, 1164
MaeIII GTNAC 5 cut(s) 380, 419, 682, 821, 830
MalI GATC 7 cut(s) 272, 276, 459, 753, 981, 1034, 1062
MboI GATC 7 cut(s) 270, 274, 457, 751, 979, 1032, 1060
MflI RGATCY 1 cut(s) 457
MhlI GDGCHC 3 cut(s) 203, 283, 519
MluCI AATT 3 cut(s) 408, 729, 990
MlyI GAGTC 1 cut(s) 245
MmeI TCCRAC 2 cut(s) 633, 739
MnlI CCTC 9 cut(s) 96, 359, 420, 456, 485, 520, 700, 845, 891
MseI TTAA 3 cut(s) 146, 206, 933
MslI CAYNNNNRTG 1 cut(s) 828
MspI CCGG 1 cut(s) 705
MspR9I CCNGG 3 cut(s) 197, 1098, 1221
MvaI CCWGG 3 cut(s) 197, 1098, 1221
NdeII GATC 7 cut(s) 270, 274, 457, 751, 979, 1032, 1060
NlaIII CATG 2 cut(s) 436, 515
NlaIV GGNNCC 3 cut(s) 508, 564, 1027
NmuCI GTSAC 3 cut(s) 419, 821, 830
OliI CACNNNNGTG 1 cut(s) 828
PfeI GAWTC 2 cut(s) 326, 486
PflMI CCANNNNNTGG 1 cut(s) 310
PkrI GCNGC 3 cut(s) 878, 910, 1153
Ple19I CGATCG 1 cut(s) 277
PleI GAGTC 1 cut(s) 244
PpsI GAGTC 1 cut(s) 244
Ppu21I YACGTR 1 cut(s) 1165
PshBI ATTAAT 1 cut(s) 933
Psp6I CCWGG 3 cut(s) 195, 1096, 1219
PspEI GGTNACC 1 cut(s) 830
PspFI CCCAGC 1 cut(s) 35
PspGI CCWGG 3 cut(s) 195, 1096, 1219
PspN4I GGNNCC 3 cut(s) 508, 564, 1027
PspPI GGNCC 5 cut(s) 33, 374, 506, 797, 1217
PstI CTGCAG 1 cut(s) 1051
PsuI RGATCY 1 cut(s) 457
PvuI CGATCG 1 cut(s) 277
RsaI GTAC 5 cut(s) 539, 776, 1027, 1163, 1194
RsaNI GTAC 5 cut(s) 538, 775, 1026, 1162, 1193
RseI CAYNNNNRTG 1 cut(s) 828
SalI GTCGAC 1 cut(s) 22
SaqAI TTAA 3 cut(s) 146, 206, 933
SatI GCNGC 3 cut(s) 877, 909, 1152
Sau3AI GATC 7 cut(s) 270, 274, 457, 751, 979, 1032, 1060
Sau96I GGNCC 5 cut(s) 33, 374, 506, 797, 1217
SchI GAGTC 1 cut(s) 245
ScrFI CCNGG 3 cut(s) 197, 1098, 1221
SduI GDGCHC 3 cut(s) 203, 283, 519
SfaNI GCATC 3 cut(s) 198, 488, 1219
SfcI CTRYAG 1 cut(s) 1047
SinI GGWCC 2 cut(s) 374, 797
SmiMI CAYNNNNRTG 1 cut(s) 828
SmlI CTYRAG 2 cut(s) 424, 1064
SmoI CTYRAG 2 cut(s) 424, 1064
Sse9I AATT 3 cut(s) 408, 729, 990
SsiI CCGC 1 cut(s) 877
SspMI CTAG 2 cut(s) 455, 693
StyD4I CCNGG 3 cut(s) 195, 1096, 1219
TaaI ACNGT 1 cut(s) 583
TaiI ACGT 2 cut(s) 1159, 1167
TaqI TCGA 5 cut(s) 23, 273, 322, 412, 630
TasI AATT 3 cut(s) 408, 729, 990
TatI WGTACW 1 cut(s) 537
TauI GCSGC 1 cut(s) 879
TfiI GAWTC 2 cut(s) 326, 486
Tru1I TTAA 3 cut(s) 146, 206, 933
Tru9I TTAA 3 cut(s) 146, 206, 933
TscAI CASTG 2 cut(s) 724, 918
TseFI GTSAC 3 cut(s) 419, 821, 830
TseI GCWGC 2 cut(s) 908, 1151
Tsp45I GTSAC 3 cut(s) 419, 821, 830
TspDTI ATGAA 5 cut(s) 17, 164, 337, 559, 612
TspGWI ACGGA 3 cut(s) 122, 191, 1124
TspRI CASTG 2 cut(s) 724, 918
Van91I CCANNNNNTGG 1 cut(s) 310
VpaK11BI GGWCC 2 cut(s) 374, 797
VspI ATTAAT 1 cut(s) 933
XagI CCTNNNNNAGG 1 cut(s) 1145
XapI RAATTY 2 cut(s) 408, 990
XcmI CCANNNNNNNNNTGG 2 cut(s) 311, 814
XmiI GTMKAC 1 cut(s) 23
XspI CTAG 2 cut(s) 455, 693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.