pycom05g10700

Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
14143666 .. 14146166
2501 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g10700.3

Sequence Viewer

Length: 1296 bp
ATGAGGTATGAAAAGTTGTTCTCCAACAAGCAGCCCCGCCTCTCTCTTTCCCCCCTTCTTTCCTCTTCCTCTGGTTCGCCGCCTCACCTTCTCTTTTGCTGCTGCGTTTCTTCTTCTTCCCTCTTCAGCTCTTCAATTCCAAATCCCACAGCAGTCTTGGAGTTTGAGGCCTTTTCTCTGTTGGGTTTTCTTCCAGTAGCTCAAAGCTCCAAAAGTGGTGGGTTCACCATGAACAACCTCTCCGCTTTCAAAGCCCTGGACTCCAGTCCACTCTCCAGCCCTCGCTCCTTTGGGCCCCACAACCACATACCTATTCTCCTCCAGCGCCCGAGGAATGCTGTCTTATGCTCAGTGAAACAATCAATTGCCACCCCTTCACCTCTAAGTGTTGATAGTTCCCCTAACCAGGGGCTTAATCGAATTGAATCACTAACCCAGGTTTCGGGGGTGTTGGGCTGCCAATGGGGTGATGAAGGTAAAGGAAAACTTGTTGACATCTTGGCCCAGCACTTTGACATCGTTGCTCGTTGTCAGGGTGGAGCTAATGCTGGACACACCATTTACAATGCAGAGGGAAAGAAGTTTGCACTTCACCTTGTTCCGTCGGGTATTCTTAATGAAGAAACTCTTTGTGTTATTGGGAATGGAGTTGTGGTGCATCTTCCAGGGCTCTTTAAAGAGATTGATGGCCTTGAATCTAATGGAGTCTCCTGCAAGGGAAGGATATTGATCTCTGATCGTGCTCACCTGTTATTTGATTTCCACCAAGTAGTGGATGGACTTAGAGAATCTGAGCTTGCTAAATCATTCATTGGCACTACCAAGAGGGGCATTGGACCATGTTACTCTAACAAGGTTAACCGAAATGGTATTCGAGTGAGTGACTTGAGGTACATGGATACTTTTCCTCAGAAGCTAGATCTTCTATTATCAGATGCTGCATCAAGATTCCAAGGTTTTGAGTATGGCCCCCATGTGCTCAAAGAAGAAGTCGAAAAATACAAGAGATTTGCTGAGAGATTGGAACCCTTCATTGCGGATACTGTGCTTGTCGTGAATGAAGCCATCTCTGAGCAGAAAAAGATTTTGGTCGAAGGTGGTCAGGCAACAATGTTGGATATTGACTTTGGAACTTACCCCTTTGTAACATCCTCTAGCCCATCAGCTGGTGGGATTTGCACTGGTCTCGGAATTGCTCCCAGAGTTTTAGGTCGATCTGGTTGGAGTGGTGAAAGCGTACACTACAAGAGTTGGTTCTGGTCCCTTTCCCACAGAAATCTTGGGTCAAGGGGGTGA

Protein Analysis

432

Amino Acids

46.69

Weight (kDa)

8.46

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 772, 1166
AciI CCGC 4 cut(s) 37, 80, 243, 1037
AcuI CTGAAG 1 cut(s) 109
AfaI GTAC 2 cut(s) 893, 1239
AfiI CCNNNNNNNGG 5 cut(s) 406, 407, 442, 772, 1166
AgsI TTSAA 4 cut(s) 135, 250, 425, 695
AjnI CCWGG 4 cut(s) 255, 405, 435, 664
AjuI GAANNNNNNNTTGG 2 cut(s) 1070, 1102
AloI GAACNNNNNNTCC 2 cut(s) 224, 256
AluBI AGCT 7 cut(s) 129, 200, 207, 542, 796, 916, 1166
AluI AGCT 7 cut(s) 129, 200, 207, 542, 796, 916, 1166
Alw21I GWGCWC 2 cut(s) 745, 981
Alw26I GTCTC 2 cut(s) 712, 1190
AlwNI CAGNNNCTG 1 cut(s) 938
Ama87I CYCGRG 1 cut(s) 328
AoxI GGCC 5 cut(s) 168, 293, 501, 688, 967
ApaI GGGCCC 1 cut(s) 297
ApeKI GCWGC 5 cut(s) 31, 99, 102, 456, 938
ArsI GACNNNNNNTTYG 2 cut(s) 975, 1007
AspLEI GCGC 1 cut(s) 327
AspS9I GGNCC 6 cut(s) 293, 294, 502, 836, 968, 1260
AsuHPI GGTGA 7 cut(s) 77, 217, 369, 479, 584, 737, 1241
AvaI CYCGRG 1 cut(s) 328
AvaII GGWCC 2 cut(s) 836, 1260
BaeGI GKGCMC 1 cut(s) 297
BanII GRGCYC 2 cut(s) 297, 672
Bbv12I GWGCWC 2 cut(s) 745, 981
BbvI GCAGC 5 cut(s) 43, 86, 89, 443, 925
BccI CCATC 4 cut(s) 680, 770, 1073, 1168
BcgI CGANNNNNNTGC 2 cut(s) 1168, 1202
BciT130I CCWGG 4 cut(s) 257, 407, 437, 666
BciVI GTATCC 2 cut(s) 892, 1033
BcoDI GTCTC 2 cut(s) 712, 1190
BfaI CTAG 2 cut(s) 917, 1155
BfoI RGCGCY 1 cut(s) 328
BfuI GTATCC 2 cut(s) 892, 1033
BglII AGATCT 1 cut(s) 919
BisI GCNGC 6 cut(s) 32, 80, 100, 103, 457, 939
BlsI GCNGC 6 cut(s) 33, 81, 101, 104, 458, 940
Bme1390I CCNGG 4 cut(s) 257, 407, 437, 666
Bme18I GGWCC 2 cut(s) 836, 1260
BmeT110I CYCGRG 1 cut(s) 328
BmgT120I GGNCC 6 cut(s) 293, 294, 502, 836, 968, 1260
BmiI GGNNCC 5 cut(s) 295, 296, 970, 1026, 1262
BmrFI CCNGG 4 cut(s) 257, 407, 437, 666
BmsI GCATC 3 cut(s) 667, 925, 950
BoxI GACNNNNGTC 1 cut(s) 264
BpmI CTGGAG 3 cut(s) 247, 259, 305
BpuEI CTTGAG 1 cut(s) 907
BsaBI GATNNNNATC 1 cut(s) 728
BsaI GGTCTC 1 cut(s) 1190
BsaJI CCNNGG 6 cut(s) 255, 329, 406, 435, 665, 952
BsaXI ACNNNNNCTCC 6 cut(s) 224, 254, 300, 330, 639, 669
Bsc4I CCNNNNNNNGG 5 cut(s) 406, 407, 442, 772, 1166
Bse1I ACTGG 3 cut(s) 194, 264, 1186
Bse3DI GCAATG 1 cut(s) 1032
Bse8I GATNNNNATC 1 cut(s) 728
BseBI CCWGG 4 cut(s) 257, 407, 437, 666
BseDI CCNNGG 6 cut(s) 255, 329, 406, 435, 665, 952
BseGI GGATG 2 cut(s) 781, 1148
BseJI GATNNNNATC 1 cut(s) 728
BseLI CCNNNNNNNGG 5 cut(s) 406, 407, 442, 772, 1166
BseMI GCAATG 1 cut(s) 1032
BseMII CTCAG 5 cut(s) 363, 783, 923, 1005, 1062
BseNI ACTGG 3 cut(s) 194, 264, 1186
BseRI GAGGAG 1 cut(s) 308
BseSI GKGCMC 1 cut(s) 297
BseXI GCAGC 5 cut(s) 43, 86, 89, 443, 925
BseYI CCCAGC 1 cut(s) 504
BshFI GGCC 5 cut(s) 170, 295, 503, 690, 969
BsiHKAI GWGCWC 2 cut(s) 745, 981
BsiHKCI CYCGRG 1 cut(s) 328
BslFI GGGAC 1 cut(s) 1246
BslI CCNNNNNNNGG 5 cut(s) 406, 407, 442, 772, 1166
BsmAI GTCTC 2 cut(s) 712, 1190
BsmFI GGGAC 1 cut(s) 1246
BsmI GAATGC 1 cut(s) 340
BsnI GGCC 5 cut(s) 170, 295, 503, 690, 969
Bso31I GGTCTC 1 cut(s) 1190
BsoBI CYCGRG 1 cut(s) 328
Bsp120I GGGCCC 1 cut(s) 293
Bsp1286I GDGCHC 4 cut(s) 297, 672, 745, 981
Bsp143I GATC 4 cut(s) 729, 736, 919, 1214
BspACI CCGC 4 cut(s) 37, 80, 243, 1037
BspANI GGCC 5 cut(s) 170, 295, 503, 690, 969
BspCNI CTCAG 5 cut(s) 362, 784, 922, 1006, 1063
BspLI GGNNCC 5 cut(s) 295, 296, 970, 1026, 1262
BspQI GCTCTTC 1 cut(s) 136
BspTNI GGTCTC 1 cut(s) 1190
BsrDI GCAATG 1 cut(s) 1032
BsrI ACTGG 3 cut(s) 194, 264, 1186
BssECI CCNNGG 6 cut(s) 255, 329, 406, 435, 665, 952
BssMI GATC 4 cut(s) 729, 736, 919, 1214
BssT1I CCWWGG 1 cut(s) 952
Bst2UI CCWGG 4 cut(s) 257, 407, 437, 666
Bst4CI ACNGT 1 cut(s) 1045
Bst6I CTCTTC 3 cut(s) 70, 128, 136
BstC8I GCNNGC 1 cut(s) 798
BstDEI CTNAG 7 cut(s) 349, 383, 782, 792, 909, 1014, 1071
BstF5I GGATG 2 cut(s) 781, 1148
BstH2I RGCGCY 1 cut(s) 328
BstHHI GCGC 1 cut(s) 327
BstKTI GATC 4 cut(s) 732, 739, 922, 1217
BstMAI GTCTC 2 cut(s) 712, 1190
BstMBI GATC 4 cut(s) 729, 736, 919, 1214
BstMWI GCNNNNNNNGC 1 cut(s) 251
BstNI CCWGG 4 cut(s) 257, 407, 437, 666
BstPAI GACNNNNGTC 1 cut(s) 264
BstSCI CCNGG 4 cut(s) 255, 405, 435, 664
BstSLI GKGCMC 1 cut(s) 297
BstV1I GCAGC 5 cut(s) 43, 86, 89, 443, 925
BstX2I RGATCY 1 cut(s) 919
BstYI RGATCY 1 cut(s) 919
BsuI GTATCC 2 cut(s) 892, 1033
BsuRI GGCC 5 cut(s) 170, 295, 503, 690, 969
BtsCI GGATG 2 cut(s) 781, 1148
BtsIMutI CAGTG 2 cut(s) 357, 1179
Cac8I GCNNGC 1 cut(s) 798
CaiI CAGNNNCTG 1 cut(s) 938
CfoI GCGC 1 cut(s) 327
Cfr13I GGNCC 6 cut(s) 293, 294, 502, 836, 968, 1260
Csp6I GTAC 2 cut(s) 892, 1238
CspCI CAANNNNNGTGG 2 cut(s) 199, 234
CviAII CATG 4 cut(s) 229, 840, 895, 974
CviQI GTAC 2 cut(s) 892, 1238
DdeI CTNAG 7 cut(s) 349, 383, 782, 792, 909, 1014, 1071
DpnI GATC 4 cut(s) 731, 738, 921, 1216
DpnII GATC 4 cut(s) 729, 736, 919, 1214
DraI TTTAAA 1 cut(s) 676
Eam1104I CTCTTC 3 cut(s) 70, 128, 136
EarI CTCTTC 3 cut(s) 70, 128, 136
Eco130I CCWWGG 1 cut(s) 952
Eco147I AGGCCT 1 cut(s) 170
Eco24I GRGCYC 2 cut(s) 297, 672
Eco31I GGTCTC 1 cut(s) 1190
Eco47I GGWCC 2 cut(s) 836, 1260
Eco57I CTGAAG 1 cut(s) 109
Eco88I CYCGRG 1 cut(s) 328
EcoO109I RGGNCCY 1 cut(s) 294
EcoRII CCWGG 4 cut(s) 255, 405, 435, 664
EcoT14I CCWWGG 1 cut(s) 952
EcoT38I GRGCYC 2 cut(s) 297, 672
ErhI CCWWGG 1 cut(s) 952
FaeI CATG 4 cut(s) 232, 843, 898, 977
FaiI YATR 8 cut(s) 9, 230, 308, 346, 841, 896, 966, 975
FalI AAGNNNNNCTT 4 cut(s) 471, 503, 612, 644
FaqI GGGAC 1 cut(s) 1246
FatI CATG 4 cut(s) 228, 839, 894, 973
FauI CCCGC 1 cut(s) 44
Fnu4HI GCNGC 6 cut(s) 32, 80, 100, 103, 457, 939
FokI GGATG 2 cut(s) 788, 1135
FriOI GRGCYC 2 cut(s) 297, 672
Fsp4HI GCNGC 6 cut(s) 32, 80, 100, 103, 457, 939
FspBI CTAG 2 cut(s) 917, 1155
GlaI GCGC 1 cut(s) 326
GluI GCNGC 6 cut(s) 32, 80, 100, 103, 457, 939
GsaI CCCAGC 1 cut(s) 508
GsuI CTGGAG 3 cut(s) 247, 259, 305
HaeII RGCGCY 1 cut(s) 328
HaeIII GGCC 5 cut(s) 170, 295, 503, 690, 969
HhaI GCGC 1 cut(s) 327
Hin1II CATG 4 cut(s) 232, 843, 898, 977
Hin6I GCGC 1 cut(s) 325
HinP1I GCGC 1 cut(s) 325
HincII GTYRAC 2 cut(s) 493, 859
HindII GTYRAC 2 cut(s) 493, 859
HinfI GANTC 6 cut(s) 260, 425, 695, 705, 788, 948
HpaI GTTAAC 1 cut(s) 859
HphI GGTGA 7 cut(s) 77, 217, 369, 479, 584, 737, 1241
Hpy166II GTNNAC 5 cut(s) 225, 269, 493, 859, 1240
Hpy188I TCNGA 6 cut(s) 736, 793, 912, 934, 1072, 1190
Hpy188III TCNNGA 2 cut(s) 945, 1054
Hpy8I GTNNAC 5 cut(s) 225, 269, 493, 859, 1240
Hpy99I CGWCG 1 cut(s) 607
HpyAV CCTTC 7 cut(s) 65, 98, 384, 467, 714, 1039, 1088
HpyCH4III ACNGT 1 cut(s) 1045
HpyCH4V TGCA 6 cut(s) 569, 587, 658, 714, 941, 1179
HpyF10VI GCNNNNNNNGC 1 cut(s) 251
HpyF3I CTNAG 7 cut(s) 349, 383, 782, 792, 909, 1014, 1071
Hsp92II CATG 4 cut(s) 232, 843, 898, 977
HspAI GCGC 1 cut(s) 325
KspAI GTTAAC 1 cut(s) 859
Kzo9I GATC 4 cut(s) 729, 736, 919, 1214
LguI GCTCTTC 1 cut(s) 136
LmnI GCTCC 4 cut(s) 212, 290, 539, 1201
Lsp1109I GCAGC 5 cut(s) 43, 86, 89, 443, 925
LweI GCATC 3 cut(s) 667, 925, 950
MaeI CTAG 2 cut(s) 917, 1155
MaeIII GTNAC 3 cut(s) 842, 881, 1144
MalI GATC 4 cut(s) 731, 738, 921, 1216
MboI GATC 4 cut(s) 729, 736, 919, 1214
MfeI CAATTG 1 cut(s) 363
MflI RGATCY 1 cut(s) 919
MhlI GDGCHC 4 cut(s) 297, 672, 745, 981
MluCI AATT 4 cut(s) 135, 363, 420, 1191
MlyI GAGTC 2 cut(s) 254, 714
MmeI TCCRAC 3 cut(s) 48, 1095, 1202
MseI TTAA 4 cut(s) 414, 615, 675, 858
MspA1I CMGCKG 1 cut(s) 1166
MspR9I CCNGG 4 cut(s) 257, 407, 437, 666
MunI CAATTG 1 cut(s) 363
Mva1269I GAATGC 1 cut(s) 340
MvaI CCWGG 4 cut(s) 257, 407, 437, 666
MwoI GCNNNNNNNGC 1 cut(s) 251
NdeII GATC 4 cut(s) 729, 736, 919, 1214
NlaIII CATG 4 cut(s) 232, 843, 898, 977
NlaIV GGNNCC 5 cut(s) 295, 296, 970, 1026, 1262
NmuCI GTSAC 1 cut(s) 881
PceI AGGCCT 1 cut(s) 170
PciSI GCTCTTC 1 cut(s) 136
PctI GAATGC 1 cut(s) 340
PfeI GAWTC 4 cut(s) 425, 695, 788, 948
PflMI CCANNNNNTGG 2 cut(s) 772, 1166
PkrI GCNGC 6 cut(s) 33, 81, 101, 104, 458, 940
PleI GAGTC 2 cut(s) 254, 713
PpsI GAGTC 2 cut(s) 254, 713
PshAI GACNNNNGTC 1 cut(s) 264
Psp6I CCWGG 4 cut(s) 255, 405, 435, 664
PspFI CCCAGC 1 cut(s) 504
PspGI CCWGG 4 cut(s) 255, 405, 435, 664
PspN4I GGNNCC 5 cut(s) 295, 296, 970, 1026, 1262
PspOMI GGGCCC 1 cut(s) 293
PspPI GGNCC 6 cut(s) 293, 294, 502, 836, 968, 1260
PstNI CAGNNNCTG 1 cut(s) 938
PsuI RGATCY 1 cut(s) 919
PvuII CAGCTG 1 cut(s) 1166
RsaI GTAC 2 cut(s) 893, 1239
RsaNI GTAC 2 cut(s) 892, 1238
SapI GCTCTTC 1 cut(s) 136
SaqAI TTAA 4 cut(s) 414, 615, 675, 858
SatI GCNGC 6 cut(s) 32, 80, 100, 103, 457, 939
Sau3AI GATC 4 cut(s) 729, 736, 919, 1214
Sau96I GGNCC 6 cut(s) 293, 294, 502, 836, 968, 1260
SchI GAGTC 2 cut(s) 254, 714
ScrFI CCNGG 4 cut(s) 257, 407, 437, 666
SduI GDGCHC 4 cut(s) 297, 672, 745, 981
SfaNI GCATC 3 cut(s) 667, 925, 950
SinI GGWCC 2 cut(s) 836, 1260
SmlI CTYRAG 1 cut(s) 886
SmoI CTYRAG 1 cut(s) 886
Sse9I AATT 4 cut(s) 135, 363, 420, 1191
SseBI AGGCCT 1 cut(s) 170
SsiI CCGC 4 cut(s) 37, 80, 243, 1037
SspMI CTAG 2 cut(s) 917, 1155
StuI AGGCCT 1 cut(s) 170
StyD4I CCNGG 4 cut(s) 255, 405, 435, 664
StyI CCWWGG 1 cut(s) 952
TaaI ACNGT 1 cut(s) 1045
TaqI TCGA 5 cut(s) 418, 874, 993, 1092, 1213
TasI AATT 4 cut(s) 135, 363, 420, 1191
TauI GCSGC 1 cut(s) 82
TfiI GAWTC 4 cut(s) 425, 695, 788, 948
Tru1I TTAA 4 cut(s) 414, 615, 675, 858
Tru9I TTAA 4 cut(s) 414, 615, 675, 858
TscAI CASTG 2 cut(s) 357, 1186
TseFI GTSAC 1 cut(s) 881
TseI GCWGC 5 cut(s) 31, 99, 102, 456, 938
Tsp45I GTSAC 1 cut(s) 881
TspDTI ATGAA 7 cut(s) 24, 245, 486, 633, 799, 1021, 1074
TspGWI ACGGA 1 cut(s) 591
TspRI CASTG 2 cut(s) 357, 1186
Van91I CCANNNNNTGG 2 cut(s) 772, 1166
VpaK11BI GGWCC 2 cut(s) 836, 1260
XcmI CCANNNNNNNNNTGG 3 cut(s) 154, 773, 1277
XspI CTAG 2 cut(s) 917, 1155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.