Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0000352

Physical Location & Seq

Genomic Coordinates Forward (+)

70761247 .. 70767136

Gene Structure 5890 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0522100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGTTGCGAACGATTCTTCGAAGGGCAACAGCGACGGGCCCAAGGTCCGACGGCCCATGGAGGCTGACGGCGACGGCGAACTACTCGTCGTCCAAGGACACCAAGTCGACGGTGAAGAAGGCCAAGAAGAGTAACAAGTCTAAAGGCGAAGCCACTGCCGCCGCAGACGACGATGCCTACGCCGGCGCCGACGCCGATCTCTTCGACGATAAAGGTCGTGCTCGACGGCTTCAGGCCGACGAGAGCGATCCCTCGCTCGATGTGGGGCCCAATGGCCGACCTCTCTTCACTTCTACTCCGACGCTGGCTCAGCTCACCAGCATGGACAGCTGCTCCTACTTCAAGTTCAAGACGGAGGAGTTGAACAAGGTGTTGCCGGAGGGTTTGCCGTTGGGGATGGTGAGGGAGTTCGAGGAGGCAATGCAGAGCGCCGTGCTTGTTCGCCAGAGCTTTCTCGATCTCCGGGACAATTTCCGGCGGGTTGTGGACCCGCCGTTGGGATCAGCTAGGAGCAAAGGGTCAAAAGTTAAAAAACAGATTGTTTTGGATGGCCCTGTAAGCTGTGGAAAGAGTACGGCTCTTGCGATGCTAGTTCATTGGGCTCGTGAGGAAGGTTGGTTGGTTTTGTATGTTCCCAGAGGCAAGGACTGGACTCATGGAGGTTTTTTCTATAAAAACCCACAAACAGGTCTTTGGGATACACCTGTTCAAGCTGAAAATATTCTCAAGGATTTCCTAAAATTTAATGAATCCCGTTTAAACCAATTGTTGTGCCAAATATCTGATCCTATTCCATTGGGAGAGGGAGCTGGTGTTGGATGGATGAAAGATGGAATTGATTCCATGGCAATGCCTGAAGGTTCAACTCTGTATGACCTGGTTGATACAGGAATCAAGCACACTCATGCAGCTGTTGGAGTGGTGGTTCGTTTGAGGAAGGAGTTATCTCTAGTGAAAGATATCCCCGTGCTGATTGCGATTGATCAGTACAATAACTGGTTTACGTTCAGTGAGTATGAAGAGGCAGTAACTGTTCGTTCTACTCGACCAATACATGCCAAAGAACTTGCTACGGTGAAGGCTTTTAGATCTATGATCCATGATGACATGATGGTGGGTGCCTTTTCTCATTCAACAGCAGTAGGAAAACTTCGTCAAGACTTGCCAGATGTGCCCTCTGATGCTCGCATTAACTTTCCTCGTTACACTTTAGATGAAGCAGCAGCTGTTTGCCATTACTACCTTAGACAGAGGCTTATACACCGGGAAGCTTTCTCAGAGGAAAATTGCAAGAGAATATACTACTTGTCCAATGGAAACGGAGCAGAAATGAGATGGCTAGCTACTTTCATGCGGGAGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004019 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006163 GO:0006164 GO:0006167 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0016874 GO:0016879 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0034641 GO:0034654 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044208 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046033 GO:0046040 GO:0046390 GO:0046483 GO:0046686 GO:0048046 GO:0050896 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00250 ko01100 map00230 map00250 map01100

Pfam Domains

Protein Families

Adenylsucc_synt

Protein Analysis

454

Amino Acids

50.75

Weight (kDa)

8.41

Isoelectric Point (pI)

40.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAP3	PF10236	172 - 368	5.2e-32	Mitochondrial ribosomal death-associated protein 3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000352)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g24890 FvH4_7g21280 FvH4_7g21300 FvH4_7g21300 FvH4_7g21310 FvH4_7g21330 FvH4_7g21340 FvH4_7g21600 FvH4_7g21610 FvH4_7g21630
malus_domestica	MD07G1190400.v1.1 MD07G1190600.v1.1
prunus_persica	Prupe.2G228600_v2.0.a1 Prupe.6G198200_v2.0.a1
pyrus_communis	pycom07g18010
rosa_chinensis	RchiOBHm_Chr1g0365711 RchiOBHm_Chr1g0365721 RchiOBHm_Chr1g0365731 RchiOBHm_Chr1g0365991 RchiOBHm_Chr5g0044511 RchiOBHm_Chr6g0247041 RchiOBHm_Chr6g0247081
rosa_laevigata	RLG00000015223 RLG00000027405 RLG00000027406 RLG00000027407 RLG00000027408 RLG00000027409 RLG00000027411 RLG00000027413 RLG00000034277
rosa_multiflora	Rmu_co8279495.1_g000001 Rmu_co8358963.1_g000001 Rmu_co8520123.1_g000003 Rmu_sc0002093.1_g000019 Rmu_sc0002093.1_g000024 Rmu_sc0002093.1_g000025 Rmu_sc0002093.1_g000029 Rmu_sc0002476.1_g000002 Rmu_sc0002476.1_g000021 Rmu_sc0003466.1_g000011 Rmu_sc0004288.1_g000006 Rmu_sc0004288.1_g000007 Rmu_sc0004311.1_g000022 Rmu_sc0004311.1_g000023 Rmu_sc0004311.1_g000026 Rmu_sc0004311.1_g000033 Rmu_sc0004577.1_g000008 Rmu_sc0004645.1_g000005 Rmu_sc0004645.1_g000006 Rmu_sc0006406.1_g000011 Rmu_sc0006406.1_g000012 Rmu_sc0009967.1_g000002 Rmu_sc0011598.1_g000003 Rmu_ssc0000151.1_g000015
rosa_roxburghii	Rroxscaffold_1G00036500 Rroxscaffold_3G00276050 Rroxscaffold_4G00290950 Rroxscaffold_4G00290960 Rroxscaffold_4G00290970 Rroxscaffold_4G00290980 Rroxscaffold_4G00291000 Rroxscaffold_4G00291030 Rroxscaffold_4G00291060
rosa_rugosa	Rorug01G0322900 Rorug01G0323000 Rorug01G0323100 Rorug01G0323200 Rorug01G0323300 Rorug01G0323400 Rorug01G0323500 Rorug01G0323600 Rorug05G0214700 Rorug05G0522100
rosa_samantha	Rh1AG332000 Rh1AG332200 Rh1AG332300 Rh1AG334700 Rh1AG334800 Rh1AG335200 Rh1CG309900 Rh1CG310000 Rh1CG310100 Rh1DG325100 Rh1DG325300 Rh1DG325500 Rh5AG299000 Rh5BG306500 Rh5DG315800 Rh6AG037200 Rh6BG031900 Rh6BG032000 Rh6CG032300 Rh6CG032400 Rh6CG033200 Rh6DG030900
rosa_wichuraiana	Rw0G001530 Rw1G019070 Rw1G029470 Rw1G029480 Rw1G029490 Rw1G029500 Rw1G029510 Rw1G029700 Rw5G027640 Rw5G027670 Rw6G003160 Rw6G003190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	185, 1118
AccI	GTMKAC	1 cut(s)	107
AciI	CCGC	5 cut(s)	159, 162, 478, 491, 1354
AclWI	GGATC	4 cut(s)	242, 508, 779, 1090
AcoI	YGGCCR	1 cut(s)	274
AcsI	RAATTY	1 cut(s)	740
AcuI	CTGAAG	2 cut(s)	215, 876
AcyI	GRCGYC	2 cut(s)	186, 192
AfaI	GTAC	2 cut(s)	574, 989
AfiI	CCNNNNNNNGG	3 cut(s)	496, 497, 686
AgsI	TTSAA	6 cut(s)	343, 349, 364, 710, 864, 1134
AhdI	GACNNNNNGTC	1 cut(s)	103
AjnI	CCWGG	1 cut(s)	876
AloI	GAACNNNNNNTCC	2 cut(s)	909, 941
Alw21I	GWGCWC	1 cut(s)	223
AlwI	GGATC	4 cut(s)	242, 508, 779, 1090
AlwNI	CAGNNNCTG	2 cut(s)	1031, 1226
AoxI	GGCC	7 cut(s)	37, 52, 120, 234, 266, 274, 550
ApaI	GGGCCC	2 cut(s)	41, 270
ApeKI	GCWGC	4 cut(s)	330, 908, 1220, 1223
ApoI	RAATTY	1 cut(s)	740
ArsI	GACNNNNNNTTYG	2 cut(s)	71, 103
Asp700I	GAANNNNTTC	2 cut(s)	720, 838
AspLEI	GCGC	2 cut(s)	188, 431
AspS9I	GGNCC	8 cut(s)	37, 38, 45, 53, 266, 267, 487, 551
AsuC2I	CCSGG	2 cut(s)	464, 1265
AsuHPI	GGTGA	4 cut(s)	124, 307, 412, 1087
AsuII	TTCGAA	1 cut(s)	19
AsuNHI	GCTAGC	1 cut(s)	1339
AvaII	GGWCC	2 cut(s)	45, 487
BaeGI	GKGCMC	3 cut(s)	41, 270, 1176
BaeI	ACNNNNGTAYC	2 cut(s)	690, 723
BanI	GGYRCC	2 cut(s)	185, 1118
BanII	GRGCYC	3 cut(s)	41, 270, 604
BarI	GAAGNNNNNNTAC	2 cut(s)	1134, 1166
BauI	CACGAG	1 cut(s)	603
Bbv12I	GWGCWC	1 cut(s)	223
BbvI	GCAGC	4 cut(s)	317, 920, 1232, 1235
BccI	CCATC	6 cut(s)	391, 542, 813, 824, 1105, 1329
BceAI	ACGGC	8 cut(s)	67, 84, 90, 242, 373, 416, 478, 591
BcgI	CGANNNNNNTGC	2 cut(s)	137, 171
BciT130I	CCWGG	1 cut(s)	878
BciVI	GTATCC	1 cut(s)	691
BclI	TGATCA	1 cut(s)	982
BcnI	CCSGG	2 cut(s)	464, 1265
BfaI	CTAG	4 cut(s)	507, 590, 950, 1340
BfoI	RGCGCY	2 cut(s)	189, 432
BfuI	GTATCC	1 cut(s)	691
BglII	AGATCT	1 cut(s)	1088
BisI	GCNGC	6 cut(s)	159, 162, 331, 909, 1221, 1224
BlpI	GCTNAGC	1 cut(s)	309
BlsI	GCNGC	6 cut(s)	160, 163, 332, 910, 1222, 1225
Bme1390I	CCNGG	3 cut(s)	464, 878, 1265
Bme18I	GGWCC	2 cut(s)	45, 487
BmeRI	GACNNNNNGTC	1 cut(s)	103
BmgT120I	GGNCC	8 cut(s)	37, 38, 45, 53, 266, 267, 487, 551
BmiI	GGNNCC	6 cut(s)	39, 187, 267, 268, 489, 1120
BmrFI	CCNGG	3 cut(s)	464, 878, 1265
BmsI	GCATC	3 cut(s)	163, 576, 1171
BmtI	GCTAGC	1 cut(s)	1343
BplI	GAGNNNNNCTC	2 cut(s)	562, 594
Bpu1102I	GCTNAGC	1 cut(s)	309
Bpu14I	TTCGAA	1 cut(s)	19
BpuEI	CTTGAG	1 cut(s)	710
BpuMI	CCSGG	2 cut(s)	464, 1265
BsaHI	GRCGYC	2 cut(s)	186, 192
BsaJI	CCNNGG	4 cut(s)	41, 56, 93, 843
BsaXI	ACNNNNNCTCC	8 cut(s)	280, 310, 317, 347, 798, 828, 909, 939
Bsc4I	CCNNNNNNNGG	3 cut(s)	496, 497, 686
Bse118I	RCCGGY	1 cut(s)	182
Bse1I	ACTGG	2 cut(s)	653, 1001
Bse3DI	GCAATG	2 cut(s)	426, 855
BseBI	CCWGG	1 cut(s)	878
BseDI	CCNNGG	4 cut(s)	41, 56, 93, 843
BseGI	GGATG	4 cut(s)	402, 553, 824, 828
BseLI	CCNNNNNNNGG	3 cut(s)	496, 497, 686
BseMI	GCAATG	2 cut(s)	426, 855
BseMII	CTCAG	2 cut(s)	323, 1290
BseNI	ACTGG	2 cut(s)	653, 1001
BseRI	GAGGAG	2 cut(s)	371, 428
BseSI	GKGCMC	3 cut(s)	41, 270, 1176
BseXI	GCAGC	4 cut(s)	317, 920, 1232, 1235
BshFI	GGCC	7 cut(s)	39, 54, 122, 236, 268, 276, 552
BshNI	GGYRCC	2 cut(s)	185, 1118
BsiHKAI	GWGCWC	1 cut(s)	223
BsiSI	CCGG	5 cut(s)	183, 377, 463, 475, 1264
BslFI	GGGAC	1 cut(s)	479
BslI	CCNNNNNNNGG	3 cut(s)	496, 497, 686
BsmFI	GGGAC	1 cut(s)	479
BsnI	GGCC	7 cut(s)	39, 54, 122, 236, 268, 276, 552
Bsp119I	TTCGAA	1 cut(s)	19
Bsp120I	GGGCCC	2 cut(s)	37, 266
Bsp1286I	GDGCHC	5 cut(s)	41, 223, 270, 604, 1176
Bsp143I	GATC	8 cut(s)	196, 247, 457, 500, 784, 982, 1088, 1095
Bsp1720I	GCTNAGC	1 cut(s)	309
Bsp19I	CCATGG	2 cut(s)	56, 843
BspACI	CCGC	5 cut(s)	159, 162, 478, 491, 1354
BspANI	GGCC	7 cut(s)	39, 54, 122, 236, 268, 276, 552
BspCNI	CTCAG	2 cut(s)	322, 1289
BspLI	GGNNCC	6 cut(s)	39, 187, 267, 268, 489, 1120
BspOI	GCTAGC	1 cut(s)	1343
BspPI	GGATC	4 cut(s)	242, 508, 779, 1090
BspT104I	TTCGAA	1 cut(s)	19
BspT107I	GGYRCC	2 cut(s)	185, 1118
BsrDI	GCAATG	2 cut(s)	426, 855
BsrFI	RCCGGY	1 cut(s)	182
BsrI	ACTGG	2 cut(s)	653, 1001
BssAI	RCCGGY	1 cut(s)	182
BssECI	CCNNGG	4 cut(s)	41, 56, 93, 843
BssMI	GATC	8 cut(s)	196, 247, 457, 500, 784, 982, 1088, 1095
BssNI	GRCGYC	2 cut(s)	186, 192
BssSI	CACGAG	1 cut(s)	603
BssT1I	CCWWGG	4 cut(s)	41, 56, 93, 843
Bst2BI	CACGAG	1 cut(s)	603
Bst2UI	CCWGG	1 cut(s)	878
Bst4CI	ACNGT	3 cut(s)	112, 1033, 1075
Bst6I	CTCTTC	4 cut(s)	122, 206, 290, 1014
BstACI	GRCGYC	2 cut(s)	186, 192
BstBI	TTCGAA	1 cut(s)	19
BstC8I	GCNNGC	4 cut(s)	184, 306, 1186, 1341
BstDEI	CTNAG	3 cut(s)	309, 1244, 1276
BstDSI	CCRYGG	2 cut(s)	56, 843
BstF5I	GGATG	4 cut(s)	402, 553, 824, 828
BstH2I	RGCGCY	2 cut(s)	189, 432
BstHHI	GCGC	2 cut(s)	188, 431
BstKTI	GATC	8 cut(s)	199, 250, 460, 503, 787, 985, 1091, 1098
BstMBI	GATC	8 cut(s)	196, 247, 457, 500, 784, 982, 1088, 1095
BstMWI	GCNNNNNNNGC	5 cut(s)	158, 310, 327, 558, 1171
BstNI	CCWGG	1 cut(s)	878
BstNSI	RCATGY	1 cut(s)	1058
BstSCI	CCNGG	3 cut(s)	462, 876, 1263
BstSLI	GKGCMC	3 cut(s)	41, 270, 1176
BstV1I	GCAGC	4 cut(s)	317, 920, 1232, 1235
BstX2I	RGATCY	1 cut(s)	1088
BstYI	RGATCY	1 cut(s)	1088
BsuI	GTATCC	1 cut(s)	691
BsuRI	GGCC	7 cut(s)	39, 54, 122, 236, 268, 276, 552
BtgI	CCRYGG	2 cut(s)	56, 843
BtgZI	GCGATG	1 cut(s)	599
BtsCI	GGATG	4 cut(s)	402, 553, 824, 828
BtsI	GCAGTG	1 cut(s)	153
BtsIMutI	CAGTG	2 cut(s)	153, 1015
Cac8I	GCNNGC	4 cut(s)	184, 306, 1186, 1341
CaiI	CAGNNNCTG	2 cut(s)	1031, 1226
CfoI	GCGC	2 cut(s)	188, 431
Cfr10I	RCCGGY	1 cut(s)	182
Cfr13I	GGNCC	8 cut(s)	37, 38, 45, 53, 266, 267, 487, 551
CseI	GACGC	2 cut(s)	200, 310
CsiI	ACCWGGT	1 cut(s)	876
Csp6I	GTAC	2 cut(s)	573, 988
CviAII	CATG	9 cut(s)	57, 322, 656, 844, 905, 1055, 1100, 1108, 1351
CviQI	GTAC	2 cut(s)	573, 988
DdeI	CTNAG	3 cut(s)	309, 1244, 1276
DinI	GGCGCC	1 cut(s)	187
DpnI	GATC	8 cut(s)	198, 249, 459, 502, 786, 984, 1090, 1097
DpnII	GATC	8 cut(s)	196, 247, 457, 500, 784, 982, 1088, 1095
DraI	TTTAAA	1 cut(s)	759
DriI	GACNNNNNGTC	1 cut(s)	103
EaeI	YGGCCR	1 cut(s)	274
Eam1104I	CTCTTC	4 cut(s)	122, 206, 290, 1014
Eam1105I	GACNNNNNGTC	1 cut(s)	103
EarI	CTCTTC	4 cut(s)	122, 206, 290, 1014
Eco130I	CCWWGG	4 cut(s)	41, 56, 93, 843
Eco24I	GRGCYC	3 cut(s)	41, 270, 604
Eco32I	GATATC	1 cut(s)	961
Eco47I	GGWCC	2 cut(s)	45, 487
Eco57I	CTGAAG	2 cut(s)	215, 876
EcoO109I	RGGNCCY	1 cut(s)	266
EcoRII	CCWGG	1 cut(s)	876
EcoRV	GATATC	1 cut(s)	961
EcoT14I	CCWWGG	4 cut(s)	41, 56, 93, 843
EcoT38I	GRGCYC	3 cut(s)	41, 270, 604
EgeI	GGCGCC	1 cut(s)	187
EheI	GGCGCC	1 cut(s)	187
ErhI	CCWWGG	4 cut(s)	41, 56, 93, 843
FaeI	CATG	9 cut(s)	60, 325, 659, 847, 908, 1058, 1103, 1111, 1354
FaqI	GGGAC	1 cut(s)	479
FatI	CATG	9 cut(s)	56, 321, 655, 843, 904, 1054, 1099, 1107, 1350
FauI	CCCGC	3 cut(s)	471, 498, 1347
FbaI	TGATCA	1 cut(s)	982
FblI	GTMKAC	1 cut(s)	107
Fnu4HI	GCNGC	6 cut(s)	159, 162, 331, 909, 1221, 1224
FokI	GGATG	4 cut(s)	409, 560, 831, 835
FriOI	GRGCYC	3 cut(s)	41, 270, 604
Fsp4HI	GCNGC	6 cut(s)	159, 162, 331, 909, 1221, 1224
FspBI	CTAG	4 cut(s)	507, 590, 950, 1340
GlaI	GCGC	2 cut(s)	187, 430
GluI	GCNGC	6 cut(s)	159, 162, 331, 909, 1221, 1224
HaeII	RGCGCY	2 cut(s)	189, 432
HaeIII	GGCC	7 cut(s)	39, 54, 122, 236, 268, 276, 552
HapII	CCGG	5 cut(s)	183, 377, 463, 475, 1264
HgaI	GACGC	2 cut(s)	200, 310
HhaI	GCGC	2 cut(s)	188, 431
Hin1I	GRCGYC	2 cut(s)	186, 192
Hin1II	CATG	9 cut(s)	60, 325, 659, 847, 908, 1058, 1103, 1111, 1354
Hin6I	GCGC	2 cut(s)	186, 429
HinP1I	GCGC	2 cut(s)	186, 429
HincII	GTYRAC	1 cut(s)	108
HindII	GTYRAC	1 cut(s)	108
HindIII	AAGCTT	1 cut(s)	1269
HinfI	GANTC	5 cut(s)	13, 652, 749, 839, 891
HpaII	CCGG	5 cut(s)	183, 377, 463, 475, 1264
HphI	GGTGA	4 cut(s)	124, 307, 412, 1087
Hpy166II	GTNNAC	3 cut(s)	108, 487, 1002
Hpy188I	TCNGA	5 cut(s)	49, 300, 784, 1180, 1279
Hpy188III	TCNNGA	4 cut(s)	349, 455, 605, 1157
Hpy8I	GTNNAC	3 cut(s)	108, 487, 1002
HpyAV	CCTTC	6 cut(s)	15, 112, 605, 851, 931, 1072
HpyCH4III	ACNGT	3 cut(s)	112, 1033, 1075
HpyCH4IV	ACGT	1 cut(s)	1004
HpyCH4V	TGCA	3 cut(s)	424, 908, 1290
HpyF10VI	GCNNNNNNNGC	5 cut(s)	158, 310, 327, 558, 1171
HpyF3I	CTNAG	3 cut(s)	309, 1244, 1276
HpySE526I	ACGT	1 cut(s)	1004
Hsp92I	GRCGYC	2 cut(s)	186, 192
Hsp92II	CATG	9 cut(s)	60, 325, 659, 847, 908, 1058, 1103, 1111, 1354
HspAI	GCGC	2 cut(s)	186, 429
KasI	GGCGCC	1 cut(s)	185
KroI	GCCGGC	1 cut(s)	182
KroNI	GCCGGC	1 cut(s)	184
Ksp22I	TGATCA	1 cut(s)	982
Kzo9I	GATC	8 cut(s)	196, 247, 457, 500, 784, 982, 1088, 1095
LmnI	GCTCC	5 cut(s)	338, 510, 806, 1322, 1357
Lsp1109I	GCAGC	4 cut(s)	317, 920, 1232, 1235
LweI	GCATC	3 cut(s)	163, 576, 1171
MabI	ACCWGGT	1 cut(s)	876
MaeI	CTAG	4 cut(s)	507, 590, 950, 1340
MaeII	ACGT	1 cut(s)	1004
MaeIII	GTNAC	3 cut(s)	131, 1027, 1202
MalI	GATC	8 cut(s)	198, 249, 459, 502, 786, 984, 1090, 1097
MboI	GATC	8 cut(s)	196, 247, 457, 500, 784, 982, 1088, 1095
MboII	GAAGA	6 cut(s)	8, 127, 139, 193, 277, 1031
MfeI	CAATTG	1 cut(s)	764
MflI	RGATCY	1 cut(s)	1088
MhlI	GDGCHC	5 cut(s)	41, 223, 270, 604, 1176
MluCI	AATT	5 cut(s)	469, 740, 764, 834, 1285
Mly113I	GGCGCC	1 cut(s)	186
MlyI	GAGTC	1 cut(s)	646
MmeI	TCCRAC	4 cut(s)	72, 323, 796, 895
MreI	CGCCGGCG	1 cut(s)	182
MroNI	GCCGGC	1 cut(s)	182
MroXI	GAANNNNTTC	2 cut(s)	720, 838
MseI	TTAA	4 cut(s)	528, 744, 758, 1191
MslI	CAYNNNNRTG	4 cut(s)	320, 848, 903, 1112
MspA1I	CMGCKG	3 cut(s)	330, 911, 1226
MspI	CCGG	5 cut(s)	183, 377, 463, 475, 1264
MspR9I	CCNGG	3 cut(s)	464, 878, 1265
MssI	GTTTAAAC	1 cut(s)	759
MunI	CAATTG	1 cut(s)	764
MvaI	CCWGG	1 cut(s)	878
MwoI	GCNNNNNNNGC	5 cut(s)	158, 310, 327, 558, 1171
NaeI	GCCGGC	1 cut(s)	184
NarI	GGCGCC	1 cut(s)	186
NciI	CCSGG	2 cut(s)	464, 1265
NcoI	CCATGG	2 cut(s)	56, 843
NdeII	GATC	8 cut(s)	196, 247, 457, 500, 784, 982, 1088, 1095
NgoMIV	GCCGGC	1 cut(s)	182
NheI	GCTAGC	1 cut(s)	1339
NlaIII	CATG	9 cut(s)	60, 325, 659, 847, 908, 1058, 1103, 1111, 1354
NlaIV	GGNNCC	6 cut(s)	39, 187, 267, 268, 489, 1120
NspI	RCATGY	1 cut(s)	1058
NspV	TTCGAA	1 cut(s)	19
PcsI	WCGNNNNNNNCGW	4 cut(s)	74, 186, 581, 1042
PdiI	GCCGGC	1 cut(s)	184
PdmI	GAANNNNTTC	2 cut(s)	720, 838
PfeI	GAWTC	4 cut(s)	13, 749, 839, 891
PfoI	TCCNGGA	1 cut(s)	462
PkrI	GCNGC	6 cut(s)	160, 163, 332, 910, 1222, 1225
PleI	GAGTC	1 cut(s)	646
PluTI	GGCGCC	1 cut(s)	189
PmeI	GTTTAAAC	1 cut(s)	759
PpsI	GAGTC	1 cut(s)	646
Psp6I	CCWGG	1 cut(s)	876
PspGI	CCWGG	1 cut(s)	876
PspN4I	GGNNCC	6 cut(s)	39, 187, 267, 268, 489, 1120
PspOMI	GGGCCC	2 cut(s)	37, 266
PspPI	GGNCC	8 cut(s)	37, 38, 45, 53, 266, 267, 487, 551
PstNI	CAGNNNCTG	2 cut(s)	1031, 1226
PsuI	RGATCY	1 cut(s)	1088
PvuII	CAGCTG	3 cut(s)	330, 911, 1226
RsaI	GTAC	2 cut(s)	574, 989
RsaNI	GTAC	2 cut(s)	573, 988
RseI	CAYNNNNRTG	4 cut(s)	320, 848, 903, 1112
SalI	GTCGAC	1 cut(s)	106
SaqAI	TTAA	4 cut(s)	528, 744, 758, 1191
SatI	GCNGC	6 cut(s)	159, 162, 331, 909, 1221, 1224
Sau3AI	GATC	8 cut(s)	196, 247, 457, 500, 784, 982, 1088, 1095
Sau96I	GGNCC	8 cut(s)	37, 38, 45, 53, 266, 267, 487, 551
SchI	GAGTC	1 cut(s)	646
ScrFI	CCNGG	3 cut(s)	464, 878, 1265
SduI	GDGCHC	5 cut(s)	41, 223, 270, 604, 1176
SexAI	ACCWGGT	1 cut(s)	876
SfaNI	GCATC	3 cut(s)	163, 576, 1171
SfoI	GGCGCC	1 cut(s)	187
SfuI	TTCGAA	1 cut(s)	19
SgrAI	CRCCGGYG	1 cut(s)	182
SinI	GGWCC	2 cut(s)	45, 487
SmiMI	CAYNNNNRTG	4 cut(s)	320, 848, 903, 1112
SmlI	CTYRAG	1 cut(s)	725
SmoI	CTYRAG	1 cut(s)	725
Sse9I	AATT	5 cut(s)	469, 740, 764, 834, 1285
SsiI	CCGC	5 cut(s)	159, 162, 478, 491, 1354
SspDI	GGCGCC	1 cut(s)	185
SspI	AATATT	1 cut(s)	721
SspMI	CTAG	4 cut(s)	507, 590, 950, 1340
StyD4I	CCNGG	3 cut(s)	462, 876, 1263
StyI	CCWWGG	4 cut(s)	41, 56, 93, 843
TaaI	ACNGT	3 cut(s)	112, 1033, 1075
TaiI	ACGT	1 cut(s)	1007
TaqI	TCGA	8 cut(s)	19, 107, 204, 223, 258, 411, 456, 1045
TasI	AATT	5 cut(s)	469, 740, 764, 834, 1285
TatI	WGTACW	1 cut(s)	987
TauI	GCSGC	2 cut(s)	161, 164
TfiI	GAWTC	4 cut(s)	13, 749, 839, 891
Tru1I	TTAA	4 cut(s)	528, 744, 758, 1191
Tru9I	TTAA	4 cut(s)	528, 744, 758, 1191
TscAI	CASTG	2 cut(s)	160, 1015
TseI	GCWGC	4 cut(s)	330, 908, 1220, 1223
TspDTI	ATGAA	6 cut(s)	584, 762, 839, 1032, 1230, 1339
TspGWI	ACGGA	2 cut(s)	368, 1335
TspRI	CASTG	2 cut(s)	160, 1015
VpaK11BI	GGWCC	2 cut(s)	45, 487
XapI	RAATTY	1 cut(s)	740
XceI	RCATGY	1 cut(s)	1058
XmiI	GTMKAC	1 cut(s)	107
XmnI	GAANNNNTTC	2 cut(s)	720, 838
XspI	CTAG	4 cut(s)	507, 590, 950, 1340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.