Rorug01G0323400

Protein of unknown function (DUF674)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000352
Physical Location & Seq
Forward (+)
44222176 .. 44225072
2897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0323400.1

Sequence Viewer

Length: 1263 bp
ATGGAGAGGCTCCAAGGACCCATTAATCCCTGTTTCTTTGGAGACCATTTGGATTTGCAGTGCTTAGAGCAAGGATTCACCTCCACCACCACCACCACCACCACACATGGCTTGAGATTTGAGGAAGAAGAAGCACTGTACCTCTCAGGCTTCGAAGATAGAATGCCATTTCTTCAGATGCTACAAAGCATTGATTTCCCCCCGTGTGATTTCACTCAAAAAGAGCCAAGCTTTCAAGCACTGTTGAGATTACAGCACAAGACCGGTACAACTTGGCCTGAAATGGAAAATACCCAAAGTTCCCAAATTCACACACTTGAGGCACTTGAGAGCTGTGTAACTCAAGACAATCAACAACAGTTGTATTCACCGGCAAAATCTGAAGGAAGAGACCCTCACCAAAACCCTCTTTCAGTTTCCGGTACTCTTGAGGGTGGTGGTGGTGTGAGCTCAGATTGCAACCAAGAAATGCAGCAACTCAACTCAGCGAAAATGGGTCCTAACCAGACCCTGCAGACCCAGTTCACCAAGTCGGCTTCTTCTCCGGCCACCCGAGAGAGAAAAAAGCGCAAGAGAACAAGACCAACCAAGAACAAAGAGGAAGTAGAGAGCCAGAGAATGACCCACATTGCTGTTGAGCGCAACCGCAGACGCCAAATGAATGACCATCTCAATGGTCTCAGATCCCTCATGCCCCCTTCCTACATTCAAAGGGGTGACCAAGCATCCATAGTTGGGGGTGCAATAGATTTTGTGAAGGAATTGGAGCAGCACCTTCAGTCCCTTGAAGCCCAAAAGAGAATGAAAAGAGCTGAAGGCTTCACCACCAATGTTGACCCTAACAATAACAACTCCTTGAACTCATCTTCACCATCTTCATCATCGGCCATGGCAATGCCTTCAAATGGGATGTTCATGTCTCTCTCCCAATGCAGAATCGCGTCTACTGAGGAAGGAAACACTTGTGGGGATGATGGAGTCACAGCACAAAACAAGTCTGAGGTTGCAGAAGTAGATGTCACAGTGATCCAAACCCATGTGAACTTGAAGGTCCAGTGTCAAAAGAGGCCTGGCCAGTTGGTGAGAGCCCTTATTGCCTTGGAAGATCTCAGGCTAACAGTTTTGCACCTCAACATTACTTCTTCAGAAGACAAGGTTCTTTACTCTTTCAATCTCAAGATTGAGGAGGGATGTAAGTTAGGATCAGCAGATAACATTGCCAGAGCAGTACATCAAATATTCAGCTTCATCAATGGCAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

420

Amino Acids

46.79

Weight (kDa)

5.93

Isoelectric Point (pI)

59.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 205 - 256 2.9e-12 Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant PF22754 337 - 414 3.2e-10 Plant bHLH transcription factor, ACT-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000352)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g24890 FvH4_7g21280 FvH4_7g21300 FvH4_7g21300 FvH4_7g21310 FvH4_7g21330 FvH4_7g21340 FvH4_7g21600 FvH4_7g21610 FvH4_7g21630
malus_domestica MD07G1190400.v1.1 MD07G1190600.v1.1
prunus_persica Prupe.2G228600_v2.0.a1 Prupe.6G198200_v2.0.a1
pyrus_communis pycom07g18010
rosa_chinensis RchiOBHm_Chr1g0365711 RchiOBHm_Chr1g0365721 RchiOBHm_Chr1g0365731 RchiOBHm_Chr1g0365991 RchiOBHm_Chr5g0044511 RchiOBHm_Chr6g0247041 RchiOBHm_Chr6g0247081
rosa_laevigata RLG00000015223 RLG00000027405 RLG00000027406 RLG00000027407 RLG00000027408 RLG00000027409 RLG00000027411 RLG00000027413 RLG00000034277
rosa_multiflora Rmu_co8279495.1_g000001 Rmu_co8358963.1_g000001 Rmu_co8520123.1_g000003 Rmu_sc0002093.1_g000019 Rmu_sc0002093.1_g000024 Rmu_sc0002093.1_g000025 Rmu_sc0002093.1_g000029 Rmu_sc0002476.1_g000002 Rmu_sc0002476.1_g000021 Rmu_sc0003466.1_g000011 Rmu_sc0004288.1_g000006 Rmu_sc0004288.1_g000007 Rmu_sc0004311.1_g000022 Rmu_sc0004311.1_g000023 Rmu_sc0004311.1_g000026 Rmu_sc0004311.1_g000033 Rmu_sc0004577.1_g000008 Rmu_sc0004645.1_g000005 Rmu_sc0004645.1_g000006 Rmu_sc0006406.1_g000011 Rmu_sc0006406.1_g000012 Rmu_sc0009967.1_g000002 Rmu_sc0011598.1_g000003 Rmu_ssc0000151.1_g000015
rosa_roxburghii Rroxscaffold_1G00036500 Rroxscaffold_3G00276050 Rroxscaffold_4G00290950 Rroxscaffold_4G00290960 Rroxscaffold_4G00290970 Rroxscaffold_4G00290980 Rroxscaffold_4G00291000 Rroxscaffold_4G00291030 Rroxscaffold_4G00291060
rosa_rugosa Rorug01G0322900 Rorug01G0323000 Rorug01G0323100 Rorug01G0323200 Rorug01G0323300 Rorug01G0323400 Rorug01G0323500 Rorug01G0323600 Rorug05G0214700 Rorug05G0522100
rosa_samantha Rh1AG332000 Rh1AG332200 Rh1AG332300 Rh1AG334700 Rh1AG334800 Rh1AG335200 Rh1CG309900 Rh1CG310000 Rh1CG310100 Rh1DG325100 Rh1DG325300 Rh1DG325500 Rh5AG299000 Rh5BG306500 Rh5DG315800 Rh6AG037200 Rh6BG031900 Rh6BG032000 Rh6CG032300 Rh6CG032400 Rh6CG033200 Rh6DG030900
rosa_wichuraiana Rw0G001530 Rw1G019070 Rw1G029470 Rw1G029480 Rw1G029490 Rw1G029500 Rw1G029510 Rw1G029700 Rw5G027640 Rw5G027670 Rw6G003160 Rw6G003190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 944
AccII CGCG 1 cut(s) 941
AciI CCGC 1 cut(s) 646
AclWI GGATC 3 cut(s) 678, 1021, 1210
AcoI YGGCCR 3 cut(s) 546, 885, 1072
AcsI RAATTY 1 cut(s) 306
AcuI CTGAAG 5 cut(s) 158, 402, 761, 834, 1128
AcyI GRCGYC 1 cut(s) 652
AfaI GTAC 4 cut(s) 140, 268, 424, 1230
AfiI CCNNNNNNNGG 2 cut(s) 735, 905
AgeI ACCGGT 1 cut(s) 263
AgsI TTSAA 7 cut(s) 236, 710, 788, 859, 903, 1048, 1171
AjnI CCWGG 1 cut(s) 1069
AluBI AGCT 6 cut(s) 231, 333, 450, 812, 1245, 1260
AluI AGCT 6 cut(s) 231, 333, 450, 812, 1245, 1260
Alw21I GWGCWC 1 cut(s) 452
Alw26I GTCTC 4 cut(s) 36, 384, 683, 924
AlwI GGATC 3 cut(s) 678, 1021, 1210
AlwNI CAGNNNCTG 1 cut(s) 511
Ama87I CYCGRG 1 cut(s) 552
AoxI GGCC 5 cut(s) 275, 546, 885, 1067, 1072
ApeKI GCWGC 3 cut(s) 472, 769, 1257
ApoI RAATTY 1 cut(s) 306
AseI ATTAAT 1 cut(s) 24
AsiGI ACCGGT 1 cut(s) 263
AspLEI GCGC 2 cut(s) 570, 642
AspS9I GGNCC 3 cut(s) 17, 497, 1051
AsuHPI GGTGA 8 cut(s) 70, 360, 389, 517, 728, 814, 861, 1093
AsuII TTCGAA 1 cut(s) 153
AvaI CYCGRG 1 cut(s) 552
AvaII GGWCC 3 cut(s) 17, 497, 1051
BalI TGGCCA 1 cut(s) 1074
BanII GRGCYC 2 cut(s) 452, 1090
BbsI GAAGAC 1 cut(s) 1155
Bbv12I GWGCWC 1 cut(s) 452
BbvI GCAGC 2 cut(s) 484, 781
BccI CCATC 3 cut(s) 675, 880, 968
BciT130I CCWGG 1 cut(s) 1071
BcoDI GTCTC 4 cut(s) 36, 384, 683, 924
BfmI CTRYAG 1 cut(s) 512
BglII AGATCT 1 cut(s) 1105
BisI GCNGC 3 cut(s) 473, 770, 1258
BlsI GCNGC 3 cut(s) 474, 771, 1259
Bme1390I CCNGG 1 cut(s) 1071
Bme18I GGWCC 3 cut(s) 17, 497, 1051
BmeT110I CYCGRG 1 cut(s) 552
BmgT120I GGNCC 3 cut(s) 17, 497, 1051
BmiI GGNNCC 3 cut(s) 11, 19, 498
BmrFI CCNGG 1 cut(s) 1071
BmrI ACTGGG 1 cut(s) 514
BmsI GCATC 2 cut(s) 168, 734
BmuI ACTGGG 1 cut(s) 514
BpiI GAAGAC 1 cut(s) 1155
Bpu14I TTCGAA 1 cut(s) 153
BpuEI CTTGAG 6 cut(s) 133, 327, 338, 347, 449, 1160
BsaHI GRCGYC 1 cut(s) 652
BsaI GGTCTC 3 cut(s) 36, 384, 683
BsaJI CCNNGG 3 cut(s) 13, 888, 1098
BsaWI WCCGGW 2 cut(s) 263, 419
Bsc4I CCNNNNNNNGG 2 cut(s) 735, 905
Bse118I RCCGGY 2 cut(s) 263, 370
Bse1I ACTGG 3 cut(s) 520, 1054, 1075
Bse3DI GCAATG 3 cut(s) 627, 900, 1215
BseBI CCWGG 1 cut(s) 1071
BseDI CCNNGG 3 cut(s) 13, 888, 1098
BseGI GGATG 4 cut(s) 725, 915, 976, 1196
BseLI CCNNNNNNNGG 2 cut(s) 735, 905
BseMI GCAATG 3 cut(s) 627, 900, 1215
BseMII CTCAG 7 cut(s) 159, 465, 498, 694, 939, 990, 1123
BseNI ACTGG 3 cut(s) 520, 1054, 1075
BseRI GAGGAG 1 cut(s) 1199
BseXI GCAGC 2 cut(s) 484, 781
Bsh1236I CGCG 1 cut(s) 941
BshFI GGCC 5 cut(s) 277, 548, 887, 1069, 1074
BshTI ACCGGT 1 cut(s) 263
BsiHKAI GWGCWC 1 cut(s) 452
BsiHKCI CYCGRG 1 cut(s) 552
BsiSI CCGG 4 cut(s) 264, 371, 420, 545
BslFI GGGAC 1 cut(s) 766
BslI CCNNNNNNNGG 2 cut(s) 735, 905
BsmAI GTCTC 4 cut(s) 36, 384, 683, 924
BsmFI GGGAC 1 cut(s) 766
BsmI GAATGC 1 cut(s) 168
BsnI GGCC 5 cut(s) 277, 548, 887, 1069, 1074
Bso31I GGTCTC 3 cut(s) 36, 384, 683
BsoBI CYCGRG 1 cut(s) 552
Bsp119I TTCGAA 1 cut(s) 153
Bsp1286I GDGCHC 2 cut(s) 452, 1090
Bsp143I GATC 4 cut(s) 683, 1026, 1105, 1202
Bsp19I CCATGG 1 cut(s) 888
BspACI CCGC 1 cut(s) 646
BspANI GGCC 5 cut(s) 277, 548, 887, 1069, 1074
BspCNI CTCAG 7 cut(s) 158, 464, 497, 693, 940, 991, 1122
BspFNI CGCG 1 cut(s) 941
BspLI GGNNCC 3 cut(s) 11, 19, 498
BspMAI CTGCAG 1 cut(s) 516
BspPI GGATC 3 cut(s) 678, 1021, 1210
BspT104I TTCGAA 1 cut(s) 153
BspTNI GGTCTC 3 cut(s) 36, 384, 683
BsrDI GCAATG 3 cut(s) 627, 900, 1215
BsrFI RCCGGY 2 cut(s) 263, 370
BsrI ACTGG 3 cut(s) 520, 1054, 1075
BssAI RCCGGY 2 cut(s) 263, 370
BssECI CCNNGG 3 cut(s) 13, 888, 1098
BssMI GATC 4 cut(s) 683, 1026, 1105, 1202
BssNI GRCGYC 1 cut(s) 652
BssT1I CCWWGG 3 cut(s) 13, 888, 1098
Bst2UI CCWGG 1 cut(s) 1071
Bst4CI ACNGT 5 cut(s) 138, 243, 360, 1024, 1120
Bst6I CTCTTC 1 cut(s) 382
BstACI GRCGYC 1 cut(s) 652
BstBI TTCGAA 1 cut(s) 153
BstDEI CTNAG 8 cut(s) 64, 145, 451, 484, 680, 948, 999, 1109
BstDSI CCRYGG 1 cut(s) 888
BstEII GGTNACC 1 cut(s) 716
BstF5I GGATG 4 cut(s) 725, 915, 976, 1196
BstFNI CGCG 1 cut(s) 941
BstHHI GCGC 2 cut(s) 570, 642
BstKTI GATC 4 cut(s) 686, 1029, 1108, 1205
BstMAI GTCTC 4 cut(s) 36, 384, 683, 924
BstMBI GATC 4 cut(s) 683, 1026, 1105, 1202
BstMWI GCNNNNNNNGC 2 cut(s) 456, 1094
BstNI CCWGG 1 cut(s) 1071
BstPI GGTNACC 1 cut(s) 716
BstSCI CCNGG 1 cut(s) 1069
BstSFI CTRYAG 1 cut(s) 512
BstUI CGCG 1 cut(s) 941
BstV1I GCAGC 2 cut(s) 484, 781
BstV2I GAAGAC 1 cut(s) 1155
BstX2I RGATCY 2 cut(s) 683, 1105
BstXI CCANNNNNNTGG 1 cut(s) 674
BstYI RGATCY 2 cut(s) 683, 1105
BsuRI GGCC 5 cut(s) 277, 548, 887, 1069, 1074
BtgI CCRYGG 1 cut(s) 888
BtsCI GGATG 4 cut(s) 725, 915, 976, 1196
BtsI GCAGTG 1 cut(s) 65
BtsIMutI CAGTG 5 cut(s) 65, 134, 239, 1029, 1061
CaiI CAGNNNCTG 1 cut(s) 511
CfoI GCGC 2 cut(s) 570, 642
Cfr10I RCCGGY 2 cut(s) 263, 370
Cfr13I GGNCC 3 cut(s) 17, 497, 1051
CseI GACGC 2 cut(s) 660, 930
Csp6I GTAC 4 cut(s) 139, 267, 423, 1229
CspAI ACCGGT 1 cut(s) 263
CspCI CAANNNNNGTGG 2 cut(s) 814, 849
CviAII CATG 5 cut(s) 107, 691, 889, 916, 1037
CviQI GTAC 4 cut(s) 139, 267, 423, 1229
DdeI CTNAG 8 cut(s) 64, 145, 451, 484, 680, 948, 999, 1109
DpnI GATC 4 cut(s) 685, 1028, 1107, 1204
DpnII GATC 4 cut(s) 683, 1026, 1105, 1202
EaeI YGGCCR 3 cut(s) 546, 885, 1072
Eam1104I CTCTTC 1 cut(s) 382
EarI CTCTTC 1 cut(s) 382
Ecl136II GAGCTC 1 cut(s) 450
Eco130I CCWWGG 3 cut(s) 13, 888, 1098
Eco147I AGGCCT 1 cut(s) 1069
Eco24I GRGCYC 2 cut(s) 452, 1090
Eco31I GGTCTC 3 cut(s) 36, 384, 683
Eco47I GGWCC 3 cut(s) 17, 497, 1051
Eco53kI GAGCTC 1 cut(s) 450
Eco57I CTGAAG 5 cut(s) 158, 402, 761, 834, 1128
Eco88I CYCGRG 1 cut(s) 552
Eco91I GGTNACC 1 cut(s) 716
EcoICRI GAGCTC 1 cut(s) 450
EcoO109I RGGNCCY 2 cut(s) 17, 497
EcoO65I GGTNACC 1 cut(s) 716
EcoRII CCWGG 1 cut(s) 1069
EcoT14I CCWWGG 3 cut(s) 13, 888, 1098
EcoT38I GRGCYC 2 cut(s) 452, 1090
ErhI CCWWGG 3 cut(s) 13, 888, 1098
FaeI CATG 5 cut(s) 110, 694, 892, 919, 1040
FaiI YATR 6 cut(s) 108, 692, 731, 890, 917, 1038
FaqI GGGAC 1 cut(s) 766
FatI CATG 5 cut(s) 106, 690, 888, 915, 1036
FblI GTMKAC 1 cut(s) 944
Fnu4HI GCNGC 3 cut(s) 473, 770, 1258
FokI GGATG 4 cut(s) 712, 922, 983, 1203
FriOI GRGCYC 2 cut(s) 452, 1090
Fsp4HI GCNGC 3 cut(s) 473, 770, 1258
GlaI GCGC 2 cut(s) 569, 641
GluI GCNGC 3 cut(s) 473, 770, 1258
HaeIII GGCC 5 cut(s) 277, 548, 887, 1069, 1074
HapII CCGG 4 cut(s) 264, 371, 420, 545
HgaI GACGC 2 cut(s) 660, 930
HhaI GCGC 2 cut(s) 570, 642
Hin1I GRCGYC 1 cut(s) 652
Hin1II CATG 5 cut(s) 110, 694, 892, 919, 1040
Hin6I GCGC 2 cut(s) 568, 640
HinP1I GCGC 2 cut(s) 568, 640
HincII GTYRAC 1 cut(s) 835
HindII GTYRAC 1 cut(s) 835
HindIII AAGCTT 1 cut(s) 229
HinfI GANTC 3 cut(s) 75, 936, 978
HpaII CCGG 4 cut(s) 264, 371, 420, 545
HphI GGTGA 8 cut(s) 70, 360, 389, 517, 728, 814, 861, 1093
Hpy166II GTNNAC 4 cut(s) 525, 835, 945, 1042
Hpy188I TCNGA 6 cut(s) 177, 382, 454, 683, 1000, 1147
Hpy188III TCNNGA 3 cut(s) 344, 428, 1177
Hpy8I GTNNAC 4 cut(s) 525, 835, 945, 1042
HpyAV CCTTC 8 cut(s) 377, 708, 751, 785, 809, 909, 947, 1042
HpyCH4III ACNGT 5 cut(s) 138, 243, 360, 1024, 1120
HpyCH4V TGCA 8 cut(s) 58, 459, 472, 514, 743, 933, 1007, 1126
HpyF10VI GCNNNNNNNGC 2 cut(s) 456, 1094
HpyF3I CTNAG 8 cut(s) 64, 145, 451, 484, 680, 948, 999, 1109
Hsp92I GRCGYC 1 cut(s) 652
Hsp92II CATG 5 cut(s) 110, 694, 892, 919, 1040
HspAI GCGC 2 cut(s) 568, 640
Kzo9I GATC 4 cut(s) 683, 1026, 1105, 1202
LmnI GCTCC 2 cut(s) 15, 766
Lsp1109I GCAGC 2 cut(s) 484, 781
LweI GCATC 2 cut(s) 168, 734
MaeIII GTNAC 4 cut(s) 337, 716, 979, 1018
MalI GATC 4 cut(s) 685, 1028, 1107, 1204
MboI GATC 4 cut(s) 683, 1026, 1105, 1202
MflI RGATCY 2 cut(s) 683, 1105
MhlI GDGCHC 2 cut(s) 452, 1090
MlsI TGGCCA 1 cut(s) 1074
MluCI AATT 2 cut(s) 306, 761
MluNI TGGCCA 1 cut(s) 1074
MlyI GAGTC 1 cut(s) 987
Mox20I TGGCCA 1 cut(s) 1074
MscI TGGCCA 1 cut(s) 1074
MseI TTAA 1 cut(s) 24
MslI CAYNNNNRTG 2 cut(s) 672, 893
Msp20I TGGCCA 1 cut(s) 1074
MspA1I CMGCKG 1 cut(s) 1260
MspI CCGG 4 cut(s) 264, 371, 420, 545
MspR9I CCNGG 1 cut(s) 1071
Mva1269I GAATGC 1 cut(s) 168
MvaI CCWGG 1 cut(s) 1071
MvnI CGCG 1 cut(s) 941
MwoI GCNNNNNNNGC 2 cut(s) 456, 1094
NcoI CCATGG 1 cut(s) 888
NdeII GATC 4 cut(s) 683, 1026, 1105, 1202
NlaIII CATG 5 cut(s) 110, 694, 892, 919, 1040
NlaIV GGNNCC 3 cut(s) 11, 19, 498
NmuCI GTSAC 3 cut(s) 716, 979, 1018
NspV TTCGAA 1 cut(s) 153
PceI AGGCCT 1 cut(s) 1069
PctI GAATGC 1 cut(s) 168
PfeI GAWTC 2 cut(s) 75, 936
PinAI ACCGGT 1 cut(s) 263
PkrI GCNGC 3 cut(s) 474, 771, 1259
PleI GAGTC 1 cut(s) 986
PpsI GAGTC 1 cut(s) 986
PpuMI RGGWCCY 2 cut(s) 17, 497
PshBI ATTAAT 1 cut(s) 24
Psp124BI GAGCTC 1 cut(s) 452
Psp5II RGGWCCY 2 cut(s) 17, 497
Psp6I CCWGG 1 cut(s) 1069
PspEI GGTNACC 1 cut(s) 716
PspGI CCWGG 1 cut(s) 1069
PspN4I GGNNCC 3 cut(s) 11, 19, 498
PspPI GGNCC 3 cut(s) 17, 497, 1051
PspPPI RGGWCCY 2 cut(s) 17, 497
PstI CTGCAG 1 cut(s) 516
PstNI CAGNNNCTG 1 cut(s) 511
PsuI RGATCY 2 cut(s) 683, 1105
PvuII CAGCTG 1 cut(s) 1260
RsaI GTAC 4 cut(s) 140, 268, 424, 1230
RsaNI GTAC 4 cut(s) 139, 267, 423, 1229
RseI CAYNNNNRTG 2 cut(s) 672, 893
SacI GAGCTC 1 cut(s) 452
SaqAI TTAA 1 cut(s) 24
SatI GCNGC 3 cut(s) 473, 770, 1258
Sau3AI GATC 4 cut(s) 683, 1026, 1105, 1202
Sau96I GGNCC 3 cut(s) 17, 497, 1051
SchI GAGTC 1 cut(s) 987
ScrFI CCNGG 1 cut(s) 1071
SduI GDGCHC 2 cut(s) 452, 1090
SfaNI GCATC 2 cut(s) 168, 734
SfcI CTRYAG 1 cut(s) 512
SfuI TTCGAA 1 cut(s) 153
SinI GGWCC 3 cut(s) 17, 497, 1051
SmiMI CAYNNNNRTG 2 cut(s) 672, 893
SmlI CTYRAG 6 cut(s) 112, 317, 326, 342, 428, 1175
SmoI CTYRAG 6 cut(s) 112, 317, 326, 342, 428, 1175
Sse9I AATT 2 cut(s) 306, 761
SseBI AGGCCT 1 cut(s) 1069
SsiI CCGC 1 cut(s) 646
SspI AATATT 1 cut(s) 1239
SstI GAGCTC 1 cut(s) 452
StuI AGGCCT 1 cut(s) 1069
StyD4I CCNGG 1 cut(s) 1069
StyI CCWWGG 3 cut(s) 13, 888, 1098
TaaI ACNGT 5 cut(s) 138, 243, 360, 1024, 1120
TaqI TCGA 1 cut(s) 153
TasI AATT 2 cut(s) 306, 761
TatI WGTACW 1 cut(s) 1228
TfiI GAWTC 2 cut(s) 75, 936
Tru1I TTAA 1 cut(s) 24
Tru9I TTAA 1 cut(s) 24
TscAI CASTG 5 cut(s) 65, 141, 246, 1029, 1061
TseFI GTSAC 3 cut(s) 716, 979, 1018
TseI GCWGC 3 cut(s) 472, 769, 1257
Tsp45I GTSAC 3 cut(s) 716, 979, 1018
TspDTI ATGAA 5 cut(s) 674, 818, 867, 904, 1237
TspRI CASTG 5 cut(s) 65, 141, 246, 1029, 1061
VpaK11BI GGWCC 3 cut(s) 17, 497, 1051
VspI ATTAAT 1 cut(s) 24
XapI RAATTY 1 cut(s) 306
XmiI GTMKAC 1 cut(s) 944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.