RLG00000030365

Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
60124158 .. 60127944
3787 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030365

Sequence Viewer

Length: 1677 bp
ATGGAATGTGGAATGTGGATACTTGTTCAACTTGTTGCTCTGTTACTGCCCAGCATGAATGTGGGTGTTTTGGGGAAGACAAGAGTGAGTGGCTCTGTCACAGTCGTCTCAGCAGCCTTCCGCCTCCTTTTTCTTCTTCTTCTTCTCCTCTCTTTGGTTCTGGATTTTGTCATTGCTGCCCAAAAGTGCTTCACCATGAACAACCTCTCAGCCTTTGCAGCCCTTGATGCCAACCCACTCTCCAAAACATGCTATTTGGGCACCCACCACAACAGGTTTAATCTCCTCCAACGCCCCAGATATGTCGTTGTATGCTCAGTGAAGCCCTCAGTTGCCCCCCCCTCATTGCTAAGTGTGACTGGGTCCCCCATCAGTGGGCCTAATCGAATTGAGTCTCTAACCCAGGTCTCAGGAGTTTTGGGGTGCCAGTGGGGTGATGAAGGTAAAGGTAAACTCGTTGACATCTTGGCCGAGCACTTTGACATTGTTGCTCGTTGTCAGGGAGGAGCTAATGCTGGACACACCATTTACAATGCAGAAGGAAAGAAGTTTGCACTTCATCTTGTTCCCTCAGGTATTCTCAATGAGGATACTCTCTGTGTTATAGGGAATGGTGTTGTGGTGCATCTTCCGGGCCTCTTTAAAGAGGTTGATGGCCTCGAATCTAATGGAGTGTCTTGCAAGGGAAGGATATTGGTCTCTGATCGTGCTCACCTCTTATTTGATTTCCACCAAGCAGTGGATGGGCTTCGAGAATCTGAGCTTGCTAAATCTTTCATTGGTACTACCAAGAGAGGCATTGGACCTTGTTACTCTAGCAAGGTTATCCGGAATGGCATTCGAGTTGGTGACTTGAGGCACATGGATACTTTACCTCAGAAGCTAGATCTTCTGTTGTCAGATGCTGCATCAAGATTCAAAGGTTTTGAGTATGGCCCCCAGATGCTTAGAGAAGAAGTAGAAAAGTACAAGAGATTTGCTGAGAGATTGGAACCCTTCATTGCTGATACTGTACTTGTTGTGAATGAAGCCATCTCTGAGAAGAAAAAGATTTTAGTTGAAGGGGGTCAGGCAACAATGTTGGATATTGACTTTGGAACGTACCCCTTTGTCACTTCCTCAAGTCCTTCAGCTGGTGGGATTTGTACCGGTCTTGGTATTGCTCCCAGAGTTTTAGGTGATCTCGTTGGAGTGGTGAAAGCATACACTACAAGAGTTGGTTCTGGTCCTTTCCCCACAGAAAACTTAGGTAAAGAGGGTGACCTTCTTAGGTTGCAAGGTCAGGAGTTTGGCACAACTACTGGTCGCCCTCGTCGCTGTGGTTGGCTTGATATAGTAGCACTGAAATACTGTTGCCAGATTAATGGCTTTTCTTCTCTCAATCTCACCAAACTAGATGTTTTGTCTGATTTTCCCGCAATTCAGTTGGGTGTCGCCTACAAAACTAGTGACGGCACACCAATCAAATCATTCCCTGGAGATCTTCGCCTTCTTGAGCAAGTGAAGGTGAAATATGAAGTATTGCCCGGATGGAATACTGACATCTCTAATGTAAGGAGCTACTCTGAACTTCCAAAGGCTGCACGTCAGTACGTGGAAAGAATAGAAGAACTTGTTGGTGTACCTATCCATTACATTGGTGTCGGGCCTGGACGTGATGCCCTCATTTACAAATAG

Protein Analysis

559

Amino Acids

60.53

Weight (kDa)

8.45

Isoelectric Point (pI)

28.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adenylsucc_synt PF00709 139 - 556 2.4e-176 Adenylosuccinate synthetase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 260, 423
AccB7I CCANNNNNTGG 1 cut(s) 739
AccIII TCCGGA 1 cut(s) 828
AciI CCGC 2 cut(s) 121, 1416
AcoI YGGCCR 1 cut(s) 468
AcuI CTGAAG 1 cut(s) 1113
AfaI GTAC 7 cut(s) 784, 968, 1014, 1103, 1147, 1592, 1623
AfiI CCNNNNNNNGG 5 cut(s) 154, 374, 375, 739, 1133
AgeI ACCGGT 1 cut(s) 1148
AgsI TTSAA 3 cut(s) 29, 919, 1061
AhlI ACTAGT 1 cut(s) 1445
AjiI CACGTC 2 cut(s) 1586, 1655
AjnI CCWGG 3 cut(s) 402, 1474, 1648
AjuI GAANNNNNNNTTGG 2 cut(s) 1599, 1631
AluBI AGCT 5 cut(s) 509, 763, 883, 1133, 1560
AluI AGCT 5 cut(s) 509, 763, 883, 1133, 1560
Alw21I GWGCWC 2 cut(s) 477, 712
Alw26I GTCTC 4 cut(s) 112, 399, 412, 703
AlwNI CAGNNNCTG 1 cut(s) 905
Aor13HI TCCGGA 1 cut(s) 828
AoxI GGCC 6 cut(s) 377, 468, 634, 655, 934, 1646
ApeKI GCWGC 5 cut(s) 113, 176, 218, 905, 1580
AseI ATTAAT 1 cut(s) 1362
AsiGI ACCGGT 1 cut(s) 1148
AspS9I GGNCC 7 cut(s) 363, 377, 634, 803, 935, 1226, 1646
AsuC2I CCSGG 2 cut(s) 633, 1527
AsuHPI GGTGA 9 cut(s) 184, 446, 704, 860, 1190, 1207, 1271, 1378, 1519
AvaII GGWCC 3 cut(s) 363, 803, 1226
AxyI CCTNAGG 1 cut(s) 571
BaeGI GKGCMC 1 cut(s) 263
BanI GGYRCC 2 cut(s) 260, 423
BbsI GAAGAC 1 cut(s) 83
Bbv12I GWGCWC 2 cut(s) 477, 712
BbvI GCAGC 5 cut(s) 125, 163, 230, 892, 1567
BccI CCATC 5 cut(s) 377, 647, 737, 1040, 1524
BceAI ACGGC 1 cut(s) 1468
BciT130I CCWGG 3 cut(s) 404, 1476, 1650
BciVI GTATCC 3 cut(s) 12, 583, 859
BcnI CCSGG 2 cut(s) 633, 1527
BcoDI GTCTC 4 cut(s) 112, 399, 412, 703
BcuI ACTAGT 1 cut(s) 1445
BfaI CTAG 4 cut(s) 816, 884, 1394, 1446
BfuI GTATCC 3 cut(s) 12, 583, 859
BglII AGATCT 2 cut(s) 886, 1480
BisI GCNGC 5 cut(s) 114, 177, 219, 906, 1581
BlsI GCNGC 5 cut(s) 115, 178, 220, 907, 1582
Bme1390I CCNGG 5 cut(s) 404, 633, 1476, 1527, 1650
Bme18I GGWCC 3 cut(s) 363, 803, 1226
BmgBI CACGTC 2 cut(s) 1586, 1655
BmgT120I GGNCC 7 cut(s) 363, 377, 634, 803, 935, 1226, 1646
BmiI GGNNCC 6 cut(s) 262, 364, 365, 425, 937, 993
BmrFI CCNGG 5 cut(s) 404, 633, 1476, 1527, 1650
BmrI ACTGGG 1 cut(s) 369
BmsI GCATC 6 cut(s) 217, 634, 892, 917, 933, 1648
BmuI ACTGGG 1 cut(s) 369
BpiI GAAGAC 1 cut(s) 83
BpmI CTGGAG 1 cut(s) 1497
BpuEI CTTGAG 3 cut(s) 874, 1105, 1514
BpuMI CCSGG 2 cut(s) 633, 1527
BsaAI YACGTR 1 cut(s) 1594
BsaI GGTCTC 2 cut(s) 412, 703
BsaJI CCNNGG 2 cut(s) 402, 1474
BsaWI WCCGGW 2 cut(s) 828, 1148
BsaXI ACNNNNNCTCC 2 cut(s) 224, 254
Bsc4I CCNNNNNNNGG 5 cut(s) 154, 374, 375, 739, 1133
Bse118I RCCGGY 1 cut(s) 1148
Bse1I ACTGG 3 cut(s) 364, 427, 1306
Bse21I CCTNAGG 1 cut(s) 571
Bse3DI GCAATG 3 cut(s) 171, 344, 999
BseAI TCCGGA 1 cut(s) 828
BseBI CCWGG 3 cut(s) 404, 1476, 1650
BseDI CCNNGG 2 cut(s) 402, 1474
BseGI GGATG 2 cut(s) 748, 1535
BseLI CCNNNNNNNGG 5 cut(s) 154, 374, 375, 739, 1133
BseMI GCAATG 3 cut(s) 171, 344, 999
BseNI ACTGG 3 cut(s) 364, 427, 1306
BseRI GAGGAG 3 cut(s) 137, 275, 519
BseSI GKGCMC 1 cut(s) 263
BseXI GCAGC 5 cut(s) 125, 163, 230, 892, 1567
BseYI CCCAGC 1 cut(s) 50
BsgI GTGCAG 1 cut(s) 1566
BshFI GGCC 6 cut(s) 379, 470, 636, 657, 936, 1648
BshNI GGYRCC 2 cut(s) 260, 423
BshTI ACCGGT 1 cut(s) 1148
BsiHKAI GWGCWC 2 cut(s) 477, 712
BsiSI CCGG 4 cut(s) 632, 829, 1149, 1527
BslFI GGGAC 1 cut(s) 349
BslI CCNNNNNNNGG 5 cut(s) 154, 374, 375, 739, 1133
BsmAI GTCTC 4 cut(s) 112, 399, 412, 703
BsmBI CGTCTC 1 cut(s) 112
BsmFI GGGAC 1 cut(s) 349
BsmI GAATGC 1 cut(s) 837
BsnI GGCC 6 cut(s) 379, 470, 636, 657, 936, 1648
Bso31I GGTCTC 2 cut(s) 412, 703
Bsp1286I GDGCHC 3 cut(s) 263, 477, 712
Bsp13I TCCGGA 1 cut(s) 828
Bsp143I GATC 4 cut(s) 703, 886, 1180, 1480
BspACI CCGC 2 cut(s) 121, 1416
BspANI GGCC 6 cut(s) 379, 470, 636, 657, 936, 1648
BspEI TCCGGA 1 cut(s) 828
BspLI GGNNCC 6 cut(s) 262, 364, 365, 425, 937, 993
BspT107I GGYRCC 2 cut(s) 260, 423
BspTNI GGTCTC 2 cut(s) 412, 703
BsrDI GCAATG 3 cut(s) 171, 344, 999
BsrFI RCCGGY 1 cut(s) 1148
BsrI ACTGG 3 cut(s) 364, 427, 1306
BssAI RCCGGY 1 cut(s) 1148
BssECI CCNNGG 2 cut(s) 402, 1474
BssMI GATC 4 cut(s) 703, 886, 1180, 1480
Bst2UI CCWGG 3 cut(s) 404, 1476, 1650
Bst4CI ACNGT 3 cut(s) 103, 1012, 1352
BstBAI YACGTR 1 cut(s) 1594
BstC8I GCNNGC 1 cut(s) 765
BstEII GGTNACC 1 cut(s) 1259
BstF5I GGATG 2 cut(s) 748, 1535
BstKTI GATC 4 cut(s) 706, 889, 1183, 1483
BstMAI GTCTC 4 cut(s) 112, 399, 412, 703
BstMBI GATC 4 cut(s) 703, 886, 1180, 1480
BstMWI GCNNNNNNNGC 4 cut(s) 218, 227, 258, 1314
BstNI CCWGG 3 cut(s) 404, 1476, 1650
BstNSI RCATGY 1 cut(s) 252
BstPI GGTNACC 1 cut(s) 1259
BstSCI CCNGG 5 cut(s) 402, 631, 1474, 1525, 1648
BstSLI GKGCMC 1 cut(s) 263
BstV1I GCAGC 5 cut(s) 125, 163, 230, 892, 1567
BstV2I GAAGAC 1 cut(s) 83
BstX2I RGATCY 2 cut(s) 886, 1480
BstXI CCANNNNNNTGG 2 cut(s) 1364, 1637
BstYI RGATCY 2 cut(s) 886, 1480
Bsu36I CCTNAGG 1 cut(s) 571
BsuI GTATCC 3 cut(s) 12, 583, 859
BsuRI GGCC 6 cut(s) 379, 470, 636, 657, 936, 1648
BtrI CACGTC 2 cut(s) 1586, 1655
BtsCI GGATG 2 cut(s) 748, 1535
BtsI GCAGTG 1 cut(s) 744
BtsIMutI CAGTG 5 cut(s) 324, 379, 434, 744, 1340
Cac8I GCNNGC 1 cut(s) 765
CaiI CAGNNNCTG 1 cut(s) 905
Cfr10I RCCGGY 1 cut(s) 1148
Cfr13I GGNCC 7 cut(s) 363, 377, 634, 803, 935, 1226, 1646
Csp6I GTAC 7 cut(s) 783, 967, 1013, 1102, 1146, 1591, 1622
CspAI ACCGGT 1 cut(s) 1148
CviAII CATG 4 cut(s) 55, 196, 249, 862
CviQI GTAC 7 cut(s) 783, 967, 1013, 1102, 1146, 1591, 1622
DpnI GATC 4 cut(s) 705, 888, 1182, 1482
DpnII GATC 4 cut(s) 703, 886, 1180, 1480
DraI TTTAAA 1 cut(s) 643
EaeI YGGCCR 1 cut(s) 468
EciI GGCGGA 1 cut(s) 110
Eco31I GGTCTC 2 cut(s) 412, 703
Eco47I GGWCC 3 cut(s) 363, 803, 1226
Eco57I CTGAAG 1 cut(s) 1113
Eco81I CCTNAGG 1 cut(s) 571
Eco91I GGTNACC 1 cut(s) 1259
EcoO109I RGGNCCY 1 cut(s) 363
EcoO65I GGTNACC 1 cut(s) 1259
EcoRII CCWGG 3 cut(s) 402, 1474, 1648
Esp3I CGTCTC 1 cut(s) 112
FaeI CATG 4 cut(s) 58, 199, 252, 865
FaqI GGGAC 1 cut(s) 349
FatI CATG 4 cut(s) 54, 195, 248, 861
FauI CCCGC 1 cut(s) 1423
Fnu4HI GCNGC 5 cut(s) 114, 177, 219, 906, 1581
FokI GGATG 2 cut(s) 755, 1542
Fsp4HI GCNGC 5 cut(s) 114, 177, 219, 906, 1581
FspBI CTAG 4 cut(s) 816, 884, 1394, 1446
GluI GCNGC 5 cut(s) 114, 177, 219, 906, 1581
GsaI CCCAGC 1 cut(s) 54
GsuI CTGGAG 1 cut(s) 1497
HaeIII GGCC 6 cut(s) 379, 470, 636, 657, 936, 1648
HapII CCGG 4 cut(s) 632, 829, 1149, 1527
Hin1II CATG 4 cut(s) 58, 199, 252, 865
HincII GTYRAC 1 cut(s) 460
HindII GTYRAC 1 cut(s) 460
HinfI GANTC 4 cut(s) 392, 662, 755, 915
HpaII CCGG 4 cut(s) 632, 829, 1149, 1527
HphI GGTGA 9 cut(s) 184, 446, 704, 860, 1190, 1207, 1271, 1378, 1519
Hpy166II GTNNAC 3 cut(s) 452, 460, 1622
Hpy188I TCNGA 7 cut(s) 703, 760, 879, 901, 1039, 1408, 1567
Hpy188III TCNNGA 7 cut(s) 161, 411, 752, 829, 912, 1283, 1493
Hpy8I GTNNAC 3 cut(s) 452, 460, 1622
Hpy99I CGWCG 1 cut(s) 1317
HpyCH4III ACNGT 3 cut(s) 103, 1012, 1352
HpyCH4IV ACGT 4 cut(s) 1100, 1585, 1593, 1654
HpyCH4V TGCA 8 cut(s) 218, 536, 554, 625, 681, 908, 1276, 1583
HpyF10VI GCNNNNNNNGC 4 cut(s) 218, 227, 258, 1314
HpySE526I ACGT 4 cut(s) 1100, 1585, 1593, 1654
Hsp92II CATG 4 cut(s) 58, 199, 252, 865
KflI GGGWCCC 1 cut(s) 363
Kpn2I TCCGGA 1 cut(s) 828
Kzo9I GATC 4 cut(s) 703, 886, 1180, 1480
LmnI GCTCC 3 cut(s) 506, 1168, 1557
Lsp1109I GCAGC 5 cut(s) 125, 163, 230, 892, 1567
LweI GCATC 6 cut(s) 217, 634, 892, 917, 933, 1648
MaeI CTAG 4 cut(s) 816, 884, 1394, 1446
MaeII ACGT 4 cut(s) 1100, 1585, 1593, 1654
MaeIII GTNAC 8 cut(s) 42, 97, 355, 809, 848, 1111, 1259, 1448
MalI GATC 4 cut(s) 705, 888, 1182, 1482
MboI GATC 4 cut(s) 703, 886, 1180, 1480
MflI RGATCY 2 cut(s) 886, 1480
MhlI GDGCHC 3 cut(s) 263, 477, 712
MluCI AATT 2 cut(s) 387, 1419
MlyI GAGTC 1 cut(s) 401
MmeI TCCRAC 3 cut(s) 313, 1062, 1168
MroI TCCGGA 1 cut(s) 828
MseI TTAA 3 cut(s) 279, 642, 1362
MslI CAYNNNNRTG 1 cut(s) 59
MspA1I CMGCKG 1 cut(s) 1133
MspI CCGG 4 cut(s) 632, 829, 1149, 1527
MspR9I CCNGG 5 cut(s) 404, 633, 1476, 1527, 1650
Mva1269I GAATGC 1 cut(s) 837
MvaI CCWGG 3 cut(s) 404, 1476, 1650
MwoI GCNNNNNNNGC 4 cut(s) 218, 227, 258, 1314
NciI CCSGG 2 cut(s) 633, 1527
NdeII GATC 4 cut(s) 703, 886, 1180, 1480
NlaIII CATG 4 cut(s) 58, 199, 252, 865
NlaIV GGNNCC 6 cut(s) 262, 364, 365, 425, 937, 993
NmeAIII GCCGAG 1 cut(s) 496
NmuCI GTSAC 6 cut(s) 97, 355, 848, 1111, 1259, 1448
NspI RCATGY 1 cut(s) 252
PctI GAATGC 1 cut(s) 837
PfeI GAWTC 3 cut(s) 662, 755, 915
PflFI GACNNNGTC 1 cut(s) 361
PflMI CCANNNNNTGG 1 cut(s) 739
PinAI ACCGGT 1 cut(s) 1148
PkrI GCNGC 5 cut(s) 115, 178, 220, 907, 1582
PleI GAGTC 1 cut(s) 400
PpsI GAGTC 1 cut(s) 400
Ppu21I YACGTR 1 cut(s) 1594
PpuMI RGGWCCY 1 cut(s) 363
PshBI ATTAAT 1 cut(s) 1362
Psp5II RGGWCCY 1 cut(s) 363
Psp6I CCWGG 3 cut(s) 402, 1474, 1648
PspEI GGTNACC 1 cut(s) 1259
PspFI CCCAGC 1 cut(s) 50
PspGI CCWGG 3 cut(s) 402, 1474, 1648
PspN4I GGNNCC 6 cut(s) 262, 364, 365, 425, 937, 993
PspPI GGNCC 7 cut(s) 363, 377, 634, 803, 935, 1226, 1646
PspPPI RGGWCCY 1 cut(s) 363
PstNI CAGNNNCTG 1 cut(s) 905
PsuI RGATCY 2 cut(s) 886, 1480
PsyI GACNNNGTC 1 cut(s) 361
PvuII CAGCTG 1 cut(s) 1133
RsaI GTAC 7 cut(s) 784, 968, 1014, 1103, 1147, 1592, 1623
RsaNI GTAC 7 cut(s) 783, 967, 1013, 1102, 1146, 1591, 1622
RseI CAYNNNNRTG 1 cut(s) 59
SaqAI TTAA 3 cut(s) 279, 642, 1362
SatI GCNGC 5 cut(s) 114, 177, 219, 906, 1581
Sau3AI GATC 4 cut(s) 703, 886, 1180, 1480
Sau96I GGNCC 7 cut(s) 363, 377, 634, 803, 935, 1226, 1646
SchI GAGTC 1 cut(s) 401
ScrFI CCNGG 5 cut(s) 404, 633, 1476, 1527, 1650
SduI GDGCHC 3 cut(s) 263, 477, 712
SfaNI GCATC 6 cut(s) 217, 634, 892, 917, 933, 1648
SinI GGWCC 3 cut(s) 363, 803, 1226
SmiMI CAYNNNNRTG 1 cut(s) 59
SmlI CTYRAG 3 cut(s) 853, 1120, 1493
SmoI CTYRAG 3 cut(s) 853, 1120, 1493
SpeI ACTAGT 1 cut(s) 1445
Sse9I AATT 2 cut(s) 387, 1419
SsiI CCGC 2 cut(s) 121, 1416
SspMI CTAG 4 cut(s) 816, 884, 1394, 1446
StyD4I CCNGG 5 cut(s) 402, 631, 1474, 1525, 1648
TaaI ACNGT 3 cut(s) 103, 1012, 1352
TaiI ACGT 4 cut(s) 1103, 1588, 1596, 1657
TaqI TCGA 4 cut(s) 385, 660, 751, 841
TasI AATT 2 cut(s) 387, 1419
TatI WGTACW 2 cut(s) 966, 1012
TfiI GAWTC 3 cut(s) 662, 755, 915
Tru1I TTAA 3 cut(s) 279, 642, 1362
Tru9I TTAA 3 cut(s) 279, 642, 1362
TscAI CASTG 5 cut(s) 324, 379, 434, 744, 1347
TseFI GTSAC 6 cut(s) 97, 355, 848, 1111, 1259, 1448
TseI GCWGC 5 cut(s) 113, 176, 218, 905, 1580
Tsp45I GTSAC 6 cut(s) 97, 355, 848, 1111, 1259, 1448
TspDTI ATGAA 8 cut(s) 71, 212, 453, 548, 766, 988, 1041, 1530
TspRI CASTG 5 cut(s) 324, 379, 434, 744, 1347
Tth111I GACNNNGTC 1 cut(s) 361
Van91I CCANNNNNTGG 1 cut(s) 739
VpaK11BI GGWCC 3 cut(s) 363, 803, 1226
VspI ATTAAT 1 cut(s) 1362
XceI RCATGY 1 cut(s) 252
XcmI CCANNNNNNNNNTGG 2 cut(s) 58, 740
XspI CTAG 4 cut(s) 816, 884, 1394, 1446
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.