Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004963

Physical Location & Seq

Genomic Coordinates Reverse (-)

6566625 .. 6567740

Gene Structure 1116 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G10630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1005 bp

ATGGGTTGCGTCTCATCTAACCTCCTAAACCACGACGAAGACTTCTCTCAAATCGGCGGTGGAAGCTCCGCCTTCGGTCACCACATCGTCAAACTAACCTCCACCACTTATGGTCTTCTCACACTCGATCCTCCTCCTCCTCCTTCTCCTCCTATGACGCCGCCGGAGAAATTCACAGTCGATACAAAATCTAAGTCAATATGGTCTGAGCCAAGGGTGATAAAGTCGGAACCGGAGATTATTAACTCTTGGGAGTTAATGTCTGGTCTCGACGGAGAGAGTTTCCGATTCACGCCACTTCCTAAGACTCCGGTGAAGTATAAAGTGTTTGGTGGAGAGAACAAAGAGAATTCAGATCCTAGTCGGAGAAACCCTAGAAAAAACTTGAACGACGAGGTTTTGAAACCGCTAGATCTGAACAGAGAGGATTCGGATTCTAATTCGAGAAGCCCTAGAAAATCGTTTAAACCGTTAGATTTGAAATTGGATGAGAAATTTGAGAGGATTTGTCCACCAGGAGGAGAGAATCGTGTGGTGATGTACACGACGTCGTTGCGAGGTGTTCGTCAAACGTTTGAGGCGTGTAACGCTGTGAGAGCGGCGGTGGAGAGTTTTGGTGTTGTGGTTTGCGAGAGAGATGTGTCGATGGATAGAAGGTTTAGAGAAGAGCTTGTGAGTCTAATGGCGAAGAGAGTTGGGGATGAGGGAGTGGCTGCATTGCCGCCTCGGGTTTTTGTGAAGGGAAGGTACATTGGTGGAGGAGAGGAAGTGTTGAGACTAGTTGAGGAAGGTTCTTTCGGAGAGCTGATCAGCGGGATTCCGAGAAAGAAAGCGGGAGGATGCGAGAGCGGCGCGTGTGATGGTTGCGGCGGTTTGTTTTTCTTGCCGTGTTTTCGGTGTAATGGAAGCTGTAAGATGGTGAAAGGATGGGGTAGTGCTTCGGTGGTTGTGAGATGTAATGAGTGTAATGAGAATGGTCTTGTTCCATGTCCTATTTGCAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glutaredoxin

Protein Analysis

334

Amino Acids

36.59

Weight (kDa)

7.42

Isoelectric Point (pI)

47.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glutaredoxin	PF00462	178 - 251	3.1e-08	Glutaredoxin
GRXCR1-2_C	PF23733	286 - 334	2.3e-15	GRXCR1/2, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004963)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32760 AT4G10630
fragaria_vesca	FvH4_5g10700
malus_domestica	MD06G1121200.v1.1 MD09G1197100.v1.1 MD14G1137800.v1.1
prunus_persica	Prupe.5G131800_v2.0.a1
pyrus_communis	pycom06g11250 pycom14g11300
rosa_chinensis	RchiOBHm_Chr1g0342161 RchiOBHm_Chr7g0187441
rosa_laevigata	RLG00000001600 RLG00000004781 RLG00000009467
rosa_multiflora	Rmu_sc0001230.1_g000015 Rmu_sc0003363.1_g000014 Rmu_sc0009146.1_g000005
rosa_roxburghii	Rroxscaffold_3G00267420
rosa_rugosa	Rorug06G0355300 Rorug06G0481600
rosa_samantha	Rh1CG026900 Rh5DG426300 Rh7AG086100 Rh7BG087600 Rh7CG087000 Rh7DG088600 Rh7DG307400 Rh7DG445500
rosa_wichuraiana	Rw2G033920 Rw7G007600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	551
AccBSI	CCGCTC	2 cut(s)	599, 849
AccII	CGCG	1 cut(s)	854
AclI	AACGTT	1 cut(s)	572
AclWI	GGATC	2 cut(s)	122, 350
AcsI	RAATTY	3 cut(s)	170, 349, 494
AcyI	GRCGYC	2 cut(s)	158, 548
AfaI	GTAC	2 cut(s)	542, 749
AfiI	CCNNNNNNNGG	1 cut(s)	518
AgsI	TTSAA	3 cut(s)	388, 403, 481
AhlI	ACTAGT	1 cut(s)	778
AjnI	CCWGG	1 cut(s)	514
AluBI	AGCT	4 cut(s)	66, 670, 805, 909
AluI	AGCT	4 cut(s)	66, 670, 805, 909
Alw26I	GTCTC	3 cut(s)	16, 272, 769
AlwI	GGATC	2 cut(s)	122, 350
Ama87I	CYCGRG	1 cut(s)	726
ApeKI	GCWGC	1 cut(s)	713
ApoI	RAATTY	3 cut(s)	170, 349, 494
ArsI	GACNNNNNNTTYG	2 cut(s)	179, 211
AspLEI	GCGC	1 cut(s)	854
AsuHPI	GGTGA	5 cut(s)	71, 229, 325, 547, 931
AvaI	CYCGRG	1 cut(s)	726
BaeI	ACNNNNGTAYC	2 cut(s)	739, 772
BarI	GAAGNNNNNNTAC	2 cut(s)	731, 763
BbsI	GAAGAC	2 cut(s)	45, 107
BbvI	GCAGC	1 cut(s)	700
BccI	CCATC	4 cut(s)	640, 854, 910, 921
BceAI	ACGGC	1 cut(s)	871
BcgI	CGANNNNNNTGC	2 cut(s)	535, 569
BciT130I	CCWGG	1 cut(s)	516
BclI	TGATCA	1 cut(s)	807
BcoDI	GTCTC	3 cut(s)	16, 272, 769
BcuI	ACTAGT	1 cut(s)	778
BfaI	CTAG	5 cut(s)	360, 375, 410, 453, 779
BglII	AGATCT	1 cut(s)	412
BisI	GCNGC	6 cut(s)	161, 600, 714, 722, 850, 868
BlsI	GCNGC	6 cut(s)	162, 601, 715, 723, 851, 869
Bme1390I	CCNGG	1 cut(s)	516
BmeT110I	CYCGRG	1 cut(s)	726
BmiI	GGNNCC	1 cut(s)	231
BmrFI	CCNGG	1 cut(s)	516
BmsI	GCATC	1 cut(s)	830
BpiI	GAAGAC	2 cut(s)	45, 107
BsaHI	GRCGYC	2 cut(s)	158, 548
BsaI	GGTCTC	1 cut(s)	272
BsaJI	CCNNGG	2 cut(s)	212, 725
BsaWI	WCCGGW	2 cut(s)	232, 310
BsaXI	ACNNNNNCTCC	4 cut(s)	245, 275, 753, 783
Bsc4I	CCNNNNNNNGG	1 cut(s)	518
Bse3DI	GCAATG	1 cut(s)	716
BseBI	CCWGG	1 cut(s)	516
BseDI	CCNNGG	2 cut(s)	212, 725
BseGI	GGATG	4 cut(s)	493, 706, 845, 932
BseLI	CCNNNNNNNGG	1 cut(s)	518
BseMI	GCAATG	1 cut(s)	716
BseMII	CTCAG	1 cut(s)	198
BseRI	GAGGAG	6 cut(s)	123, 126, 129, 138, 534, 774
BseXI	GCAGC	1 cut(s)	700
Bsh1236I	CGCG	1 cut(s)	854
BsiHKCI	CYCGRG	1 cut(s)	726
BsiSI	CCGG	3 cut(s)	164, 233, 311
BslI	CCNNNNNNNGG	1 cut(s)	518
BsmAI	GTCTC	3 cut(s)	16, 272, 769
BsmBI	CGTCTC	1 cut(s)	16
Bso31I	GGTCTC	1 cut(s)	272
BsoBI	CYCGRG	1 cut(s)	726
Bsp1407I	TGTACA	1 cut(s)	540
Bsp143I	GATC	4 cut(s)	127, 355, 412, 807
BspCNI	CTCAG	1 cut(s)	199
BspFNI	CGCG	1 cut(s)	854
BspLI	GGNNCC	1 cut(s)	231
BspPI	GGATC	2 cut(s)	122, 350
BspQI	GCTCTTC	1 cut(s)	660
BspTNI	GGTCTC	1 cut(s)	272
BsrBI	CCGCTC	2 cut(s)	599, 849
BsrDI	GCAATG	1 cut(s)	716
BsrGI	TGTACA	1 cut(s)	540
BssECI	CCNNGG	2 cut(s)	212, 725
BssMI	GATC	4 cut(s)	127, 355, 412, 807
BssNI	GRCGYC	2 cut(s)	158, 548
BssT1I	CCWWGG	1 cut(s)	212
Bst2UI	CCWGG	1 cut(s)	516
Bst4CI	ACNGT	2 cut(s)	178, 471
Bst6I	CTCTTC	2 cut(s)	660, 683
BstACI	GRCGYC	2 cut(s)	158, 548
BstAUI	TGTACA	1 cut(s)	540
BstDEI	CTNAG	3 cut(s)	192, 207, 303
BstEII	GGTNACC	1 cut(s)	77
BstF5I	GGATG	4 cut(s)	493, 706, 845, 932
BstFNI	CGCG	1 cut(s)	854
BstHHI	GCGC	1 cut(s)	854
BstKTI	GATC	4 cut(s)	130, 358, 415, 810
BstMAI	GTCTC	3 cut(s)	16, 272, 769
BstMBI	GATC	4 cut(s)	127, 355, 412, 807
BstMWI	GCNNNNNNNGC	4 cut(s)	63, 587, 596, 849
BstNI	CCWGG	1 cut(s)	516
BstPI	GGTNACC	1 cut(s)	77
BstSCI	CCNGG	1 cut(s)	514
BstUI	CGCG	1 cut(s)	854
BstV1I	GCAGC	1 cut(s)	700
BstV2I	GAAGAC	2 cut(s)	45, 107
BstX2I	RGATCY	2 cut(s)	355, 412
BstYI	RGATCY	2 cut(s)	355, 412
BtsCI	GGATG	4 cut(s)	493, 706, 845, 932
CfoI	GCGC	1 cut(s)	854
CseI	GACGC	1 cut(s)	166
Csp6I	GTAC	2 cut(s)	541, 748
CviAII	CATG	1 cut(s)	987
CviJI	RGCY	7 cut(s)	66, 211, 450, 670, 713, 805, 909
CviKI_1	RGCY	7 cut(s)	66, 211, 450, 670, 713, 805, 909
CviQI	GTAC	2 cut(s)	541, 748
DdeI	CTNAG	3 cut(s)	192, 207, 303
DpnI	GATC	4 cut(s)	129, 357, 414, 809
DpnII	GATC	4 cut(s)	127, 355, 412, 807
DraI	TTTAAA	1 cut(s)	466
Eam1104I	CTCTTC	2 cut(s)	660, 683
EarI	CTCTTC	2 cut(s)	660, 683
EciI	GGCGGA	1 cut(s)	58
Eco130I	CCWWGG	1 cut(s)	212
Eco31I	GGTCTC	1 cut(s)	272
Eco88I	CYCGRG	1 cut(s)	726
Eco91I	GGTNACC	1 cut(s)	77
EcoO65I	GGTNACC	1 cut(s)	77
EcoRI	GAATTC	1 cut(s)	349
EcoRII	CCWGG	1 cut(s)	514
EcoT14I	CCWWGG	1 cut(s)	212
ErhI	CCWWGG	1 cut(s)	212
Esp3I	CGTCTC	1 cut(s)	16
FaeI	CATG	1 cut(s)	990
FaiI	YATR	5 cut(s)	111, 155, 202, 321, 988
FatI	CATG	1 cut(s)	986
FauI	CCCGC	2 cut(s)	806, 826
FbaI	TGATCA	1 cut(s)	807
Fnu4HI	GCNGC	6 cut(s)	161, 600, 714, 722, 850, 868
FokI	GGATG	4 cut(s)	500, 713, 852, 939
Fsp4HI	GCNGC	6 cut(s)	161, 600, 714, 722, 850, 868
FspBI	CTAG	5 cut(s)	360, 375, 410, 453, 779
GlaI	GCGC	1 cut(s)	853
GluI	GCNGC	6 cut(s)	161, 600, 714, 722, 850, 868
HapII	CCGG	3 cut(s)	164, 233, 311
HgaI	GACGC	1 cut(s)	166
HhaI	GCGC	1 cut(s)	854
Hin1I	GRCGYC	2 cut(s)	158, 548
Hin1II	CATG	1 cut(s)	990
Hin6I	GCGC	1 cut(s)	852
HinP1I	GCGC	1 cut(s)	852
HinfI	GANTC	7 cut(s)	288, 307, 428, 434, 526, 676, 817
HpaII	CCGG	3 cut(s)	164, 233, 311
HphI	GGTGA	5 cut(s)	71, 229, 325, 547, 931
Hpy166II	GTNNAC	2 cut(s)	512, 543
Hpy188I	TCNGA	9 cut(s)	208, 229, 287, 355, 366, 417, 433, 800, 822
Hpy188III	TCNNGA	2 cut(s)	269, 444
Hpy8I	GTNNAC	2 cut(s)	512, 543
Hpy99I	CGWCG	5 cut(s)	38, 275, 395, 550, 553
HpyAV	CCTTC	6 cut(s)	82, 153, 648, 733, 738, 782
HpyCH4III	ACNGT	2 cut(s)	178, 471
HpyCH4IV	ACGT	2 cut(s)	548, 572
HpyCH4V	TGCA	2 cut(s)	716, 999
HpyF10VI	GCNNNNNNNGC	4 cut(s)	63, 587, 596, 849
HpyF3I	CTNAG	3 cut(s)	192, 207, 303
HpySE526I	ACGT	2 cut(s)	548, 572
Hsp92I	GRCGYC	2 cut(s)	158, 548
Hsp92II	CATG	1 cut(s)	990
HspAI	GCGC	1 cut(s)	852
Ksp22I	TGATCA	1 cut(s)	807
Kzo9I	GATC	4 cut(s)	127, 355, 412, 807
LguI	GCTCTTC	1 cut(s)	660
LmnI	GCTCC	1 cut(s)	71
LpnPI	CCDG	6 cut(s)	177, 246, 249, 324, 501, 528
Lsp1109I	GCAGC	1 cut(s)	700
LweI	GCATC	1 cut(s)	830
MaeI	CTAG	5 cut(s)	360, 375, 410, 453, 779
MaeII	ACGT	2 cut(s)	548, 572
MaeIII	GTNAC	2 cut(s)	77, 584
MalI	GATC	4 cut(s)	129, 357, 414, 809
MbiI	CCGCTC	2 cut(s)	599, 849
MboI	GATC	4 cut(s)	127, 355, 412, 807
MboII	GAAGA	4 cut(s)	50, 107, 677, 700
MflI	RGATCY	2 cut(s)	355, 412
MluCI	AATT	5 cut(s)	170, 349, 439, 482, 494
MlyI	GAGTC	2 cut(s)	301, 685
MmeI	TCCRAC	2 cut(s)	207, 344
MseI	TTAA	3 cut(s)	243, 257, 465
MspA1I	CMGCKG	1 cut(s)	813
MspI	CCGG	3 cut(s)	164, 233, 311
MspR9I	CCNGG	1 cut(s)	516
MssI	GTTTAAAC	1 cut(s)	466
MvaI	CCWGG	1 cut(s)	516
MvnI	CGCG	1 cut(s)	854
MwoI	GCNNNNNNNGC	4 cut(s)	63, 587, 596, 849
NdeII	GATC	4 cut(s)	127, 355, 412, 807
NlaIII	CATG	1 cut(s)	990
NlaIV	GGNNCC	1 cut(s)	231
NmuCI	GTSAC	1 cut(s)	77
PciSI	GCTCTTC	1 cut(s)	660
PcsI	WCGNNNNNNNCGW	2 cut(s)	467, 578
PfeI	GAWTC	5 cut(s)	288, 428, 434, 526, 817
PkrI	GCNGC	6 cut(s)	162, 601, 715, 723, 851, 869
PleI	GAGTC	2 cut(s)	301, 684
PmeI	GTTTAAAC	1 cut(s)	466
PpsI	GAGTC	2 cut(s)	301, 684
Psp1406I	AACGTT	1 cut(s)	572
Psp6I	CCWGG	1 cut(s)	514
PspEI	GGTNACC	1 cut(s)	77
PspGI	CCWGG	1 cut(s)	514
PspN4I	GGNNCC	1 cut(s)	231
PsuI	RGATCY	2 cut(s)	355, 412
RsaI	GTAC	2 cut(s)	542, 749
RsaNI	GTAC	2 cut(s)	541, 748
SapI	GCTCTTC	1 cut(s)	660
SaqAI	TTAA	3 cut(s)	243, 257, 465
SatI	GCNGC	6 cut(s)	161, 600, 714, 722, 850, 868
Sau3AI	GATC	4 cut(s)	127, 355, 412, 807
SchI	GAGTC	2 cut(s)	301, 685
ScrFI	CCNGG	1 cut(s)	516
SfaNI	GCATC	1 cut(s)	830
SpeI	ACTAGT	1 cut(s)	778
Sse9I	AATT	5 cut(s)	170, 349, 439, 482, 494
SspMI	CTAG	5 cut(s)	360, 375, 410, 453, 779
StyD4I	CCNGG	1 cut(s)	514
StyI	CCWWGG	1 cut(s)	212
TaaI	ACNGT	2 cut(s)	178, 471
TaiI	ACGT	2 cut(s)	551, 575
TaqI	TCGA	5 cut(s)	126, 180, 270, 443, 644
TaqII	GACCGA	1 cut(s)	65
TasI	AATT	5 cut(s)	170, 349, 439, 482, 494
TatI	WGTACW	1 cut(s)	540
TauI	GCSGC	5 cut(s)	163, 602, 724, 852, 870
TfiI	GAWTC	5 cut(s)	288, 428, 434, 526, 817
Tru1I	TTAA	3 cut(s)	243, 257, 465
Tru9I	TTAA	3 cut(s)	243, 257, 465
TseFI	GTSAC	1 cut(s)	77
TseI	GCWGC	1 cut(s)	713
Tsp45I	GTSAC	1 cut(s)	77
TspGWI	ACGGA	1 cut(s)	288
XapI	RAATTY	3 cut(s)	170, 349, 494
XspI	CTAG	5 cut(s)	360, 375, 410, 453, 779
ZraI	GACGTC	1 cut(s)	549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.