Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004963

Physical Location & Seq

Genomic Coordinates Reverse (-)

50274850 .. 50278637

Gene Structure 3788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0355300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGGCCTACACTCCCACGATGAGCTCCACCAAATCCCGCCGTAAAGTGGCTCCGGCGGCCGCAGATAACGGCGACTCCGGCGAGAAACTCGACCAACTCCTCCTCTCCTCCGCCATCTCCAACGGCGAGGACGTCGGCCCCTTCGTCCGCAAAGCCTTCGCCTCCGGGAAACCCGAGACCCTCCTCCTCCACCTCCGCCACTTCACCCGCTCCAAAGAGTCCGAAATCGAAGAGGTCTGCCGGGCCCACTACCAAGACTTCATCCAAGCCGTCGACGACCTCCGATCTCTCCTCTCCGACGTGGACTCCCTCAAGTCTTCTCTCTCCGAATCCAACGCCAAGCTCCAGGCCGTCGGATTGCCGCTCCTGACGTCACTCGACGCCTTCGTCGAAGCTCGAAACGTCTGCCGAAACGTCAACCTGGCGCTCCAATCGGTCCGAAACTGTATTCGGCTCATGGAGCTCTGCTCCCGATCCAACTACCACCTCTCCCGAGGCAACTTCTACATGGCGCTCAAGTGTGTGGACACAATCGAGTGCGTGTTCCTGGACAAAACGCCGTCGTCTACGATTAAGCGGATGCTGGAGAAGAAGATTCCGGAGATTCGGTGGCATATCGAGCGCAAGGTGATGAAGGACTTCAACGATTGGCTGGTGGAGATCCGAGTGGTGTGCCGGAACTTAGGTCAATTGGCGATCGGTCAAGCTTCGTCGGCCAGGCAAAGAGAGGAGGATCTGAGAATCAAGCAGCGCCAAGCTGAGGAGCAGAGCAGGCTGAGCCTCAGAGATTGTGTCTACTCTTTGGAGGAGGAGGACGAAGATCCGGTTGGAGATGATAGTAGCAATGGTGAAGGGGTTGATTTGACTCCATTGTACAGAGCCTATCATATACACCAGACTCTGGGAGTTGAGGACCGGTTTAAGCAGTATTACTTCGAAAATCGCAAGCTTCAGCTCACTTCGGATTTTCAGGTATCTTCCATGACTCCGTTTCTTGAGTCTCATCAGACTTTCTTTGCGCAAATCGCCGGGTTTTTTATTGTGGAGGATAGAGTTGTGAGGACCGGAGGTGGATTGATATCGAAATTGGAGGTTGAGAATCTGTGGGAGACTGCTGTGAGTAAAATGTGTTCAGTTTTAGAGGATCAATTTTCTAGGATGCAGACTGCCAACCATTTGTTGCTGATTAAGGACTATGTGAGCTTGTTAGGTGTGACTTTGCGGAGGTATGGATATTTGGTTGATCCTTTGCTTGATGTGTTGAGCAAGCACAGGGATAAGTACCATGAGTTGCTATTATCGGATTGTAGAAAGCAGATTACGGAAGCACTTTCTGCGGATAAGTTTGATCAGATGTTGATGAAGAAAGAGTATGAGTATTCCATGAATGTGCTTTCGTTTCAGTTACAGACTTCTGATATCACTCCAGCTTTTCCTTATGTTGCACCCTTTAGCTCTACGGTGCCTGATTGTTGCCGCATTGTGCGGTCTTTTATTGAGGATTCTGTGAGTTTCATGTCCTATGGTGGGCAGCTTGATTTCTTTGAGGTTGTGAAGAAGTATTTGGATCGGCTATTAAGTGAGGATTTAGATGGCACTCTTGTGAAGCTTATCAATACATCCATCAGTGCGGTCTCCCAGGCAATGCAGGTGGCTGCTAATATGGCTGTCATGGAGAGAGCTTGTGATTTCTTCTTCCGACATGCTGCTCAGCTTTCTGGCATTCCCTTGAGAATGGTGGAGAGGGGCAGGAGGCAGTTTCCGCTATGTAAAGCCCGCGATGCTGCAGAAGACATACTCTCAGGGTTGCTTAAACAAAAAGTTGATGGGTTCATGACACTGATGGAGAATGTGAACTGGATGGCTGATGAGACTCTGCAGAATGGGAATGAGTATGTGAATGAGCTGATCATATATTTGGAAACTCTGGTTTCCACTGCGCAGGAGATATTGCCACCAAATGTTCTTAAACGAGTTATACAAGATGTCCTTTCTCATATATCGGAGAAGATAGTTGGGGCTTTACTTGGGGACTCAGTTAAGAGGTTTACTGTAAATGCAATTATGAGCATCGATGTAGACATTCGGGTATTGGAATCTTTTGCAGATAATCAAGCACCTTTACTGTCAGAGGAGGATGCAAGTCAGTTGAAATCGGCACTTGCTGAGTCAAGGCAGTTGGTTAATTTACTCTTAAGCAACAATCCAGAGACTTTTCTTAATCCTGTAATCAGGGAGAGGAGTTACAATAACTTGGATTATAGAAAAGTAGTGATTATTTCAGAAAAATTGAGAGATCCTTCAGAGCGGCTATTTGGAACTTTTGGAAGCAGGGGAAGCAGGCAGAACCCAAAGAAGAAATCTCTAGATTTGTTGATAAAAAGACTCAAGGATATGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glutaredoxin

Protein Analysis

800

Amino Acids

90.89

Weight (kDa)

5.81

Isoelectric Point (pI)

47.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EXOC6_Sec15_N	PF20651	64 - 233	2.8e-46	Exocyst complex component EXOC6/Sec15, N-terminal
Sec15_C	PF04091	416 - 763	6.8e-93	Exocyst complex subunit Sec15 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004963)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32760 AT4G10630
fragaria_vesca	FvH4_5g10700
malus_domestica	MD06G1121200.v1.1 MD09G1197100.v1.1 MD14G1137800.v1.1
prunus_persica	Prupe.5G131800_v2.0.a1
pyrus_communis	pycom06g11250 pycom14g11300
rosa_chinensis	RchiOBHm_Chr1g0342161 RchiOBHm_Chr7g0187441
rosa_laevigata	RLG00000001600 RLG00000004781 RLG00000009467
rosa_multiflora	Rmu_sc0001230.1_g000015 Rmu_sc0003363.1_g000014 Rmu_sc0009146.1_g000005
rosa_roxburghii	Rroxscaffold_3G00267420
rosa_rugosa	Rorug06G0355300 Rorug06G0481600
rosa_samantha	Rh1CG026900 Rh5DG426300 Rh7AG086100 Rh7BG087600 Rh7CG087000 Rh7DG088600 Rh7DG307400 Rh7DG445500
rosa_wichuraiana	Rw2G033920 Rw7G007600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1639
AasI	GACNNNNNNGTC	1 cut(s)	386
AatII	GACGTC	2 cut(s)	135, 374
Acc16I	TGCGCA	2 cut(s)	1020, 1941
Acc36I	ACCTGC	1 cut(s)	1639
AccB1I	GGYRCC	1 cut(s)	1462
AccB7I	CCANNNNNTGG	1 cut(s)	901
AccBSI	CCGCTC	3 cut(s)	210, 364, 2308
AccI	GTMKAC	4 cut(s)	273, 566, 795, 2079
AccII	CGCG	1 cut(s)	1779
AccIII	TCCGGA	1 cut(s)	598
AclWI	GGATC	8 cut(s)	468, 655, 741, 815, 1152, 1238, 1575, 2291
AcoI	YGGCCR	2 cut(s)	57, 714
AcuI	CTGAAG	2 cut(s)	935, 2286
AcyI	GRCGYC	3 cut(s)	132, 371, 381
AfaI	GTAC	2 cut(s)	875, 1283
AfiI	CCNNNNNNNGG	4 cut(s)	46, 760, 901, 1527
AflII	CTTAAG	1 cut(s)	2194
AgeI	ACCGGT	1 cut(s)	915
AgsI	TTSAA	2 cut(s)	643, 2152
AjiI	CACGTC	1 cut(s)	301
AjnI	CCWGG	5 cut(s)	345, 420, 546, 716, 1638
AjuI	GAANNNNNNNTTGG	4 cut(s)	810, 842, 1547, 1579
AleI	CACNNNNGTG	1 cut(s)	1601
Alw21I	GWGCWC	2 cut(s)	26, 465
Alw26I	GTCTC	6 cut(s)	170, 1005, 1103, 1639, 1865, 2204
AlwI	GGATC	8 cut(s)	468, 655, 741, 815, 1152, 1238, 1575, 2291
AlwNI	CAGNNNCTG	1 cut(s)	901
Ama87I	CYCGRG	2 cut(s)	173, 492
Aor13HI	TCCGGA	1 cut(s)	598
AoxI	GGCC	6 cut(s)	3, 57, 136, 243, 348, 714
ApaI	GGGCCC	1 cut(s)	247
ApeKI	GCWGC	5 cut(s)	748, 1531, 1655, 1706, 1784
AsiGI	ACCGGT	1 cut(s)	915
Asp700I	GAANNNNTTC	1 cut(s)	638
AspLEI	GCGC	6 cut(s)	427, 514, 624, 753, 1021, 1942
AspS9I	GGNCC	6 cut(s)	137, 243, 244, 436, 913, 1062
AsuC2I	CCSGG	3 cut(s)	166, 242, 1030
AsuHPI	GGTGA	3 cut(s)	196, 640, 860
AsuII	TTCGAA	1 cut(s)	936
AvaI	CYCGRG	2 cut(s)	173, 492
AvaII	GGWCC	3 cut(s)	436, 913, 1062
BaeGI	GKGCMC	1 cut(s)	247
BanI	GGYRCC	1 cut(s)	1462
BanII	GRGCYC	3 cut(s)	26, 247, 465
BbsI	GAAGAC	2 cut(s)	309, 1797
Bbv12I	GWGCWC	2 cut(s)	26, 465
BbvCI	CCTCAGC	1 cut(s)	759
BbvI	GCAGC	5 cut(s)	760, 1543, 1642, 1693, 1771
BccI	CCATC	6 cut(s)	122, 1586, 1631, 1820, 1837, 1855
BceAI	ACGGC	6 cut(s)	24, 85, 139, 254, 335, 544
BcgI	CGANNNNNNTGC	6 cut(s)	139, 173, 387, 421, 654, 688
BciT130I	CCWGG	5 cut(s)	347, 422, 548, 718, 1640
BclI	TGATCA	2 cut(s)	1348, 1908
BcnI	CCSGG	3 cut(s)	166, 242, 1030
BcoDI	GTCTC	6 cut(s)	170, 1005, 1103, 1639, 1865, 2204
BfaI	CTAG	2 cut(s)	1155, 2366
BfmI	CTRYAG	2 cut(s)	1785, 1877
BfoI	RGCGCY	3 cut(s)	428, 515, 754
BfrI	CTTAAG	1 cut(s)	2194
BfuAI	ACCTGC	1 cut(s)	1639
BlpI	GCTNAGC	2 cut(s)	776, 1710
Bme1390I	CCNGG	8 cut(s)	166, 242, 347, 422, 548, 718, 1030, 1640
Bme18I	GGWCC	3 cut(s)	436, 913, 1062
BmeT110I	CYCGRG	2 cut(s)	173, 492
BmgBI	CACGTC	1 cut(s)	301
BmgT120I	GGNCC	6 cut(s)	137, 243, 244, 436, 913, 1062
BmiI	GGNNCC	4 cut(s)	51, 139, 245, 1464
BmrFI	CCNGG	8 cut(s)	166, 242, 347, 422, 548, 718, 1030, 1640
BmsI	GCATC	5 cut(s)	570, 1149, 1771, 2079, 2128
BpiI	GAAGAC	2 cut(s)	309, 1797
BplI	GAGNNNNNCTC	2 cut(s)	452, 484
BpmI	CTGGAG	3 cut(s)	329, 605, 1410
Bpu10I	CCTNAGC	1 cut(s)	759
Bpu1102I	GCTNAGC	2 cut(s)	776, 1710
Bpu14I	TTCGAA	1 cut(s)	936
BpuEI	CTTGAG	5 cut(s)	296, 500, 1016, 1750, 2372
BpuMI	CCSGG	3 cut(s)	166, 242, 1030
Bsa29I	ATCGAT	1 cut(s)	2073
BsaBI	GATNNNNATC	1 cut(s)	1078
BsaHI	GRCGYC	3 cut(s)	132, 371, 381
BsaI	GGTCTC	2 cut(s)	170, 1639
BsaJI	CCNNGG	2 cut(s)	493, 1638
BsaWI	WCCGGW	4 cut(s)	598, 823, 915, 1064
BsaXI	ACNNNNNCTCC	8 cut(s)	59, 89, 290, 320, 473, 503, 593, 623
Bsc4I	CCNNNNNNNGG	4 cut(s)	46, 760, 901, 1527
Bse118I	RCCGGY	1 cut(s)	915
Bse1I	ACTGG	1 cut(s)	1862
Bse3DI	GCAATG	2 cut(s)	850, 1650
Bse8I	GATNNNNATC	1 cut(s)	1078
BseAI	TCCGGA	1 cut(s)	598
BseBI	CCWGG	5 cut(s)	347, 422, 548, 718, 1640
BseCI	ATCGAT	1 cut(s)	2073
BseDI	CCNNGG	2 cut(s)	493, 1638
BseGI	GGATG	6 cut(s)	261, 585, 1164, 1619, 1866, 2143
BseJI	GATNNNNATC	1 cut(s)	1078
BseLI	CCNNNNNNNGG	4 cut(s)	46, 760, 901, 1527
BseMI	GCAATG	2 cut(s)	850, 1650
BseMII	CTCAG	8 cut(s)	728, 750, 767, 796, 1724, 1815, 2049, 2157
BseNI	ACTGG	1 cut(s)	1862
BseSI	GKGCMC	1 cut(s)	247
BseX3I	CGGCCG	1 cut(s)	57
BseXI	GCAGC	5 cut(s)	760, 1543, 1642, 1693, 1771
Bsh1236I	CGCG	1 cut(s)	1779
Bsh1285I	CGRYCG	2 cut(s)	60, 699
BshFI	GGCC	6 cut(s)	5, 59, 138, 245, 350, 716
BshNI	GGYRCC	1 cut(s)	1462
BshTI	ACCGGT	1 cut(s)	915
BshVI	ATCGAT	1 cut(s)	2073
BsiEI	CGRYCG	2 cut(s)	60, 699
BsiHKAI	GWGCWC	2 cut(s)	26, 465
BsiHKCI	CYCGRG	2 cut(s)	173, 492
BslFI	GGGAC	1 cut(s)	2045
BslI	CCNNNNNNNGG	4 cut(s)	46, 760, 901, 1527
BsmAI	GTCTC	6 cut(s)	170, 1005, 1103, 1639, 1865, 2204
BsmFI	GGGAC	1 cut(s)	2045
BsmI	GAATGC	1 cut(s)	1722
BsnI	GGCC	6 cut(s)	5, 59, 138, 245, 350, 716
Bso31I	GGTCTC	2 cut(s)	170, 1639
BsoBI	CYCGRG	2 cut(s)	173, 492
Bsp119I	TTCGAA	1 cut(s)	936
Bsp120I	GGGCCC	1 cut(s)	243
Bsp1286I	GDGCHC	3 cut(s)	26, 247, 465
Bsp13I	TCCGGA	1 cut(s)	598
Bsp1407I	TGTACA	1 cut(s)	873
Bsp1720I	GCTNAGC	2 cut(s)	776, 1710
BspANI	GGCC	6 cut(s)	5, 59, 138, 245, 350, 716
BspCNI	CTCAG	8 cut(s)	729, 751, 768, 795, 1723, 1814, 2048, 2158
BspDI	ATCGAT	1 cut(s)	2073
BspEI	TCCGGA	1 cut(s)	598
BspFNI	CGCG	1 cut(s)	1779
BspHI	TCATGA	1 cut(s)	1833
BspLI	GGNNCC	4 cut(s)	51, 139, 245, 1464
BspMAI	CTGCAG	2 cut(s)	1789, 1881
BspMI	ACCTGC	1 cut(s)	1639
BspPI	GGATC	8 cut(s)	468, 655, 741, 815, 1152, 1238, 1575, 2291
BspT104I	TTCGAA	1 cut(s)	936
BspT107I	GGYRCC	1 cut(s)	1462
BspTI	CTTAAG	1 cut(s)	2194
BspTNI	GGTCTC	2 cut(s)	170, 1639
BsrBI	CCGCTC	3 cut(s)	210, 364, 2308
BsrDI	GCAATG	2 cut(s)	850, 1650
BsrFI	RCCGGY	1 cut(s)	915
BsrGI	TGTACA	1 cut(s)	873
BsrI	ACTGG	1 cut(s)	1862
BssAI	RCCGGY	1 cut(s)	915
BssECI	CCNNGG	2 cut(s)	493, 1638
BssNI	GRCGYC	3 cut(s)	132, 371, 381
Bst2UI	CCWGG	5 cut(s)	347, 422, 548, 718, 1640
Bst4CI	ACNGT	4 cut(s)	446, 1462, 2053, 2127
Bst6I	CTCTTC	1 cut(s)	225
BstACI	GRCGYC	3 cut(s)	132, 371, 381
BstAFI	CTTAAG	1 cut(s)	2194
BstAPI	GCANNNNNTGC	1 cut(s)	1334
BstAUI	TGTACA	1 cut(s)	873
BstBI	TTCGAA	1 cut(s)	936
BstC8I	GCNNGC	5 cut(s)	773, 947, 1268, 1777, 2342
BstDEI	CTNAG	9 cut(s)	682, 737, 759, 776, 782, 1710, 1801, 2035, 2166
BstF5I	GGATG	6 cut(s)	261, 585, 1164, 1619, 1866, 2143
BstFNI	CGCG	1 cut(s)	1779
BstH2I	RGCGCY	3 cut(s)	428, 515, 754
BstHHI	GCGC	6 cut(s)	427, 514, 624, 753, 1021, 1942
BstMAI	GTCTC	6 cut(s)	170, 1005, 1103, 1639, 1865, 2204
BstMCI	CGRYCG	2 cut(s)	60, 699
BstNI	CCWGG	5 cut(s)	347, 422, 548, 718, 1640
BstNSI	RCATGY	1 cut(s)	1706
BstSCI	CCNGG	8 cut(s)	164, 240, 345, 420, 546, 716, 1028, 1638
BstSFI	CTRYAG	2 cut(s)	1785, 1877
BstSLI	GKGCMC	1 cut(s)	247
BstUI	CGCG	1 cut(s)	1779
BstV1I	GCAGC	5 cut(s)	760, 1543, 1642, 1693, 1771
BstV2I	GAAGAC	2 cut(s)	309, 1797
BstX2I	RGATCY	4 cut(s)	660, 733, 820, 2296
BstYI	RGATCY	4 cut(s)	660, 733, 820, 2296
BstZI	CGGCCG	1 cut(s)	57
Bsu15I	ATCGAT	1 cut(s)	2073
BsuRI	GGCC	6 cut(s)	5, 59, 138, 245, 350, 716
BsuTUI	ATCGAT	1 cut(s)	2073
BtgZI	GCGATG	1 cut(s)	1794
BtrI	CACGTC	1 cut(s)	301
BtsCI	GGATG	6 cut(s)	261, 585, 1164, 1619, 1866, 2143
BtsI	GCAGTG	1 cut(s)	1935
BtsIMutI	CAGTG	3 cut(s)	1633, 1838, 1935
BveI	ACCTGC	1 cut(s)	1639
Cac8I	GCNNGC	5 cut(s)	773, 947, 1268, 1777, 2342
CaiI	CAGNNNCTG	1 cut(s)	901
CciI	TCATGA	1 cut(s)	1833
CciNI	GCGGCCGC	1 cut(s)	57
CfoI	GCGC	6 cut(s)	427, 514, 624, 753, 1021, 1942
Cfr10I	RCCGGY	1 cut(s)	915
Cfr13I	GGNCC	6 cut(s)	137, 243, 244, 436, 913, 1062
ClaI	ATCGAT	1 cut(s)	2073
CpoI	CGGWCCG	1 cut(s)	436
CseI	GACGC	1 cut(s)	389
Csp6I	GTAC	2 cut(s)	874, 1282
CspAI	ACCGGT	1 cut(s)	915
CspCI	CAANNNNNGTGG	2 cut(s)	1632, 1667
CspI	CGGWCCG	1 cut(s)	436
CviAII	CATG	9 cut(s)	457, 508, 982, 1286, 1384, 1516, 1672, 1703, 1834
CviQI	GTAC	2 cut(s)	874, 1282
DdeI	CTNAG	9 cut(s)	682, 737, 759, 776, 782, 1710, 1801, 2035, 2166
DrdI	GACNNNNNNGTC	1 cut(s)	386
DseDI	GACNNNNNNGTC	1 cut(s)	386
EaeI	YGGCCR	2 cut(s)	57, 714
EagI	CGGCCG	1 cut(s)	57
Eam1104I	CTCTTC	1 cut(s)	225
EarI	CTCTTC	1 cut(s)	225
EciI	GGCGGA	2 cut(s)	100, 185
Ecl136II	GAGCTC	2 cut(s)	24, 463
EclXI	CGGCCG	1 cut(s)	57
Eco24I	GRGCYC	3 cut(s)	26, 247, 465
Eco31I	GGTCTC	2 cut(s)	170, 1639
Eco32I	GATATC	2 cut(s)	1080, 1420
Eco47I	GGWCC	3 cut(s)	436, 913, 1062
Eco52I	CGGCCG	1 cut(s)	57
Eco53kI	GAGCTC	2 cut(s)	24, 463
Eco57I	CTGAAG	2 cut(s)	935, 2286
Eco88I	CYCGRG	2 cut(s)	173, 492
EcoICRI	GAGCTC	2 cut(s)	24, 463
EcoRII	CCWGG	5 cut(s)	345, 420, 546, 716, 1638
EcoRV	GATATC	2 cut(s)	1080, 1420
EcoT38I	GRGCYC	3 cut(s)	26, 247, 465
FaeI	CATG	9 cut(s)	460, 511, 985, 1289, 1387, 1519, 1675, 1706, 1837
FalI	AAGNNNNNCTT	2 cut(s)	1974, 2006
FaqI	GGGAC	1 cut(s)	2045
FatI	CATG	9 cut(s)	456, 507, 981, 1285, 1383, 1515, 1671, 1702, 1833
FauI	CCCGC	3 cut(s)	44, 215, 1784
FbaI	TGATCA	2 cut(s)	1348, 1908
FblI	GTMKAC	4 cut(s)	273, 566, 795, 2079
FokI	GGATG	6 cut(s)	248, 592, 1171, 1606, 1873, 2150
FriOI	GRGCYC	3 cut(s)	26, 247, 465
FspBI	CTAG	2 cut(s)	1155, 2366
FspI	TGCGCA	2 cut(s)	1020, 1941
GlaI	GCGC	6 cut(s)	426, 513, 623, 752, 1020, 1941
GsuI	CTGGAG	3 cut(s)	329, 605, 1410
HaeII	RGCGCY	3 cut(s)	428, 515, 754
HaeIII	GGCC	6 cut(s)	5, 59, 138, 245, 350, 716
HgaI	GACGC	1 cut(s)	389
HhaI	GCGC	6 cut(s)	427, 514, 624, 753, 1021, 1942
Hin1I	GRCGYC	3 cut(s)	132, 371, 381
Hin1II	CATG	9 cut(s)	460, 511, 985, 1289, 1387, 1519, 1675, 1706, 1837
Hin6I	GCGC	6 cut(s)	425, 512, 622, 751, 1019, 1940
HinP1I	GCGC	6 cut(s)	425, 512, 622, 751, 1019, 1940
HincII	GTYRAC	2 cut(s)	274, 418
HindII	GTYRAC	2 cut(s)	274, 418
HindIII	AAGCTT	3 cut(s)	705, 947, 1607
HphI	GGTGA	3 cut(s)	196, 640, 860
Hpy166II	GTNNAC	9 cut(s)	274, 304, 418, 526, 567, 796, 1855, 2049, 2080
Hpy188III	TCNNGA	8 cut(s)	367, 471, 492, 599, 995, 1834, 2207, 2366
Hpy8I	GTNNAC	9 cut(s)	274, 304, 418, 526, 567, 796, 1855, 2049, 2080
Hpy99I	CGWCG	9 cut(s)	137, 275, 278, 302, 356, 383, 392, 565, 715
HpyAV	CCTTC	6 cut(s)	151, 166, 394, 628, 845, 2310
HpyCH4III	ACNGT	4 cut(s)	446, 1462, 2053, 2127
HpyCH4IV	ACGT	5 cut(s)	132, 300, 371, 402, 414
HpyCH4V	TGCA	8 cut(s)	1162, 1445, 1648, 1787, 1879, 2060, 2105, 2141
HpyF3I	CTNAG	9 cut(s)	682, 737, 759, 776, 782, 1710, 1801, 2035, 2166
HpySE526I	ACGT	5 cut(s)	132, 300, 371, 402, 414
Hsp92I	GRCGYC	3 cut(s)	132, 371, 381
Hsp92II	CATG	9 cut(s)	460, 511, 985, 1289, 1387, 1519, 1675, 1706, 1837
HspAI	GCGC	6 cut(s)	425, 512, 622, 751, 1019, 1940
Kpn2I	TCCGGA	1 cut(s)	598
Ksp22I	TGATCA	2 cut(s)	1348, 1908
LmnI	GCTCC	9 cut(s)	29, 55, 215, 348, 369, 432, 460, 473, 763
Lsp1109I	GCAGC	5 cut(s)	760, 1543, 1642, 1693, 1771
LweI	GCATC	5 cut(s)	570, 1149, 1771, 2079, 2128
MaeI	CTAG	2 cut(s)	1155, 2366
MaeII	ACGT	5 cut(s)	132, 300, 371, 402, 414
MaeIII	GTNAC	4 cut(s)	372, 1213, 1404, 2243
MbiI	CCGCTC	3 cut(s)	210, 364, 2308
MfeI	CAATTG	1 cut(s)	689
MflI	RGATCY	4 cut(s)	660, 733, 820, 2296
MhlI	GDGCHC	3 cut(s)	26, 247, 465
MluCI	AATT	6 cut(s)	689, 1085, 1148, 2061, 2185, 2288
MmeI	TCCRAC	7 cut(s)	144, 321, 334, 357, 501, 808, 1723
MroI	TCCGGA	1 cut(s)	598
MroXI	GAANNNNTTC	1 cut(s)	638
MslI	CAYNNNNRTG	2 cut(s)	1388, 1601
MspCI	CTTAAG	1 cut(s)	2194
MspR9I	CCNGG	8 cut(s)	166, 242, 347, 422, 548, 718, 1030, 1640
MunI	CAATTG	1 cut(s)	689
Mva1269I	GAATGC	1 cut(s)	1722
MvaI	CCWGG	5 cut(s)	347, 422, 548, 718, 1640
MvnI	CGCG	1 cut(s)	1779
NciI	CCSGG	3 cut(s)	166, 242, 1030
NlaIII	CATG	9 cut(s)	460, 511, 985, 1289, 1387, 1519, 1675, 1706, 1837
NlaIV	GGNNCC	4 cut(s)	51, 139, 245, 1464
NmuCI	GTSAC	2 cut(s)	372, 1213
NotI	GCGGCCGC	1 cut(s)	57
NsbI	TGCGCA	2 cut(s)	1020, 1941
NspI	RCATGY	1 cut(s)	1706
NspV	TTCGAA	1 cut(s)	936
OliI	CACNNNNGTG	1 cut(s)	1601
PagI	TCATGA	1 cut(s)	1833
PaqCI	CACCTGC	1 cut(s)	1639
PcsI	WCGNNNNNNNCGW	4 cut(s)	129, 141, 384, 387
PctI	GAATGC	1 cut(s)	1722
PdmI	GAANNNNTTC	1 cut(s)	638
PfeI	GAWTC	7 cut(s)	329, 595, 604, 741, 1099, 1502, 2096
PflMI	CCANNNNNTGG	1 cut(s)	901
PfoI	TCCNGGA	2 cut(s)	164, 546
PinAI	ACCGGT	1 cut(s)	915
Ple19I	CGATCG	1 cut(s)	699
Psp124BI	GAGCTC	2 cut(s)	26, 465
Psp6I	CCWGG	5 cut(s)	345, 420, 546, 716, 1638
PspGI	CCWGG	5 cut(s)	345, 420, 546, 716, 1638
PspN4I	GGNNCC	4 cut(s)	51, 139, 245, 1464
PspOMI	GGGCCC	1 cut(s)	243
PspPI	GGNCC	6 cut(s)	137, 243, 244, 436, 913, 1062
PsrI	GAACNNNNNNTAC	2 cut(s)	1114, 1146
PstI	CTGCAG	2 cut(s)	1789, 1881
PstNI	CAGNNNCTG	1 cut(s)	901
PsuI	RGATCY	4 cut(s)	660, 733, 820, 2296
PvuI	CGATCG	1 cut(s)	699
RsaI	GTAC	2 cut(s)	875, 1283
RsaNI	GTAC	2 cut(s)	874, 1282
RseI	CAYNNNNRTG	2 cut(s)	1388, 1601
Rsr2I	CGGWCCG	1 cut(s)	436
RsrII	CGGWCCG	1 cut(s)	436
SacI	GAGCTC	2 cut(s)	26, 465
SalI	GTCGAC	1 cut(s)	272
Sau96I	GGNCC	6 cut(s)	137, 243, 244, 436, 913, 1062
ScrFI	CCNGG	8 cut(s)	166, 242, 347, 422, 548, 718, 1030, 1640
SduI	GDGCHC	3 cut(s)	26, 247, 465
SfaNI	GCATC	5 cut(s)	570, 1149, 1771, 2079, 2128
SfcI	CTRYAG	2 cut(s)	1785, 1877
SfuI	TTCGAA	1 cut(s)	936
SgrDI	CGTCGACG	1 cut(s)	272
SinI	GGWCC	3 cut(s)	436, 913, 1062
SmiMI	CAYNNNNRTG	2 cut(s)	1388, 1601
SmlI	CTYRAG	6 cut(s)	311, 515, 995, 1729, 2194, 2387
SmoI	CTYRAG	6 cut(s)	311, 515, 995, 1729, 2194, 2387
Sse9I	AATT	6 cut(s)	689, 1085, 1148, 2061, 2185, 2288
SspMI	CTAG	2 cut(s)	1155, 2366
SstI	GAGCTC	2 cut(s)	26, 465
StyD4I	CCNGG	8 cut(s)	164, 240, 345, 420, 546, 716, 1028, 1638
TaaI	ACNGT	4 cut(s)	446, 1462, 2053, 2127
TaiI	ACGT	5 cut(s)	135, 303, 374, 405, 417
TaqII	GACCGA	2 cut(s)	424, 689
TasI	AATT	6 cut(s)	689, 1085, 1148, 2061, 2185, 2288
TatI	WGTACW	1 cut(s)	873
TauI	GCSGC	5 cut(s)	59, 62, 364, 1479, 2311
TfiI	GAWTC	7 cut(s)	329, 595, 604, 741, 1099, 1502, 2096
TscAI	CASTG	3 cut(s)	1633, 1845, 1942
TseFI	GTSAC	2 cut(s)	372, 1213
TseI	GCWGC	5 cut(s)	748, 1531, 1655, 1706, 1784
Tsp45I	GTSAC	2 cut(s)	372, 1213
TspDTI	ATGAA	6 cut(s)	250, 647, 1376, 1400, 1504, 1822
TspGWI	ACGGA	2 cut(s)	978, 1337
TspRI	CASTG	3 cut(s)	1633, 1845, 1942
Van91I	CCANNNNNTGG	1 cut(s)	901
Vha464I	CTTAAG	1 cut(s)	2194
VpaK11BI	GGWCC	3 cut(s)	436, 913, 1062
XbaI	TCTAGA	1 cut(s)	2365
XceI	RCATGY	1 cut(s)	1706
XmiI	GTMKAC	4 cut(s)	273, 566, 795, 2079
XmnI	GAANNNNTTC	1 cut(s)	638
XspI	CTAG	2 cut(s)	1155, 2366
ZraI	GACGTC	2 cut(s)	133, 372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.