RLG00000009467

Glutaredoxin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0004963
Physical Location & Seq
Forward (+)
53293423 .. 53293839
417 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009467

Sequence Viewer

Length: 417 bp
ATGGAGAATCTCGGCGTGATGGTTTGCGTGCGTGACGTGTCGATGGATCGCGGATTCCGAGAAGAGCTGAATGACTTGATGGAAGGGAAAGGCAGAGATGCGGCGGTGCCGCCGAGGTTGTTTGTGAAGGGAAGATATGTGGGTGGATCCGAGGAGGTGTTGAAGATTGTGGAGGAGGGGTTGTTGGGGGAGATTCTAGAAGGTCTGCCCAAGAAGAGGGCCGGGTCGGTTTGCGAAGGTTGCGGAGAAGCGAAATTCTTGCCGTGTTTTCAGTGCAATGGGAGTTCGAAGATGGTGCTGGTGGTGAAAGAAGACGAGGTGGTGGTGGGGCAGAGGCAGGGAGGCAGCGGCACGGTGGTCGTGAGGTGTCCCGAGTGTAATGAGAATGGGTTGGTGCTCTGCCCAATTTGTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

139

Amino Acids

14.84

Weight (kDa)

5.01

Isoelectric Point (pI)

31.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRXCR1-2_C PF23733 78 - 138 2.4e-17 GRXCR1/2, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 106
AccII CGCG 1 cut(s) 51
AciI CCGC 6 cut(s) 51, 101, 104, 110, 243, 348
AclWI GGATC 3 cut(s) 54, 141, 154
AcsI RAATTY 1 cut(s) 254
AfiI CCNNNNNNNGG 1 cut(s) 216
AflIII ACRYGT 1 cut(s) 36
AgsI TTSAA 1 cut(s) 163
AjiI CACGTC 1 cut(s) 37
AluBI AGCT 2 cut(s) 67, 414
AluI AGCT 2 cut(s) 67, 414
Alw21I GWGCWC 1 cut(s) 399
AlwI GGATC 3 cut(s) 54, 141, 154
Ama87I CYCGRG 1 cut(s) 371
AoxI GGCC 1 cut(s) 219
ApeKI GCWGC 1 cut(s) 345
ApoI RAATTY 1 cut(s) 254
AspS9I GGNCC 1 cut(s) 219
AsuC2I CCSGG 1 cut(s) 223
AsuHPI GGTGA 1 cut(s) 316
AsuII TTCGAA 1 cut(s) 287
AvaI CYCGRG 1 cut(s) 371
BamHI GGATCC 1 cut(s) 146
BanI GGYRCC 1 cut(s) 106
BbsI GAAGAC 1 cut(s) 318
Bbv12I GWGCWC 1 cut(s) 399
BbvI GCAGC 1 cut(s) 357
BccI CCATC 4 cut(s) 13, 37, 73, 286
BceAI ACGGC 1 cut(s) 247
BcgI CGANNNNNNTGC 6 cut(s) 241, 275, 277, 311, 340, 374
BcnI CCSGG 1 cut(s) 223
BfaI CTAG 1 cut(s) 197
BisI GCNGC 4 cut(s) 102, 110, 346, 349
BlsI GCNGC 4 cut(s) 103, 111, 347, 350
Bme1390I CCNGG 1 cut(s) 223
BmeT110I CYCGRG 1 cut(s) 371
BmgBI CACGTC 1 cut(s) 37
BmgT120I GGNCC 1 cut(s) 219
BmiI GGNNCC 2 cut(s) 108, 148
BmrFI CCNGG 1 cut(s) 223
BmsI GCATC 1 cut(s) 88
BpiI GAAGAC 1 cut(s) 318
Bpu14I TTCGAA 1 cut(s) 287
BpuMI CCSGG 1 cut(s) 223
BsaJI CCNNGG 2 cut(s) 113, 150
BsaXI ACNNNNNCTCC 4 cut(s) 164, 167, 194, 197
Bsc4I CCNNNNNNNGG 1 cut(s) 216
Bse3DI GCAATG 1 cut(s) 283
BseDI CCNNGG 2 cut(s) 113, 150
BseLI CCNNNNNNNGG 1 cut(s) 216
BseMI GCAATG 1 cut(s) 283
BseRI GAGGAG 2 cut(s) 167, 188
BseXI GCAGC 1 cut(s) 357
Bsh1236I CGCG 1 cut(s) 51
BshFI GGCC 1 cut(s) 221
BshNI GGYRCC 1 cut(s) 106
BsiHKAI GWGCWC 1 cut(s) 399
BsiHKCI CYCGRG 1 cut(s) 371
BsiSI CCGG 1 cut(s) 222
BslFI GGGAC 1 cut(s) 354
BslI CCNNNNNNNGG 1 cut(s) 216
BsmFI GGGAC 1 cut(s) 354
BsnI GGCC 1 cut(s) 221
BsoBI CYCGRG 1 cut(s) 371
Bsp119I TTCGAA 1 cut(s) 287
Bsp1286I GDGCHC 1 cut(s) 399
Bsp143I GATC 2 cut(s) 46, 146
BspACI CCGC 6 cut(s) 51, 101, 104, 110, 243, 348
BspANI GGCC 1 cut(s) 221
BspFNI CGCG 1 cut(s) 51
BspLI GGNNCC 2 cut(s) 108, 148
BspPI GGATC 3 cut(s) 54, 141, 154
BspQI GCTCTTC 1 cut(s) 57
BspT104I TTCGAA 1 cut(s) 287
BspT107I GGYRCC 1 cut(s) 106
BsrDI GCAATG 1 cut(s) 283
BssECI CCNNGG 2 cut(s) 113, 150
BssMI GATC 2 cut(s) 46, 146
Bst4CI ACNGT 1 cut(s) 355
Bst6I CTCTTC 2 cut(s) 57, 209
BstBI TTCGAA 1 cut(s) 287
BstC8I GCNNGC 1 cut(s) 29
BstFNI CGCG 1 cut(s) 51
BstKTI GATC 2 cut(s) 49, 149
BstMBI GATC 2 cut(s) 46, 146
BstMWI GCNNNNNNNGC 1 cut(s) 240
BstSCI CCNGG 1 cut(s) 221
BstUI CGCG 1 cut(s) 51
BstV1I GCAGC 1 cut(s) 357
BstV2I GAAGAC 1 cut(s) 318
BstX2I RGATCY 1 cut(s) 146
BstYI RGATCY 1 cut(s) 146
BsuRI GGCC 1 cut(s) 221
BtrI CACGTC 1 cut(s) 37
BtsIMutI CAGTG 1 cut(s) 278
Cac8I GCNNGC 1 cut(s) 29
Cfr13I GGNCC 1 cut(s) 219
CviJI RGCY 3 cut(s) 67, 221, 414
CviKI_1 RGCY 3 cut(s) 67, 221, 414
DpnI GATC 2 cut(s) 48, 148
DpnII GATC 2 cut(s) 46, 146
Eam1104I CTCTTC 2 cut(s) 57, 209
EarI CTCTTC 2 cut(s) 57, 209
Eco88I CYCGRG 1 cut(s) 371
FaiI YATR 1 cut(s) 138
FaqI GGGAC 1 cut(s) 354
Fnu4HI GCNGC 4 cut(s) 102, 110, 346, 349
Fsp4HI GCNGC 4 cut(s) 102, 110, 346, 349
FspBI CTAG 1 cut(s) 197
GluI GCNGC 4 cut(s) 102, 110, 346, 349
HaeIII GGCC 1 cut(s) 221
HapII CCGG 1 cut(s) 222
HinfI GANTC 3 cut(s) 7, 54, 193
HpaII CCGG 1 cut(s) 222
HphI GGTGA 1 cut(s) 316
Hpy188I TCNGA 2 cut(s) 59, 151
Hpy188III TCNNGA 3 cut(s) 197, 361, 371
HpyAV CCTTC 4 cut(s) 77, 121, 194, 230
HpyCH4III ACNGT 1 cut(s) 355
HpyCH4IV ACGT 1 cut(s) 36
HpyCH4V TGCA 1 cut(s) 276
HpyF10VI GCNNNNNNNGC 1 cut(s) 240
HpySE526I ACGT 1 cut(s) 36
Kzo9I GATC 2 cut(s) 46, 146
LguI GCTCTTC 1 cut(s) 57
LpnPI CCDG 3 cut(s) 235, 284, 323
Lsp1109I GCAGC 1 cut(s) 357
LweI GCATC 1 cut(s) 88
MaeI CTAG 1 cut(s) 197
MaeII ACGT 1 cut(s) 36
MaeIII GTNAC 1 cut(s) 32
MalI GATC 2 cut(s) 48, 148
MboI GATC 2 cut(s) 46, 146
MboII GAAGA 6 cut(s) 74, 144, 175, 226, 301, 323
MflI RGATCY 1 cut(s) 146
MhlI GDGCHC 1 cut(s) 399
MluCI AATT 2 cut(s) 254, 405
MspA1I CMGCKG 1 cut(s) 348
MspI CCGG 1 cut(s) 222
MspR9I CCNGG 1 cut(s) 223
MvnI CGCG 1 cut(s) 51
MwoI GCNNNNNNNGC 1 cut(s) 240
NciI CCSGG 1 cut(s) 223
NdeII GATC 2 cut(s) 46, 146
NlaIV GGNNCC 2 cut(s) 108, 148
NmeAIII GCCGAG 1 cut(s) 138
NmuCI GTSAC 1 cut(s) 32
NspV TTCGAA 1 cut(s) 287
PciSI GCTCTTC 1 cut(s) 57
PcsI WCGNNNNNNNCGW 1 cut(s) 55
PfeI GAWTC 3 cut(s) 7, 54, 193
PkrI GCNGC 4 cut(s) 103, 111, 347, 350
PspN4I GGNNCC 2 cut(s) 108, 148
PspPI GGNCC 1 cut(s) 219
PsuI RGATCY 1 cut(s) 146
SapI GCTCTTC 1 cut(s) 57
SatI GCNGC 4 cut(s) 102, 110, 346, 349
Sau3AI GATC 2 cut(s) 46, 146
Sau96I GGNCC 1 cut(s) 219
ScrFI CCNGG 1 cut(s) 223
SduI GDGCHC 1 cut(s) 399
SetI ASST 9 cut(s) 39, 69, 119, 159, 205, 241, 321, 368, 416
SfaNI GCATC 1 cut(s) 88
SfuI TTCGAA 1 cut(s) 287
Sse9I AATT 2 cut(s) 254, 405
SsiI CCGC 6 cut(s) 51, 101, 104, 110, 243, 348
SspMI CTAG 1 cut(s) 197
StyD4I CCNGG 1 cut(s) 221
TaaI ACNGT 1 cut(s) 355
TaiI ACGT 1 cut(s) 39
TaqI TCGA 2 cut(s) 41, 287
TasI AATT 2 cut(s) 254, 405
TauI GCSGC 3 cut(s) 104, 112, 351
TfiI GAWTC 3 cut(s) 7, 54, 193
TscAI CASTG 1 cut(s) 278
TseFI GTSAC 1 cut(s) 32
TseI GCWGC 1 cut(s) 345
Tsp45I GTSAC 1 cut(s) 32
TspRI CASTG 1 cut(s) 278
XapI RAATTY 1 cut(s) 254
XbaI TCTAGA 1 cut(s) 196
XspI CTAG 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.