AT4G26210

mitochondrial ATP synthase g subunit family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0002646
Physical Location & Seq
Forward (+)
13281883 .. 13283512
1630 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G26210.1

Sequence Viewer

Length: 369 bp
ATGGCATCAAAGTTGCTACAATTGAAATCCAAGGCATGTGAAGCATCAAAGTTTGTTTCCAAGCATGGAACAACTTACTACAAACAGTTGCTGGATAAGAACAAGATGTATATCCAGGAGCCAGCTACTATAGAGAAATGCAATGAATTGTCTAAGCAGCTTCTCTACACTCGTCTTGCTAGCATTCCTGGGCGTTCTGAGTCATTTTGGAAGGAAGTCAATCACGTGAAGGGTTTATGGAAGAATCGGGCGGATTTGAAGGTTGAAGATGCTGGAATAGCTGCACTTTTTGGTCTGGAATGCTTTGCGTGGTACTGTGCAGGAGAGATTGTAGGAAGGGGCTTCACTTTCACCGGCTACTACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 map00190 map01100 map04714
Pfam Domains
Protein Families
ATP-synt_G

Protein Analysis

122

Amino Acids

13.87

Weight (kDa)

9.16

Isoelectric Point (pI)

43.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_G PF04718 16 - 120 1.9e-19 Mitochondrial ATP synthase g subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 251
AcvI CACGTG 1 cut(s) 226
AfaI GTAC 1 cut(s) 314
AgsI TTSAA 3 cut(s) 25, 259, 266
AjnI CCWGG 2 cut(s) 114, 187
AluBI AGCT 3 cut(s) 125, 160, 281
AluI AGCT 3 cut(s) 125, 160, 281
AlwNI CAGNNNCTG 1 cut(s) 91
ApeKI GCWGC 2 cut(s) 157, 281
AsuHPI GGTGA 1 cut(s) 343
AsuNHI GCTAGC 1 cut(s) 179
BbrPI CACGTG 1 cut(s) 226
BbvI GCAGC 2 cut(s) 169, 268
BciT130I CCWGG 2 cut(s) 116, 189
BfaI CTAG 1 cut(s) 180
BfmI CTRYAG 1 cut(s) 129
BisI GCNGC 2 cut(s) 158, 282
BlsI GCNGC 2 cut(s) 159, 283
Bme1390I CCNGG 2 cut(s) 116, 189
BmiI GGNNCC 1 cut(s) 120
BmrFI CCNGG 2 cut(s) 116, 189
BmsI GCATC 3 cut(s) 14, 53, 259
BmtI GCTAGC 1 cut(s) 183
BsaAI YACGTR 1 cut(s) 226
BsaBI GATNNNNATC 1 cut(s) 110
BsaJI CCNNGG 2 cut(s) 30, 188
BsaXI ACNNNNNCTCC 2 cut(s) 315, 345
Bse118I RCCGGY 1 cut(s) 353
Bse3DI GCAATG 1 cut(s) 148
Bse8I GATNNNNATC 1 cut(s) 110
BseBI CCWGG 2 cut(s) 116, 189
BseDI CCNNGG 2 cut(s) 30, 188
BseJI GATNNNNATC 1 cut(s) 110
BseMI GCAATG 1 cut(s) 148
BseMII CTCAG 1 cut(s) 189
BseXI GCAGC 2 cut(s) 169, 268
BsgI GTGCAG 2 cut(s) 267, 339
BsiSI CCGG 1 cut(s) 354
BsmI GAATGC 2 cut(s) 183, 305
BspACI CCGC 1 cut(s) 251
BspCNI CTCAG 1 cut(s) 190
BspLI GGNNCC 1 cut(s) 120
BspOI GCTAGC 1 cut(s) 183
BsrDI GCAATG 1 cut(s) 148
BsrFI RCCGGY 1 cut(s) 353
BssAI RCCGGY 1 cut(s) 353
BssECI CCNNGG 2 cut(s) 30, 188
BssT1I CCWWGG 1 cut(s) 30
Bst2UI CCWGG 2 cut(s) 116, 189
Bst4CI ACNGT 2 cut(s) 87, 317
BstBAI YACGTR 1 cut(s) 226
BstC8I GCNNGC 2 cut(s) 123, 181
BstDEI CTNAG 2 cut(s) 153, 198
BstMWI GCNNNNNNNGC 2 cut(s) 41, 278
BstNI CCWGG 2 cut(s) 116, 189
BstNSI RCATGY 1 cut(s) 39
BstSCI CCNGG 2 cut(s) 114, 187
BstSFI CTRYAG 1 cut(s) 129
BstV1I GCAGC 2 cut(s) 169, 268
Cac8I GCNNGC 2 cut(s) 123, 181
CaiI CAGNNNCTG 1 cut(s) 91
Cfr10I RCCGGY 1 cut(s) 353
Csp6I GTAC 1 cut(s) 313
CviAII CATG 2 cut(s) 36, 65
CviJI RGCY 6 cut(s) 121, 125, 160, 281, 342, 357
CviKI_1 RGCY 6 cut(s) 121, 125, 160, 281, 342, 357
CviQI GTAC 1 cut(s) 313
DdeI CTNAG 2 cut(s) 153, 198
EciI GGCGGA 1 cut(s) 266
Eco130I CCWWGG 1 cut(s) 30
Eco72I CACGTG 1 cut(s) 226
EcoRII CCWGG 2 cut(s) 114, 187
EcoT14I CCWWGG 1 cut(s) 30
ErhI CCWWGG 1 cut(s) 30
FaeI CATG 2 cut(s) 39, 68
FaiI YATR 5 cut(s) 37, 66, 111, 131, 238
FatI CATG 2 cut(s) 35, 64
Fnu4HI GCNGC 2 cut(s) 158, 282
Fsp4HI GCNGC 2 cut(s) 158, 282
FspBI CTAG 1 cut(s) 180
GluI GCNGC 2 cut(s) 158, 282
HapII CCGG 1 cut(s) 354
Hin1II CATG 2 cut(s) 39, 68
HinfI GANTC 2 cut(s) 200, 244
HpaII CCGG 1 cut(s) 354
HphI GGTGA 1 cut(s) 343
Hpy188I TCNGA 1 cut(s) 199
Hpy188III TCNNGA 1 cut(s) 296
HpyAV CCTTC 4 cut(s) 205, 223, 253, 330
HpyCH4III ACNGT 2 cut(s) 87, 317
HpyCH4IV ACGT 1 cut(s) 225
HpyCH4V TGCA 3 cut(s) 141, 284, 320
HpyF10VI GCNNNNNNNGC 2 cut(s) 41, 278
HpyF3I CTNAG 2 cut(s) 153, 198
HpySE526I ACGT 1 cut(s) 225
Hsp92II CATG 2 cut(s) 39, 68
LmnI GCTCC 1 cut(s) 118
LpnPI CCDG 9 cut(s) 77, 101, 128, 135, 174, 201, 258, 281, 306
Lsp1109I GCAGC 2 cut(s) 169, 268
LweI GCATC 3 cut(s) 14, 53, 259
MaeI CTAG 1 cut(s) 180
MaeII ACGT 1 cut(s) 225
MboII GAAGA 2 cut(s) 253, 278
MfeI CAATTG 1 cut(s) 20
MluCI AATT 2 cut(s) 20, 146
MlyI GAGTC 1 cut(s) 209
MspI CCGG 1 cut(s) 354
MspR9I CCNGG 2 cut(s) 116, 189
MunI CAATTG 1 cut(s) 20
Mva1269I GAATGC 2 cut(s) 183, 305
MvaI CCWGG 2 cut(s) 116, 189
MwoI GCNNNNNNNGC 2 cut(s) 41, 278
NheI GCTAGC 1 cut(s) 179
NlaIII CATG 2 cut(s) 39, 68
NlaIV GGNNCC 1 cut(s) 120
NspI RCATGY 1 cut(s) 39
PctI GAATGC 2 cut(s) 183, 305
PfeI GAWTC 1 cut(s) 244
PfoI TCCNGGA 1 cut(s) 114
PkrI GCNGC 2 cut(s) 159, 283
PleI GAGTC 1 cut(s) 208
PmaCI CACGTG 1 cut(s) 226
PmlI CACGTG 1 cut(s) 226
PpsI GAGTC 1 cut(s) 208
Ppu21I YACGTR 1 cut(s) 226
Psp6I CCWGG 2 cut(s) 114, 187
PspCI CACGTG 1 cut(s) 226
PspGI CCWGG 2 cut(s) 114, 187
PspN4I GGNNCC 1 cut(s) 120
PstNI CAGNNNCTG 1 cut(s) 91
RsaI GTAC 1 cut(s) 314
RsaNI GTAC 1 cut(s) 313
SatI GCNGC 2 cut(s) 158, 282
SchI GAGTC 1 cut(s) 209
ScrFI CCNGG 2 cut(s) 116, 189
SetI ASST 5 cut(s) 127, 162, 228, 264, 283
SfaNI GCATC 3 cut(s) 14, 53, 259
SfcI CTRYAG 1 cut(s) 129
Sse9I AATT 2 cut(s) 20, 146
SsiI CCGC 1 cut(s) 251
SspMI CTAG 1 cut(s) 180
StyD4I CCNGG 2 cut(s) 114, 187
StyI CCWWGG 1 cut(s) 30
TaaI ACNGT 2 cut(s) 87, 317
TaiI ACGT 1 cut(s) 228
TasI AATT 2 cut(s) 20, 146
TfiI GAWTC 1 cut(s) 244
TseI GCWGC 2 cut(s) 157, 281
TspDTI ATGAA 1 cut(s) 159
XceI RCATGY 1 cut(s) 39
XspI CTAG 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.