pycom15g18040

Mitochondrial ATP synthase g subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
12785256 .. 12786865
1610 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g18040.2

Sequence Viewer

Length: 369 bp
ATGGCATCGAAGTTGCGTCAGTTGCAATCTAAGGCTTGTCAAGCAACACAATTTGTGTCCCAACATGGAGGTACCTACTACAAGCAGTTGTTAGAGCAGAACAAGCAGTACATTCAGCACCCACCAACCGTGGAGAAGTGCAACGATTTGTCCAAGCAATTGTTTTACACTCGACTTGCTAGTATTCCTGGTCGTACTGAGTCATTCTGGAAGGAAGTTGATTATGTCAAGCATTTGTGGAAGAATAGGAAGGAGTTGAAGGTTGAAGATGCTGGAATTGCTGCTTTGTTTGGGCTGGAATGCTTTGCATGGTTTTGTGCCGGTGAGATTGTTGGAAGGGGATTTACTTTCACCGGTTACTATGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

123

Amino Acids

14.11

Weight (kDa)

9.06

Isoelectric Point (pI)

41.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 71
AccB1I GGYRCC 1 cut(s) 71
AfaI GTAC 3 cut(s) 73, 110, 196
AgeI ACCGGT 1 cut(s) 353
AgsI TTSAA 2 cut(s) 259, 266
AjnI CCWGG 1 cut(s) 187
ApeKI GCWGC 1 cut(s) 281
AsiGI ACCGGT 1 cut(s) 353
Asp718I GGTACC 1 cut(s) 71
AsuHPI GGTGA 2 cut(s) 335, 343
BanI GGYRCC 1 cut(s) 71
BarI GAAGNNNNNNTAC 2 cut(s) 328, 360
BbvI GCAGC 1 cut(s) 268
BciT130I CCWGG 1 cut(s) 189
BfaI CTAG 1 cut(s) 180
BisI GCNGC 1 cut(s) 282
BlsI GCNGC 1 cut(s) 283
Bme1390I CCNGG 1 cut(s) 189
BmiI GGNNCC 1 cut(s) 73
BmrFI CCNGG 1 cut(s) 189
BmsI GCATC 2 cut(s) 14, 259
BsaJI CCNNGG 1 cut(s) 129
BsaWI WCCGGW 1 cut(s) 353
Bse118I RCCGGY 2 cut(s) 320, 353
BseBI CCWGG 1 cut(s) 189
BseDI CCNNGG 1 cut(s) 129
BseMII CTCAG 1 cut(s) 189
BseXI GCAGC 1 cut(s) 268
BshNI GGYRCC 1 cut(s) 71
BshTI ACCGGT 1 cut(s) 353
BsiSI CCGG 2 cut(s) 321, 354
BslFI GGGAC 1 cut(s) 43
BsmFI GGGAC 1 cut(s) 43
BsmI GAATGC 1 cut(s) 305
BspCNI CTCAG 1 cut(s) 190
BspLI GGNNCC 1 cut(s) 73
BspT107I GGYRCC 1 cut(s) 71
BsrFI RCCGGY 2 cut(s) 320, 353
BssAI RCCGGY 2 cut(s) 320, 353
BssECI CCNNGG 1 cut(s) 129
Bst2UI CCWGG 1 cut(s) 189
Bst4CI ACNGT 1 cut(s) 130
BstDEI CTNAG 2 cut(s) 30, 198
BstDSI CCRYGG 1 cut(s) 129
BstMWI GCNNNNNNNGC 4 cut(s) 22, 41, 103, 278
BstNI CCWGG 1 cut(s) 189
BstSCI CCNGG 1 cut(s) 187
BstV1I GCAGC 1 cut(s) 268
BtgI CCRYGG 1 cut(s) 129
Cfr10I RCCGGY 2 cut(s) 320, 353
CseI GACGC 1 cut(s) 5
Csp6I GTAC 3 cut(s) 72, 109, 195
CspAI ACCGGT 1 cut(s) 353
CviAII CATG 2 cut(s) 65, 309
CviJI RGCY 2 cut(s) 35, 295
CviKI_1 RGCY 2 cut(s) 35, 295
CviQI GTAC 3 cut(s) 72, 109, 195
DdeI CTNAG 2 cut(s) 30, 198
EcoRII CCWGG 1 cut(s) 187
FaeI CATG 2 cut(s) 68, 312
FaiI YATR 4 cut(s) 66, 225, 310, 363
FaqI GGGAC 1 cut(s) 43
FatI CATG 2 cut(s) 64, 308
Fnu4HI GCNGC 1 cut(s) 282
Fsp4HI GCNGC 1 cut(s) 282
FspBI CTAG 1 cut(s) 180
GluI GCNGC 1 cut(s) 282
HapII CCGG 2 cut(s) 321, 354
HgaI GACGC 1 cut(s) 5
Hin1II CATG 2 cut(s) 68, 312
HinfI GANTC 1 cut(s) 200
HpaII CCGG 2 cut(s) 321, 354
HphI GGTGA 2 cut(s) 335, 343
Hpy188III TCNNGA 1 cut(s) 208
HpyAV CCTTC 4 cut(s) 205, 244, 253, 330
HpyCH4III ACNGT 1 cut(s) 130
HpyCH4V TGCA 3 cut(s) 25, 141, 308
HpyF10VI GCNNNNNNNGC 4 cut(s) 22, 41, 103, 278
HpyF3I CTNAG 2 cut(s) 30, 198
Hsp92II CATG 2 cut(s) 68, 312
KpnI GGTACC 1 cut(s) 75
LpnPI CCDG 6 cut(s) 174, 193, 201, 258, 281, 334
Lsp1109I GCAGC 1 cut(s) 268
LweI GCATC 2 cut(s) 14, 259
MaeI CTAG 1 cut(s) 180
MaeIII GTNAC 1 cut(s) 356
MboII GAAGA 2 cut(s) 253, 278
MfeI CAATTG 1 cut(s) 158
MluCI AATT 3 cut(s) 50, 158, 276
MlyI GAGTC 1 cut(s) 209
MmeI TCCRAC 1 cut(s) 313
MnlI CCTC 1 cut(s) 62
MspI CCGG 2 cut(s) 321, 354
MspR9I CCNGG 1 cut(s) 189
MunI CAATTG 1 cut(s) 158
Mva1269I GAATGC 1 cut(s) 305
MvaI CCWGG 1 cut(s) 189
MwoI GCNNNNNNNGC 4 cut(s) 22, 41, 103, 278
NlaIII CATG 2 cut(s) 68, 312
NlaIV GGNNCC 1 cut(s) 73
PctI GAATGC 1 cut(s) 305
PinAI ACCGGT 1 cut(s) 353
PkrI GCNGC 1 cut(s) 283
PleI GAGTC 1 cut(s) 208
PpsI GAGTC 1 cut(s) 208
Psp6I CCWGG 1 cut(s) 187
PspGI CCWGG 1 cut(s) 187
PspN4I GGNNCC 1 cut(s) 73
PsrI GAACNNNNNNTAC 2 cut(s) 92, 124
RsaI GTAC 3 cut(s) 73, 110, 196
RsaNI GTAC 3 cut(s) 72, 109, 195
SatI GCNGC 1 cut(s) 282
SchI GAGTC 1 cut(s) 209
ScrFI CCNGG 1 cut(s) 189
SetI ASST 3 cut(s) 73, 77, 264
SfaNI GCATC 2 cut(s) 14, 259
Sse9I AATT 3 cut(s) 50, 158, 276
SspMI CTAG 1 cut(s) 180
StyD4I CCNGG 1 cut(s) 187
TaaI ACNGT 1 cut(s) 130
TaqI TCGA 2 cut(s) 8, 172
TasI AATT 3 cut(s) 50, 158, 276
TatI WGTACW 1 cut(s) 108
TseI GCWGC 1 cut(s) 281
XspI CTAG 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.