Rh2CG079300

Mitochondrial ATP synthase g subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0002646
Physical Location & Seq
Reverse (-)
6470734 .. 6473446
2713 bp
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UTR
Exon/CDS
Intron
Rh2CG079300.1

Sequence Viewer

Length: 408 bp
ATGGTGAATGTAGGATTGACCCGGGCATCGATGGCCGCGATGGCATCAAAGTTGCGTCAGTTGCAGTCCAAGGCTTGCCAAGCGACTCAATTTGTGTCCAAGCATGGAACTACCTACTACAAACAGTTGTTAGAGCAGAACAAGCAATACATTCAGGAGCCGGCAACTGTGGAGAAATGCAGTGAGCTGTCAAAGCAATTGTTTTACACTCGACTTGCTAGTCTTCCGGGTCGGAATGAAGCACTGCGGAAGGAACTTGATTATGTCAAGAGTTTGTGGAAAAACAGGCAGGATTTGAAGGTTGAAGATGCTGGCATTGCTGCTTTGTTTGGGCTGGAGTGCTTCTGCTGGTTTTGTGTTGGTGAGATTGCAGGAAGGGGATTCACTATCACCGGTTACCATGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 map00190 map01100 map04714
Pfam Domains
Protein Families
ATP-synt_G

Protein Analysis

135

Amino Acids

15.26

Weight (kDa)

9.15

Isoelectric Point (pI)

46.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_G PF04718 28 - 134 3.4e-22 Mitochondrial ATP synthase g subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 219
AccII CGCG 1 cut(s) 38
AciI CCGC 2 cut(s) 36, 247
AcoI YGGCCR 1 cut(s) 33
AgeI ACCGGT 1 cut(s) 392
AgsI TTSAA 2 cut(s) 298, 305
AluBI AGCT 1 cut(s) 187
AluI AGCT 1 cut(s) 187
Ama87I CYCGRG 1 cut(s) 21
AoxI GGCC 1 cut(s) 33
ApeKI GCWGC 1 cut(s) 320
AsiGI ACCGGT 1 cut(s) 392
AsuC2I CCSGG 3 cut(s) 22, 23, 228
AsuHPI GGTGA 3 cut(s) 16, 374, 382
AvaI CYCGRG 1 cut(s) 21
BbsI GAAGAC 1 cut(s) 215
BbvI GCAGC 1 cut(s) 307
BccI CCATC 2 cut(s) 25, 34
BcnI CCSGG 3 cut(s) 22, 23, 228
BfaI CTAG 1 cut(s) 219
BglI GCCNNNNNGGC 1 cut(s) 41
BisI GCNGC 2 cut(s) 36, 321
BlsI GCNGC 2 cut(s) 37, 322
Bme1390I CCNGG 3 cut(s) 22, 23, 228
BmeT110I CYCGRG 1 cut(s) 21
BmiI GGNNCC 1 cut(s) 159
BmrFI CCNGG 3 cut(s) 22, 23, 228
BmsI GCATC 3 cut(s) 35, 53, 298
BpiI GAAGAC 1 cut(s) 215
BpmI CTGGAG 1 cut(s) 356
BpuMI CCSGG 3 cut(s) 22, 23, 228
Bsa29I ATCGAT 1 cut(s) 29
BsaJI CCNNGG 2 cut(s) 21, 69
BsaWI WCCGGW 1 cut(s) 392
Bse118I RCCGGY 2 cut(s) 160, 392
Bse3DI GCAATG 1 cut(s) 315
BseCI ATCGAT 1 cut(s) 29
BseDI CCNNGG 2 cut(s) 21, 69
BseMI GCAATG 1 cut(s) 315
BseXI GCAGC 1 cut(s) 307
Bsh1236I CGCG 1 cut(s) 38
BshFI GGCC 1 cut(s) 35
BshTI ACCGGT 1 cut(s) 392
BshVI ATCGAT 1 cut(s) 29
BsiHKCI CYCGRG 1 cut(s) 21
BsiSI CCGG 4 cut(s) 22, 161, 227, 393
BsnI GGCC 1 cut(s) 35
BsoBI CYCGRG 1 cut(s) 21
BspACI CCGC 2 cut(s) 36, 247
BspANI GGCC 1 cut(s) 35
BspDI ATCGAT 1 cut(s) 29
BspFNI CGCG 1 cut(s) 38
BspLI GGNNCC 1 cut(s) 159
BsrDI GCAATG 1 cut(s) 315
BsrFI RCCGGY 2 cut(s) 160, 392
BssAI RCCGGY 2 cut(s) 160, 392
BssECI CCNNGG 2 cut(s) 21, 69
BssT1I CCWWGG 1 cut(s) 69
Bst4CI ACNGT 2 cut(s) 126, 169
BstC8I GCNNGC 3 cut(s) 76, 162, 313
BstEII GGTNACC 1 cut(s) 395
BstFNI CGCG 1 cut(s) 38
BstMWI GCNNNNNNNGC 7 cut(s) 32, 41, 61, 80, 142, 193, 317
BstPI GGTNACC 1 cut(s) 395
BstSCI CCNGG 3 cut(s) 20, 21, 226
BstUI CGCG 1 cut(s) 38
BstV1I GCAGC 1 cut(s) 307
BstV2I GAAGAC 1 cut(s) 215
Bsu15I ATCGAT 1 cut(s) 29
BsuRI GGCC 1 cut(s) 35
BsuTUI ATCGAT 1 cut(s) 29
BtgZI GCGATG 1 cut(s) 53
BtsI GCAGTG 2 cut(s) 187, 242
BtsIMutI CAGTG 2 cut(s) 187, 242
Cac8I GCNNGC 3 cut(s) 76, 162, 313
Cfr10I RCCGGY 2 cut(s) 160, 392
Cfr9I CCCGGG 1 cut(s) 21
ClaI ATCGAT 1 cut(s) 29
CseI GACGC 1 cut(s) 44
CspAI ACCGGT 1 cut(s) 392
CviAII CATG 2 cut(s) 104, 401
CviJI RGCY 5 cut(s) 35, 74, 160, 187, 334
CviKI_1 RGCY 5 cut(s) 35, 74, 160, 187, 334
DrdI GACNNNNNNGTC 1 cut(s) 219
DseDI GACNNNNNNGTC 1 cut(s) 219
EaeI YGGCCR 1 cut(s) 33
Eco130I CCWWGG 1 cut(s) 69
Eco88I CYCGRG 1 cut(s) 21
Eco91I GGTNACC 1 cut(s) 395
EcoO65I GGTNACC 1 cut(s) 395
EcoT14I CCWWGG 1 cut(s) 69
ErhI CCWWGG 1 cut(s) 69
FaeI CATG 2 cut(s) 107, 404
FaiI YATR 3 cut(s) 105, 264, 402
FatI CATG 2 cut(s) 103, 400
Fnu4HI GCNGC 2 cut(s) 36, 321
Fsp4HI GCNGC 2 cut(s) 36, 321
FspBI CTAG 1 cut(s) 219
GluI GCNGC 2 cut(s) 36, 321
GsuI CTGGAG 1 cut(s) 356
HaeIII GGCC 1 cut(s) 35
HapII CCGG 4 cut(s) 22, 161, 227, 393
HgaI GACGC 1 cut(s) 44
Hin1II CATG 2 cut(s) 107, 404
HinfI GANTC 2 cut(s) 85, 381
HpaII CCGG 4 cut(s) 22, 161, 227, 393
HphI GGTGA 3 cut(s) 16, 374, 382
Hpy188I TCNGA 2 cut(s) 234, 407
Hpy188III TCNNGA 2 cut(s) 155, 268
HpyAV CCTTC 3 cut(s) 244, 292, 369
HpyCH4III ACNGT 2 cut(s) 126, 169
HpyCH4V TGCA 3 cut(s) 64, 180, 371
HpyF10VI GCNNNNNNNGC 7 cut(s) 32, 41, 61, 80, 142, 193, 317
Hsp92II CATG 2 cut(s) 107, 404
KroI GCCGGC 1 cut(s) 160
KroNI GCCGGC 1 cut(s) 162
LmnI GCTCC 1 cut(s) 157
Lsp1109I GCAGC 1 cut(s) 307
LweI GCATC 3 cut(s) 35, 53, 298
MaeI CTAG 1 cut(s) 219
MaeIII GTNAC 1 cut(s) 395
MboII GAAGA 2 cut(s) 215, 317
MfeI CAATTG 1 cut(s) 197
MluCI AATT 2 cut(s) 89, 197
MlyI GAGTC 1 cut(s) 79
MmeI TCCRAC 1 cut(s) 212
MroNI GCCGGC 1 cut(s) 160
MspI CCGG 4 cut(s) 22, 161, 227, 393
MspR9I CCNGG 3 cut(s) 22, 23, 228
MunI CAATTG 1 cut(s) 197
MvnI CGCG 1 cut(s) 38
MwoI GCNNNNNNNGC 7 cut(s) 32, 41, 61, 80, 142, 193, 317
NaeI GCCGGC 1 cut(s) 162
NciI CCSGG 3 cut(s) 22, 23, 228
NgoMIV GCCGGC 1 cut(s) 160
NlaIII CATG 2 cut(s) 107, 404
NlaIV GGNNCC 1 cut(s) 159
PcsI WCGNNNNNNNCGW 1 cut(s) 35
PdiI GCCGGC 1 cut(s) 162
PfeI GAWTC 1 cut(s) 381
PinAI ACCGGT 1 cut(s) 392
PkrI GCNGC 2 cut(s) 37, 322
PleI GAGTC 1 cut(s) 79
PpsI GAGTC 1 cut(s) 79
PspEI GGTNACC 1 cut(s) 395
PspN4I GGNNCC 1 cut(s) 159
PsrI GAACNNNNNNTAC 2 cut(s) 131, 163
SatI GCNGC 2 cut(s) 36, 321
SchI GAGTC 1 cut(s) 79
ScrFI CCNGG 3 cut(s) 22, 23, 228
SetI ASST 3 cut(s) 116, 189, 303
SfaNI GCATC 3 cut(s) 35, 53, 298
SmaI CCCGGG 1 cut(s) 23
Sse9I AATT 2 cut(s) 89, 197
SsiI CCGC 2 cut(s) 36, 247
SspMI CTAG 1 cut(s) 219
StyD4I CCNGG 3 cut(s) 20, 21, 226
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 2 cut(s) 126, 169
TaqI TCGA 2 cut(s) 29, 211
TasI AATT 2 cut(s) 89, 197
TauI GCSGC 1 cut(s) 38
TfiI GAWTC 1 cut(s) 381
TscAI CASTG 2 cut(s) 187, 249
TseI GCWGC 1 cut(s) 320
TspDTI ATGAA 1 cut(s) 252
TspMI CCCGGG 1 cut(s) 21
TspRI CASTG 2 cut(s) 187, 249
XmaI CCCGGG 1 cut(s) 21
XspI CTAG 1 cut(s) 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.