AT4G37740

growth-regulating factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
17725337 .. 17727909
2573 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G37740.1

Sequence Viewer

Length: 1608 bp
ATGGATATTGGTGTTCATGTTCTTGGGTCGGTTACTAGTAATGAAAATGAGTCACTTGGTCTAAAAGAGCTTATAGGAACTAAACAAGATAGATCCGGATTCATCGGTGAGGATTGCTTGCAACGAAGCTTGAAGCTAGCAAGAACGACAACTAGAGCGGAAGAAGAAGAAAACTTGTCTTCTTCTGTTGCAGCTGCTTATTGCAAAACGATGTCGTTTCACCAAGGCATTCCTCTCATGAGATCTGCTTCTCCTCTTTCCTCTGATTCTCGCCGTCAAGAACAAATGCTTAGCTTCTCAGATAAACCAGACGCTCTTGATTTCAGTAAATATGTCGGTTTGGATAATAGCAGTAATAACAAGAACTCTCTCTCGCCGTTTCTTCACCAGATTCCTCCACCTTCTTACTTTAGAAGCTCAGGAGGATATGGTTCTGGTGGAATGATGATGAACATGAGCATGCAAGGGAACTTCACAGGTGTTAAAGGACCTTTTACATTGACTCAATGGGCTGAGTTAGAGCAACAGGCGTTGATCTATAAGTACATCACAGCCAATGTCCCTGTTCCTTCTAGTTTGCTCATCTCTATCAAGAAGTCTTTTTATCCTTACGGATCTTTGCCTCCTAGTTCCTTCGGATGGGGAACTTTCCATCTCGGTTTCGCAGGCGGTAACATGGACCCTGAGCCAGGGAGATGCCGCAGAACAGATGGGAAGAAATGGCGGTGCTCAAGAGACGCCGTTCCTGATCAGAAATACTGTGAAAGACACATCAACAGAGGCCGTCATCGTTCAAGAAAGCCTGTGGAAGTCCAATCTGGCCAAAACCAAACCGCCGCTGCTGCATCCAAAGCGGTTACTACACCACAACAGCCTGTTGTCGCTGGTAATACTAACAGAAGCAATGCCCGTGCATCAAGCAACCGCAGCCTCGCCATTGGAAGTCAATATATCAATCCTTCTACAGAATCTTTACCTAACAACAGAGGAGTTTCGATATATCCTTCCACCGTCAACTTACAACCCAAGGAATCTCCGGTTATTCATCAGAAACACAGAAACAACAACAACCCTTTTGAGTTTGGACACATATCCTCTGATTCGTTACTCAACCCGAATACCGCAAAGACCTATGGATCATCGTTCTTGGATTTCAGCAGCAACCAAGAGAAGCATTCAGGGAATCACAATCACAATTCTTGGCCTGAAGAGCTGACATCAGATTGGACACAGCTCTCAATGTCAATTCCAATAGCATCATCATCCCCTTCCTCCACACACAACAACAACAATGCTCAAGAAAAAACAACACTCTCGCCTCTCAGGCTATCCCGCGAGCTTGACCTATCGATCCAAACCGATGAAACAACAATCGAGCCTACTGTGAAAAAGGTGAATACTTGGATACCAATCTCATGGGGAAACTCCTTAGGAGGTCCTCTAGGTGAAGTACTAAACAGTACAACGAATAGTCCAACATTTGGATCTTCTCCTACAGGGGTTTTGCAAAAGTCCACATTTTGTTCACTCTCTAACAACAGCTCCGTGAGCAGCCCCATTGCAGAGAACAACAGACACAATGGCGATTACTTTCATTACACAACCTGA

Protein Analysis

535

Amino Acids

58.58

Weight (kDa)

8.85

Isoelectric Point (pI)

56.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
QLQ PF08880 164 - 197 1.3e-13 QLQ
WRC PF08879 228 - 270 4.2e-21 WRC
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1481
AccBSI CCGCTC 1 cut(s) 158
AccII CGCG 1 cut(s) 1335
AccIII TCCGGA 1 cut(s) 95
AclWI GGATC 5 cut(s) 87, 622, 1144, 1345, 1492
AcoI YGGCCR 1 cut(s) 820
AcuI CTGAAG 1 cut(s) 1227
AcyI GRCGYC 1 cut(s) 738
AfaI GTAC 3 cut(s) 545, 1452, 1462
AfiI CCNNNNNNNGG 3 cut(s) 639, 689, 1481
AgsI TTSAA 2 cut(s) 133, 795
AhlI ACTAGT 1 cut(s) 35
AjnI CCWGG 1 cut(s) 688
Alw21I GWGCWC 1 cut(s) 731
Alw26I GTCTC 1 cut(s) 729
AlwI GGATC 5 cut(s) 87, 622, 1144, 1345, 1492
Aor13HI TCCGGA 1 cut(s) 95
AoxI GGCC 3 cut(s) 781, 820, 1202
ApeKI GCWGC 7 cut(s) 191, 194, 839, 842, 927, 1158, 1551
AspS9I GGNCC 3 cut(s) 488, 679, 1436
AsuHPI GGTGA 5 cut(s) 119, 212, 377, 1405, 1457
AsuNHI GCTAGC 1 cut(s) 136
AvaII GGWCC 3 cut(s) 488, 679, 1436
AxyI CCTNAGG 1 cut(s) 1429
BalI TGGCCA 1 cut(s) 822
BbsI GAAGAC 1 cut(s) 171
Bbv12I GWGCWC 1 cut(s) 731
BbvI GCAGC 7 cut(s) 181, 203, 826, 829, 939, 1170, 1563
BccI CCATC 3 cut(s) 633, 660, 704
BceAI ACGGC 4 cut(s) 258, 361, 725, 768
BciT130I CCWGG 1 cut(s) 690
BciVI GTATCC 1 cut(s) 1398
BclI TGATCA 1 cut(s) 748
BcoDI GTCTC 1 cut(s) 729
BcuI ACTAGT 1 cut(s) 35
BfaI CTAG 6 cut(s) 36, 137, 153, 573, 627, 1442
BfmI CTRYAG 2 cut(s) 963, 1494
BfuI GTATCC 1 cut(s) 1398
BglI GCCNNNNNGGC 1 cut(s) 1324
BglII AGATCT 1 cut(s) 242
BisI GCNGC 9 cut(s) 192, 195, 700, 837, 840, 843, 928, 1159, 1552
BlpI GCTNAGC 1 cut(s) 290
BlsI GCNGC 9 cut(s) 193, 196, 701, 838, 841, 844, 929, 1160, 1553
BmcAI AGTACT 1 cut(s) 1452
Bme1390I CCNGG 1 cut(s) 690
Bme18I GGWCC 3 cut(s) 488, 679, 1436
BmgT120I GGNCC 3 cut(s) 488, 679, 1436
BmiI GGNNCC 1 cut(s) 681
BmrFI CCNGG 1 cut(s) 690
BmsI GCATC 4 cut(s) 686, 854, 923, 1265
BmtI GCTAGC 1 cut(s) 140
BpiI GAAGAC 1 cut(s) 171
Bpu10I CCTNAGC 2 cut(s) 418, 684
Bpu1102I GCTNAGC 1 cut(s) 290
BpuEI CTTGAG 2 cut(s) 715, 1281
Bsa29I ATCGAT 1 cut(s) 1349
BsaBI GATNNNNATC 1 cut(s) 1409
BsaHI GRCGYC 1 cut(s) 738
BsaJI CCNNGG 3 cut(s) 223, 689, 1026
BsaWI WCCGGW 2 cut(s) 95, 1036
BsaXI ACNNNNNCTCC 2 cut(s) 1526, 1556
Bsc4I CCNNNNNNNGG 3 cut(s) 639, 689, 1481
Bse21I CCTNAGG 1 cut(s) 1429
Bse3DI GCAATG 2 cut(s) 910, 1557
Bse8I GATNNNNATC 1 cut(s) 1409
BseAI TCCGGA 1 cut(s) 95
BseBI CCWGG 1 cut(s) 690
BseCI ATCGAT 1 cut(s) 1349
BseDI CCNNGG 3 cut(s) 223, 689, 1026
BseGI GGATG 3 cut(s) 644, 845, 1262
BseJI GATNNNNATC 1 cut(s) 1409
BseLI CCNNNNNNNGG 3 cut(s) 639, 689, 1481
BseMI GCAATG 2 cut(s) 910, 1557
BseMII CTCAG 5 cut(s) 312, 432, 504, 675, 1336
BseRI GAGGAG 2 cut(s) 243, 1002
BseXI GCAGC 7 cut(s) 181, 203, 826, 829, 939, 1170, 1563
Bsh1236I CGCG 1 cut(s) 1335
BshFI GGCC 3 cut(s) 783, 822, 1204
BshVI ATCGAT 1 cut(s) 1349
BsiHKAI GWGCWC 1 cut(s) 731
BsiSI CCGG 2 cut(s) 96, 1037
BslFI GGGAC 1 cut(s) 545
BslI CCNNNNNNNGG 3 cut(s) 639, 689, 1481
BsmAI GTCTC 1 cut(s) 729
BsmBI CGTCTC 1 cut(s) 729
BsmFI GGGAC 1 cut(s) 545
BsmI GAATGC 2 cut(s) 228, 1174
BsnI GGCC 3 cut(s) 783, 822, 1204
Bsp1286I GDGCHC 1 cut(s) 731
Bsp13I TCCGGA 1 cut(s) 95
Bsp143I GATC 8 cut(s) 92, 242, 534, 614, 748, 1136, 1350, 1484
Bsp1720I GCTNAGC 1 cut(s) 290
BspANI GGCC 3 cut(s) 783, 822, 1204
BspCNI CTCAG 5 cut(s) 311, 431, 505, 676, 1335
BspDI ATCGAT 1 cut(s) 1349
BspEI TCCGGA 1 cut(s) 95
BspFNI CGCG 1 cut(s) 1335
BspHI TCATGA 1 cut(s) 237
BspLI GGNNCC 1 cut(s) 681
BspOI GCTAGC 1 cut(s) 140
BspPI GGATC 5 cut(s) 87, 622, 1144, 1345, 1492
BspQI GCTCTTC 1 cut(s) 1203
BsrBI CCGCTC 1 cut(s) 158
BsrDI GCAATG 2 cut(s) 910, 1557
BssECI CCNNGG 3 cut(s) 223, 689, 1026
BssMI GATC 8 cut(s) 92, 242, 534, 614, 748, 1136, 1350, 1484
BssNI GRCGYC 1 cut(s) 738
BssT1I CCWWGG 2 cut(s) 223, 1026
Bst2UI CCWGG 1 cut(s) 690
Bst4CI ACNGT 4 cut(s) 761, 1012, 1384, 1460
Bst6I CTCTTC 1 cut(s) 1203
BstACI GRCGYC 1 cut(s) 738
BstC8I GCNNGC 5 cut(s) 119, 138, 461, 667, 1337
BstDEI CTNAG 7 cut(s) 290, 298, 418, 513, 684, 1322, 1429
BstENI CCTNNNNNAGG 1 cut(s) 687
BstF5I GGATG 3 cut(s) 644, 845, 1262
BstFNI CGCG 1 cut(s) 1335
BstKTI GATC 8 cut(s) 95, 245, 537, 617, 751, 1139, 1353, 1487
BstMAI GTCTC 1 cut(s) 729
BstMBI GATC 8 cut(s) 92, 242, 534, 614, 748, 1136, 1350, 1484
BstMWI GCNNNNNNNGC 6 cut(s) 842, 851, 927, 1210, 1324, 1548
BstNI CCWGG 1 cut(s) 690
BstNSI RCATGY 1 cut(s) 463
BstSCI CCNGG 1 cut(s) 688
BstSFI CTRYAG 2 cut(s) 963, 1494
BstUI CGCG 1 cut(s) 1335
BstV1I GCAGC 7 cut(s) 181, 203, 826, 829, 939, 1170, 1563
BstV2I GAAGAC 1 cut(s) 171
BstX2I RGATCY 4 cut(s) 92, 242, 614, 1484
BstXI CCANNNNNNTGG 1 cut(s) 1416
BstYI RGATCY 4 cut(s) 92, 242, 614, 1484
Bsu15I ATCGAT 1 cut(s) 1349
Bsu36I CCTNAGG 1 cut(s) 1429
BsuI GTATCC 1 cut(s) 1398
BsuRI GGCC 3 cut(s) 783, 822, 1204
BsuTUI ATCGAT 1 cut(s) 1349
BtsCI GGATG 3 cut(s) 644, 845, 1262
Cac8I GCNNGC 5 cut(s) 119, 138, 461, 667, 1337
CciI TCATGA 1 cut(s) 237
Cfr13I GGNCC 3 cut(s) 488, 679, 1436
ClaI ATCGAT 1 cut(s) 1349
CseI GACGC 2 cut(s) 320, 746
Csp6I GTAC 3 cut(s) 544, 1451, 1461
CviAII CATG 6 cut(s) 17, 238, 454, 460, 676, 1416
CviQI GTAC 3 cut(s) 544, 1451, 1461
DdeI CTNAG 7 cut(s) 290, 298, 418, 513, 684, 1322, 1429
DpnI GATC 8 cut(s) 94, 244, 536, 616, 750, 1138, 1352, 1486
DpnII GATC 8 cut(s) 92, 242, 534, 614, 748, 1136, 1350, 1484
EaeI YGGCCR 1 cut(s) 820
Eam1104I CTCTTC 1 cut(s) 1203
EarI CTCTTC 1 cut(s) 1203
Eco130I CCWWGG 2 cut(s) 223, 1026
Eco47I GGWCC 3 cut(s) 488, 679, 1436
Eco57I CTGAAG 1 cut(s) 1227
Eco81I CCTNAGG 1 cut(s) 1429
EcoNI CCTNNNNNAGG 1 cut(s) 687
EcoO109I RGGNCCY 2 cut(s) 488, 1436
EcoRII CCWGG 1 cut(s) 688
EcoT14I CCWWGG 2 cut(s) 223, 1026
ErhI CCWWGG 2 cut(s) 223, 1026
Esp3I CGTCTC 1 cut(s) 729
FaeI CATG 6 cut(s) 20, 241, 457, 463, 679, 1419
FaqI GGGAC 1 cut(s) 545
FatI CATG 6 cut(s) 16, 237, 453, 459, 675, 1415
FauI CCCGC 1 cut(s) 1340
FbaI TGATCA 1 cut(s) 748
Fnu4HI GCNGC 9 cut(s) 192, 195, 700, 837, 840, 843, 928, 1159, 1552
FokI GGATG 3 cut(s) 651, 832, 1249
Fsp4HI GCNGC 9 cut(s) 192, 195, 700, 837, 840, 843, 928, 1159, 1552
FspBI CTAG 6 cut(s) 36, 137, 153, 573, 627, 1442
GluI GCNGC 9 cut(s) 192, 195, 700, 837, 840, 843, 928, 1159, 1552
HaeIII GGCC 3 cut(s) 783, 822, 1204
HapII CCGG 2 cut(s) 96, 1037
HgaI GACGC 2 cut(s) 320, 746
Hin1I GRCGYC 1 cut(s) 738
Hin1II CATG 6 cut(s) 20, 241, 457, 463, 679, 1419
HincII GTYRAC 1 cut(s) 1015
HindII GTYRAC 1 cut(s) 1015
HindIII AAGCTT 1 cut(s) 127
HinfI GANTC 9 cut(s) 50, 99, 266, 391, 502, 968, 1031, 1100, 1183
HpaII CCGG 2 cut(s) 96, 1037
HphI GGTGA 5 cut(s) 119, 212, 377, 1405, 1457
Hpy166II GTNNAC 3 cut(s) 1015, 1515, 1526
Hpy188I TCNGA 7 cut(s) 265, 301, 638, 753, 1050, 1099, 1222
Hpy8I GTNNAC 3 cut(s) 1015, 1515, 1526
HpyAV CCTTC 6 cut(s) 411, 579, 643, 969, 1014, 1278
HpyCH4III ACNGT 4 cut(s) 761, 1012, 1384, 1460
HpyCH4V TGCA 8 cut(s) 121, 191, 204, 463, 845, 914, 1507, 1562
HpyF10VI GCNNNNNNNGC 6 cut(s) 842, 851, 927, 1210, 1324, 1548
HpyF3I CTNAG 7 cut(s) 290, 298, 418, 513, 684, 1322, 1429
Hsp92I GRCGYC 1 cut(s) 738
Hsp92II CATG 6 cut(s) 20, 241, 457, 463, 679, 1419
Kpn2I TCCGGA 1 cut(s) 95
Ksp22I TGATCA 1 cut(s) 748
Kzo9I GATC 8 cut(s) 92, 242, 534, 614, 748, 1136, 1350, 1484
LguI GCTCTTC 1 cut(s) 1203
LmnI GCTCC 1 cut(s) 1547
Lsp1109I GCAGC 7 cut(s) 181, 203, 826, 829, 939, 1170, 1563
LweI GCATC 4 cut(s) 686, 854, 923, 1265
MaeI CTAG 6 cut(s) 36, 137, 153, 573, 627, 1442
MaeIII GTNAC 5 cut(s) 31, 51, 671, 856, 1104
MalI GATC 8 cut(s) 94, 244, 536, 616, 750, 1138, 1352, 1486
MbiI CCGCTC 1 cut(s) 158
MboI GATC 8 cut(s) 92, 242, 534, 614, 748, 1136, 1350, 1484
MboII GAAGA 9 cut(s) 171, 173, 174, 176, 179, 374, 727, 1220, 1479
MflI RGATCY 4 cut(s) 92, 242, 614, 1484
MhlI GDGCHC 1 cut(s) 731
MlsI TGGCCA 1 cut(s) 822
MluCI AATT 2 cut(s) 1195, 1245
MluNI TGGCCA 1 cut(s) 822
MlyI GAGTC 2 cut(s) 59, 496
MmeI TCCRAC 1 cut(s) 1499
Mox20I TGGCCA 1 cut(s) 822
MroI TCCGGA 1 cut(s) 95
MscI TGGCCA 1 cut(s) 822
MseI TTAA 1 cut(s) 483
MslI CAYNNNNRTG 1 cut(s) 458
Msp20I TGGCCA 1 cut(s) 822
MspA1I CMGCKG 2 cut(s) 194, 839
MspI CCGG 2 cut(s) 96, 1037
MspR9I CCNGG 1 cut(s) 690
Mva1269I GAATGC 2 cut(s) 228, 1174
MvaI CCWGG 1 cut(s) 690
MvnI CGCG 1 cut(s) 1335
MwoI GCNNNNNNNGC 6 cut(s) 842, 851, 927, 1210, 1324, 1548
NdeII GATC 8 cut(s) 92, 242, 534, 614, 748, 1136, 1350, 1484
NheI GCTAGC 1 cut(s) 136
NlaIII CATG 6 cut(s) 20, 241, 457, 463, 679, 1419
NlaIV GGNNCC 1 cut(s) 681
NmuCI GTSAC 1 cut(s) 51
NspI RCATGY 1 cut(s) 463
PaeI GCATGC 1 cut(s) 463
PagI TCATGA 1 cut(s) 237
PciSI GCTCTTC 1 cut(s) 1203
PctI GAATGC 2 cut(s) 228, 1174
PfeI GAWTC 7 cut(s) 99, 266, 391, 968, 1031, 1100, 1183
PflMI CCANNNNNTGG 1 cut(s) 1481
PkrI GCNGC 9 cut(s) 193, 196, 701, 838, 841, 844, 929, 1160, 1553
PleI GAGTC 2 cut(s) 58, 496
PpsI GAGTC 2 cut(s) 58, 496
PpuMI RGGWCCY 2 cut(s) 488, 1436
Psp5II RGGWCCY 2 cut(s) 488, 1436
Psp6I CCWGG 1 cut(s) 688
PspGI CCWGG 1 cut(s) 688
PspN4I GGNNCC 1 cut(s) 681
PspPI GGNCC 3 cut(s) 488, 679, 1436
PspPPI RGGWCCY 2 cut(s) 488, 1436
PsuI RGATCY 4 cut(s) 92, 242, 614, 1484
PvuII CAGCTG 1 cut(s) 194
RsaI GTAC 3 cut(s) 545, 1452, 1462
RsaNI GTAC 3 cut(s) 544, 1451, 1461
RseI CAYNNNNRTG 1 cut(s) 458
SapI GCTCTTC 1 cut(s) 1203
SaqAI TTAA 1 cut(s) 483
SatI GCNGC 9 cut(s) 192, 195, 700, 837, 840, 843, 928, 1159, 1552
Sau3AI GATC 8 cut(s) 92, 242, 534, 614, 748, 1136, 1350, 1484
Sau96I GGNCC 3 cut(s) 488, 679, 1436
ScaI AGTACT 1 cut(s) 1452
SchI GAGTC 2 cut(s) 59, 496
ScrFI CCNGG 1 cut(s) 690
SduI GDGCHC 1 cut(s) 731
SfaNI GCATC 4 cut(s) 686, 854, 923, 1265
SfcI CTRYAG 2 cut(s) 963, 1494
SinI GGWCC 3 cut(s) 488, 679, 1436
SmiMI CAYNNNNRTG 1 cut(s) 458
SmlI CTYRAG 2 cut(s) 730, 1296
SmoI CTYRAG 2 cut(s) 730, 1296
SpeI ACTAGT 1 cut(s) 35
SphI GCATGC 1 cut(s) 463
Sse9I AATT 2 cut(s) 1195, 1245
SspMI CTAG 6 cut(s) 36, 137, 153, 573, 627, 1442
StyD4I CCNGG 1 cut(s) 688
StyI CCWWGG 2 cut(s) 223, 1026
TaaI ACNGT 4 cut(s) 761, 1012, 1384, 1460
TaqI TCGA 3 cut(s) 995, 1349, 1374
TasI AATT 2 cut(s) 1195, 1245
TatI WGTACW 3 cut(s) 543, 1450, 1460
TauI GCSGC 2 cut(s) 702, 839
TfiI GAWTC 7 cut(s) 99, 266, 391, 968, 1031, 1100, 1183
Tru1I TTAA 1 cut(s) 483
Tru9I TTAA 1 cut(s) 483
TseFI GTSAC 1 cut(s) 51
TseI GCWGC 7 cut(s) 191, 194, 839, 842, 927, 1158, 1551
Tsp45I GTSAC 1 cut(s) 51
TspDTI ATGAA 7 cut(s) 5, 57, 91, 464, 1034, 1377, 1583
TspGWI ACGGA 2 cut(s) 627, 1534
Van91I CCANNNNNTGG 1 cut(s) 1481
VpaK11BI GGWCC 3 cut(s) 488, 679, 1436
XagI CCTNNNNNAGG 1 cut(s) 687
XceI RCATGY 1 cut(s) 463
XspI CTAG 6 cut(s) 36, 137, 153, 573, 627, 1442
ZrmI AGTACT 1 cut(s) 1452
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.