Rorug06G0377100

Growth-regulating factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001679
Physical Location & Seq
Reverse (-)
52340976 .. 52345754
4779 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0377100.1

Sequence Viewer

Length: 2979 bp
ATGGTGGCATGTTGCCAGGTGGCCATCGCCGTCGATATGAGCCGCTGTGCCGCTTCACCTCCCAATCTGTGCCCCCTCCAGTTCTCAGGTAGCCCCGCCAAGCTATTCGGATTCGGGTTCGACATTCAGAAGAAGAGGCGGCTCAAGTTCGTCGTCAGTGCGGAGCTGTCCAAGCCATTCTCTCTCAGTTTCGGCTTGGACTCTCAGGGCTATCAGCTTCATGATCCGTCGCAGTCGCGGAGGATTGGCCCTGTTCCTGGGGATATTGCAGAAATTGAAGCCTATTGTAGAATTTTTCGAAGTGCTGAACGACTACATACTGCATTGATGGAGACCTTGTGCAATCCGGTGACCGGAGTATGCAGTGTTTATTATGACTTCCCATCGGAGGAAAAGCCGCTCTTGGAGGATAAGATTGTGTCTGTGATTGGTTGCATGATGTCACTGTTGAACAAAGCAAGGGAGGATGTGCTTTCGGGAAGATCAGCCATTATGAGCTCCTTTCGGGGAGTTGTGGATGTCGGTGTGGTGGAGGAGGACATGCTTCCTCCGCTTGCTGTTTTCAGGAGTGAGCTGAAGAGGTGCTGCGAGAGCTTGCACGTTGCGCTTGAGGACTGGTTGATGCCTGGGGATGAGCAGAGCTTGGATGTGTGGAGGAAACTTCAGAGGCTGAAGAATGTGTGTTATGACTCCGGTTTTCCACGCGAGGAGGATTATCCGTGCAATACGCTTTTTGCTAATTGGACTCCTGTTTACTTATCCTCTTCTAAAGAGGATGTTAGGTCCGAAGATTCGGAGGTAGCGTTTTGGAGGGGTGGCCAGGTAACAGAAGAAGGTCTGGAGTGGTTACTGGAGAGAGGATTTAAAACTATTGTTGATCTTAGGGCAGAGATTGTAAAAGACAATATTTATCAGGCAGCCGTGGATGATGCTATTGCATCAGGGAAGGTGGAATTGATCAGAATTCCACTTGAAGTTGGGACTGCACCTTCAATGGAGCAGGTTGAGAAATTAGCAAGTTTGGTTTCAGATTGCAGCAAAAAGCCAATCTATCTTCATAGCAAGGAAGGTCTCTGGAGAACATCTGCCATGGTTTCCAGATGGAGGCAGCACTTGACTCGCCGTGCTGTTCAGTTTGTCTCCAAGCAGTCGGTTTCTCTTAATGGAGAAGTTGAAAAACCCTCAACTATGCAGAAAAGTTCCCTCCTTGAAAAGAAGAATGAGTCACTGGACACAATTCATGGTTCAAATGGGGTGCTACAAAAAAATGATTCTGTAGACAGGGATGAAGCAAATCTAAATGGGACCTGCAACAGCCTTATATCTATCCAAGGTTTGAGATCAGTTGAATCAGATGAAAGTGAACCTTTGGTGAACTTCTGCAGGGAAGTTGACCCCCTAAATGCTCAGGTTCCTCCTTGCAATATTTTCTCAAGAAAAGAAATGTCCAGGTTTCTTGAGAGAAAAAATATTGCACCACTCACTTACTTTAATTATCAGTTAAATAGGTTGAAGGTATTACCAATTTCCAGGTATATGAATACTAAGATAATGTGGAGAGGTGAGATTGTTGATACTGATCCAGTGCGGGAGGTTGTGGAGGCAGAAAATTCCAATGAGATACCTGATGCAAAACATCTGCTTCCAGAGTTCCAGATCTCTGCTTCTGGCAATGGGAAGTATTTGACCGGTGTTGGTAATGGTTCTGTAACTGCAGTTGTAAATGGATTTGGTGAAGGGGAGAAAGGTTCCTTGTTAGCCGCTAATTTATCTACTAACGCGAGCAACAATCATTCTAAAGCAGTGAAGGAGGAAAGGAAGAGTAATGGTAGAGCCCCTTTAGTTTCAAGTGATGATGAATTGGGATCAATTGAAGGAGATATGTGTGCTTCTGCAACTGGGGTTGTAAGGGTGCAGTCAAGAAAGAAAGCAGAGATGTTTTTAGTACGAACAGATGGATTCTCTTGTACCCGAGAAAAAGTGACAGAATCCTCCCTGGCCTTCACTCATCCAAGTACTCAGCAACAAATGCTTATGTGGAAATCTACACCAAAGACAGTATTAGTGTTAAAGAAGCTTGGGCATGAGCTTATGGAACAAGCTAAAGAGGTTGTCTCCTTCTTGTATTACCAAGAGAAAATGAATGTTCTGGTGGAACCTGACGTGCATGATGTATTTGCTAGAATCCCAGGTTTTGGATTTGTTCAGACCTTCTACACCCAAGATACCGGTGATCTGCATGAGAGGGTTGATTTTGTGGCATGTCTGGGAGGGGATGGGGTAATACTCCATGCTTCAAATCTATTCAAAGGTGCTGTTCCCCCCATCGTATCATTTAATCTTGGATCACTTGGATTTTTGACTTCCCATACTTTTGATGACTACAGGCAGGACTTAAGACAGGTTATCCATGGAAATAACACAAGTGATGGTGTTTATATAACTCTCAGAATGCGTCTCAGGTGTGAAATTTTTCGAAATGGTAAAGCGATGCCTGGAAAGGTATTTGATGTTTTGAATGAAATAGTTGTTGATCGAGGTTCGAATCCGTACCTTTCTAAGATTGAATGTTATGAACGTGACCAGCTTATAACCAAGGTCCAAGGTGATGGTGTCATTGTAGCCACACCTACAGGAAGTACTGCTTATTCTACAGCTGCAGGAGGTTCCATGGTGCATCCAAATGTTCCTTGCATGTTATTTACGCCAATCTGCCCACACTCCCTCTCATTTAGACCAGTTATACTTCCAGATTCTGCAAGCCTTGAATTAAAGATTCCAGAGGATGCTCGAAGCAATGCCTGGGTTTCTTTTGATGGGAAGAGAAGGCAGCAGCTCTCAAGGGGAGACTCTGTTCGAATAGCTATGAGCCAACACCCACTTCCAACAGTCAACAAGCGTGACCAAACAGGGGACTGGTTTCGAAGCTTGATTCGTTGCCTAAATTGGAATGAGAGGCTAGATCAAAAGGCCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
QLQ WRC

Protein Analysis

992

Amino Acids

110.53

Weight (kDa)

6.08

Isoelectric Point (pI)

43.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTP-NADK PF22741 240 - 386 2.6e-63 DSP-PTPase phosphatase fused to NAD+ Kinase
Tc-R-P PF22785 274 - 368 5.3e-10 Polymorphic toxin system, DSP-PTPase phosphatase
NAD_kinase PF01513 695 - 805 4.7e-15 ATP-NAD kinase N-terminal domain
NAD_kinase_C PF20143 839 - 965 6.4e-35 ATP-NAD kinase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2591
Acc36I ACCTGC 2 cut(s) 991, 1316
AccB7I CCANNNNNTGG 1 cut(s) 2195
AccBSI CCGCTC 1 cut(s) 400
AccI GTMKAC 1 cut(s) 1278
AccII CGCG 3 cut(s) 238, 705, 1781
AclWI GGATC 4 cut(s) 218, 1574, 1873, 2353
AcoI YGGCCR 2 cut(s) 21, 817
AcsI RAATTY 4 cut(s) 291, 963, 1609, 2469
AcuI CTGAAG 3 cut(s) 596, 647, 692
AfaI GTAC 5 cut(s) 1947, 1969, 2017, 2552, 2641
AfiI CCNNNNNNNGG 6 cut(s) 257, 353, 388, 1104, 2195, 2911
AflII CTTAAG 1 cut(s) 2395
AgeI ACCGGT 2 cut(s) 1688, 2228
AjiI CACGTC 1 cut(s) 2164
AjuI GAANNNNNNNTTGG 2 cut(s) 2865, 2897
AloI GAACNNNNNNTCC 2 cut(s) 2838, 2870
Alw21I GWGCWC 1 cut(s) 500
Alw26I GTCTC 6 cut(s) 326, 1076, 1144, 2119, 2462, 2841
AlwI GGATC 4 cut(s) 218, 1574, 1873, 2353
AlwNI CAGNNNCTG 2 cut(s) 670, 2756
Ama87I CYCGRG 1 cut(s) 1971
AoxI GGCC 5 cut(s) 21, 247, 817, 1998, 2970
ApeKI GCWGC 7 cut(s) 585, 917, 1035, 1108, 2657, 2830, 2833
ApoI RAATTY 4 cut(s) 291, 963, 1609, 2469
AsiGI ACCGGT 2 cut(s) 1688, 2228
Asp700I GAANNNNTTC 1 cut(s) 2472
AspLEI GCGC 1 cut(s) 607
AspS9I GGNCC 5 cut(s) 248, 783, 1305, 2599, 2971
AsuHPI GGTGA 7 cut(s) 48, 361, 1384, 1574, 1745, 2243, 2618
AsuII TTCGAA 5 cut(s) 298, 2476, 2543, 2857, 2923
AvaI CYCGRG 1 cut(s) 1971
AvaII GGWCC 3 cut(s) 783, 1305, 2599
BaeGI GKGCMC 1 cut(s) 74
BalI TGGCCA 2 cut(s) 23, 819
BanII GRGCYC 2 cut(s) 500, 1837
Bbv12I GWGCWC 1 cut(s) 500
BbvI GCAGC 7 cut(s) 572, 929, 1047, 1120, 2644, 2842, 2845
BceAI ACGGC 3 cut(s) 14, 905, 1107
BcgI CGANNNNNNTGC 2 cut(s) 1100, 1134
BclI TGATCA 1 cut(s) 957
BcoDI GTCTC 6 cut(s) 326, 1076, 1144, 2119, 2462, 2841
BfaI CTAG 2 cut(s) 2181, 2960
BfmI CTRYAG 7 cut(s) 1275, 1381, 1713, 2383, 2631, 2652, 2658
BfrI CTTAAG 1 cut(s) 2395
BfuAI ACCTGC 2 cut(s) 991, 1316
BglII AGATCT 1 cut(s) 1656
BmcAI AGTACT 2 cut(s) 2017, 2641
Bme18I GGWCC 3 cut(s) 783, 1305, 2599
BmeT110I CYCGRG 1 cut(s) 1971
BmgBI CACGTC 1 cut(s) 2164
BmgT120I GGNCC 5 cut(s) 248, 783, 1305, 2599, 2971
BmiI GGNNCC 5 cut(s) 1306, 1413, 1750, 2157, 2668
BmrI ACTGGG 1 cut(s) 1908
BmsI GCATC 7 cut(s) 612, 919, 947, 1618, 2481, 2686, 2776
BmuI ACTGGG 1 cut(s) 1908
BplI GAGNNNNNCTC 2 cut(s) 2099, 2131
BpmI CTGGAG 4 cut(s) 62, 860, 872, 1096
Bpu10I CCTNAGC 1 cut(s) 1407
Bpu14I TTCGAA 5 cut(s) 298, 2476, 2543, 2857, 2923
BpuEI CTTGAG 5 cut(s) 128, 629, 1417, 1478, 2824
BsaBI GATNNNNATC 1 cut(s) 1578
BsaI GGTCTC 2 cut(s) 326, 1076
BsaWI WCCGGW 5 cut(s) 346, 353, 692, 1688, 2228
BsaXI ACNNNNNCTCC 6 cut(s) 323, 353, 788, 818, 2838, 2868
Bsc4I CCNNNNNNNGG 6 cut(s) 257, 353, 388, 1104, 2195, 2911
Bse118I RCCGGY 2 cut(s) 1688, 2228
Bse1I ACTGG 8 cut(s) 79, 620, 855, 1233, 1583, 1903, 2738, 2921
Bse3DI GCAATG 2 cut(s) 1678, 2803
Bse8I GATNNNNATC 1 cut(s) 1578
BseJI GATNNNNATC 1 cut(s) 1578
BseLI CCNNNNNNNGG 6 cut(s) 257, 353, 388, 1104, 2195, 2911
BseMI GCAATG 2 cut(s) 1678, 2803
BseMII CTCAG 7 cut(s) 99, 199, 218, 1421, 2033, 2461, 2473
BseNI ACTGG 8 cut(s) 79, 620, 855, 1233, 1583, 1903, 2738, 2921
BseRI GAGGAG 2 cut(s) 548, 722
BseSI GKGCMC 1 cut(s) 74
BseXI GCAGC 7 cut(s) 572, 929, 1047, 1120, 2644, 2842, 2845
BsgI GTGCAG 2 cut(s) 969, 1934
Bsh1236I CGCG 3 cut(s) 238, 705, 1781
BshFI GGCC 5 cut(s) 23, 249, 819, 2000, 2972
BshTI ACCGGT 2 cut(s) 1688, 2228
BsiHKAI GWGCWC 1 cut(s) 500
BsiHKCI CYCGRG 1 cut(s) 1971
BsiSI CCGG 5 cut(s) 347, 354, 693, 1689, 2229
BslFI GGGAC 3 cut(s) 994, 1318, 2927
BslI CCNNNNNNNGG 6 cut(s) 257, 353, 388, 1104, 2195, 2911
BsmAI GTCTC 6 cut(s) 326, 1076, 1144, 2119, 2462, 2841
BsmBI CGTCTC 1 cut(s) 2462
BsmFI GGGAC 3 cut(s) 994, 1318, 2927
BsmI GAATGC 1 cut(s) 2457
BsnI GGCC 5 cut(s) 23, 249, 819, 2000, 2972
Bso31I GGTCTC 2 cut(s) 326, 1076
BsoBI CYCGRG 1 cut(s) 1971
Bsp119I TTCGAA 5 cut(s) 298, 2476, 2543, 2857, 2923
Bsp1286I GDGCHC 3 cut(s) 74, 500, 1837
Bsp19I CCATGG 3 cut(s) 1089, 2410, 2670
BspANI GGCC 5 cut(s) 23, 249, 819, 2000, 2972
BspCNI CTCAG 7 cut(s) 98, 198, 217, 1420, 2032, 2460, 2472
BspFNI CGCG 3 cut(s) 238, 705, 1781
BspHI TCATGA 1 cut(s) 220
BspLI GGNNCC 5 cut(s) 1306, 1413, 1750, 2157, 2668
BspMAI CTGCAG 3 cut(s) 1385, 1717, 2662
BspMI ACCTGC 2 cut(s) 991, 1316
BspPI GGATC 4 cut(s) 218, 1574, 1873, 2353
BspT104I TTCGAA 5 cut(s) 298, 2476, 2543, 2857, 2923
BspTI CTTAAG 1 cut(s) 2395
BspTNI GGTCTC 2 cut(s) 326, 1076
BsrBI CCGCTC 1 cut(s) 400
BsrDI GCAATG 2 cut(s) 1678, 2803
BsrFI RCCGGY 2 cut(s) 1688, 2228
BsrI ACTGG 8 cut(s) 79, 620, 855, 1233, 1583, 1903, 2738, 2921
BssAI RCCGGY 2 cut(s) 1688, 2228
BssT1I CCWWGG 6 cut(s) 1089, 1330, 2410, 2595, 2602, 2670
Bst4CI ACNGT 3 cut(s) 447, 2059, 2890
Bst6I CTCTTC 5 cut(s) 128, 572, 769, 1814, 2816
BstAFI CTTAAG 1 cut(s) 2395
BstAPI GCANNNNNTGC 1 cut(s) 2029
BstBI TTCGAA 5 cut(s) 298, 2476, 2543, 2857, 2923
BstC8I GCNNGC 4 cut(s) 555, 596, 1783, 2761
BstDSI CCRYGG 4 cut(s) 921, 1089, 2410, 2670
BstEII GGTNACC 1 cut(s) 349
BstFNI CGCG 3 cut(s) 238, 705, 1781
BstHHI GCGC 1 cut(s) 607
BstMAI GTCTC 6 cut(s) 326, 1076, 1144, 2119, 2462, 2841
BstMWI GCNNNNNNNGC 5 cut(s) 172, 550, 591, 604, 2029
BstNSI RCATGY 4 cut(s) 12, 544, 2265, 2698
BstPI GGTNACC 1 cut(s) 349
BstSFI CTRYAG 7 cut(s) 1275, 1381, 1713, 2383, 2631, 2652, 2658
BstSLI GKGCMC 1 cut(s) 74
BstUI CGCG 3 cut(s) 238, 705, 1781
BstV1I GCAGC 7 cut(s) 572, 929, 1047, 1120, 2644, 2842, 2845
BstX2I RGATCY 1 cut(s) 1656
BstXI CCANNNNNNTGG 1 cut(s) 2609
BstYI RGATCY 1 cut(s) 1656
BsuRI GGCC 5 cut(s) 23, 249, 819, 2000, 2972
BtgI CCRYGG 4 cut(s) 921, 1089, 2410, 2670
BtgZI GCGATG 2 cut(s) 10, 2504
BtrI CACGTC 1 cut(s) 2164
BtsI GCAGTG 2 cut(s) 370, 1809
BtsIMutI CAGTG 6 cut(s) 163, 370, 443, 1226, 1590, 1809
BveI ACCTGC 2 cut(s) 991, 1316
Cac8I GCNNGC 4 cut(s) 555, 596, 1783, 2761
CaiI CAGNNNCTG 2 cut(s) 670, 2756
CciI TCATGA 1 cut(s) 220
CfoI GCGC 1 cut(s) 607
Cfr10I RCCGGY 2 cut(s) 1688, 2228
Cfr13I GGNCC 5 cut(s) 248, 783, 1305, 2599, 2971
CseI GACGC 1 cut(s) 2444
Csp6I GTAC 5 cut(s) 1946, 1968, 2016, 2551, 2640
CspAI ACCGGT 2 cut(s) 1688, 2228
CviQI GTAC 5 cut(s) 1946, 1968, 2016, 2551, 2640
DraI TTTAAA 1 cut(s) 865
EaeI YGGCCR 2 cut(s) 21, 817
Eam1104I CTCTTC 5 cut(s) 128, 572, 769, 1814, 2816
EarI CTCTTC 5 cut(s) 128, 572, 769, 1814, 2816
Ecl136II GAGCTC 1 cut(s) 498
Eco130I CCWWGG 6 cut(s) 1089, 1330, 2410, 2595, 2602, 2670
Eco24I GRGCYC 2 cut(s) 500, 1837
Eco31I GGTCTC 2 cut(s) 326, 1076
Eco47I GGWCC 3 cut(s) 783, 1305, 2599
Eco53kI GAGCTC 1 cut(s) 498
Eco57I CTGAAG 3 cut(s) 596, 647, 692
Eco88I CYCGRG 1 cut(s) 1971
Eco91I GGTNACC 1 cut(s) 349
EcoICRI GAGCTC 1 cut(s) 498
EcoO109I RGGNCCY 2 cut(s) 1305, 2971
EcoO65I GGTNACC 1 cut(s) 349
EcoRI GAATTC 1 cut(s) 963
EcoT14I CCWWGG 6 cut(s) 1089, 1330, 2410, 2595, 2602, 2670
EcoT38I GRGCYC 2 cut(s) 500, 1837
ErhI CCWWGG 6 cut(s) 1089, 1330, 2410, 2595, 2602, 2670
Esp3I CGTCTC 1 cut(s) 2462
FalI AAGNNNNNCTT 6 cut(s) 386, 418, 1351, 1383, 2629, 2661
FaqI GGGAC 3 cut(s) 994, 1318, 2927
FauI CCCGC 2 cut(s) 103, 1581
FbaI TGATCA 1 cut(s) 957
FblI GTMKAC 1 cut(s) 1278
FriOI GRGCYC 2 cut(s) 500, 1837
FspBI CTAG 2 cut(s) 2181, 2960
GlaI GCGC 1 cut(s) 606
GsuI CTGGAG 4 cut(s) 62, 860, 872, 1096
HaeIII GGCC 5 cut(s) 23, 249, 819, 2000, 2972
HapII CCGG 5 cut(s) 347, 354, 693, 1689, 2229
HgaI GACGC 1 cut(s) 2444
HhaI GCGC 1 cut(s) 607
Hin6I GCGC 1 cut(s) 605
HinP1I GCGC 1 cut(s) 605
HincII GTYRAC 2 cut(s) 1393, 2893
HindII GTYRAC 2 cut(s) 1393, 2893
HindIII AAGCTT 2 cut(s) 2075, 2926
HpaII CCGG 5 cut(s) 347, 354, 693, 1689, 2229
HphI GGTGA 7 cut(s) 48, 361, 1384, 1574, 1745, 2243, 2618
Hpy166II GTNNAC 6 cut(s) 754, 1279, 1364, 1375, 1393, 2893
Hpy8I GTNNAC 6 cut(s) 754, 1279, 1364, 1375, 1393, 2893
Hpy99I CGWCG 3 cut(s) 35, 155, 232
HpyCH4III ACNGT 3 cut(s) 447, 2059, 2890
HpyCH4IV ACGT 3 cut(s) 600, 2163, 2578
HpyF10VI GCNNNNNNNGC 5 cut(s) 172, 550, 591, 604, 2029
HpySE526I ACGT 3 cut(s) 600, 2163, 2578
HspAI GCGC 1 cut(s) 605
Ksp22I TGATCA 1 cut(s) 957
LmnI GCTCC 3 cut(s) 163, 503, 997
Lsp1109I GCAGC 7 cut(s) 572, 929, 1047, 1120, 2644, 2842, 2845
LweI GCATC 7 cut(s) 612, 919, 947, 1618, 2481, 2686, 2776
MaeI CTAG 2 cut(s) 2181, 2960
MaeII ACGT 3 cut(s) 600, 2163, 2578
MaeIII GTNAC 9 cut(s) 349, 441, 823, 846, 1224, 1708, 1981, 2579, 2900
MbiI CCGCTC 1 cut(s) 400
MfeI CAATTG 1 cut(s) 1869
MflI RGATCY 1 cut(s) 1656
MhlI GDGCHC 3 cut(s) 74, 500, 1837
MlsI TGGCCA 2 cut(s) 23, 819
MluNI TGGCCA 2 cut(s) 23, 819
MlyI GAGTC 6 cut(s) 194, 683, 739, 1111, 1232, 2843
MmeI TCCRAC 1 cut(s) 2909
Mox20I TGGCCA 2 cut(s) 23, 819
MroXI GAANNNNTTC 1 cut(s) 2472
MscI TGGCCA 2 cut(s) 23, 819
MseI TTAA 8 cut(s) 864, 1161, 1491, 1502, 2069, 2337, 2396, 2771
MslI CAYNNNNRTG 1 cut(s) 2682
Msp20I TGGCCA 2 cut(s) 23, 819
MspA1I CMGCKG 2 cut(s) 45, 2657
MspCI CTTAAG 1 cut(s) 2395
MspI CCGG 5 cut(s) 347, 354, 693, 1689, 2229
MunI CAATTG 1 cut(s) 1869
Mva1269I GAATGC 1 cut(s) 2457
MvnI CGCG 3 cut(s) 238, 705, 1781
MwoI GCNNNNNNNGC 5 cut(s) 172, 550, 591, 604, 2029
NcoI CCATGG 3 cut(s) 1089, 2410, 2670
NlaIV GGNNCC 5 cut(s) 1306, 1413, 1750, 2157, 2668
NmuCI GTSAC 6 cut(s) 349, 441, 1224, 1981, 2579, 2900
NspI RCATGY 4 cut(s) 12, 544, 2265, 2698
NspV TTCGAA 5 cut(s) 298, 2476, 2543, 2857, 2923
PagI TCATGA 1 cut(s) 220
PcsI WCGNNNNNNNCGW 1 cut(s) 800
PctI GAATGC 1 cut(s) 2457
PdmI GAANNNNTTC 1 cut(s) 2472
PflMI CCANNNNNTGG 1 cut(s) 2195
PinAI ACCGGT 2 cut(s) 1688, 2228
PleI GAGTC 6 cut(s) 194, 683, 739, 1111, 1231, 2843
PpsI GAGTC 6 cut(s) 194, 683, 739, 1111, 1231, 2843
PpuMI RGGWCCY 1 cut(s) 1305
PsiI TTATAA 1 cut(s) 2591
Psp124BI GAGCTC 1 cut(s) 500
Psp5II RGGWCCY 1 cut(s) 1305
PspEI GGTNACC 1 cut(s) 349
PspN4I GGNNCC 5 cut(s) 1306, 1413, 1750, 2157, 2668
PspPI GGNCC 5 cut(s) 248, 783, 1305, 2599, 2971
PspPPI RGGWCCY 1 cut(s) 1305
PstI CTGCAG 3 cut(s) 1385, 1717, 2662
PstNI CAGNNNCTG 2 cut(s) 670, 2756
PsuI RGATCY 1 cut(s) 1656
PvuII CAGCTG 1 cut(s) 2657
RsaI GTAC 5 cut(s) 1947, 1969, 2017, 2552, 2641
RsaNI GTAC 5 cut(s) 1946, 1968, 2016, 2551, 2640
RseI CAYNNNNRTG 1 cut(s) 2682
SacI GAGCTC 1 cut(s) 500
SaqAI TTAA 8 cut(s) 864, 1161, 1491, 1502, 2069, 2337, 2396, 2771
Sau96I GGNCC 5 cut(s) 248, 783, 1305, 2599, 2971
ScaI AGTACT 2 cut(s) 2017, 2641
SchI GAGTC 6 cut(s) 194, 683, 739, 1111, 1232, 2843
SduI GDGCHC 3 cut(s) 74, 500, 1837
SfaNI GCATC 7 cut(s) 612, 919, 947, 1618, 2481, 2686, 2776
SfcI CTRYAG 7 cut(s) 1275, 1381, 1713, 2383, 2631, 2652, 2658
SfuI TTCGAA 5 cut(s) 298, 2476, 2543, 2857, 2923
SinI GGWCC 3 cut(s) 783, 1305, 2599
SmiMI CAYNNNNRTG 1 cut(s) 2682
SmlI CTYRAG 6 cut(s) 143, 608, 1432, 1457, 2395, 2839
SmoI CTYRAG 6 cut(s) 143, 608, 1432, 1457, 2395, 2839
SspI AATATT 3 cut(s) 907, 1426, 1471
SspMI CTAG 2 cut(s) 2181, 2960
SstI GAGCTC 1 cut(s) 500
StyI CCWWGG 6 cut(s) 1089, 1330, 2410, 2595, 2602, 2670
TaaI ACNGT 3 cut(s) 447, 2059, 2890
TaiI ACGT 3 cut(s) 603, 2166, 2581
TaqI TCGA 9 cut(s) 33, 120, 298, 2476, 2536, 2543, 2791, 2857, 2923
TatI WGTACW 2 cut(s) 2015, 2639
TauI GCSGC 5 cut(s) 45, 53, 142, 400, 1763
Tru1I TTAA 8 cut(s) 864, 1161, 1491, 1502, 2069, 2337, 2396, 2771
Tru9I TTAA 8 cut(s) 864, 1161, 1491, 1502, 2069, 2337, 2396, 2771
TscAI CASTG 6 cut(s) 163, 370, 450, 1233, 1590, 1809
TseFI GTSAC 6 cut(s) 349, 441, 1224, 1981, 2579, 2900
TseI GCWGC 7 cut(s) 585, 917, 1035, 1108, 2657, 2830, 2833
Tsp45I GTSAC 6 cut(s) 349, 441, 1224, 1981, 2579, 2900
TspGWI ACGGA 3 cut(s) 216, 708, 2538
TspRI CASTG 6 cut(s) 163, 370, 450, 1233, 1590, 1809
Van91I CCANNNNNTGG 1 cut(s) 2195
Vha464I CTTAAG 1 cut(s) 2395
VpaK11BI GGWCC 3 cut(s) 783, 1305, 2599
XapI RAATTY 4 cut(s) 291, 963, 1609, 2469
XceI RCATGY 4 cut(s) 12, 544, 2265, 2698
XmiI GTMKAC 1 cut(s) 1278
XmnI GAANNNNTTC 1 cut(s) 2472
XspI CTAG 2 cut(s) 2181, 2960
ZrmI AGTACT 2 cut(s) 2017, 2641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.