Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0001679

Physical Location & Seq

Genomic Coordinates Reverse (-)

66072838 .. 66080889

Gene Structure 8052 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G042700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGCTGCAGCTCAACACTGGTATGATGAGGACTAATTCCACCAACTTTGACGGGCAGCAGTTACTGAGCTTCTCTAGCTCATCCAAATTAGAAGCTCAAAATGCCTCATTGCCTAGCTACTTTCAACAAGCAGTGTCTGCTTACCATAGAAATTCAGGTAACAACCATAGTGGGAGCTTAAATGGGGCTACAGTGCATTGGACTATAGCAGGAGGCAGAGGACCATTCACTCCTTCACAATGGATGGAGCTAGAACACCAGGCCTTGATCTACAAATACATCACTGCAAATGTACCTATACCATCTAATCTGCTCATCCCAATAAAAAAGGCCTTGGATTCTGCTGGGTTATTTTCACCAGGACTCAGATCCAATACATTGGGATGGGGTTCTATCCATTTGGGATACTCCAACAGTACCGATCCTGAGCCAGGGAGGTGCCGTAGGACAGATGGGAAGAAATGGCGGTGTTGGAGAGACGCTGTACCTGACCAAAAATATTGTGAGCGGCACATCAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGTCAAACCGGCCAGTCCGTTACCGGTACCGCCACCCCCACCCCCACTGCCTCAAAGCAGCTTATGCCTGGTGGAGGTGGAACCAGCAACCTCGCTATTGCCAACCAACAGCTCAAGAGTTTGCAGCCCGCTGCTGCTGCATCTAATTCTTCTGCACCCACTCAGATGAGCAGGATGTTCATGAACAAAGATAGTGCGAGTGAGAGAATGCAACATTCTCCAAACCTCTCCATGTTGTCCAAGGAAAACACATTCTTGAATCAGAAACAGCAACTCGGGCTTGAGGAATCCTCAAGATCTGAGTTTGGGCTGGTCACCTCTGATGCCCTCCTCAACCCTTCACAGAAAAGGTCCTCGAGTTCAATGATGAGCTGTGGTAACTTTGGTGCTGTTCAAGAGACAGATTCACAACATTCCCTTCGCCACTTCATTGATGATTGGCCTAAAAACCCATCTGATCACCCAGCTATTGTTGCCTGGCCTGACCAACTCGATATCCAATCAGACAGGACTCAGTTATCCATTTCCATCCCCAAGACAGGTTCCTCGGACTTTATACCATCCACTTCCTCTACCAACAATGGGAAGCTCACTTTCTCCCCACTCAGAATGTCTCATGAGCTTAACTCAGTTCCAGTGGGTTTAGGAGTAAGCAGCTGTATGGGGCAACACAAGAAACAAGCAAACTGGATTCCAATCACCTGGGAGCCTTCAGTTGGTGGTCCTCTGGGAGAGGTTCTGCACCATACCAATATCAATGCAGCAGAATGCAAGAAGTCTTCAGTGCTTAACCTTATGACCGAGGGCTGGGATAACAACAGTCCTCCATCTTTAGGGTCTTCTCCAACTGGGGTCTTGCAGAGGACTGCATTCGGGTCTGTGTCTAGCAGTGCAGGGAGTAGTCCAAGAGCAGAGAATAGGAGTACTCATGAAGGGGCTAGCCATTGCAATGAGCTTCTTATGTTTCCTGCCTTATCTGTTTACACAAAAATTCAAACGAAAATTTGGGCCAGACGCCTACAGAGTTCAAAAACAGAGACACCAGAGCAGAAGACAGAAGGAGCTACTTTGTTCCTAACCGACACATTAATTCTGCATGTCGATCAACGCACATACGCCATGATCCGGCCGAGGAGATCAACCGACGAGGTGATGTCGACGTCGTTTCGGGCAAATGTACCGTTCTCGTGGGAGAAGAAACCCGGGACGTCCAAGCTCAAACCATCTGCTTCTTCTGATCGTCGTAGTTTGGATCACTACTTCACGACCACGACGTCGTCCCTAAAGCTGATACCTCCTCCAGCTCGTCTCTCATCGCAAATTTCCATCAGTAGTACTGCTGGTAACCGGCAGACCCGTGGTGGCCCTTGTCTATGCTCCAGTGTTGATGTTCAGCCATCTGTTGCTACTTTTCGAAACCCATTCGGATTAACGGGTGGTGCTAGTCCTACTACTGCTAAAAATAATCGTCTTCAAGAAGACCCATTTCTTGCAGCTTTCATCAAATGCACCCAGATGCACGGCCCCAGAGTCACTAATAGTGGCAAAAGGTATGCAGCTGATAGTAAACATTATGCAGCAGCTGGGTTTTCTGCCGGGAAGAAAACCACCCTGTTCTCGATGTTTACTAGTAGTTTCTCATGTCAGTACTCCTCCGCTGTTAGGGACGACAATATTGTAGTTGCAAGGCCACGCAAATCTCCCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

QLQ WRC

Protein Analysis

753

Amino Acids

81.95

Weight (kDa)

9.74

Isoelectric Point (pI)

54.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
QLQ	PF08880	75 - 108	1.5e-15	QLQ
WRC	PF08879	142 - 184	3.4e-20	WRC

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001679)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22840 AT4G37740
fragaria_vesca	FvH4_1g18220 FvH4_2g32670 FvH4_2g32670 FvH4_2g32670 FvH4_2g32671
malus_domestica	MD02G1189500.v1.1 MD04G1215900.v1.1 MD15G1065000.v1.1 MD15G1300900.v1.1
prunus_persica	Prupe.1G419000_v2.0.a1 Prupe.1G419000_v2.0.a1 Prupe.1G419200_v2.0.a1 Prupe.6G217000_v2.0.a1
pyrus_communis	pycom02g15360 pycom08g06450 pycom15g26320
rosa_chinensis	RchiOBHm_Chr2g0108741 RchiOBHm_Chr6g0310031 RchiOBHm_Chr6g0310051
rosa_laevigata	RLG00000010515 RLG00000010516 RLG00000017688
rosa_multiflora	Rmu_sc0000294.1_g000016 Rmu_sc0010317.1_g000012
rosa_roxburghii	Rroxscaffold_2G00134850 Rroxscaffold_7G00158930 Rroxscaffold_7G00158940
rosa_rugosa	Rorug02G0155400 Rorug02G0155400 Rorug06G0377000 Rorug06G0377100 Rorug06G0377100 Rorug06G0377200
rosa_samantha	Rh2AG205600 Rh2BG217300 Rh2CG208500 Rh2DG211800 Rh6AG490600 Rh6AG490700 Rh6BG500100 Rh6BG500200 Rh6CG505000 Rh6CG505100 Rh6DG491000 Rh6DG491100
rosa_wichuraiana	Rw2G016360 Rw6G042700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1825
AatII	GACGTC	3 cut(s)	1715, 1763, 1829
Acc65I	GGTACC	1 cut(s)	578
AccB1I	GGYRCC	2 cut(s)	438, 578
AccBSI	CCGCTC	1 cut(s)	508
AccI	GTMKAC	1 cut(s)	1709
AciI	CCGC	6 cut(s)	466, 508, 526, 582, 681, 2208
AclWI	GGATC	4 cut(s)	363, 416, 1669, 1812
AcoI	YGGCCR	2 cut(s)	562, 1679
AcsI	RAATTY	4 cut(s)	151, 1542, 1554, 1872
AcuI	CTGAAG	2 cut(s)	1248, 1317
AcyI	GRCGYC	4 cut(s)	1567, 1712, 1760, 1826
AfaI	GTAC	8 cut(s)	294, 418, 486, 580, 1477, 1731, 1888, 2201
AgeI	ACCGGT	1 cut(s)	575
AgsI	TTSAA	8 cut(s)	125, 537, 811, 915, 947, 1547, 1581, 2027
AhlI	ACTAGT	1 cut(s)	2180
AjnI	CCWGG	6 cut(s)	258, 358, 430, 619, 1028, 1253
Alw26I	GTCTC	5 cut(s)	471, 944, 1170, 1583, 1865
AlwI	GGATC	4 cut(s)	363, 416, 1669, 1812
AlwNI	CAGNNNCTG	3 cut(s)	64, 137, 2135
Ama87I	CYCGRG	3 cut(s)	827, 907, 1754
ApoI	RAATTY	4 cut(s)	151, 1542, 1554, 1872
AseI	ATTAAT	1 cut(s)	1640
AsiGI	ACCGGT	1 cut(s)	575
Asp718I	GGTACC	1 cut(s)	578
AspS9I	GGNCC	6 cut(s)	221, 903, 1274, 1560, 1916, 2075
AsuC2I	CCSGG	3 cut(s)	1755, 1756, 2149
AsuHPI	GGTGA	5 cut(s)	348, 859, 1004, 1243, 1714
AsuII	TTCGAA	1 cut(s)	1966
AsuNHI	GCTAGC	1 cut(s)	1490
AvaI	CYCGRG	3 cut(s)	827, 907, 1754
AvaII	GGWCC	3 cut(s)	221, 903, 1274
BanI	GGYRCC	2 cut(s)	438, 578
BauI	CACGAG	1 cut(s)	1738
BbsI	GAAGAC	5 cut(s)	1323, 1383, 1610, 2015, 2037
BceAI	ACGGC	2 cut(s)	426, 2089
BciT130I	CCWGG	6 cut(s)	260, 360, 432, 621, 1030, 1255
BciVI	GTATCC	1 cut(s)	398
BclI	TGATCA	1 cut(s)	1009
BcnI	CCSGG	3 cut(s)	1755, 1756, 2149
BcoDI	GTCTC	5 cut(s)	471, 944, 1170, 1583, 1865
BcuI	ACTAGT	1 cut(s)	2180
BfaI	CTAG	7 cut(s)	75, 114, 251, 1437, 1491, 1995, 2181
BfmI	CTRYAG	4 cut(s)	5, 189, 204, 1571
BfuI	GTATCC	1 cut(s)	398
BglII	AGATCT	1 cut(s)	848
BmcAI	AGTACT	3 cut(s)	1477, 1888, 2201
Bme1390I	CCNGG	9 cut(s)	260, 360, 432, 621, 1030, 1255, 1755, 1756, 2149
Bme18I	GGWCC	3 cut(s)	221, 903, 1274
BmeT110I	CYCGRG	3 cut(s)	827, 907, 1754
BmgT120I	GGNCC	6 cut(s)	221, 903, 1274, 1560, 1916, 2075
BmiI	GGNNCC	6 cut(s)	440, 580, 634, 1096, 1260, 2077
BmrFI	CCNGG	9 cut(s)	260, 360, 432, 621, 1030, 1255, 1755, 1756, 2149
BmrI	ACTGGG	1 cut(s)	1410
BmsI	GCATC	3 cut(s)	701, 865, 2058
BmtI	GCTAGC	1 cut(s)	1494
BmuI	ACTGGG	1 cut(s)	1410
BpiI	GAAGAC	5 cut(s)	1323, 1383, 1610, 2015, 2037
BplI	GAGNNNNNCTC	4 cut(s)	827, 859, 1163, 1195
BpmI	CTGGAG	2 cut(s)	1836, 1915
Bpu10I	CCTNAGC	1 cut(s)	426
Bpu14I	TTCGAA	1 cut(s)	1966
BpuEI	CTTGAG	3 cut(s)	650, 829, 854
BpuMI	CCSGG	3 cut(s)	1755, 1756, 2149
BsaBI	GATNNNNATC	1 cut(s)	1247
BsaHI	GRCGYC	4 cut(s)	1567, 1712, 1760, 1826
BsaJI	CCNNGG	9 cut(s)	333, 431, 792, 1098, 1254, 1353, 1682, 1754, 1909
BsaWI	WCCGGW	1 cut(s)	575
BsaXI	ACNNNNNCTCC	2 cut(s)	427, 457
Bse118I	RCCGGY	3 cut(s)	560, 575, 1899
Bse1I	ACTGG	6 cut(s)	22, 565, 1187, 1244, 1405, 1932
Bse3DI	GCAATG	3 cut(s)	107, 1495, 1507
Bse8I	GATNNNNATC	1 cut(s)	1247
BseBI	CCWGG	6 cut(s)	260, 360, 432, 621, 1030, 1255
BseDI	CCNNGG	9 cut(s)	333, 431, 792, 1098, 1254, 1353, 1682, 1754, 1909
BseGI	GGATG	7 cut(s)	80, 249, 315, 389, 732, 1080, 1112
BseJI	GATNNNNATC	1 cut(s)	1247
BseMI	GCAATG	3 cut(s)	107, 1495, 1507
BseMII	CTCAG	8 cut(s)	56, 379, 417, 728, 843, 1079, 1171, 1194
BseNI	ACTGG	6 cut(s)	22, 565, 1187, 1244, 1405, 1932
BseRI	GAGGAG	4 cut(s)	872, 1699, 1839, 2194
BseX3I	CGGCCG	1 cut(s)	1679
BseYI	CCCAGC	4 cut(s)	344, 1015, 1359, 2135
BsgI	GTGCAG	3 cut(s)	690, 1277, 1464
Bsh1285I	CGRYCG	1 cut(s)	1682
BshNI	GGYRCC	2 cut(s)	438, 578
BshTI	ACCGGT	1 cut(s)	575
BsiEI	CGRYCG	1 cut(s)	1682
BsiHKCI	CYCGRG	3 cut(s)	827, 907, 1754
BsiSI	CCGG	6 cut(s)	561, 576, 1678, 1755, 1900, 2148
BslFI	GGGAC	3 cut(s)	1771, 1816, 2231
BsmAI	GTCTC	5 cut(s)	471, 944, 1170, 1583, 1865
BsmBI	CGTCTC	2 cut(s)	471, 1865
BsmFI	GGGAC	3 cut(s)	1771, 1816, 2231
BsmI	GAATGC	3 cut(s)	765, 1325, 1421
BsoBI	CYCGRG	3 cut(s)	827, 907, 1754
Bsp119I	TTCGAA	1 cut(s)	1966
BspACI	CCGC	6 cut(s)	466, 508, 526, 582, 681, 2208
BspCNI	CTCAG	8 cut(s)	57, 378, 418, 727, 844, 1078, 1170, 1193
BspHI	TCATGA	3 cut(s)	732, 1168, 1480
BspLI	GGNNCC	6 cut(s)	440, 580, 634, 1096, 1260, 2077
BspMAI	CTGCAG	1 cut(s)	9
BspOI	GCTAGC	1 cut(s)	1494
BspPI	GGATC	4 cut(s)	363, 416, 1669, 1812
BspT104I	TTCGAA	1 cut(s)	1966
BspT107I	GGYRCC	2 cut(s)	438, 578
BsrBI	CCGCTC	1 cut(s)	508
BsrDI	GCAATG	3 cut(s)	107, 1495, 1507
BsrFI	RCCGGY	3 cut(s)	560, 575, 1899
BsrI	ACTGG	6 cut(s)	22, 565, 1187, 1244, 1405, 1932
BssAI	RCCGGY	3 cut(s)	560, 575, 1899
BssECI	CCNNGG	9 cut(s)	333, 431, 792, 1098, 1254, 1353, 1682, 1754, 1909
BssNI	GRCGYC	4 cut(s)	1567, 1712, 1760, 1826
BssSI	CACGAG	1 cut(s)	1738
BssT1I	CCWWGG	2 cut(s)	333, 792
Bst2BI	CACGAG	1 cut(s)	1738
Bst2UI	CCWGG	6 cut(s)	260, 360, 432, 621, 1030, 1255
Bst4CI	ACNGT	4 cut(s)	193, 416, 1373, 1734
BstACI	GRCGYC	4 cut(s)	1567, 1712, 1760, 1826
BstAPI	GCANNNNNTGC	2 cut(s)	137, 616
BstBI	TTCGAA	1 cut(s)	1966
BstC8I	GCNNGC	2 cut(s)	681, 1492
BstDEI	CTNAG	8 cut(s)	65, 365, 426, 714, 852, 1065, 1157, 1180
BstDSI	CCRYGG	1 cut(s)	1909
BstEII	GGTNACC	2 cut(s)	865, 1895
BstENI	CCTNNNNNAGG	3 cut(s)	429, 549, 624
BstF5I	GGATG	7 cut(s)	80, 249, 315, 389, 732, 1080, 1112
BstMAI	GTCTC	5 cut(s)	471, 944, 1170, 1583, 1865
BstMCI	CGRYCG	1 cut(s)	1682
BstMWI	GCNNNNNNNGC	7 cut(s)	75, 101, 137, 616, 689, 829, 1025
BstNI	CCWGG	6 cut(s)	260, 360, 432, 621, 1030, 1255
BstNSI	RCATGY	1 cut(s)	1652
BstPI	GGTNACC	2 cut(s)	865, 1895
BstSCI	CCNGG	9 cut(s)	258, 358, 430, 619, 1028, 1253, 1753, 1754, 2147
BstSFI	CTRYAG	4 cut(s)	5, 189, 204, 1571
BstV2I	GAAGAC	5 cut(s)	1323, 1383, 1610, 2015, 2037
BstX2I	RGATCY	2 cut(s)	368, 848
BstXI	CCANNNNNNTGG	2 cut(s)	379, 1254
BstYI	RGATCY	2 cut(s)	368, 848
BstZI	CGGCCG	1 cut(s)	1679
BsuI	GTATCC	1 cut(s)	398
BtgI	CCRYGG	1 cut(s)	1909
BtgZI	GCGATG	1 cut(s)	1851
BtsCI	GGATG	7 cut(s)	80, 249, 315, 389, 732, 1080, 1112
BtsI	GCAGTG	4 cut(s)	138, 282, 597, 1447
BtsIMutI	CAGTG	9 cut(s)	15, 138, 198, 282, 597, 1194, 1341, 1447, 1939
Cac8I	GCNNGC	2 cut(s)	681, 1492
CaiI	CAGNNNCTG	3 cut(s)	64, 137, 2135
CciI	TCATGA	3 cut(s)	732, 1168, 1480
Cfr10I	RCCGGY	3 cut(s)	560, 575, 1899
Cfr13I	GGNCC	6 cut(s)	221, 903, 1274, 1560, 1916, 2075
Cfr9I	CCCGGG	1 cut(s)	1754
CseI	GACGC	2 cut(s)	488, 1575
Csp6I	GTAC	8 cut(s)	293, 417, 485, 579, 1476, 1730, 1887, 2200
CspAI	ACCGGT	1 cut(s)	575
CspCI	CAANNNNNGTGG	4 cut(s)	28, 63, 151, 186
CviAII	CATG	7 cut(s)	733, 784, 1169, 1481, 1649, 1672, 2193
CviQI	GTAC	8 cut(s)	293, 417, 485, 579, 1476, 1730, 1887, 2200
DdeI	CTNAG	8 cut(s)	65, 365, 426, 714, 852, 1065, 1157, 1180
DrdI	GACNNNNNNGTC	1 cut(s)	1825
DseDI	GACNNNNNNGTC	1 cut(s)	1825
EaeI	YGGCCR	2 cut(s)	562, 1679
EagI	CGGCCG	1 cut(s)	1679
EclXI	CGGCCG	1 cut(s)	1679
Eco130I	CCWWGG	2 cut(s)	333, 792
Eco147I	AGGCCT	2 cut(s)	263, 332
Eco32I	GATATC	1 cut(s)	1048
Eco47I	GGWCC	3 cut(s)	221, 903, 1274
Eco52I	CGGCCG	1 cut(s)	1679
Eco57I	CTGAAG	2 cut(s)	1248, 1317
Eco88I	CYCGRG	3 cut(s)	827, 907, 1754
Eco91I	GGTNACC	2 cut(s)	865, 1895
EcoNI	CCTNNNNNAGG	3 cut(s)	429, 549, 624
EcoO109I	RGGNCCY	1 cut(s)	903
EcoO65I	GGTNACC	2 cut(s)	865, 1895
EcoRII	CCWGG	6 cut(s)	258, 358, 430, 619, 1028, 1253
EcoRV	GATATC	1 cut(s)	1048
EcoT14I	CCWWGG	2 cut(s)	333, 792
ErhI	CCWWGG	2 cut(s)	333, 792
Esp3I	CGTCTC	2 cut(s)	471, 1865
FaeI	CATG	7 cut(s)	736, 787, 1172, 1484, 1652, 1675, 2196
FaqI	GGGAC	3 cut(s)	1771, 1816, 2231
FatI	CATG	7 cut(s)	732, 783, 1168, 1480, 1648, 1671, 2192
FauI	CCCGC	1 cut(s)	688
FbaI	TGATCA	1 cut(s)	1009
FblI	GTMKAC	1 cut(s)	1709
FokI	GGATG	7 cut(s)	67, 256, 302, 396, 739, 1067, 1099
FspBI	CTAG	7 cut(s)	75, 114, 251, 1437, 1491, 1995, 2181
GsaI	CCCAGC	4 cut(s)	348, 1019, 1363, 2139
GsuI	CTGGAG	2 cut(s)	1836, 1915
HapII	CCGG	6 cut(s)	561, 576, 1678, 1755, 1900, 2148
HgaI	GACGC	2 cut(s)	488, 1575
Hin1I	GRCGYC	4 cut(s)	1567, 1712, 1760, 1826
Hin1II	CATG	7 cut(s)	736, 787, 1172, 1484, 1652, 1675, 2196
HincII	GTYRAC	1 cut(s)	1710
HindII	GTYRAC	1 cut(s)	1710
HinfI	GANTC	8 cut(s)	338, 363, 811, 839, 956, 1063, 1243, 2082
HpaII	CCGG	6 cut(s)	561, 576, 1678, 1755, 1900, 2148
HphI	GGTGA	5 cut(s)	348, 859, 1004, 1243, 1714
Hpy166II	GTNNAC	4 cut(s)	1534, 1710, 2120, 2178
Hpy8I	GTNNAC	4 cut(s)	1534, 1710, 2120, 2178
Hpy99I	CGWCG	6 cut(s)	1700, 1714, 1717, 1797, 1828, 1831
HpyAV	CCTTC	7 cut(s)	243, 545, 900, 980, 1272, 1478, 1604
HpyCH4III	ACNGT	4 cut(s)	193, 416, 1373, 1734
HpyCH4IV	ACGT	3 cut(s)	1712, 1760, 1826
HpyF10VI	GCNNNNNNNGC	7 cut(s)	75, 101, 137, 616, 689, 829, 1025
HpyF3I	CTNAG	8 cut(s)	65, 365, 426, 714, 852, 1065, 1157, 1180
HpySE526I	ACGT	3 cut(s)	1712, 1760, 1826
Hsp92I	GRCGYC	4 cut(s)	1567, 1712, 1760, 1826
Hsp92II	CATG	7 cut(s)	736, 787, 1172, 1484, 1652, 1675, 2196
KpnI	GGTACC	1 cut(s)	582
Ksp22I	TGATCA	1 cut(s)	1009
LmnI	GCTCC	5 cut(s)	174, 247, 1258, 1613, 1934
LweI	GCATC	3 cut(s)	701, 865, 2058
MaeI	CTAG	7 cut(s)	75, 114, 251, 1437, 1491, 1995, 2181
MaeII	ACGT	3 cut(s)	1712, 1760, 1826
MaeIII	GTNAC	7 cut(s)	60, 158, 571, 865, 929, 1895, 2083
MbiI	CCGCTC	1 cut(s)	508
MflI	RGATCY	2 cut(s)	368, 848
MluCI	AATT	8 cut(s)	34, 86, 151, 697, 1542, 1554, 1641, 1872
MlyI	GAGTC	3 cut(s)	357, 1057, 2091
MmeI	TCCRAC	3 cut(s)	435, 452, 1421
MseI	TTAA	5 cut(s)	179, 1176, 1341, 1640, 1982
MslI	CAYNNNNRTG	5 cut(s)	20, 382, 716, 1500, 2066
MspA1I	CMGCKG	5 cut(s)	683, 1209, 2111, 2135, 2210
MspI	CCGG	6 cut(s)	561, 576, 1678, 1755, 1900, 2148
MspR9I	CCNGG	9 cut(s)	260, 360, 432, 621, 1030, 1255, 1755, 1756, 2149
Mva1269I	GAATGC	3 cut(s)	765, 1325, 1421
MvaI	CCWGG	6 cut(s)	260, 360, 432, 621, 1030, 1255
MwoI	GCNNNNNNNGC	7 cut(s)	75, 101, 137, 616, 689, 829, 1025
NciI	CCSGG	3 cut(s)	1755, 1756, 2149
NheI	GCTAGC	1 cut(s)	1490
NlaIII	CATG	7 cut(s)	736, 787, 1172, 1484, 1652, 1675, 2196
NlaIV	GGNNCC	6 cut(s)	440, 580, 634, 1096, 1260, 2077
NmeAIII	GCCGAG	1 cut(s)	1707
NmuCI	GTSAC	2 cut(s)	865, 2083
NspI	RCATGY	1 cut(s)	1652
NspV	TTCGAA	1 cut(s)	1966
PaeR7I	CTCGAG	1 cut(s)	907
PagI	TCATGA	3 cut(s)	732, 1168, 1480
PceI	AGGCCT	2 cut(s)	263, 332
PcsI	WCGNNNNNNNCGW	1 cut(s)	1823
PctI	GAATGC	3 cut(s)	765, 1325, 1421
PfeI	GAWTC	5 cut(s)	338, 811, 839, 956, 1243
PflFI	GACNNNGTC	1 cut(s)	1828
PinAI	ACCGGT	1 cut(s)	575
PleI	GAGTC	3 cut(s)	357, 1057, 2090
PpsI	GAGTC	3 cut(s)	357, 1057, 2090
PpuMI	RGGWCCY	1 cut(s)	903
PshBI	ATTAAT	1 cut(s)	1640
Psp5II	RGGWCCY	1 cut(s)	903
Psp6I	CCWGG	6 cut(s)	258, 358, 430, 619, 1028, 1253
PspEI	GGTNACC	2 cut(s)	865, 1895
PspFI	CCCAGC	4 cut(s)	344, 1015, 1359, 2135
PspGI	CCWGG	6 cut(s)	258, 358, 430, 619, 1028, 1253
PspN4I	GGNNCC	6 cut(s)	440, 580, 634, 1096, 1260, 2077
PspPI	GGNCC	6 cut(s)	221, 903, 1274, 1560, 1916, 2075
PspPPI	RGGWCCY	1 cut(s)	903
PspXI	VCTCGAGB	1 cut(s)	907
PstI	CTGCAG	1 cut(s)	9
PstNI	CAGNNNCTG	3 cut(s)	64, 137, 2135
PsuI	RGATCY	2 cut(s)	368, 848
PsyI	GACNNNGTC	1 cut(s)	1828
PvuII	CAGCTG	3 cut(s)	1209, 2111, 2135
RsaI	GTAC	8 cut(s)	294, 418, 486, 580, 1477, 1731, 1888, 2201
RsaNI	GTAC	8 cut(s)	293, 417, 485, 579, 1476, 1730, 1887, 2200
RseI	CAYNNNNRTG	5 cut(s)	20, 382, 716, 1500, 2066
SalI	GTCGAC	1 cut(s)	1708
SaqAI	TTAA	5 cut(s)	179, 1176, 1341, 1640, 1982
Sau96I	GGNCC	6 cut(s)	221, 903, 1274, 1560, 1916, 2075
ScaI	AGTACT	3 cut(s)	1477, 1888, 2201
SchI	GAGTC	3 cut(s)	357, 1057, 2091
ScrFI	CCNGG	9 cut(s)	260, 360, 432, 621, 1030, 1255, 1755, 1756, 2149
SfaNI	GCATC	3 cut(s)	701, 865, 2058
SfcI	CTRYAG	4 cut(s)	5, 189, 204, 1571
Sfr274I	CTCGAG	1 cut(s)	907
SfuI	TTCGAA	1 cut(s)	1966
SinI	GGWCC	3 cut(s)	221, 903, 1274
SlaI	CTCGAG	1 cut(s)	907
SmaI	CCCGGG	1 cut(s)	1756
SmiMI	CAYNNNNRTG	5 cut(s)	20, 382, 716, 1500, 2066
SmlI	CTYRAG	4 cut(s)	665, 833, 844, 907
SmoI	CTYRAG	4 cut(s)	665, 833, 844, 907
SpeI	ACTAGT	1 cut(s)	2180
Sse9I	AATT	8 cut(s)	34, 86, 151, 697, 1542, 1554, 1641, 1872
SseBI	AGGCCT	2 cut(s)	263, 332
SsiI	CCGC	6 cut(s)	466, 508, 526, 582, 681, 2208
SspI	AATATT	2 cut(s)	500, 2227
SspMI	CTAG	7 cut(s)	75, 114, 251, 1437, 1491, 1995, 2181
StuI	AGGCCT	2 cut(s)	263, 332
StyD4I	CCNGG	9 cut(s)	258, 358, 430, 619, 1028, 1253, 1753, 1754, 2147
StyI	CCWWGG	2 cut(s)	333, 792
TaaI	ACNGT	4 cut(s)	193, 416, 1373, 1734
TaiI	ACGT	3 cut(s)	1715, 1763, 1829
TaqI	TCGA	6 cut(s)	908, 1044, 1653, 1709, 1966, 2171
TaqII	GACCGA	1 cut(s)	1367
TasI	AATT	8 cut(s)	34, 86, 151, 697, 1542, 1554, 1641, 1872
TatI	WGTACW	3 cut(s)	1475, 1886, 2199
TauI	GCSGC	2 cut(s)	511, 528
TfiI	GAWTC	5 cut(s)	338, 811, 839, 956, 1243
Tru1I	TTAA	5 cut(s)	179, 1176, 1341, 1640, 1982
Tru9I	TTAA	5 cut(s)	179, 1176, 1341, 1640, 1982
TscAI	CASTG	9 cut(s)	22, 138, 198, 289, 604, 1194, 1341, 1447, 1939
TseFI	GTSAC	2 cut(s)	865, 2083
Tsp45I	GTSAC	2 cut(s)	865, 2083
TspDTI	ATGAA	5 cut(s)	721, 749, 970, 1497, 2041
TspGWI	ACGGA	1 cut(s)	559
TspMI	CCCGGG	1 cut(s)	1754
TspRI	CASTG	9 cut(s)	22, 138, 198, 289, 604, 1194, 1341, 1447, 1939
Tth111I	GACNNNGTC	1 cut(s)	1828
VpaK11BI	GGWCC	3 cut(s)	221, 903, 1274
VspI	ATTAAT	1 cut(s)	1640
XagI	CCTNNNNNAGG	3 cut(s)	429, 549, 624
XapI	RAATTY	4 cut(s)	151, 1542, 1554, 1872
XceI	RCATGY	1 cut(s)	1652
XhoI	CTCGAG	1 cut(s)	907
XmaI	CCCGGG	1 cut(s)	1754
XmiI	GTMKAC	1 cut(s)	1709
XspI	CTAG	7 cut(s)	75, 114, 251, 1437, 1491, 1995, 2181
ZraI	GACGTC	3 cut(s)	1713, 1761, 1827
ZrmI	AGTACT	3 cut(s)	1477, 1888, 2201

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.