Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001679

Physical Location & Seq

Genomic Coordinates Reverse (-)

19262030 .. 19265308

Gene Structure 3279 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G016360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGGATTTTGGGGTGGTGGGTGGTATGGACATGGATTGCTTGATGGGTCCTGAACCCGGAGAAGGAGCAACAGCTCATTCTCATGTCTCAGGACCCGAGACCAAACCGGGTCATGGATCTGGGTTGTCTTTCAAGCAACAGAGATCATGGCCTGTTGAGGATGACTGGAGGGTCTCCAAACCCGACGACATGTCGTCTCCCAGGACAATGCCATTGCCTCAGGGGCCTCCTCCTCAGCTCCTGATGAGATCTAGTTCTCTGGCTCCTCCCAGACAAGAGCAAATGCTGAGCTTTGCCTCCAATAAATCAGAGGTCACTTTTCTGAGCAAAGATGGAGGAGCAAGCTCAGATTTTGCATACTACCAGCGCATGCCTACTCCCTCTTCTCCCTATGCTAGAAATGCAGGTTATGGGTCTGGAAGCTTGAATGCAAACATGCATGGGCTTTATGCAGCGGCCAAAGGACCATTTACTCCTTCACAGTGGATTGAGCTAGAGCACCAGGCCTTGATCTACAAGTACCTGAATGCAAATGCGCCTGTGCCATCCAATTTGCTCATTCCTCTCAAGAAGGCCCTCTACCCTTATGGCTTGTCTGGCCCCTCTCCCAACTCATTAGGTTGGGGGTCTTTCCATCTGGGATATTCCGGCAATGCTGATCCTGAACCTGGGAGGTGTCGTCGAACGGATGGGAAGAAGTGGCGGTGCTCAAGAGATGCTGTAGCAGACCAGAAGTACTGCGAGAGGCACATTAACAGGGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAGACAGGCCATGGTGCCTCTAGGAGATCAAATTCAAAGGAAGTGGCGCCTCCGGTAACCTCATCAATGCCAACGTCGGTCAGTGGTGCATCCCAGCCGCAGTTCAAAAGCTTGGAGCCTCCTCCTGCTGATGCCGCTGCCGCCAATTCTTCTGCTGATGCCCTTGCCAACAGAATGCAAGATCCACAGGGTCTCTCCGTGATGTCTGCTTCTAGCATCAAGCCTGAATCTAATGCTTCGAGTTTTAACATCCCGAAACGAGATTTCCCTATGGAAGAATCGTCGCAATCAGAGTTTGGTCTTGTTTCTACGGATTCACTTCTCAACCCTTCACATAGGAGCTCTTACATTCCCAAAGATTTTGGTGGTTCTTTCCTTGATTTCACTGATCAGGAAACACAAGACCAAAATCTGCTTCACCAGTTCATCGATGATTGGCCCAAGGACCAGTCCAGTCAATCAGTTGTTACTTGGCCTGAGGATTTAAAATCAGACTGGACTCAGCTCTCAATGGCAATCCCTATGGCGTCGGATTTCTCCTCATCCTCATCCTCACCCACACAAGACAAGCTTGGACTCTCACCGCTGAGGCTCTCTCGTGAGTTCGAGCCAACACAAAATTTGGGGGTGAGCAATGACCAAAGCGAACCAACAGATCAGCAAACAAATTGGGTACCTATCTCTTGGAGAAGTTCGATGGGGGGTCCCTTAGGGGAAGTCCTGACCAACACCAGTAGCTGTGTGAACTCCAAGAACTCATCATCGTCGAACACATCACCTATTAACCTCTTGAACGAAGGCTGGGATGGCAGCAGCCAGTTAGAGTCTTCCCCAACCGGTGTCCTGCAAAAGTCAACATTCTGTTCACTTTCAAACAGTAGCTCAGGGAGCAGCCCAAGAGCTGATAACAAGAAGAGTCGGGATGGGGCAAGCCTATATGATGATGTACTCGGTTCAACTCTAGCAAGCTCCTCAGTTCCCTCCCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

QLQ WRC

Protein Analysis

593

Amino Acids

63.86

Weight (kDa)

5.73

Isoelectric Point (pI)

61.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
QLQ	PF08880	156 - 189	1.6e-14	QLQ
WRC	PF08879	221 - 263	1.1e-20	WRC

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001679)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22840 AT4G37740
fragaria_vesca	FvH4_1g18220 FvH4_2g32670 FvH4_2g32670 FvH4_2g32670 FvH4_2g32671
malus_domestica	MD02G1189500.v1.1 MD04G1215900.v1.1 MD15G1065000.v1.1 MD15G1300900.v1.1
prunus_persica	Prupe.1G419000_v2.0.a1 Prupe.1G419000_v2.0.a1 Prupe.1G419200_v2.0.a1 Prupe.6G217000_v2.0.a1
pyrus_communis	pycom02g15360 pycom08g06450 pycom15g26320
rosa_chinensis	RchiOBHm_Chr2g0108741 RchiOBHm_Chr6g0310031 RchiOBHm_Chr6g0310051
rosa_laevigata	RLG00000010515 RLG00000010516 RLG00000017688
rosa_multiflora	Rmu_sc0000294.1_g000016 Rmu_sc0010317.1_g000012
rosa_roxburghii	Rroxscaffold_2G00134850 Rroxscaffold_7G00158930 Rroxscaffold_7G00158940
rosa_rugosa	Rorug02G0155400 Rorug02G0155400 Rorug06G0377000 Rorug06G0377100 Rorug06G0377100 Rorug06G0377200
rosa_samantha	Rh2AG205600 Rh2BG217300 Rh2CG208500 Rh2DG211800 Rh6AG490600 Rh6AG490700 Rh6BG500100 Rh6BG500200 Rh6CG505000 Rh6CG505100 Rh6DG491000 Rh6DG491100
rosa_wichuraiana	Rw2G016360 Rw6G042700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	170
Acc36I	ACCTGC	1 cut(s)	395
Acc65I	GGTACC	1 cut(s)	1465
AccB1I	GGYRCC	3 cut(s)	806, 838, 1465
AciI	CCGC	7 cut(s)	455, 703, 763, 890, 927, 933, 1376
AclWI	GGATC	3 cut(s)	124, 653, 968
AcoI	YGGCCR	1 cut(s)	456
AcsI	RAATTY	2 cut(s)	823, 1411
AcyI	GRCGYC	2 cut(s)	839, 1319
AfaI	GTAC	4 cut(s)	521, 737, 1467, 1740
AfiI	CCNNNNNNNGG	5 cut(s)	56, 62, 113, 668, 788
AflIII	ACRYGT	1 cut(s)	189
AgeI	ACCGGT	1 cut(s)	1628
AgsI	TTSAA	8 cut(s)	133, 427, 774, 828, 898, 1585, 1665, 1749
AhdI	GACNNNNNGTC	2 cut(s)	190, 193
AjnI	CCWGG	3 cut(s)	200, 501, 667
AjuI	GAANNNNNNNTTGG	2 cut(s)	1191, 1223
Alw21I	GWGCWC	3 cut(s)	501, 710, 1136
Alw26I	GTCTC	5 cut(s)	91, 92, 178, 201, 989
AlwI	GGATC	3 cut(s)	124, 653, 968
AlwNI	CAGNNNCTG	2 cut(s)	241, 1530
Ama87I	CYCGRG	1 cut(s)	95
ApeKI	GCWGC	5 cut(s)	452, 929, 1602, 1605, 1683
ApoI	RAATTY	2 cut(s)	823, 1411
AsiGI	ACCGGT	1 cut(s)	1628
Asp718I	GGTACC	1 cut(s)	1465
AspLEI	GCGC	3 cut(s)	369, 538, 841
AsuC2I	CCSGG	2 cut(s)	57, 108
AsuHPI	GGTGA	5 cut(s)	1202, 1338, 1365, 1432, 1560
AvaI	CYCGRG	1 cut(s)	95
AvaII	GGWCC	5 cut(s)	47, 92, 464, 1237, 1496
AxyI	CCTNAGG	3 cut(s)	219, 1269, 1501
BanI	GGYRCC	3 cut(s)	806, 838, 1465
BanII	GRGCYC	1 cut(s)	1136
BarI	GAAGNNNNNNTAC	2 cut(s)	563, 595
BauI	CACGAG	1 cut(s)	1389
BbsI	GAAGAC	1 cut(s)	1611
Bbv12I	GWGCWC	3 cut(s)	501, 710, 1136
BbvCI	CCTCAGC	2 cut(s)	234, 1379
BbvI	GCAGC	5 cut(s)	464, 916, 1614, 1617, 1695
BccI	CCATC	9 cut(s)	37, 326, 553, 642, 683, 774, 1483, 1592, 1709
BciT130I	CCWGG	3 cut(s)	202, 503, 669
BclI	TGATCA	1 cut(s)	1180
BcnI	CCSGG	2 cut(s)	57, 108
BcoDI	GTCTC	5 cut(s)	91, 92, 178, 201, 989
BfaI	CTAG	6 cut(s)	252, 396, 494, 813, 1005, 1754
BfmI	CTRYAG	1 cut(s)	720
BfoI	RGCGCY	1 cut(s)	842
BfuAI	ACCTGC	1 cut(s)	395
BglI	GCCNNNNNGGC	2 cut(s)	223, 798
BglII	AGATCT	1 cut(s)	248
BlpI	GCTNAGC	1 cut(s)	287
BmcAI	AGTACT	1 cut(s)	737
Bme1390I	CCNGG	5 cut(s)	57, 108, 202, 503, 669
Bme18I	GGWCC	5 cut(s)	47, 92, 464, 1237, 1496
BmeRI	GACNNNNNGTC	2 cut(s)	190, 193
BmeT110I	CYCGRG	1 cut(s)	95
BmrFI	CCNGG	5 cut(s)	57, 108, 202, 503, 669
BmsI	GCATC	5 cut(s)	706, 890, 913, 940, 1017
BpiI	GAAGAC	1 cut(s)	1611
BplI	GAGNNNNNCTC	2 cut(s)	1372, 1404
BpmI	CTGGAG	1 cut(s)	187
Bpu10I	CCTNAGC	3 cut(s)	234, 1379, 1675
Bpu1102I	GCTNAGC	1 cut(s)	287
BpuEI	CTTGAG	2 cut(s)	551, 694
BpuMI	CCSGG	2 cut(s)	57, 108
Bsa29I	ATCGAT	1 cut(s)	1221
BsaHI	GRCGYC	2 cut(s)	839, 1319
BsaI	GGTCTC	3 cut(s)	92, 178, 989
BsaJI	CCNNGG	4 cut(s)	200, 668, 802, 1233
BsaWI	WCCGGW	2 cut(s)	844, 1628
BsaXI	ACNNNNNCTCC	2 cut(s)	664, 694
Bsc4I	CCNNNNNNNGG	5 cut(s)	56, 62, 113, 668, 788
Bse118I	RCCGGY	1 cut(s)	1628
Bse1I	ACTGG	7 cut(s)	170, 1213, 1240, 1245, 1292, 1524, 1609
Bse21I	CCTNAGG	3 cut(s)	219, 1269, 1501
Bse3DI	GCAATG	3 cut(s)	212, 658, 1432
BseBI	CCWGG	3 cut(s)	202, 503, 669
BseCI	ATCGAT	1 cut(s)	1221
BseDI	CCNNGG	4 cut(s)	200, 668, 802, 1233
BseGI	GGATG	9 cut(s)	166, 545, 694, 881, 1041, 1334, 1340, 1603, 1720
BseLI	CCNNNNNNNGG	5 cut(s)	56, 62, 113, 668, 788
BseMI	GCAATG	3 cut(s)	212, 658, 1432
BseNI	ACTGG	7 cut(s)	170, 1213, 1240, 1245, 1292, 1524, 1609
BseRI	GAGGAG	7 cut(s)	219, 222, 255, 351, 903, 1321, 1753
BseXI	GCAGC	5 cut(s)	464, 916, 1614, 1617, 1695
BseYI	CCCAGC	2 cut(s)	885, 1593
BshNI	GGYRCC	3 cut(s)	806, 838, 1465
BshTI	ACCGGT	1 cut(s)	1628
BshVI	ATCGAT	1 cut(s)	1221
BsiHKAI	GWGCWC	3 cut(s)	501, 710, 1136
BsiHKCI	CYCGRG	1 cut(s)	95
BsiSI	CCGG	5 cut(s)	57, 107, 648, 845, 1629
BslFI	GGGAC	1 cut(s)	1482
BslI	CCNNNNNNNGG	5 cut(s)	56, 62, 113, 668, 788
BsmAI	GTCTC	5 cut(s)	91, 92, 178, 201, 989
BsmBI	CGTCTC	1 cut(s)	201
BsmFI	GGGAC	1 cut(s)	1482
BsmI	GAATGC	3 cut(s)	433, 532, 972
Bso31I	GGTCTC	3 cut(s)	92, 178, 989
BsoBI	CYCGRG	1 cut(s)	95
Bsp1286I	GDGCHC	3 cut(s)	501, 710, 1136
Bsp143I	GATC	9 cut(s)	116, 143, 248, 510, 658, 818, 973, 1180, 1447
Bsp1720I	GCTNAGC	1 cut(s)	287
Bsp19I	CCATGG	1 cut(s)	802
BspACI	CCGC	7 cut(s)	455, 703, 763, 890, 927, 933, 1376
BspDI	ATCGAT	1 cut(s)	1221
BspMI	ACCTGC	1 cut(s)	395
BspPI	GGATC	3 cut(s)	124, 653, 968
BspT107I	GGYRCC	3 cut(s)	806, 838, 1465
BspTNI	GGTCTC	3 cut(s)	92, 178, 989
BsrDI	GCAATG	3 cut(s)	212, 658, 1432
BsrFI	RCCGGY	1 cut(s)	1628
BsrI	ACTGG	7 cut(s)	170, 1213, 1240, 1245, 1292, 1524, 1609
BssAI	RCCGGY	1 cut(s)	1628
BssECI	CCNNGG	4 cut(s)	200, 668, 802, 1233
BssMI	GATC	9 cut(s)	116, 143, 248, 510, 658, 818, 973, 1180, 1447
BssNI	GRCGYC	2 cut(s)	839, 1319
BssSI	CACGAG	1 cut(s)	1389
BssT1I	CCWWGG	2 cut(s)	802, 1233
Bst2BI	CACGAG	1 cut(s)	1389
Bst2UI	CCWGG	3 cut(s)	202, 503, 669
Bst4CI	ACNGT	2 cut(s)	483, 1670
Bst6I	CTCTTC	2 cut(s)	388, 1700
BstACI	GRCGYC	2 cut(s)	839, 1319
BstC8I	GCNNGC	4 cut(s)	343, 371, 1723, 1759
BstDSI	CCRYGG	1 cut(s)	802
BstEII	GGTNACC	1 cut(s)	847
BstENI	CCTNNNNNAGG	1 cut(s)	786
BstF5I	GGATG	9 cut(s)	166, 545, 694, 881, 1041, 1334, 1340, 1603, 1720
BstH2I	RGCGCY	1 cut(s)	842
BstHHI	GCGC	3 cut(s)	369, 538, 841
BstKTI	GATC	9 cut(s)	119, 146, 251, 513, 661, 821, 976, 1183, 1450
BstMAI	GTCTC	5 cut(s)	91, 92, 178, 201, 989
BstMBI	GATC	9 cut(s)	116, 143, 248, 510, 658, 818, 973, 1180, 1447
BstMWI	GCNNNNNNNGC	8 cut(s)	223, 401, 597, 798, 926, 932, 1599, 1680
BstNI	CCWGG	3 cut(s)	202, 503, 669
BstNSI	RCATGY	3 cut(s)	193, 373, 439
BstPI	GGTNACC	1 cut(s)	847
BstSCI	CCNGG	5 cut(s)	55, 106, 200, 501, 667
BstSFI	CTRYAG	1 cut(s)	720
BstV1I	GCAGC	5 cut(s)	464, 916, 1614, 1617, 1695
BstV2I	GAAGAC	1 cut(s)	1611
BstX2I	RGATCY	3 cut(s)	116, 248, 973
BstYI	RGATCY	3 cut(s)	116, 248, 973
Bsu15I	ATCGAT	1 cut(s)	1221
Bsu36I	CCTNAGG	3 cut(s)	219, 1269, 1501
BsuTUI	ATCGAT	1 cut(s)	1221
BtgI	CCRYGG	1 cut(s)	802
BtsCI	GGATG	9 cut(s)	166, 545, 694, 881, 1041, 1334, 1340, 1603, 1720
BtsIMutI	CAGTG	3 cut(s)	488, 880, 1176
BveI	ACCTGC	1 cut(s)	395
Cac8I	GCNNGC	4 cut(s)	343, 371, 1723, 1759
CaiI	CAGNNNCTG	2 cut(s)	241, 1530
CfoI	GCGC	3 cut(s)	369, 538, 841
Cfr10I	RCCGGY	1 cut(s)	1628
ClaI	ATCGAT	1 cut(s)	1221
CseI	GACGC	1 cut(s)	1308
Csp6I	GTAC	4 cut(s)	520, 736, 1466, 1739
CspAI	ACCGGT	1 cut(s)	1628
CspCI	CAANNNNNGTGG	2 cut(s)	816, 851
CviAII	CATG	9 cut(s)	31, 83, 113, 147, 190, 370, 436, 440, 803
CviQI	GTAC	4 cut(s)	520, 736, 1466, 1739
DinI	GGCGCC	1 cut(s)	840
DpnI	GATC	9 cut(s)	118, 145, 250, 512, 660, 820, 975, 1182, 1449
DpnII	GATC	9 cut(s)	116, 143, 248, 510, 658, 818, 973, 1180, 1447
DraI	TTTAAA	1 cut(s)	1278
DrdI	GACNNNNNNGTC	1 cut(s)	170
DriI	GACNNNNNGTC	2 cut(s)	190, 193
DseDI	GACNNNNNNGTC	1 cut(s)	170
EaeI	YGGCCR	1 cut(s)	456
Eam1104I	CTCTTC	2 cut(s)	388, 1700
Eam1105I	GACNNNNNGTC	2 cut(s)	190, 193
EarI	CTCTTC	2 cut(s)	388, 1700
Ecl136II	GAGCTC	1 cut(s)	1134
Eco130I	CCWWGG	2 cut(s)	802, 1233
Eco147I	AGGCCT	1 cut(s)	506
Eco24I	GRGCYC	1 cut(s)	1136
Eco31I	GGTCTC	3 cut(s)	92, 178, 989
Eco47I	GGWCC	5 cut(s)	47, 92, 464, 1237, 1496
Eco53kI	GAGCTC	1 cut(s)	1134
Eco81I	CCTNAGG	3 cut(s)	219, 1269, 1501
Eco88I	CYCGRG	1 cut(s)	95
Eco91I	GGTNACC	1 cut(s)	847
EcoICRI	GAGCTC	1 cut(s)	1134
EcoNI	CCTNNNNNAGG	1 cut(s)	786
EcoO109I	RGGNCCY	5 cut(s)	47, 92, 224, 574, 1496
EcoO65I	GGTNACC	1 cut(s)	847
EcoRII	CCWGG	3 cut(s)	200, 501, 667
EcoT14I	CCWWGG	2 cut(s)	802, 1233
EcoT22I	ATGCAT	1 cut(s)	441
EcoT38I	GRGCYC	1 cut(s)	1136
EgeI	GGCGCC	1 cut(s)	840
EheI	GGCGCC	1 cut(s)	840
ErhI	CCWWGG	2 cut(s)	802, 1233
Esp3I	CGTCTC	1 cut(s)	201
FaeI	CATG	9 cut(s)	34, 86, 116, 150, 193, 373, 439, 443, 806
FalI	AAGNNNNNCTT	2 cut(s)	1347, 1379
FaqI	GGGAC	1 cut(s)	1482
FatI	CATG	9 cut(s)	30, 82, 112, 146, 189, 369, 435, 439, 802
FbaI	TGATCA	1 cut(s)	1180
FokI	GGATG	9 cut(s)	173, 532, 701, 868, 1028, 1321, 1327, 1610, 1727
FriOI	GRGCYC	1 cut(s)	1136
FspBI	CTAG	6 cut(s)	252, 396, 494, 813, 1005, 1754
GlaI	GCGC	3 cut(s)	368, 537, 840
GsaI	CCCAGC	2 cut(s)	889, 1597
GsuI	CTGGAG	1 cut(s)	187
HaeII	RGCGCY	1 cut(s)	842
HapII	CCGG	5 cut(s)	57, 107, 648, 845, 1629
HgaI	GACGC	1 cut(s)	1308
HhaI	GCGC	3 cut(s)	369, 538, 841
Hin1I	GRCGYC	2 cut(s)	839, 1319
Hin1II	CATG	9 cut(s)	34, 86, 116, 150, 193, 373, 439, 443, 806
Hin6I	GCGC	3 cut(s)	367, 536, 839
HinP1I	GCGC	3 cut(s)	367, 536, 839
HincII	GTYRAC	1 cut(s)	1647
HindII	GTYRAC	1 cut(s)	1647
HindIII	AAGCTT	3 cut(s)	421, 901, 1361
HinfI	GANTC	7 cut(s)	1019, 1070, 1106, 1291, 1368, 1616, 1708
HpaII	CCGG	5 cut(s)	57, 107, 648, 845, 1629
HphI	GGTGA	5 cut(s)	1202, 1338, 1365, 1432, 1560
Hpy166II	GTNNAC	3 cut(s)	1537, 1647, 1658
Hpy188I	TCNGA	6 cut(s)	310, 324, 349, 1084, 1285, 1324
Hpy8I	GTNNAC	3 cut(s)	1537, 1647, 1658
Hpy99I	CGWCG	6 cut(s)	188, 684, 871, 1078, 1324, 1561
HpyAV	CCTTC	6 cut(s)	56, 486, 565, 782, 1131, 1583
HpyCH4III	ACNGT	2 cut(s)	483, 1670
HpyCH4IV	ACGT	1 cut(s)	866
HpyCH4V	TGCA	9 cut(s)	356, 404, 431, 439, 452, 530, 881, 970, 1639
HpyF10VI	GCNNNNNNNGC	8 cut(s)	223, 401, 597, 798, 926, 932, 1599, 1680
HpySE526I	ACGT	1 cut(s)	866
Hsp92I	GRCGYC	2 cut(s)	839, 1319
Hsp92II	CATG	9 cut(s)	34, 86, 116, 150, 193, 373, 439, 443, 806
HspAI	GCGC	3 cut(s)	367, 536, 839
KasI	GGCGCC	1 cut(s)	838
KflI	GGGWCCC	1 cut(s)	1496
KpnI	GGTACC	1 cut(s)	1469
Ksp22I	TGATCA	1 cut(s)	1180
Kzo9I	GATC	9 cut(s)	116, 143, 248, 510, 658, 818, 973, 1180, 1447
LmnI	GCTCC	8 cut(s)	65, 243, 268, 338, 907, 1131, 1680, 1766
Lsp1109I	GCAGC	5 cut(s)	464, 916, 1614, 1617, 1695
LweI	GCATC	5 cut(s)	706, 890, 913, 940, 1017
MaeI	CTAG	6 cut(s)	252, 396, 494, 813, 1005, 1754
MaeII	ACGT	1 cut(s)	866
MaeIII	GTNAC	3 cut(s)	313, 847, 1258
MalI	GATC	9 cut(s)	118, 145, 250, 512, 660, 820, 975, 1182, 1449
MboI	GATC	9 cut(s)	116, 143, 248, 510, 658, 818, 973, 1180, 1447
MboII	GAAGA	6 cut(s)	375, 706, 933, 1079, 1611, 1717
MflI	RGATCY	3 cut(s)	116, 248, 973
MhlI	GDGCHC	3 cut(s)	501, 710, 1136
MluCI	AATT	5 cut(s)	550, 823, 937, 1411, 1459
Mly113I	GGCGCC	1 cut(s)	839
MlyI	GAGTC	4 cut(s)	1285, 1362, 1625, 1717
MmeI	TCCRAC	1 cut(s)	1302
Mph1103I	ATGCAT	1 cut(s)	441
MseI	TTAA	4 cut(s)	753, 1038, 1277, 1575
MslI	CAYNNNNRTG	1 cut(s)	81
MspA1I	CMGCKG	3 cut(s)	455, 929, 1378
MspI	CCGG	5 cut(s)	57, 107, 648, 845, 1629
MspR9I	CCNGG	5 cut(s)	57, 108, 202, 503, 669
Mva1269I	GAATGC	3 cut(s)	433, 532, 972
MvaI	CCWGG	3 cut(s)	202, 503, 669
MwoI	GCNNNNNNNGC	8 cut(s)	223, 401, 597, 798, 926, 932, 1599, 1680
NarI	GGCGCC	1 cut(s)	839
NciI	CCSGG	2 cut(s)	57, 108
NcoI	CCATGG	1 cut(s)	802
NdeII	GATC	9 cut(s)	116, 143, 248, 510, 658, 818, 973, 1180, 1447
NlaIII	CATG	9 cut(s)	34, 86, 116, 150, 193, 373, 439, 443, 806
NmuCI	GTSAC	1 cut(s)	313
NsiI	ATGCAT	1 cut(s)	441
NspI	RCATGY	3 cut(s)	193, 373, 439
PaeI	GCATGC	1 cut(s)	373
PceI	AGGCCT	1 cut(s)	506
PciI	ACATGT	1 cut(s)	189
PctI	GAATGC	3 cut(s)	433, 532, 972
PfeI	GAWTC	3 cut(s)	1019, 1070, 1106
PinAI	ACCGGT	1 cut(s)	1628
PleI	GAGTC	4 cut(s)	1285, 1362, 1624, 1716
PluTI	GGCGCC	1 cut(s)	842
PpsI	GAGTC	4 cut(s)	1285, 1362, 1624, 1716
PpuMI	RGGWCCY	3 cut(s)	47, 92, 1496
PscI	ACATGT	1 cut(s)	189
Psp124BI	GAGCTC	1 cut(s)	1136
Psp5II	RGGWCCY	3 cut(s)	47, 92, 1496
Psp6I	CCWGG	3 cut(s)	200, 501, 667
PspEI	GGTNACC	1 cut(s)	847
PspFI	CCCAGC	2 cut(s)	885, 1593
PspGI	CCWGG	3 cut(s)	200, 501, 667
PspPPI	RGGWCCY	3 cut(s)	47, 92, 1496
PstNI	CAGNNNCTG	2 cut(s)	241, 1530
PsuI	RGATCY	3 cut(s)	116, 248, 973
RsaI	GTAC	4 cut(s)	521, 737, 1467, 1740
RsaNI	GTAC	4 cut(s)	520, 736, 1466, 1739
RseI	CAYNNNNRTG	1 cut(s)	81
SacI	GAGCTC	1 cut(s)	1136
SaqAI	TTAA	4 cut(s)	753, 1038, 1277, 1575
Sau3AI	GATC	9 cut(s)	116, 143, 248, 510, 658, 818, 973, 1180, 1447
ScaI	AGTACT	1 cut(s)	737
SchI	GAGTC	4 cut(s)	1285, 1362, 1625, 1717
ScrFI	CCNGG	5 cut(s)	57, 108, 202, 503, 669
SduI	GDGCHC	3 cut(s)	501, 710, 1136
SfaNI	GCATC	5 cut(s)	706, 890, 913, 940, 1017
SfcI	CTRYAG	1 cut(s)	720
SfiI	GGCCNNNNNGGCC	1 cut(s)	798
SfoI	GGCGCC	1 cut(s)	840
SinI	GGWCC	5 cut(s)	47, 92, 464, 1237, 1496
SmiMI	CAYNNNNRTG	1 cut(s)	81
SmlI	CTYRAG	2 cut(s)	566, 709
SmoI	CTYRAG	2 cut(s)	566, 709
SphI	GCATGC	1 cut(s)	373
Sse9I	AATT	5 cut(s)	550, 823, 937, 1411, 1459
SseBI	AGGCCT	1 cut(s)	506
SsiI	CCGC	7 cut(s)	455, 703, 763, 890, 927, 933, 1376
SspDI	GGCGCC	1 cut(s)	838
SspMI	CTAG	6 cut(s)	252, 396, 494, 813, 1005, 1754
SstI	GAGCTC	1 cut(s)	1136
StuI	AGGCCT	1 cut(s)	506
StyD4I	CCNGG	5 cut(s)	55, 106, 200, 501, 667
StyI	CCWWGG	2 cut(s)	802, 1233
TaaI	ACNGT	2 cut(s)	483, 1670
TaiI	ACGT	1 cut(s)	869
TaqI	TCGA	6 cut(s)	682, 1031, 1221, 1398, 1487, 1559
TaqII	GACCGA	1 cut(s)	859
TasI	AATT	5 cut(s)	550, 823, 937, 1411, 1459
TatI	WGTACW	2 cut(s)	735, 1738
TauI	GCSGC	5 cut(s)	458, 765, 892, 929, 935
TfiI	GAWTC	3 cut(s)	1019, 1070, 1106
Tru1I	TTAA	4 cut(s)	753, 1038, 1277, 1575
Tru9I	TTAA	4 cut(s)	753, 1038, 1277, 1575
TscAI	CASTG	3 cut(s)	488, 880, 1183
TseFI	GTSAC	1 cut(s)	313
TseI	GCWGC	5 cut(s)	452, 929, 1602, 1605, 1683
Tsp45I	GTSAC	1 cut(s)	313
TspDTI	ATGAA	1 cut(s)	1207
TspGWI	ACGGA	3 cut(s)	701, 979, 1118
TspRI	CASTG	3 cut(s)	488, 880, 1183
VpaK11BI	GGWCC	5 cut(s)	47, 92, 464, 1237, 1496
XagI	CCTNNNNNAGG	1 cut(s)	786
XapI	RAATTY	2 cut(s)	823, 1411
XceI	RCATGY	3 cut(s)	193, 373, 439
XcmI	CCANNNNNNNNNTGG	1 cut(s)	800
XspI	CTAG	6 cut(s)	252, 396, 494, 813, 1005, 1754
ZrmI	AGTACT	1 cut(s)	737
Zsp2I	ATGCAT	1 cut(s)	441

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.