Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0001679

Physical Location & Seq

Genomic Coordinates Reverse (-)

28847105 .. 28850233

Gene Structure 3129 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1300900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGGCCGAGGTGTCCGGAATGGATTTTGGGCTGATGGGTTTGGAGGGTTTGGTGGGTCCCGAAGCCGGAGGAGGAGAGGCAGCGGGAAAAGTTGGTGACGGATCTGGCTCCGCCTCCGCCAAGCAGCAAAGATCTTGGCCGGTGGACGACGACTGGAGGACCTCAAAAATGCCGAAAAACGAAGATTTGAATGCTTCCAGGACAATGCCCTTGCAGTACCAGGGGACACCTCTGCTGAGATCTAATTCTCAGCTGCTTCCTCCTCCAGCTGAGACTCACAGGCAGGAGCAAATGCTGAGCTTTTCTAACAACAAATCAGAAGTCAGTTTTCTCAGCAAAGATGGAGACTTTGCCTACTACCAGAGGAATCCCACTCCCATTCTCTCTCCTTACCCAAGGAATGCAGGCTCACCAGGTTATGGAAGCTTGAATCTGAGCATGCATGGGCCTTTGACTGGGGCTAGAGGACCCTTCACTCCTTCTCAGTGGATTGAGCTGGAGCACCAGGCCTTGATCTACAAGTACATGACTTCAAATGTGCCTGTCCCTTCCAATCTGCTCATACCTCTCAAGAAACCCCTCTACCCTTATGGCTTGTCTGGTCCTTCTAATCCCACCTCAATAGCGTGGGGCGCTTACCATCTGGGCTTCTCTGGCAACAACGATCCCGAACCTGGGAGGTGTCGCCGAACCGATGGGAAGAAATGGCGTTGCTCGAGAGATGCTGTTGCAGATCAGAAGTATTGTGAAAGGCATATTAACAGGGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAGCCTGGCCAGGCCGTCTCTGGGACCAGTAATTCAAAGAGGGTGCCTATGAATTCGTCAATGTCAACATCCGTGATGGCAAGCAATGGCGCATCCAACAGCATCACAACCGCGCCACAGCAGTTCAAAAGATTGCAGACTGCTGTTGCTGCCAATCCTTCTTCTGCAGATGCCTTTGTCAACAGGATGCAAGATCCACGAGGACTTTCCGTGATGTCTGCTCCTACCCTTAAGCCGAAATCCAACAATTCGACATCTAAACTTGGAAAACAAGAATTCCTAGTGGAAGAATCCTCCCAATCAGAGTTTGGAATTGTTTCTACTTATTCACTTCTCAACCCTTCACATAGGAACTCTTACATCTCTAAAGATTTTGGTGGTTCTTTCCTAGACTTCAGTGATCAAGAAACTCAAGACCAACATCCGCTTCGCCAGTTCATGGATGATTGGCCTAAGGACCAGTCCAGTCACTCAGTCTCTACTTGGCCTGAAGAAATAAAATCTGACTGGACGCAGCTATCAATGTCGATCCCAATGGCATCCTCTGAGTTCTCATCATCCTCTTCCTCCCCAACGCACGAGAAACTTGCGCTCTCACCGCTGAGGCTATCCCGGGAGTTTGTGCCTGCCCAAATGAATTTGGGAATGAGCAATGACCTTAGCGAATCAATCCAGAAACAAACTAATTGGATACCTATCCCCTGGGGAAATTCAATGGGGGGTCCTTTAGGAGAGGTCATAACCAACACCACCAGCAGTGGCAAGATCTGCAATAACTCAACATCGCCGCTTAACCTCTTAAATGAAGGGTGGGATGGCAACTCTCAGTTGGGATCTTCCCCAACTGGTGTCTTGCAGAAGTCAACTTTCTGTTCGCTTTCAAACAGCAGCTCAGGGAGCAGCCCAAGAGGAGGTGAGATCAAGAAGAGTAGCCTTGATGGGGCAAGCATATATGATGACGTGCTAGGTTCGACCTTCGCAAGCTCCCCAGTTCCATCCCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

QLQ WRC

Protein Analysis

601

Amino Acids

64.89

Weight (kDa)

7.66

Isoelectric Point (pI)

52.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
QLQ	PF08880	157 - 190	2.6e-14	QLQ
WRC	PF08879	223 - 265	1.1e-20	WRC

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001679)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22840 AT4G37740
fragaria_vesca	FvH4_1g18220 FvH4_2g32670 FvH4_2g32670 FvH4_2g32670 FvH4_2g32671
malus_domestica	MD02G1189500.v1.1 MD04G1215900.v1.1 MD15G1065000.v1.1 MD15G1300900.v1.1
prunus_persica	Prupe.1G419000_v2.0.a1 Prupe.1G419000_v2.0.a1 Prupe.1G419200_v2.0.a1 Prupe.6G217000_v2.0.a1
pyrus_communis	pycom02g15360 pycom08g06450 pycom15g26320
rosa_chinensis	RchiOBHm_Chr2g0108741 RchiOBHm_Chr6g0310031 RchiOBHm_Chr6g0310051
rosa_laevigata	RLG00000010515 RLG00000010516 RLG00000017688
rosa_multiflora	Rmu_sc0000294.1_g000016 Rmu_sc0010317.1_g000012
rosa_roxburghii	Rroxscaffold_2G00134850 Rroxscaffold_7G00158930 Rroxscaffold_7G00158940
rosa_rugosa	Rorug02G0155400 Rorug02G0155400 Rorug06G0377000 Rorug06G0377100 Rorug06G0377100 Rorug06G0377200
rosa_samantha	Rh2AG205600 Rh2BG217300 Rh2CG208500 Rh2DG211800 Rh6AG490600 Rh6AG490700 Rh6BG500100 Rh6BG500200 Rh6CG505000 Rh6CG505100 Rh6DG491000 Rh6DG491100
rosa_wichuraiana	Rw2G016360 Rw6G042700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	841
AccB7I	CCANNNNNTGG	2 cut(s)	419, 1237
AccII	CGCG	1 cut(s)	911
AccIII	TCCGGA	1 cut(s)	14
AciI	CCGC	8 cut(s)	83, 111, 117, 769, 909, 1223, 1397, 1586
AclWI	GGATC	5 cut(s)	109, 659, 986, 1321, 1639
AcoI	YGGCCR	3 cut(s)	3, 137, 805
AcsI	RAATTY	4 cut(s)	850, 1073, 1435, 1507
AcuI	CTGAAG	2 cut(s)	1177, 1308
AfaI	GTAC	2 cut(s)	218, 524
AflII	CTTAAG	1 cut(s)	1028
AgsI	TTSAA	8 cut(s)	190, 430, 534, 780, 834, 925, 1512, 1680
AjiI	CACGTC	1 cut(s)	1759
AjnI	CCWGG	8 cut(s)	197, 219, 412, 504, 673, 802, 807, 1499
AjuI	GAANNNNNNNTTGG	2 cut(s)	1209, 1241
AluBI	AGCT	8 cut(s)	253, 269, 300, 426, 496, 1315, 1689, 1782
AluI	AGCT	8 cut(s)	253, 269, 300, 426, 496, 1315, 1689, 1782
Alw21I	GWGCWC	1 cut(s)	504
Alw26I	GTCTC	4 cut(s)	266, 339, 820, 1279
AlwI	GGATC	5 cut(s)	109, 659, 986, 1321, 1639
Ama87I	CYCGRG	2 cut(s)	715, 1410
Aor13HI	TCCGGA	1 cut(s)	14
ApeKI	GCWGC	7 cut(s)	80, 124, 253, 947, 1312, 1686, 1698
ApoI	RAATTY	4 cut(s)	850, 1073, 1435, 1507
ArsI	GACNNNNNNTTYG	2 cut(s)	306, 338
Asp700I	GAANNNNTTC	1 cut(s)	1114
AspLEI	GCGC	4 cut(s)	635, 890, 913, 1390
AspS9I	GGNCC	9 cut(s)	56, 159, 446, 467, 602, 766, 822, 1255, 1520
AsuC2I	CCSGG	2 cut(s)	1411, 1412
AsuHPI	GGTGA	4 cut(s)	107, 402, 1386, 1724
AvaI	CYCGRG	2 cut(s)	715, 1410
AvaII	GGWCC	7 cut(s)	56, 159, 467, 602, 822, 1255, 1520
AxyI	CCTNAGG	1 cut(s)	1251
BalI	TGGCCA	1 cut(s)	807
BanI	GGYRCC	1 cut(s)	841
BauI	CACGAG	2 cut(s)	996, 1376
Bbv12I	GWGCWC	1 cut(s)	504
BbvCI	CCTCAGC	1 cut(s)	1400
BbvI	GCAGC	7 cut(s)	92, 136, 240, 934, 1324, 1698, 1710
BccI	CCATC	9 cut(s)	28, 335, 648, 689, 780, 868, 1607, 1730, 1801
BceAI	ACGGC	1 cut(s)	797
BcgI	CGANNNNNNTGC	2 cut(s)	1367, 1401
BciT130I	CCWGG	8 cut(s)	199, 221, 414, 506, 675, 804, 809, 1501
BciVI	GTATCC	1 cut(s)	1482
BclI	TGATCA	1 cut(s)	1198
BcnI	CCSGG	2 cut(s)	1411, 1412
BcoDI	GTCTC	4 cut(s)	266, 339, 820, 1279
BfaI	CTAG	4 cut(s)	462, 1079, 1187, 1763
BfmI	CTRYAG	1 cut(s)	963
BfoI	RGCGCY	1 cut(s)	636
BfrI	CTTAAG	1 cut(s)	1028
BfuI	GTATCC	1 cut(s)	1482
BglI	GCCNNNNNGGC	1 cut(s)	804
BglII	AGATCT	3 cut(s)	131, 239, 1563
BisI	GCNGC	9 cut(s)	81, 125, 254, 769, 948, 1313, 1586, 1687, 1699
BlpI	GCTNAGC	1 cut(s)	296
BlsI	GCNGC	9 cut(s)	82, 126, 255, 770, 949, 1314, 1587, 1688, 1700
Bme18I	GGWCC	7 cut(s)	56, 159, 467, 602, 822, 1255, 1520
BmeT110I	CYCGRG	2 cut(s)	715, 1410
BmgBI	CACGTC	1 cut(s)	1759
BmgT120I	GGNCC	9 cut(s)	56, 159, 446, 467, 602, 766, 822, 1255, 1520
BmiI	GGNNCC	8 cut(s)	57, 58, 109, 469, 767, 823, 843, 1521
BmrI	ACTGGG	2 cut(s)	465, 1781
BmsI	GCATC	6 cut(s)	712, 899, 909, 958, 975, 1346
BmuI	ACTGGG	2 cut(s)	465, 1781
BpmI	CTGGAG	3 cut(s)	175, 249, 518
Bpu10I	CCTNAGC	3 cut(s)	1400, 1457, 1690
Bpu1102I	GCTNAGC	1 cut(s)	296
BpuEI	CTTGAG	2 cut(s)	554, 1194
BpuMI	CCSGG	2 cut(s)	1411, 1412
BsaBI	GATNNNNATC	1 cut(s)	1493
BsaJI	CCNNGG	7 cut(s)	6, 220, 395, 674, 1410, 1499, 1500
BsaWI	WCCGGW	1 cut(s)	14
Bse118I	RCCGGY	1 cut(s)	139
Bse1I	ACTGG	9 cut(s)	158, 460, 825, 1231, 1258, 1263, 1310, 1648, 1787
Bse21I	CCTNAGG	1 cut(s)	1251
Bse3DI	GCAATG	2 cut(s)	889, 1456
Bse8I	GATNNNNATC	1 cut(s)	1493
BseAI	TCCGGA	1 cut(s)	14
BseBI	CCWGG	8 cut(s)	199, 221, 414, 506, 675, 804, 809, 1501
BseDI	CCNNGG	7 cut(s)	6, 220, 395, 674, 1410, 1499, 1500
BseGI	GGATG	9 cut(s)	866, 890, 990, 1219, 1246, 1337, 1355, 1618, 1793
BseJI	GATNNNNATC	1 cut(s)	1493
BseMI	GCAATG	2 cut(s)	889, 1456
BseNI	ACTGG	9 cut(s)	158, 460, 825, 1231, 1258, 1263, 1310, 1648, 1787
BseRI	GAGGAG	4 cut(s)	84, 87, 252, 1722
BseXI	GCAGC	7 cut(s)	92, 136, 240, 934, 1324, 1698, 1710
Bsh1236I	CGCG	1 cut(s)	911
BshNI	GGYRCC	1 cut(s)	841
BsiHKAI	GWGCWC	1 cut(s)	504
BsiHKCI	CYCGRG	2 cut(s)	715, 1410
BsiSI	CCGG	4 cut(s)	15, 66, 140, 1411
BslFI	GGGAC	4 cut(s)	42, 238, 530, 835
BsmAI	GTCTC	4 cut(s)	266, 339, 820, 1279
BsmBI	CGTCTC	1 cut(s)	820
BsmFI	GGGAC	4 cut(s)	42, 238, 530, 835
BsmI	GAATGC	2 cut(s)	196, 406
BsoBI	CYCGRG	2 cut(s)	715, 1410
Bsp1286I	GDGCHC	1 cut(s)	504
Bsp13I	TCCGGA	1 cut(s)	14
Bsp1720I	GCTNAGC	1 cut(s)	296
BspACI	CCGC	8 cut(s)	83, 111, 117, 769, 909, 1223, 1397, 1586
BspEI	TCCGGA	1 cut(s)	14
BspFNI	CGCG	1 cut(s)	911
BspLI	GGNNCC	8 cut(s)	57, 58, 109, 469, 767, 823, 843, 1521
BspMAI	CTGCAG	1 cut(s)	967
BspPI	GGATC	5 cut(s)	109, 659, 986, 1321, 1639
BspT107I	GGYRCC	1 cut(s)	841
BspTI	CTTAAG	1 cut(s)	1028
BsrDI	GCAATG	2 cut(s)	889, 1456
BsrFI	RCCGGY	1 cut(s)	139
BsrI	ACTGG	9 cut(s)	158, 460, 825, 1231, 1258, 1263, 1310, 1648, 1787
BssAI	RCCGGY	1 cut(s)	139
BssECI	CCNNGG	7 cut(s)	6, 220, 395, 674, 1410, 1499, 1500
BssSI	CACGAG	2 cut(s)	996, 1376
BssT1I	CCWWGG	1 cut(s)	395
Bst2BI	CACGAG	2 cut(s)	996, 1376
Bst2UI	CCWGG	8 cut(s)	199, 221, 414, 506, 675, 804, 809, 1501
Bst6I	CTCTTC	2 cut(s)	1366, 1718
BstAFI	CTTAAG	1 cut(s)	1028
BstAPI	GCANNNNNTGC	1 cut(s)	1566
BstC8I	GCNNGC	7 cut(s)	406, 440, 800, 880, 1425, 1744, 1780
BstENI	CCTNNNNNAGG	1 cut(s)	792
BstF5I	GGATG	9 cut(s)	866, 890, 990, 1219, 1246, 1337, 1355, 1618, 1793
BstFNI	CGCG	1 cut(s)	911
BstH2I	RGCGCY	1 cut(s)	636
BstHHI	GCGC	4 cut(s)	635, 890, 913, 1390
BstMAI	GTCTC	4 cut(s)	266, 339, 820, 1279
BstMWI	GCNNNNNNNGC	7 cut(s)	632, 654, 804, 947, 1396, 1566, 1695
BstNI	CCWGG	8 cut(s)	199, 221, 414, 506, 675, 804, 809, 1501
BstNSI	RCATGY	1 cut(s)	442
BstSFI	CTRYAG	1 cut(s)	963
BstUI	CGCG	1 cut(s)	911
BstV1I	GCAGC	7 cut(s)	92, 136, 240, 934, 1324, 1698, 1710
BstX2I	RGATCY	6 cut(s)	101, 131, 239, 991, 1563, 1631
BstYI	RGATCY	6 cut(s)	101, 131, 239, 991, 1563, 1631
Bsu36I	CCTNAGG	1 cut(s)	1251
BsuI	GTATCC	1 cut(s)	1482
BtgZI	GCGATG	1 cut(s)	1566
BtrI	CACGTC	1 cut(s)	1759
BtsCI	GGATG	9 cut(s)	866, 890, 990, 1219, 1246, 1337, 1355, 1618, 1793
BtsI	GCAGTG	1 cut(s)	1561
BtsIMutI	CAGTG	3 cut(s)	491, 1201, 1561
Cac8I	GCNNGC	7 cut(s)	406, 440, 800, 880, 1425, 1744, 1780
CfoI	GCGC	4 cut(s)	635, 890, 913, 1390
Cfr10I	RCCGGY	1 cut(s)	139
Cfr13I	GGNCC	9 cut(s)	56, 159, 446, 467, 602, 766, 822, 1255, 1520
Cfr9I	CCCGGG	1 cut(s)	1410
CseI	GACGC	1 cut(s)	1318
CsiI	ACCWGGT	1 cut(s)	412
Csp6I	GTAC	2 cut(s)	217, 523
CviAII	CATG	4 cut(s)	439, 443, 526, 1237
CviQI	GTAC	2 cut(s)	217, 523
EaeI	YGGCCR	3 cut(s)	3, 137, 805
Eam1104I	CTCTTC	2 cut(s)	1366, 1718
EarI	CTCTTC	2 cut(s)	1366, 1718
EciI	GGCGGA	2 cut(s)	100, 106
Eco130I	CCWWGG	1 cut(s)	395
Eco147I	AGGCCT	1 cut(s)	509
Eco47I	GGWCC	7 cut(s)	56, 159, 467, 602, 822, 1255, 1520
Eco57I	CTGAAG	2 cut(s)	1177, 1308
Eco81I	CCTNAGG	1 cut(s)	1251
Eco88I	CYCGRG	2 cut(s)	715, 1410
EcoNI	CCTNNNNNAGG	1 cut(s)	792
EcoO109I	RGGNCCY	4 cut(s)	56, 159, 467, 1520
EcoRI	GAATTC	2 cut(s)	850, 1073
EcoRII	CCWGG	8 cut(s)	197, 219, 412, 504, 673, 802, 807, 1499
EcoT14I	CCWWGG	1 cut(s)	395
EcoT22I	ATGCAT	1 cut(s)	444
ErhI	CCWWGG	1 cut(s)	395
Esp3I	CGTCTC	1 cut(s)	820
FaeI	CATG	4 cut(s)	442, 446, 529, 1240
FaqI	GGGAC	4 cut(s)	42, 238, 530, 835
FatI	CATG	4 cut(s)	438, 442, 525, 1236
FauI	CCCGC	1 cut(s)	76
FbaI	TGATCA	1 cut(s)	1198
Fnu4HI	GCNGC	9 cut(s)	81, 125, 254, 769, 948, 1313, 1586, 1687, 1699
FokI	GGATG	9 cut(s)	853, 877, 997, 1206, 1253, 1324, 1342, 1625, 1780
Fsp4HI	GCNGC	9 cut(s)	81, 125, 254, 769, 948, 1313, 1586, 1687, 1699
FspBI	CTAG	4 cut(s)	462, 1079, 1187, 1763
GlaI	GCGC	4 cut(s)	634, 889, 912, 1389
GluI	GCNGC	9 cut(s)	81, 125, 254, 769, 948, 1313, 1586, 1687, 1699
GsuI	CTGGAG	3 cut(s)	175, 249, 518
HaeII	RGCGCY	1 cut(s)	636
HapII	CCGG	4 cut(s)	15, 66, 140, 1411
HgaI	GACGC	1 cut(s)	1318
HhaI	GCGC	4 cut(s)	635, 890, 913, 1390
Hin1II	CATG	4 cut(s)	442, 446, 529, 1240
Hin6I	GCGC	4 cut(s)	633, 888, 911, 1388
HinP1I	GCGC	4 cut(s)	633, 888, 911, 1388
HincII	GTYRAC	3 cut(s)	864, 979, 1662
HindII	GTYRAC	3 cut(s)	864, 979, 1662
HindIII	AAGCTT	1 cut(s)	424
HinfI	GANTC	5 cut(s)	274, 367, 430, 1088, 1463
HpaII	CCGG	4 cut(s)	15, 66, 140, 1411
HphI	GGTGA	4 cut(s)	107, 402, 1386, 1724
Hpy166II	GTNNAC	4 cut(s)	145, 864, 979, 1662
Hpy188I	TCNGA	6 cut(s)	319, 435, 738, 1102, 1303, 1345
Hpy8I	GTNNAC	4 cut(s)	145, 864, 979, 1662
Hpy99I	CGWCG	1 cut(s)	152
HpyAV	CCTTC	9 cut(s)	481, 489, 558, 615, 788, 966, 1149, 1598, 1783
HpyCH4IV	ACGT	1 cut(s)	1758
HpyCH4V	TGCA	9 cut(s)	214, 404, 442, 731, 934, 965, 988, 1569, 1654
HpyF10VI	GCNNNNNNNGC	7 cut(s)	632, 654, 804, 947, 1396, 1566, 1695
HpySE526I	ACGT	1 cut(s)	1758
Hsp92II	CATG	4 cut(s)	442, 446, 529, 1240
HspAI	GCGC	4 cut(s)	633, 888, 911, 1388
KflI	GGGWCCC	1 cut(s)	56
Kpn2I	TCCGGA	1 cut(s)	14
Ksp22I	TGATCA	1 cut(s)	1198
LmnI	GCTCC	6 cut(s)	113, 286, 499, 1024, 1695, 1787
Lsp1109I	GCAGC	7 cut(s)	92, 136, 240, 934, 1324, 1698, 1710
LweI	GCATC	6 cut(s)	712, 899, 909, 958, 975, 1346
MabI	ACCWGGT	1 cut(s)	412
MaeI	CTAG	4 cut(s)	462, 1079, 1187, 1763
MaeII	ACGT	1 cut(s)	1758
MaeIII	GTNAC	2 cut(s)	95, 1265
MboII	GAAGA	8 cut(s)	194, 712, 951, 1097, 1301, 1353, 1626, 1735
MflI	RGATCY	6 cut(s)	101, 131, 239, 991, 1563, 1631
MhlI	GDGCHC	1 cut(s)	504
MlsI	TGGCCA	1 cut(s)	807
MluCI	AATT	9 cut(s)	244, 829, 850, 1045, 1073, 1110, 1435, 1483, 1507
MluNI	TGGCCA	1 cut(s)	807
MlyI	GAGTC	1 cut(s)	268
MmeI	TCCRAC	2 cut(s)	918, 1065
Mox20I	TGGCCA	1 cut(s)	807
Mph1103I	ATGCAT	1 cut(s)	444
MroI	TCCGGA	1 cut(s)	14
MroXI	GAANNNNTTC	1 cut(s)	1114
MscI	TGGCCA	1 cut(s)	807
MseI	TTAA	4 cut(s)	759, 1029, 1590, 1598
Msp20I	TGGCCA	1 cut(s)	807
MspA1I	CMGCKG	4 cut(s)	83, 253, 269, 1399
MspCI	CTTAAG	1 cut(s)	1028
MspI	CCGG	4 cut(s)	15, 66, 140, 1411
Mva1269I	GAATGC	2 cut(s)	196, 406
MvaI	CCWGG	8 cut(s)	199, 221, 414, 506, 675, 804, 809, 1501
MvnI	CGCG	1 cut(s)	911
MwoI	GCNNNNNNNGC	7 cut(s)	632, 654, 804, 947, 1396, 1566, 1695
NciI	CCSGG	2 cut(s)	1411, 1412
NlaIII	CATG	4 cut(s)	442, 446, 529, 1240
NlaIV	GGNNCC	8 cut(s)	57, 58, 109, 469, 767, 823, 843, 1521
NmeAIII	GCCGAG	1 cut(s)	31
NmuCI	GTSAC	2 cut(s)	95, 1265
NsiI	ATGCAT	1 cut(s)	444
NspI	RCATGY	1 cut(s)	442
PaeI	GCATGC	1 cut(s)	442
PaeR7I	CTCGAG	1 cut(s)	715
PasI	CCCWGGG	1 cut(s)	1500
PceI	AGGCCT	1 cut(s)	509
PctI	GAATGC	2 cut(s)	196, 406
PdmI	GAANNNNTTC	1 cut(s)	1114
PfeI	GAWTC	4 cut(s)	367, 430, 1088, 1463
PflMI	CCANNNNNTGG	2 cut(s)	419, 1237
PfoI	TCCNGGA	1 cut(s)	197
PkrI	GCNGC	9 cut(s)	82, 126, 255, 770, 949, 1314, 1587, 1688, 1700
PleI	GAGTC	1 cut(s)	268
PpsI	GAGTC	1 cut(s)	268
PpuMI	RGGWCCY	4 cut(s)	56, 159, 467, 1520
Psp5II	RGGWCCY	4 cut(s)	56, 159, 467, 1520
Psp6I	CCWGG	8 cut(s)	197, 219, 412, 504, 673, 802, 807, 1499
PspGI	CCWGG	8 cut(s)	197, 219, 412, 504, 673, 802, 807, 1499
PspN4I	GGNNCC	8 cut(s)	57, 58, 109, 469, 767, 823, 843, 1521
PspPI	GGNCC	9 cut(s)	56, 159, 446, 467, 602, 766, 822, 1255, 1520
PspPPI	RGGWCCY	4 cut(s)	56, 159, 467, 1520
PstI	CTGCAG	1 cut(s)	967
PsuI	RGATCY	6 cut(s)	101, 131, 239, 991, 1563, 1631
PvuII	CAGCTG	2 cut(s)	253, 269
RsaI	GTAC	2 cut(s)	218, 524
RsaNI	GTAC	2 cut(s)	217, 523
SaqAI	TTAA	4 cut(s)	759, 1029, 1590, 1598
SatI	GCNGC	9 cut(s)	81, 125, 254, 769, 948, 1313, 1586, 1687, 1699
Sau96I	GGNCC	9 cut(s)	56, 159, 446, 467, 602, 766, 822, 1255, 1520
SchI	GAGTC	1 cut(s)	268
SduI	GDGCHC	1 cut(s)	504
SexAI	ACCWGGT	1 cut(s)	412
SfaNI	GCATC	6 cut(s)	712, 899, 909, 958, 975, 1346
SfcI	CTRYAG	1 cut(s)	963
SfiI	GGCCNNNNNGGCC	1 cut(s)	804
Sfr274I	CTCGAG	1 cut(s)	715
SinI	GGWCC	7 cut(s)	56, 159, 467, 602, 822, 1255, 1520
SlaI	CTCGAG	1 cut(s)	715
SmaI	CCCGGG	1 cut(s)	1412
SmlI	CTYRAG	4 cut(s)	569, 715, 1028, 1209
SmoI	CTYRAG	4 cut(s)	569, 715, 1028, 1209
SphI	GCATGC	1 cut(s)	442
Sse9I	AATT	9 cut(s)	244, 829, 850, 1045, 1073, 1110, 1435, 1483, 1507
SseBI	AGGCCT	1 cut(s)	509
SsiI	CCGC	8 cut(s)	83, 111, 117, 769, 909, 1223, 1397, 1586
SspMI	CTAG	4 cut(s)	462, 1079, 1187, 1763
StuI	AGGCCT	1 cut(s)	509
StyI	CCWWGG	1 cut(s)	395
TaiI	ACGT	1 cut(s)	1761
TaqI	TCGA	4 cut(s)	716, 1049, 1325, 1769
TasI	AATT	9 cut(s)	244, 829, 850, 1045, 1073, 1110, 1435, 1483, 1507
TatI	WGTACW	1 cut(s)	522
TauI	GCSGC	2 cut(s)	771, 1588
TfiI	GAWTC	4 cut(s)	367, 430, 1088, 1463
Tru1I	TTAA	4 cut(s)	759, 1029, 1590, 1598
Tru9I	TTAA	4 cut(s)	759, 1029, 1590, 1598
TscAI	CASTG	3 cut(s)	491, 1201, 1561
TseFI	GTSAC	2 cut(s)	95, 1265
TseI	GCWGC	7 cut(s)	80, 124, 253, 947, 1312, 1686, 1698
Tsp45I	GTSAC	2 cut(s)	95, 1265
TspDTI	ATGAA	4 cut(s)	863, 1225, 1448, 1617
TspGWI	ACGGA	3 cut(s)	114, 859, 997
TspMI	CCCGGG	1 cut(s)	1410
TspRI	CASTG	3 cut(s)	491, 1201, 1561
Van91I	CCANNNNNTGG	2 cut(s)	419, 1237
Vha464I	CTTAAG	1 cut(s)	1028
VpaK11BI	GGWCC	7 cut(s)	56, 159, 467, 602, 822, 1255, 1520
XagI	CCTNNNNNAGG	1 cut(s)	792
XapI	RAATTY	4 cut(s)	850, 1073, 1435, 1507
XceI	RCATGY	1 cut(s)	442
XcmI	CCANNNNNNNNNTGG	2 cut(s)	815, 1103
XhoI	CTCGAG	1 cut(s)	715
XmaI	CCCGGG	1 cut(s)	1410
XmnI	GAANNNNTTC	1 cut(s)	1114
XspI	CTAG	4 cut(s)	462, 1079, 1187, 1763
Zsp2I	ATGCAT	1 cut(s)	444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.