Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0001679

Physical Location & Seq

Genomic Coordinates Reverse (-)

17428479 .. 17432083

Gene Structure 3605 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1189500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1782 bp

ATGGATTTTGGGGTGATGGGTTTGGAGGGTTTGGTGGGTCCCGACGCCGGAGGAGGAGAGGCAGCGGAAAATGTTGGTGACGGATCTGGCTCCGCCTCCGCCAAGCAGCAAAGATCTTGGCCGGCGGAGGACGACTGGAGGGACTCAAAAATGCTGAAAAACGAAGACTTGAATTCCCCCAAGACAATGCCATTGCAGTACCAGGGGACTCCTCTGCTGAGATCTAATTCTCAACTGCTTCCACCTCCAGCTGAGTCTCACAGGCAGGAGCAAATGCTGAGCTTTTCCAACAACAAATCAGAAAGCTTTCTCAACAGAGATAGAGACTTTGCCTACTACCAGAGGAATCCCACTCCCATTCCCTCTCCTTACCCAAGGAATGCAGGCTCACCAGGTTATGGAAGCTTGAATCTGAGCATGCATGGGACTTTTACTGGGGCTAGAGGACCCTTCACTCCTTCTCAGTGGATTGAGCTGGAGCACCAGGCCTTGATCTACAAGTACATGACTTCAAATGTGCCTGTCCCTTCCAATCTGCTCATACCTATCAAGAAATCCCTCTACCCTTATGGCTTGTCTGGTCCGTCTAATCCCACCTCAATAGCGTGGGGCGCTTACCATCTGGGATTTTCTGGCAACAATGATCCTGAACCTGGGAGGTGTCGCCGAACAGATGGGAAGAAATGGCGTTGCTCGAGAGATGCTGTTGCAGATCAGAAGTATTGTGAAAGGCACATCAACAGGGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAGCCTGGCCAGGCCGTCTCTGGGACCAGTAATTCAAAGAGGGTACCTATGAATTCGTCAATGTCAACGTCAGTGATGCCAAGCAGTGGTGTATCCAGCAGCCTCACGACCGCACAGCAGCAATTCAAAAGCTTGCAGCCTGCTGTTGCTGTCAATCCTTCTGCAGATGCCTTTGTCAACAGGATGCAGGGTCAACAGGGAGTTTCCGTGATGTCTGCCCCTACCCTTAAGCCGAAATCCAACAAGTCTACTTATAACATTGGGAAACAAGAATTCCTAGTGGAAGAAGCCTCCCAAGCAGAGTTTGGACTTGTTTCCACTGATTCACTTCTCAACCCTTCACATAGGAACTCTTACATTTCTAAAGACTTTAGTGGTTCTTTCCTACACTTTGGTGATCAAGATACTCAAGACCATCATCCGCTTCGCCAGTTCATGGATGATTGGCCCAAGGACCAATCCTGTCACTCAGTCTCTACTTGGCCTGAAGAAGTAAAATCAGACTGGACTCAGCTATCAATGTCAATTCCTATGGCATCCTCGGAGTTCTCATCATCCTCTTCCTCGCCAAAGCATGAGAAACTTGCGCTCTCACCGCTGAGGCTATCCCGGGAGTTTGAGCCTGCCCAAATGAATTTGGGAATAAGCAATGACATTAGCGAATCAAGCCAGAAGCAAACTAACTGGATACCTATCGCTTGGGGAAATTCAATGGGGGGTCCTTTAGGAGAGGTCCTAACCAAAACCACCAGTGGTGGCAGCAAGATCTGCATTAACTCAAAATCCCCACTTGGCCTCTTAAATGAAGGGTGGGATGGCAGCCCTCAGTTGGGATCTTCCCCAACTGGCGTCTTGCAGAAGTCAACTTTCTGTTCGCTTTCAAACAGCAGCTCAGGGAGCAGCCCGAGAGGAGGTGAGAACAAGAAGAGTAGTCTTGACGTGGCGAGCATTTATGATGACGTGCCAGGTTCAACCTTTGCAAGTTCCTCAGTTCCATCCCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

QLQ WRC

Protein Analysis

594

Amino Acids

64.28

Weight (kDa)

7.65

Isoelectric Point (pI)

56.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
QLQ	PF08880	150 - 183	6.7e-15	QLQ
WRC	PF08879	216 - 258	1.1e-20	WRC

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001679)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22840 AT4G37740
fragaria_vesca	FvH4_1g18220 FvH4_2g32670 FvH4_2g32670 FvH4_2g32670 FvH4_2g32671
malus_domestica	MD02G1189500.v1.1 MD04G1215900.v1.1 MD15G1065000.v1.1 MD15G1300900.v1.1
prunus_persica	Prupe.1G419000_v2.0.a1 Prupe.1G419000_v2.0.a1 Prupe.1G419200_v2.0.a1 Prupe.6G217000_v2.0.a1
pyrus_communis	pycom02g15360 pycom08g06450 pycom15g26320
rosa_chinensis	RchiOBHm_Chr2g0108741 RchiOBHm_Chr6g0310031 RchiOBHm_Chr6g0310051
rosa_laevigata	RLG00000010515 RLG00000010516 RLG00000017688
rosa_multiflora	Rmu_sc0000294.1_g000016 Rmu_sc0010317.1_g000012
rosa_roxburghii	Rroxscaffold_2G00134850 Rroxscaffold_7G00158930 Rroxscaffold_7G00158940
rosa_rugosa	Rorug02G0155400 Rorug02G0155400 Rorug06G0377000 Rorug06G0377100 Rorug06G0377100 Rorug06G0377200
rosa_samantha	Rh2AG205600 Rh2BG217300 Rh2CG208500 Rh2DG211800 Rh6AG490600 Rh6AG490700 Rh6BG500100 Rh6BG500200 Rh6CG505000 Rh6CG505100 Rh6DG491000 Rh6DG491100
rosa_wichuraiana	Rw2G016360 Rw6G042700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1032
Acc65I	GGTACC	1 cut(s)	820
AccB1I	GGYRCC	1 cut(s)	820
AccB7I	CCANNNNNTGG	3 cut(s)	398, 863, 1213
AccI	GTMKAC	1 cut(s)	1025
AciI	CCGC	7 cut(s)	65, 93, 99, 125, 888, 1199, 1373
AclWI	GGATC	3 cut(s)	91, 638, 1618
AcoI	YGGCCR	2 cut(s)	119, 784
AcsI	RAATTY	5 cut(s)	172, 829, 1049, 1411, 1483
AcuI	CTGAAG	1 cut(s)	1284
AcyI	GRCGYC	3 cut(s)	45, 748, 1626
AfaI	GTAC	3 cut(s)	200, 503, 822
AflII	CTTAAG	1 cut(s)	1004
AgsI	TTSAA	9 cut(s)	172, 409, 513, 759, 813, 904, 1488, 1659, 1749
AjiI	CACGTC	2 cut(s)	1717, 1738
AjnI	CCWGG	7 cut(s)	201, 391, 483, 652, 781, 786, 1741
AleI	CACNNNNGTG	1 cut(s)	1170
AluBI	AGCT	8 cut(s)	251, 282, 306, 405, 475, 909, 1291, 1668
AluI	AGCT	8 cut(s)	251, 282, 306, 405, 475, 909, 1291, 1668
Alw21I	GWGCWC	1 cut(s)	483
Alw26I	GTCTC	4 cut(s)	261, 318, 799, 1255
AlwI	GGATC	3 cut(s)	91, 638, 1618
Ama87I	CYCGRG	3 cut(s)	694, 1386, 1681
AoxI	GGCC	8 cut(s)	119, 486, 775, 784, 789, 1223, 1259, 1570
ApeKI	GCWGC	9 cut(s)	62, 106, 876, 895, 913, 1536, 1596, 1665, 1677
ApoI	RAATTY	5 cut(s)	172, 829, 1049, 1411, 1483
Asp700I	GAANNNNTTC	1 cut(s)	306
Asp718I	GGTACC	1 cut(s)	820
AspLEI	GCGC	2 cut(s)	614, 1366
AspS9I	GGNCC	8 cut(s)	38, 446, 581, 801, 1224, 1231, 1496, 1510
AsuC2I	CCSGG	2 cut(s)	1387, 1388
AsuHPI	GGTGA	6 cut(s)	25, 89, 381, 1184, 1362, 1703
AvaI	CYCGRG	3 cut(s)	694, 1386, 1681
AvaII	GGWCC	7 cut(s)	38, 446, 581, 801, 1231, 1496, 1510
BalI	TGGCCA	1 cut(s)	786
BanI	GGYRCC	1 cut(s)	820
BbsI	GAAGAC	1 cut(s)	171
Bbv12I	GWGCWC	1 cut(s)	483
BbvCI	CCTCAGC	1 cut(s)	1376
BbvI	GCAGC	9 cut(s)	74, 118, 888, 907, 925, 1548, 1608, 1677, 1689
BccI	CCATC	7 cut(s)	10, 627, 668, 759, 1200, 1586, 1780
BceAI	ACGGC	1 cut(s)	776
BciT130I	CCWGG	7 cut(s)	203, 393, 485, 654, 783, 788, 1743
BciVI	GTATCC	2 cut(s)	880, 1458
BclI	TGATCA	1 cut(s)	1174
BcnI	CCSGG	2 cut(s)	1387, 1388
BcoDI	GTCTC	4 cut(s)	261, 318, 799, 1255
BfaI	CTAG	2 cut(s)	441, 1055
BfmI	CTRYAG	1 cut(s)	939
BfoI	RGCGCY	1 cut(s)	615
BfrI	CTTAAG	1 cut(s)	1004
BfuI	GTATCC	2 cut(s)	880, 1458
BglI	GCCNNNNNGGC	1 cut(s)	783
BglII	AGATCT	3 cut(s)	113, 221, 1542
BisI	GCNGC	9 cut(s)	63, 107, 877, 896, 914, 1537, 1597, 1666, 1678
BlpI	GCTNAGC	1 cut(s)	278
BlsI	GCNGC	9 cut(s)	64, 108, 878, 897, 915, 1538, 1598, 1667, 1679
Bme1390I	CCNGG	9 cut(s)	203, 393, 485, 654, 783, 788, 1387, 1388, 1743
Bme18I	GGWCC	7 cut(s)	38, 446, 581, 801, 1231, 1496, 1510
BmeT110I	CYCGRG	3 cut(s)	694, 1386, 1681
BmgBI	CACGTC	2 cut(s)	1717, 1738
BmgT120I	GGNCC	8 cut(s)	38, 446, 581, 801, 1224, 1231, 1496, 1510
BmiI	GGNNCC	7 cut(s)	39, 40, 91, 448, 802, 822, 1497
BmrFI	CCNGG	9 cut(s)	203, 393, 485, 654, 783, 788, 1387, 1388, 1743
BmrI	ACTGGG	1 cut(s)	444
BmsI	GCATC	5 cut(s)	691, 843, 934, 951, 1322
BmuI	ACTGGG	1 cut(s)	444
BpiI	GAAGAC	1 cut(s)	171
BpmI	CTGGAG	3 cut(s)	157, 231, 497
Bpu10I	CCTNAGC	2 cut(s)	1376, 1669
Bpu1102I	GCTNAGC	1 cut(s)	278
BpuEI	CTTGAG	1 cut(s)	1170
BpuMI	CCSGG	2 cut(s)	1387, 1388
BsaBI	GATNNNNATC	1 cut(s)	1469
BsaHI	GRCGYC	3 cut(s)	45, 748, 1626
BsaJI	CCNNGG	6 cut(s)	202, 374, 653, 1227, 1317, 1386
BsaXI	ACNNNNNCTCC	2 cut(s)	969, 999
Bse118I	RCCGGY	1 cut(s)	121
Bse1I	ACTGG	8 cut(s)	140, 439, 804, 1207, 1286, 1466, 1527, 1627
Bse3DI	GCAATG	2 cut(s)	191, 1432
Bse8I	GATNNNNATC	1 cut(s)	1469
BseBI	CCWGG	7 cut(s)	203, 393, 485, 654, 783, 788, 1743
BseDI	CCNNGG	6 cut(s)	202, 374, 653, 1227, 1317, 1386
BseGI	GGATG	7 cut(s)	966, 1195, 1222, 1313, 1331, 1597, 1772
BseJI	GATNNNNATC	1 cut(s)	1469
BseMI	GCAATG	2 cut(s)	191, 1432
BseNI	ACTGG	8 cut(s)	140, 439, 804, 1207, 1286, 1466, 1527, 1627
BseRI	GAGGAG	4 cut(s)	66, 69, 201, 1701
BseXI	GCAGC	9 cut(s)	74, 118, 888, 907, 925, 1548, 1608, 1677, 1689
Bsh1285I	CGRYCG	1 cut(s)	888
BshFI	GGCC	8 cut(s)	121, 488, 777, 786, 791, 1225, 1261, 1572
BshNI	GGYRCC	1 cut(s)	820
BsiEI	CGRYCG	1 cut(s)	888
BsiHKAI	GWGCWC	1 cut(s)	483
BsiHKCI	CYCGRG	3 cut(s)	694, 1386, 1681
BsiSI	CCGG	3 cut(s)	48, 122, 1387
BslFI	GGGAC	7 cut(s)	24, 155, 220, 439, 509, 759, 814
BsmAI	GTCTC	4 cut(s)	261, 318, 799, 1255
BsmBI	CGTCTC	1 cut(s)	799
BsmFI	GGGAC	7 cut(s)	24, 155, 220, 439, 509, 759, 814
BsmI	GAATGC	1 cut(s)	385
BsnI	GGCC	8 cut(s)	121, 488, 777, 786, 791, 1225, 1261, 1572
BsoBI	CYCGRG	3 cut(s)	694, 1386, 1681
Bsp1286I	GDGCHC	1 cut(s)	483
Bsp143I	GATC	9 cut(s)	83, 113, 221, 492, 643, 712, 1174, 1542, 1610
Bsp1720I	GCTNAGC	1 cut(s)	278
BspACI	CCGC	7 cut(s)	65, 93, 99, 125, 888, 1199, 1373
BspANI	GGCC	8 cut(s)	121, 488, 777, 786, 791, 1225, 1261, 1572
BspLI	GGNNCC	7 cut(s)	39, 40, 91, 448, 802, 822, 1497
BspMAI	CTGCAG	1 cut(s)	943
BspPI	GGATC	3 cut(s)	91, 638, 1618
BspT107I	GGYRCC	1 cut(s)	820
BspTI	CTTAAG	1 cut(s)	1004
BsrDI	GCAATG	2 cut(s)	191, 1432
BsrFI	RCCGGY	1 cut(s)	121
BsrI	ACTGG	8 cut(s)	140, 439, 804, 1207, 1286, 1466, 1527, 1627
BssAI	RCCGGY	1 cut(s)	121
BssECI	CCNNGG	6 cut(s)	202, 374, 653, 1227, 1317, 1386
BssMI	GATC	9 cut(s)	83, 113, 221, 492, 643, 712, 1174, 1542, 1610
BssNI	GRCGYC	3 cut(s)	45, 748, 1626
BssT1I	CCWWGG	2 cut(s)	374, 1227
Bst2UI	CCWGG	7 cut(s)	203, 393, 485, 654, 783, 788, 1743
Bst6I	CTCTTC	2 cut(s)	1342, 1697
BstACI	GRCGYC	3 cut(s)	45, 748, 1626
BstAFI	CTTAAG	1 cut(s)	1004
BstAPI	GCANNNNNTGC	1 cut(s)	1545
BstC8I	GCNNGC	8 cut(s)	123, 385, 419, 779, 911, 918, 1401, 1723
BstENI	CCTNNNNNAGG	1 cut(s)	771
BstF5I	GGATG	7 cut(s)	966, 1195, 1222, 1313, 1331, 1597, 1772
BstH2I	RGCGCY	1 cut(s)	615
BstHHI	GCGC	2 cut(s)	614, 1366
BstKTI	GATC	9 cut(s)	86, 116, 224, 495, 646, 715, 1177, 1545, 1613
BstMAI	GTCTC	4 cut(s)	261, 318, 799, 1255
BstMBI	GATC	9 cut(s)	83, 113, 221, 492, 643, 712, 1174, 1542, 1610
BstMCI	CGRYCG	1 cut(s)	888
BstMWI	GCNNNNNNNGC	7 cut(s)	611, 783, 1073, 1372, 1443, 1545, 1674
BstNI	CCWGG	7 cut(s)	203, 393, 485, 654, 783, 788, 1743
BstNSI	RCATGY	1 cut(s)	421
BstSCI	CCNGG	9 cut(s)	201, 391, 483, 652, 781, 786, 1385, 1386, 1741
BstSFI	CTRYAG	1 cut(s)	939
BstV1I	GCAGC	9 cut(s)	74, 118, 888, 907, 925, 1548, 1608, 1677, 1689
BstV2I	GAAGAC	1 cut(s)	171
BstX2I	RGATCY	5 cut(s)	83, 113, 221, 1542, 1610
BstYI	RGATCY	5 cut(s)	83, 113, 221, 1542, 1610
BsuI	GTATCC	2 cut(s)	880, 1458
BsuRI	GGCC	8 cut(s)	121, 488, 777, 786, 791, 1225, 1261, 1572
BtrI	CACGTC	2 cut(s)	1717, 1738
BtsCI	GGATG	7 cut(s)	966, 1195, 1222, 1313, 1331, 1597, 1772
BtsI	GCAGTG	1 cut(s)	868
BtsIMutI	CAGTG	5 cut(s)	470, 855, 868, 1095, 1534
Cac8I	GCNNGC	8 cut(s)	123, 385, 419, 779, 911, 918, 1401, 1723
CfoI	GCGC	2 cut(s)	614, 1366
Cfr10I	RCCGGY	1 cut(s)	121
Cfr13I	GGNCC	8 cut(s)	38, 446, 581, 801, 1224, 1231, 1496, 1510
Cfr9I	CCCGGG	1 cut(s)	1386
CseI	GACGC	3 cut(s)	53, 756, 1615
CsiI	ACCWGGT	1 cut(s)	391
Csp6I	GTAC	3 cut(s)	199, 502, 821
CviAII	CATG	5 cut(s)	418, 422, 505, 1213, 1352
CviQI	GTAC	3 cut(s)	199, 502, 821
DpnI	GATC	9 cut(s)	85, 115, 223, 494, 645, 714, 1176, 1544, 1612
DpnII	GATC	9 cut(s)	83, 113, 221, 492, 643, 712, 1174, 1542, 1610
EaeI	YGGCCR	2 cut(s)	119, 784
Eam1104I	CTCTTC	2 cut(s)	1342, 1697
EarI	CTCTTC	2 cut(s)	1342, 1697
EciI	GGCGGA	3 cut(s)	82, 88, 140
Eco130I	CCWWGG	2 cut(s)	374, 1227
Eco147I	AGGCCT	1 cut(s)	488
Eco47I	GGWCC	7 cut(s)	38, 446, 581, 801, 1231, 1496, 1510
Eco57I	CTGAAG	1 cut(s)	1284
Eco88I	CYCGRG	3 cut(s)	694, 1386, 1681
EcoNI	CCTNNNNNAGG	1 cut(s)	771
EcoO109I	RGGNCCY	4 cut(s)	38, 446, 1496, 1510
EcoRI	GAATTC	3 cut(s)	172, 829, 1049
EcoRII	CCWGG	7 cut(s)	201, 391, 483, 652, 781, 786, 1741
EcoT14I	CCWWGG	2 cut(s)	374, 1227
EcoT22I	ATGCAT	1 cut(s)	423
ErhI	CCWWGG	2 cut(s)	374, 1227
Esp3I	CGTCTC	1 cut(s)	799
FaeI	CATG	5 cut(s)	421, 425, 508, 1216, 1355
FaqI	GGGAC	7 cut(s)	24, 155, 220, 439, 509, 759, 814
FatI	CATG	5 cut(s)	417, 421, 504, 1212, 1351
FbaI	TGATCA	1 cut(s)	1174
FblI	GTMKAC	1 cut(s)	1025
Fnu4HI	GCNGC	9 cut(s)	63, 107, 877, 896, 914, 1537, 1597, 1666, 1678
FokI	GGATG	7 cut(s)	973, 1182, 1229, 1300, 1318, 1604, 1759
Fsp4HI	GCNGC	9 cut(s)	63, 107, 877, 896, 914, 1537, 1597, 1666, 1678
FspBI	CTAG	2 cut(s)	441, 1055
GlaI	GCGC	2 cut(s)	613, 1365
GluI	GCNGC	9 cut(s)	63, 107, 877, 896, 914, 1537, 1597, 1666, 1678
GsuI	CTGGAG	3 cut(s)	157, 231, 497
HaeII	RGCGCY	1 cut(s)	615
HaeIII	GGCC	8 cut(s)	121, 488, 777, 786, 791, 1225, 1261, 1572
HapII	CCGG	3 cut(s)	48, 122, 1387
HgaI	GACGC	3 cut(s)	53, 756, 1615
HhaI	GCGC	2 cut(s)	614, 1366
Hin1I	GRCGYC	3 cut(s)	45, 748, 1626
Hin1II	CATG	5 cut(s)	421, 425, 508, 1216, 1355
Hin6I	GCGC	2 cut(s)	612, 1364
HinP1I	GCGC	2 cut(s)	612, 1364
HincII	GTYRAC	4 cut(s)	843, 955, 971, 1641
HindII	GTYRAC	4 cut(s)	843, 955, 971, 1641
HindIII	AAGCTT	3 cut(s)	304, 403, 907
HinfI	GANTC	8 cut(s)	143, 208, 254, 346, 409, 1100, 1285, 1439
HpaII	CCGG	3 cut(s)	48, 122, 1387
HphI	GGTGA	6 cut(s)	25, 89, 381, 1184, 1362, 1703
Hpy166II	GTNNAC	5 cut(s)	843, 955, 971, 1026, 1641
Hpy188I	TCNGA	5 cut(s)	301, 414, 717, 1279, 1321
Hpy188III	TCNNGA	9 cut(s)	41, 550, 647, 696, 759, 883, 1178, 1187, 1712
Hpy8I	GTNNAC	5 cut(s)	843, 955, 971, 1026, 1641
Hpy99I	CGWCG	1 cut(s)	47
HpyAV	CCTTC	7 cut(s)	460, 468, 537, 767, 945, 1125, 1577
HpyCH4IV	ACGT	3 cut(s)	845, 1716, 1737
HpyF10VI	GCNNNNNNNGC	7 cut(s)	611, 783, 1073, 1372, 1443, 1545, 1674
HpySE526I	ACGT	3 cut(s)	845, 1716, 1737
Hsp92I	GRCGYC	3 cut(s)	45, 748, 1626
Hsp92II	CATG	5 cut(s)	421, 425, 508, 1216, 1355
HspAI	GCGC	2 cut(s)	612, 1364
KflI	GGGWCCC	1 cut(s)	38
KpnI	GGTACC	1 cut(s)	824
KroI	GCCGGC	1 cut(s)	121
KroNI	GCCGGC	1 cut(s)	123
Ksp22I	TGATCA	1 cut(s)	1174
Kzo9I	GATC	9 cut(s)	83, 113, 221, 492, 643, 712, 1174, 1542, 1610
LmnI	GCTCC	4 cut(s)	95, 268, 478, 1674
Lsp1109I	GCAGC	9 cut(s)	74, 118, 888, 907, 925, 1548, 1608, 1677, 1689
LweI	GCATC	5 cut(s)	691, 843, 934, 951, 1322
MabI	ACCWGGT	1 cut(s)	391
MaeI	CTAG	2 cut(s)	441, 1055
MaeII	ACGT	3 cut(s)	845, 1716, 1737
MaeIII	GTNAC	2 cut(s)	77, 1241
MalI	GATC	9 cut(s)	85, 115, 223, 494, 645, 714, 1176, 1544, 1612
MboI	GATC	9 cut(s)	83, 113, 221, 492, 643, 712, 1174, 1542, 1610
MboII	GAAGA	7 cut(s)	176, 691, 1073, 1277, 1329, 1605, 1714
MflI	RGATCY	5 cut(s)	83, 113, 221, 1542, 1610
MhlI	GDGCHC	1 cut(s)	483
MlsI	TGGCCA	1 cut(s)	786
MluCI	AATT	9 cut(s)	172, 226, 808, 829, 899, 1049, 1302, 1411, 1483
MluNI	TGGCCA	1 cut(s)	786
MlyI	GAGTC	4 cut(s)	137, 202, 263, 1279
MmeI	TCCRAC	2 cut(s)	312, 1041
Mox20I	TGGCCA	1 cut(s)	786
Mph1103I	ATGCAT	1 cut(s)	423
MroNI	GCCGGC	1 cut(s)	121
MroXI	GAANNNNTTC	1 cut(s)	306
MscI	TGGCCA	1 cut(s)	786
MseI	TTAA	3 cut(s)	1005, 1551, 1577
MslI	CAYNNNNRTG	1 cut(s)	1170
Msp20I	TGGCCA	1 cut(s)	786
MspA1I	CMGCKG	3 cut(s)	65, 251, 1375
MspCI	CTTAAG	1 cut(s)	1004
MspI	CCGG	3 cut(s)	48, 122, 1387
MspR9I	CCNGG	9 cut(s)	203, 393, 485, 654, 783, 788, 1387, 1388, 1743
Mva1269I	GAATGC	1 cut(s)	385
MvaI	CCWGG	7 cut(s)	203, 393, 485, 654, 783, 788, 1743
MwoI	GCNNNNNNNGC	7 cut(s)	611, 783, 1073, 1372, 1443, 1545, 1674
NaeI	GCCGGC	1 cut(s)	123
NciI	CCSGG	2 cut(s)	1387, 1388
NdeII	GATC	9 cut(s)	83, 113, 221, 492, 643, 712, 1174, 1542, 1610
NgoMIV	GCCGGC	1 cut(s)	121
NlaIII	CATG	5 cut(s)	421, 425, 508, 1216, 1355
NlaIV	GGNNCC	7 cut(s)	39, 40, 91, 448, 802, 822, 1497
NmuCI	GTSAC	2 cut(s)	77, 1241
NsiI	ATGCAT	1 cut(s)	423
NspI	RCATGY	1 cut(s)	421
OliI	CACNNNNGTG	1 cut(s)	1170
PaeI	GCATGC	1 cut(s)	421
PaeR7I	CTCGAG	1 cut(s)	694
PceI	AGGCCT	1 cut(s)	488
PctI	GAATGC	1 cut(s)	385
PdiI	GCCGGC	1 cut(s)	123
PdmI	GAANNNNTTC	1 cut(s)	306
PfeI	GAWTC	4 cut(s)	346, 409, 1100, 1439
PflMI	CCANNNNNTGG	3 cut(s)	398, 863, 1213
PkrI	GCNGC	9 cut(s)	64, 108, 878, 897, 915, 1538, 1598, 1667, 1679
PleI	GAGTC	4 cut(s)	137, 202, 262, 1279
PpsI	GAGTC	4 cut(s)	137, 202, 262, 1279
PpuMI	RGGWCCY	4 cut(s)	38, 446, 1496, 1510
PsiI	TTATAA	1 cut(s)	1032
Psp5II	RGGWCCY	4 cut(s)	38, 446, 1496, 1510
Psp6I	CCWGG	7 cut(s)	201, 391, 483, 652, 781, 786, 1741
PspGI	CCWGG	7 cut(s)	201, 391, 483, 652, 781, 786, 1741
PspN4I	GGNNCC	7 cut(s)	39, 40, 91, 448, 802, 822, 1497
PspPI	GGNCC	8 cut(s)	38, 446, 581, 801, 1224, 1231, 1496, 1510
PspPPI	RGGWCCY	4 cut(s)	38, 446, 1496, 1510
PstI	CTGCAG	1 cut(s)	943
PsuI	RGATCY	5 cut(s)	83, 113, 221, 1542, 1610
PvuII	CAGCTG	1 cut(s)	251
RsaI	GTAC	3 cut(s)	200, 503, 822
RsaNI	GTAC	3 cut(s)	199, 502, 821
RseI	CAYNNNNRTG	1 cut(s)	1170
SaqAI	TTAA	3 cut(s)	1005, 1551, 1577
SatI	GCNGC	9 cut(s)	63, 107, 877, 896, 914, 1537, 1597, 1666, 1678
Sau3AI	GATC	9 cut(s)	83, 113, 221, 492, 643, 712, 1174, 1542, 1610
Sau96I	GGNCC	8 cut(s)	38, 446, 581, 801, 1224, 1231, 1496, 1510
SchI	GAGTC	4 cut(s)	137, 202, 263, 1279
ScrFI	CCNGG	9 cut(s)	203, 393, 485, 654, 783, 788, 1387, 1388, 1743
SduI	GDGCHC	1 cut(s)	483
SexAI	ACCWGGT	1 cut(s)	391
SfaNI	GCATC	5 cut(s)	691, 843, 934, 951, 1322
SfcI	CTRYAG	1 cut(s)	939
SfiI	GGCCNNNNNGGCC	1 cut(s)	783
Sfr274I	CTCGAG	1 cut(s)	694
SinI	GGWCC	7 cut(s)	38, 446, 581, 801, 1231, 1496, 1510
SlaI	CTCGAG	1 cut(s)	694
SmaI	CCCGGG	1 cut(s)	1388
SmiMI	CAYNNNNRTG	1 cut(s)	1170
SmlI	CTYRAG	3 cut(s)	694, 1004, 1185
SmoI	CTYRAG	3 cut(s)	694, 1004, 1185
SphI	GCATGC	1 cut(s)	421
Sse9I	AATT	9 cut(s)	172, 226, 808, 829, 899, 1049, 1302, 1411, 1483
SseBI	AGGCCT	1 cut(s)	488
SsiI	CCGC	7 cut(s)	65, 93, 99, 125, 888, 1199, 1373
SspMI	CTAG	2 cut(s)	441, 1055
StuI	AGGCCT	1 cut(s)	488
StyD4I	CCNGG	9 cut(s)	201, 391, 483, 652, 781, 786, 1385, 1386, 1741
StyI	CCWWGG	2 cut(s)	374, 1227
TaiI	ACGT	3 cut(s)	848, 1719, 1740
TaqI	TCGA	1 cut(s)	695
TasI	AATT	9 cut(s)	172, 226, 808, 829, 899, 1049, 1302, 1411, 1483
TatI	WGTACW	1 cut(s)	501
TfiI	GAWTC	4 cut(s)	346, 409, 1100, 1439
Tru1I	TTAA	3 cut(s)	1005, 1551, 1577
Tru9I	TTAA	3 cut(s)	1005, 1551, 1577
TscAI	CASTG	5 cut(s)	470, 855, 868, 1102, 1534
TseFI	GTSAC	2 cut(s)	77, 1241
TseI	GCWGC	9 cut(s)	62, 106, 876, 895, 913, 1536, 1596, 1665, 1677
Tsp45I	GTSAC	2 cut(s)	77, 1241
TspDTI	ATGAA	4 cut(s)	842, 1201, 1424, 1596
TspGWI	ACGGA	3 cut(s)	96, 573, 973
TspMI	CCCGGG	1 cut(s)	1386
TspRI	CASTG	5 cut(s)	470, 855, 868, 1102, 1534
Van91I	CCANNNNNTGG	3 cut(s)	398, 863, 1213
Vha464I	CTTAAG	1 cut(s)	1004
VpaK11BI	GGWCC	7 cut(s)	38, 446, 581, 801, 1231, 1496, 1510
XagI	CCTNNNNNAGG	1 cut(s)	771
XapI	RAATTY	5 cut(s)	172, 829, 1049, 1411, 1483
XceI	RCATGY	1 cut(s)	421
XcmI	CCANNNNNNNNNTGG	2 cut(s)	794, 1079
XhoI	CTCGAG	1 cut(s)	694
XmaI	CCCGGG	1 cut(s)	1386
XmiI	GTMKAC	1 cut(s)	1025
XmnI	GAANNNNTTC	1 cut(s)	306
XspI	CTAG	2 cut(s)	441, 1055
Zsp2I	ATGCAT	1 cut(s)	423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.