2-oxoisovalerate dehydrogenase subunit alpha 2
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| E1_dh | PF00676 | 137 - 357 | 6.1e-70 | Dehydrogenase E1 component |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1118 |
| Acc36I | ACCTGC | 1 cut(s) | 1118 |
| Acc65I | GGTACC | 1 cut(s) | 1116 |
| AccB1I | GGYRCC | 1 cut(s) | 1116 |
| AccBSI | CCGCTC | 1 cut(s) | 1122 |
| AccI | GTMKAC | 2 cut(s) | 970, 1320 |
| AccII | CGCG | 2 cut(s) | 731, 1026 |
| AciI | CCGC | 8 cut(s) | 106, 131, 179, 389, 731, 779, 1010, 1120 |
| AclWI | GGATC | 1 cut(s) | 1233 |
| AcoI | YGGCCR | 1 cut(s) | 340 |
| AcsI | RAATTY | 2 cut(s) | 602, 960 |
| AcvI | CACGTG | 1 cut(s) | 91 |
| AfaI | GTAC | 5 cut(s) | 557, 901, 1004, 1014, 1118 |
| AfeI | AGCGCT | 1 cut(s) | 1263 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 137 |
| AflIII | ACRYGT | 2 cut(s) | 973, 1305 |
| AgsI | TTSAA | 6 cut(s) | 281, 422, 599, 835, 1095, 1190 |
| AjnI | CCWGG | 2 cut(s) | 247, 565 |
| AluBI | AGCT | 5 cut(s) | 263, 449, 518, 682, 857 |
| AluI | AGCT | 5 cut(s) | 263, 449, 518, 682, 857 |
| Alw26I | GTCTC | 2 cut(s) | 167, 182 |
| AlwI | GGATC | 1 cut(s) | 1233 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 296, 521 |
| Aor51HI | AGCGCT | 1 cut(s) | 1263 |
| AoxI | GGCC | 6 cut(s) | 340, 498, 891, 946, 1049, 1065 |
| ApeKI | GCWGC | 5 cut(s) | 518, 521, 740, 827, 842 |
| ApoI | RAATTY | 2 cut(s) | 602, 960 |
| AseI | ATTAAT | 1 cut(s) | 504 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1307 |
| Asp718I | GGTACC | 1 cut(s) | 1116 |
| AspLEI | GCGC | 1 cut(s) | 1264 |
| AspS9I | GGNCC | 1 cut(s) | 891 |
| AsuC2I | CCSGG | 1 cut(s) | 1268 |
| AsuHPI | GGTGA | 6 cut(s) | 343, 403, 503, 1142, 1375, 1376 |
| AsuII | TTCGAA | 1 cut(s) | 964 |
| AxyI | CCTNAGG | 1 cut(s) | 1343 |
| BalI | TGGCCA | 1 cut(s) | 342 |
| BanI | GGYRCC | 1 cut(s) | 1116 |
| BauI | CACGAG | 1 cut(s) | 805 |
| BbrPI | CACGTG | 1 cut(s) | 91 |
| BbsI | GAAGAC | 1 cut(s) | 1286 |
| BbvI | GCAGC | 5 cut(s) | 505, 508, 727, 814, 854 |
| BccI | CCATC | 8 cut(s) | 751, 791, 882, 902, 923, 974, 1342, 1408 |
| BceAI | ACGGC | 2 cut(s) | 144, 933 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 368, 402 |
| BciT130I | CCWGG | 2 cut(s) | 249, 567 |
| BcnI | CCSGG | 1 cut(s) | 1268 |
| BcoDI | GTCTC | 2 cut(s) | 167, 182 |
| BfaI | CTAG | 4 cut(s) | 81, 198, 1113, 1170 |
| BfmI | CTRYAG | 2 cut(s) | 1125, 1298 |
| BfoI | RGCGCY | 1 cut(s) | 1265 |
| BfuAI | ACCTGC | 1 cut(s) | 1118 |
| BglII | AGATCT | 1 cut(s) | 17 |
| BisI | GCNGC | 5 cut(s) | 519, 522, 741, 828, 843 |
| BlsI | GCNGC | 5 cut(s) | 520, 523, 742, 829, 844 |
| BmcAI | AGTACT | 1 cut(s) | 901 |
| Bme1390I | CCNGG | 3 cut(s) | 249, 567, 1268 |
| BmgT120I | GGNCC | 1 cut(s) | 891 |
| BmiI | GGNNCC | 3 cut(s) | 86, 183, 1118 |
| BmrFI | CCNGG | 3 cut(s) | 249, 567, 1268 |
| BmsI | GCATC | 4 cut(s) | 521, 645, 760, 979 |
| BpiI | GAAGAC | 1 cut(s) | 1286 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 179, 211 |
| Bpu14I | TTCGAA | 1 cut(s) | 964 |
| BpuEI | CTTGAG | 1 cut(s) | 519 |
| BpuMI | CCSGG | 1 cut(s) | 1268 |
| BsaAI | YACGTR | 2 cut(s) | 91, 974 |
| BsaJI | CCNNGG | 2 cut(s) | 67, 174 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 243, 273 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 137 |
| Bse1I | ACTGG | 2 cut(s) | 361, 613 |
| Bse21I | CCTNAGG | 1 cut(s) | 1343 |
| Bse3DI | GCAATG | 1 cut(s) | 708 |
| BseBI | CCWGG | 2 cut(s) | 249, 567 |
| BseDI | CCNNGG | 2 cut(s) | 67, 174 |
| BseGI | GGATG | 3 cut(s) | 775, 893, 985 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 137 |
| BseMI | GCAATG | 1 cut(s) | 708 |
| BseMII | CTCAG | 8 cut(s) | 70, 264, 566, 924, 1220, 1275, 1326, 1357 |
| BseNI | ACTGG | 2 cut(s) | 361, 613 |
| BseRI | GAGGAG | 2 cut(s) | 395, 522 |
| BseXI | GCAGC | 5 cut(s) | 505, 508, 727, 814, 854 |
| Bsh1236I | CGCG | 2 cut(s) | 731, 1026 |
| BshFI | GGCC | 6 cut(s) | 342, 500, 893, 948, 1051, 1067 |
| BshNI | GGYRCC | 1 cut(s) | 1116 |
| BsiSI | CCGG | 2 cut(s) | 877, 1267 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 137 |
| BsmAI | GTCTC | 2 cut(s) | 167, 182 |
| BsmBI | CGTCTC | 1 cut(s) | 167 |
| BsnI | GGCC | 6 cut(s) | 342, 500, 893, 948, 1051, 1067 |
| Bsp119I | TTCGAA | 1 cut(s) | 964 |
| Bsp1407I | TGTACA | 1 cut(s) | 1002 |
| Bsp143I | GATC | 4 cut(s) | 17, 913, 1225, 1374 |
| Bsp19I | CCATGG | 1 cut(s) | 174 |
| Bsp68I | TCGCGA | 1 cut(s) | 1026 |
| BspACI | CCGC | 8 cut(s) | 106, 131, 179, 389, 731, 779, 1010, 1120 |
| BspANI | GGCC | 6 cut(s) | 342, 500, 893, 948, 1051, 1067 |
| BspCNI | CTCAG | 8 cut(s) | 69, 265, 565, 923, 1221, 1276, 1325, 1356 |
| BspFNI | CGCG | 2 cut(s) | 731, 1026 |
| BspLI | GGNNCC | 3 cut(s) | 86, 183, 1118 |
| BspMAI | CTGCAG | 2 cut(s) | 1129, 1302 |
| BspMI | ACCTGC | 1 cut(s) | 1118 |
| BspPI | GGATC | 1 cut(s) | 1233 |
| BspT104I | TTCGAA | 1 cut(s) | 964 |
| BspT107I | GGYRCC | 1 cut(s) | 1116 |
| BsrBI | CCGCTC | 1 cut(s) | 1122 |
| BsrDI | GCAATG | 1 cut(s) | 708 |
| BsrGI | TGTACA | 1 cut(s) | 1002 |
| BsrI | ACTGG | 2 cut(s) | 361, 613 |
| BssECI | CCNNGG | 2 cut(s) | 67, 174 |
| BssMI | GATC | 4 cut(s) | 17, 913, 1225, 1374 |
| BssNAI | GTATAC | 1 cut(s) | 971 |
| BssSI | CACGAG | 1 cut(s) | 805 |
| BssT1I | CCWWGG | 1 cut(s) | 174 |
| Bst1107I | GTATAC | 1 cut(s) | 971 |
| Bst2BI | CACGAG | 1 cut(s) | 805 |
| Bst2UI | CCWGG | 2 cut(s) | 249, 567 |
| Bst4CI | ACNGT | 5 cut(s) | 323, 697, 1007, 1079, 1167 |
| Bst6I | CTCTTC | 2 cut(s) | 423, 489 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 518, 710 |
| BstAUI | TGTACA | 1 cut(s) | 1002 |
| BstBAI | YACGTR | 2 cut(s) | 91, 974 |
| BstBI | TTCGAA | 1 cut(s) | 964 |
| BstC8I | GCNNGC | 2 cut(s) | 650, 1024 |
| BstDEI | CTNAG | 8 cut(s) | 56, 273, 552, 910, 1229, 1284, 1312, 1343 |
| BstDSI | CCRYGG | 1 cut(s) | 174 |
| BstF5I | GGATG | 3 cut(s) | 775, 893, 985 |
| BstFNI | CGCG | 2 cut(s) | 731, 1026 |
| BstH2I | RGCGCY | 1 cut(s) | 1265 |
| BstHHI | GCGC | 1 cut(s) | 1264 |
| BstKTI | GATC | 4 cut(s) | 20, 916, 1228, 1377 |
| BstMAI | GTCTC | 2 cut(s) | 167, 182 |
| BstMBI | GATC | 4 cut(s) | 17, 913, 1225, 1374 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 518, 710, 737, 801 |
| BstNI | CCWGG | 2 cut(s) | 249, 567 |
| BstNSI | RCATGY | 2 cut(s) | 777, 1309 |
| BstSCI | CCNGG | 3 cut(s) | 247, 565, 1266 |
| BstSFI | CTRYAG | 2 cut(s) | 1125, 1298 |
| BstUI | CGCG | 2 cut(s) | 731, 1026 |
| BstV1I | GCAGC | 5 cut(s) | 505, 508, 727, 814, 854 |
| BstV2I | GAAGAC | 1 cut(s) | 1286 |
| BstX2I | RGATCY | 2 cut(s) | 17, 1225 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 620 |
| BstYI | RGATCY | 2 cut(s) | 17, 1225 |
| BstZ17I | GTATAC | 1 cut(s) | 971 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1343 |
| BsuRI | GGCC | 6 cut(s) | 342, 500, 893, 948, 1051, 1067 |
| BtgI | CCRYGG | 1 cut(s) | 174 |
| BtgZI | GCGATG | 1 cut(s) | 810 |
| BtsCI | GGATG | 3 cut(s) | 775, 893, 985 |
| BtsIMutI | CAGTG | 3 cut(s) | 620, 1012, 1163 |
| BtuMI | TCGCGA | 1 cut(s) | 1026 |
| BveI | ACCTGC | 1 cut(s) | 1118 |
| Cac8I | GCNNGC | 2 cut(s) | 650, 1024 |
| CaiI | CAGNNNCTG | 2 cut(s) | 296, 521 |
| CfoI | GCGC | 1 cut(s) | 1264 |
| Cfr13I | GGNCC | 1 cut(s) | 891 |
| Csp6I | GTAC | 5 cut(s) | 556, 900, 1003, 1013, 1117 |
| CviAII | CATG | 7 cut(s) | 122, 175, 774, 824, 1000, 1182, 1306 |
| CviQI | GTAC | 5 cut(s) | 556, 900, 1003, 1013, 1117 |
| DdeI | CTNAG | 8 cut(s) | 56, 273, 552, 910, 1229, 1284, 1312, 1343 |
| DpnI | GATC | 4 cut(s) | 19, 915, 1227, 1376 |
| DpnII | GATC | 4 cut(s) | 17, 913, 1225, 1374 |
| EaeI | YGGCCR | 1 cut(s) | 340 |
| Eam1104I | CTCTTC | 2 cut(s) | 423, 489 |
| EarI | CTCTTC | 2 cut(s) | 423, 489 |
| EciI | GGCGGA | 2 cut(s) | 95, 194 |
| Eco130I | CCWWGG | 1 cut(s) | 174 |
| Eco147I | AGGCCT | 1 cut(s) | 1067 |
| Eco47III | AGCGCT | 1 cut(s) | 1263 |
| Eco72I | CACGTG | 1 cut(s) | 91 |
| Eco81I | CCTNAGG | 1 cut(s) | 1343 |
| EcoRI | GAATTC | 1 cut(s) | 960 |
| EcoRII | CCWGG | 2 cut(s) | 247, 565 |
| EcoT14I | CCWWGG | 1 cut(s) | 174 |
| EcoT22I | ATGCAT | 1 cut(s) | 775 |
| ErhI | CCWWGG | 1 cut(s) | 174 |
| Esp3I | CGTCTC | 1 cut(s) | 167 |
| FaeI | CATG | 7 cut(s) | 125, 178, 777, 827, 1003, 1185, 1309 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 450, 482 |
| FatI | CATG | 7 cut(s) | 121, 174, 773, 823, 999, 1181, 1305 |
| FauI | CCCGC | 1 cut(s) | 138 |
| FblI | GTMKAC | 2 cut(s) | 970, 1320 |
| Fnu4HI | GCNGC | 5 cut(s) | 519, 522, 741, 828, 843 |
| FokI | GGATG | 3 cut(s) | 782, 900, 992 |
| Fsp4HI | GCNGC | 5 cut(s) | 519, 522, 741, 828, 843 |
| FspBI | CTAG | 4 cut(s) | 81, 198, 1113, 1170 |
| GlaI | GCGC | 1 cut(s) | 1263 |
| GluI | GCNGC | 5 cut(s) | 519, 522, 741, 828, 843 |
| HaeII | RGCGCY | 1 cut(s) | 1265 |
| HaeIII | GGCC | 6 cut(s) | 342, 500, 893, 948, 1051, 1067 |
| HapII | CCGG | 2 cut(s) | 877, 1267 |
| HhaI | GCGC | 1 cut(s) | 1264 |
| Hin1II | CATG | 7 cut(s) | 125, 178, 777, 827, 1003, 1185, 1309 |
| Hin6I | GCGC | 1 cut(s) | 1262 |
| HinP1I | GCGC | 1 cut(s) | 1262 |
| HinfI | GANTC | 8 cut(s) | 94, 148, 277, 293, 1106, 1220, 1239, 1294 |
| HpaII | CCGG | 2 cut(s) | 877, 1267 |
| HphI | GGTGA | 6 cut(s) | 343, 403, 503, 1142, 1375, 1376 |
| Hpy166II | GTNNAC | 4 cut(s) | 143, 664, 971, 1321 |
| Hpy188III | TCNNGA | 5 cut(s) | 329, 536, 599, 1025, 1057 |
| Hpy8I | GTNNAC | 4 cut(s) | 143, 664, 971, 1321 |
| HpyAV | CCTTC | 1 cut(s) | 760 |
| HpyCH4III | ACNGT | 5 cut(s) | 323, 697, 1007, 1079, 1167 |
| HpyCH4IV | ACGT | 2 cut(s) | 90, 973 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 518, 710, 737, 801 |
| HpyF3I | CTNAG | 8 cut(s) | 56, 273, 552, 910, 1229, 1284, 1312, 1343 |
| HpySE526I | ACGT | 2 cut(s) | 90, 973 |
| Hsp92II | CATG | 7 cut(s) | 125, 178, 777, 827, 1003, 1185, 1309 |
| HspAI | GCGC | 1 cut(s) | 1262 |
| KpnI | GGTACC | 1 cut(s) | 1120 |
| Kzo9I | GATC | 4 cut(s) | 17, 913, 1225, 1374 |
| LmnI | GCTCC | 4 cut(s) | 84, 181, 862, 1269 |
| Lsp1109I | GCAGC | 5 cut(s) | 505, 508, 727, 814, 854 |
| LweI | GCATC | 4 cut(s) | 521, 645, 760, 979 |
| MaeI | CTAG | 4 cut(s) | 81, 198, 1113, 1170 |
| MaeII | ACGT | 2 cut(s) | 90, 973 |
| MaeIII | GTNAC | 5 cut(s) | 91, 412, 720, 781, 1382 |
| MalI | GATC | 4 cut(s) | 19, 915, 1227, 1376 |
| MbiI | CCGCTC | 1 cut(s) | 1122 |
| MboI | GATC | 4 cut(s) | 17, 913, 1225, 1374 |
| MboII | GAAGA | 5 cut(s) | 12, 406, 410, 506, 1291 |
| MflI | RGATCY | 2 cut(s) | 17, 1225 |
| MlsI | TGGCCA | 1 cut(s) | 342 |
| MluCI | AATT | 7 cut(s) | 153, 281, 423, 602, 685, 960, 1035 |
| MluNI | TGGCCA | 1 cut(s) | 342 |
| MlyI | GAGTC | 1 cut(s) | 88 |
| Mox20I | TGGCCA | 1 cut(s) | 342 |
| Mph1103I | ATGCAT | 1 cut(s) | 775 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1307 |
| MscI | TGGCCA | 1 cut(s) | 342 |
| MseI | TTAA | 3 cut(s) | 504, 752, 1070 |
| Msp20I | TGGCCA | 1 cut(s) | 342 |
| MspA1I | CMGCKG | 1 cut(s) | 518 |
| MspI | CCGG | 2 cut(s) | 877, 1267 |
| MspR9I | CCNGG | 3 cut(s) | 249, 567, 1268 |
| MvaI | CCWGG | 2 cut(s) | 249, 567 |
| MvnI | CGCG | 2 cut(s) | 731, 1026 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 518, 710, 737, 801 |
| NciI | CCSGG | 1 cut(s) | 1268 |
| NcoI | CCATGG | 1 cut(s) | 174 |
| NdeII | GATC | 4 cut(s) | 17, 913, 1225, 1374 |
| NlaIII | CATG | 7 cut(s) | 125, 178, 777, 827, 1003, 1185, 1309 |
| NlaIV | GGNNCC | 3 cut(s) | 86, 183, 1118 |
| NmeAIII | GCCGAG | 1 cut(s) | 76 |
| NmuCI | GTSAC | 3 cut(s) | 91, 781, 1382 |
| NruI | TCGCGA | 1 cut(s) | 1026 |
| NsiI | ATGCAT | 1 cut(s) | 775 |
| NspI | RCATGY | 2 cut(s) | 777, 1309 |
| NspV | TTCGAA | 1 cut(s) | 964 |
| PaqCI | CACCTGC | 1 cut(s) | 1118 |
| PceI | AGGCCT | 1 cut(s) | 1067 |
| PciI | ACATGT | 1 cut(s) | 1305 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 970 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1307 |
| PfeI | GAWTC | 7 cut(s) | 148, 277, 293, 1106, 1220, 1239, 1294 |
| PfoI | TCCNGGA | 1 cut(s) | 247 |
| PkrI | GCNGC | 5 cut(s) | 520, 523, 742, 829, 844 |
| PleI | GAGTC | 1 cut(s) | 88 |
| PmaCI | CACGTG | 1 cut(s) | 91 |
| PmlI | CACGTG | 1 cut(s) | 91 |
| PpsI | GAGTC | 1 cut(s) | 88 |
| Ppu21I | YACGTR | 2 cut(s) | 91, 974 |
| PscI | ACATGT | 1 cut(s) | 1305 |
| PshBI | ATTAAT | 1 cut(s) | 504 |
| Psp6I | CCWGG | 2 cut(s) | 247, 565 |
| PspCI | CACGTG | 1 cut(s) | 91 |
| PspGI | CCWGG | 2 cut(s) | 247, 565 |
| PspN4I | GGNNCC | 3 cut(s) | 86, 183, 1118 |
| PspPI | GGNCC | 1 cut(s) | 891 |
| PstI | CTGCAG | 2 cut(s) | 1129, 1302 |
| PstNI | CAGNNNCTG | 2 cut(s) | 296, 521 |
| PsuI | RGATCY | 2 cut(s) | 17, 1225 |
| PvuII | CAGCTG | 1 cut(s) | 518 |
| RruI | TCGCGA | 1 cut(s) | 1026 |
| RsaI | GTAC | 5 cut(s) | 557, 901, 1004, 1014, 1118 |
| RsaNI | GTAC | 5 cut(s) | 556, 900, 1003, 1013, 1117 |
| SaqAI | TTAA | 3 cut(s) | 504, 752, 1070 |
| SatI | GCNGC | 5 cut(s) | 519, 522, 741, 828, 843 |
| Sau3AI | GATC | 4 cut(s) | 17, 913, 1225, 1374 |
| Sau96I | GGNCC | 1 cut(s) | 891 |
| ScaI | AGTACT | 1 cut(s) | 901 |
| SchI | GAGTC | 1 cut(s) | 88 |
| ScrFI | CCNGG | 3 cut(s) | 249, 567, 1268 |
| SfaNI | GCATC | 4 cut(s) | 521, 645, 760, 979 |
| SfcI | CTRYAG | 2 cut(s) | 1125, 1298 |
| SfuI | TTCGAA | 1 cut(s) | 964 |
| SmlI | CTYRAG | 1 cut(s) | 534 |
| SmoI | CTYRAG | 1 cut(s) | 534 |
| Sse9I | AATT | 7 cut(s) | 153, 281, 423, 602, 685, 960, 1035 |
| SseBI | AGGCCT | 1 cut(s) | 1067 |
| SsiI | CCGC | 8 cut(s) | 106, 131, 179, 389, 731, 779, 1010, 1120 |
| SspI | AATATT | 3 cut(s) | 52, 508, 838 |
| SspMI | CTAG | 4 cut(s) | 81, 198, 1113, 1170 |
| StuI | AGGCCT | 1 cut(s) | 1067 |
| StyD4I | CCNGG | 3 cut(s) | 247, 565, 1266 |
| StyI | CCWWGG | 1 cut(s) | 174 |
| TaaI | ACNGT | 5 cut(s) | 323, 697, 1007, 1079, 1167 |
| TaiI | ACGT | 2 cut(s) | 93, 976 |
| TaqI | TCGA | 3 cut(s) | 38, 136, 964 |
| TasI | AATT | 7 cut(s) | 153, 281, 423, 602, 685, 960, 1035 |
| TatI | WGTACW | 3 cut(s) | 555, 899, 1002 |
| TfiI | GAWTC | 7 cut(s) | 148, 277, 293, 1106, 1220, 1239, 1294 |
| Tru1I | TTAA | 3 cut(s) | 504, 752, 1070 |
| Tru9I | TTAA | 3 cut(s) | 504, 752, 1070 |
| TscAI | CASTG | 3 cut(s) | 620, 1012, 1170 |
| TseFI | GTSAC | 3 cut(s) | 91, 781, 1382 |
| TseI | GCWGC | 5 cut(s) | 518, 521, 740, 827, 842 |
| Tsp45I | GTSAC | 3 cut(s) | 91, 781, 1382 |
| TspDTI | ATGAA | 2 cut(s) | 18, 274 |
| TspGWI | ACGGA | 1 cut(s) | 1232 |
| TspRI | CASTG | 3 cut(s) | 620, 1012, 1170 |
| VspI | ATTAAT | 1 cut(s) | 504 |
| XapI | RAATTY | 2 cut(s) | 602, 960 |
| XceI | RCATGY | 2 cut(s) | 777, 1309 |
| XmiI | GTMKAC | 2 cut(s) | 970, 1320 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1307 |
| XspI | CTAG | 4 cut(s) | 81, 198, 1113, 1170 |
| ZrmI | AGTACT | 1 cut(s) | 901 |
| Zsp2I | ATGCAT | 1 cut(s) | 775 |