Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001226

Physical Location & Seq

Genomic Coordinates Forward (+)

55261488 .. 55265083

Gene Structure 3596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00122280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGATCAACCGTTTCAAGTCCAAGATGGGTTCTTTGGGTTTGATCCATTTCAGCTCTTGGAGTTCATCTTTCACTCGGAAATCTCCGGTTCTGGTTCCTTTTCCGGCTTCATTTGCTCAAAACCTCAGAATCCCGGAGAGAGAGTTTGGAAACTCGCCGCCCCATTTCCGTTTCTGCTCACGTCGTTTTGAATCCGGCAAAGTAGAAAAGCTCTCCGACGACGTTGATGCCAATCAGCTCATGGGCATCTTCGACGAATTAGCTTTCGATATGAGAGTTAAACGTGTTTTGGATTTACCAGAAGGGAAGGTCAAGTTTACTCCTGAAATGAGGTTCATATCTGAGACGACTAAGGAGCGGGAGTCCTGTTATCGGGTCCTTGATGACAATGGGAAGCAAATTTTGCACAGCAACTATGCTGAGGTCAGCCCGGAAGTTGCTGTAAAAATGTACACAGACATGGTGATGCTTCAAACTATGGACATCATTTTCTACGAAGCACAGAGGCAAGGAAGAATTTCATTTTATCTGACTACAGTTGGTGAAGAAGCCATCAATATTGCATCTGCTGCAGCACTCACCTTTAAAGACATTGTCCTTCCTCAGTACAGGGAGCCAGGAGTTTTAATATGGCGTGGTTTCACTGTACAAGAATTTGCAAACCAGTGTTTCAGTAACAAAGCTGATTACGGGAAAGGCAGGCAGATGCCAATCCATTATGGGTCTAACAAGCACAATTACTTCACTGTAGCATCAACCGTGGCTTCACAACTTCCACATGCTGTTGGTGTTGCTTATTCTCTAAAAATGGACAGAAAAGATGCATGTGTGGTCACATATGTTGGTGATGGTGGCACAAGTGAGGGTGACTTTCATGCTGCTCTAAATTTTGCTGCTGTTACGGAGGCTCCAGTTATATTCATTTGTCGGAACAACGGATGGGCTATCAGTACACCTACTTCAGACCAGTTTCGGAGTGATGGTGTTGTTGTCAAAGGTCGGGCTTATGGAATCCGAAGTATCCGAGTAGATGGGAATGATGCACTTGCCATGTATAGTGCAGTTTATGCTGCACGCGAAATGGCAATCAGTGAACAGAGACCAATCTTAATAGAGGCATTAACATATCGAGTTGGGCACCATTCCACATCAGATGATTCGACCAAGTATCGCCCAGTTGATGAGATTGAATTGTGGAAAGTGGAACGAGACCCAGTAACTCGATTTAGAAAATGGATTGAAAGAAATGGTTGGTGGAGTGATGAGGCAGAGATAGAGGCTAGAAACAGTGCGAGAAAGCAGATACCTTTCAGCGATGCCATAGTTAAGGCAGTGCCTTCATGTAGGAATACTAGTTCTATGCTAAAAGTCAAGGGAGATTTCATTAGGGATTTCGTTTATGAAAAGGCTAAACTGAAAATATTACATGCAATCCAAGAAGCTGAAAAAGTAGAGAAGCCACCAGTTGCTGACATGTTCACTGATGTATACGACTGTCTTCCTTCCAATCTTGTTGACCAGGAGAAACGGCTAAGAGAGACAATTAAGAGACACCCCCAGGATTACCCATCTGATGTTCCTGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003826 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006520 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009063 GO:0009081 GO:0009083 GO:0009987 GO:0016054 GO:0016491 GO:0017086 GO:0019752 GO:0031974 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046395 GO:0055114 GO:0070013 GO:0071704 GO:0098798 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00280 ko00640 ko01100 ko01110 ko01130 map00280 map00640 map01100 map01110 map01130

Pfam Domains

Protein Families

E1_dh

Protein Analysis

528

Amino Acids

59.99

Weight (kDa)

7.61

Isoelectric Point (pI)

45.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1_dh	PF00676	153 - 436	1.9e-91	Dehydrogenase E1 component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001226)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21400 AT1G21400 AT1G21400 AT1G21400 AT1G21400 AT1G21400 AT5G09300 AT5G09300 AT5G09300 AT5G09300
fragaria_vesca	FvH4_1g24490 FvH4_1g24490 FvH4_1g24490 FvH4_1g24490 FvH4_1g24490 FvH4_1g24490 FvH4_1g24490 FvH4_1g24490 FvH4_1g24490
malus_domestica	MD01G1005600.v1.1 MD15G1133900.v1.1
prunus_persica	Prupe.4G272100_v2.0.a1
pyrus_communis	pycom01g01240 pycom15g12070
rosa_chinensis	RchiOBHm_Chr2g0121681 RchiOBHm_Chr2g0121691 RchiOBHm_Chr2g0121741 RchiOBHm_Chr2g0121751
rosa_laevigata	RLG00000018629 RLG00000018630
rosa_multiflora	Rmu_co8210604.1_g000001 Rmu_co8500107.1_g000001 Rmu_sc0000315.1_g000007 Rmu_sc0002194.1_g000001 Rmu_sc0002194.1_g000003
rosa_roxburghii	Rroxscaffold_2G00122230 Rroxscaffold_2G00122280 Rroxscaffold_2G00122300 Rroxscaffold_2G00122320
rosa_rugosa	Rorug02G0234000 Rorug02G0234100
rosa_samantha	Rh2AG290900 Rh2AG291100 Rh2AG291300 Rh2AG291400 Rh2BG301700 Rh2BG301900 Rh2CG280500 Rh2CG280700 Rh2DG315500 Rh2DG315600 Rh2DG315800 Rh2DG315900
rosa_wichuraiana	Rw2G023330 Rw2G023350 Rw2G023360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1137
AccBSI	CCGCTC	1 cut(s)	358
AccI	GTMKAC	1 cut(s)	1488
AccII	CGCG	1 cut(s)	1077
AciI	CCGC	2 cut(s)	158, 358
AclWI	GGATC	1 cut(s)	37
AcsI	RAATTY	4 cut(s)	399, 516, 653, 886
AcuI	CTGAAG	1 cut(s)	945
AfaI	GTAC	4 cut(s)	452, 608, 648, 952
AfiI	CCNNNNNNNGG	1 cut(s)	372
AflIII	ACRYGT	2 cut(s)	283, 1473
AgsI	TTSAA	5 cut(s)	16, 191, 473, 1190, 1241
AhlI	ACTAGT	1 cut(s)	1352
AjiI	CACGTC	1 cut(s)	182
AjnI	CCWGG	3 cut(s)	616, 1518, 1557
AloI	GAACNNNNNNTCC	2 cut(s)	1339, 1371
AluBI	AGCT	6 cut(s)	54, 211, 238, 263, 683, 1442
AluI	AGCT	6 cut(s)	54, 211, 238, 263, 683, 1442
Alw26I	GTCTC	5 cut(s)	338, 1093, 1203, 1532, 1543
AlwI	GGATC	1 cut(s)	37
AlwNI	CAGNNNCTG	1 cut(s)	1469
ApeKI	GCWGC	5 cut(s)	569, 572, 878, 893, 1070
ApoI	RAATTY	4 cut(s)	399, 516, 653, 886
Asp700I	GAANNNNTTC	1 cut(s)	517
AspS9I	GGNCC	1 cut(s)	376
AsuC2I	CCSGG	2 cut(s)	134, 431
AsuHPI	GGTGA	5 cut(s)	475, 554, 571, 857, 878
AvaII	GGWCC	1 cut(s)	376
BaeGI	GKGCMC	1 cut(s)	1140
BanI	GGYRCC	1 cut(s)	1137
BarI	GAAGNNNNNNTAC	2 cut(s)	943, 975
BbsI	GAAGAC	1 cut(s)	1490
BbvCI	CCTCAGC	1 cut(s)	420
BbvI	GCAGC	5 cut(s)	556, 584, 865, 880, 1057
BccI	CCATC	7 cut(s)	19, 560, 842, 933, 974, 1025, 1576
BceAI	ACGGC	1 cut(s)	1544
BcgI	CGANNNNNNTGC	2 cut(s)	209, 243
BciT130I	CCWGG	3 cut(s)	618, 1520, 1559
BciVI	GTATCC	1 cut(s)	1031
BclI	TGATCA	1 cut(s)	3
BcnI	CCSGG	2 cut(s)	134, 431
BcoDI	GTCTC	5 cut(s)	338, 1093, 1203, 1532, 1543
BcuI	ACTAGT	1 cut(s)	1352
BfaI	CTAG	2 cut(s)	1281, 1353
BfmI	CTRYAG	3 cut(s)	534, 570, 747
BfuI	GTATCC	1 cut(s)	1031
BisI	GCNGC	6 cut(s)	158, 570, 573, 879, 894, 1071
BlsI	GCNGC	6 cut(s)	159, 571, 574, 880, 895, 1072
Bme1390I	CCNGG	5 cut(s)	134, 431, 618, 1520, 1559
Bme18I	GGWCC	1 cut(s)	376
BmgBI	CACGTC	1 cut(s)	182
BmgT120I	GGNCC	1 cut(s)	376
BmiI	GGNNCC	5 cut(s)	96, 377, 615, 909, 1139
BmrFI	CCNGG	5 cut(s)	134, 431, 618, 1520, 1559
BmrI	ACTGGG	2 cut(s)	1169, 1208
BmsI	GCATC	9 cut(s)	217, 255, 456, 572, 696, 761, 811, 1030, 1306
BmuI	ACTGGG	2 cut(s)	1169, 1208
BpiI	GAAGAC	1 cut(s)	1490
BpmI	CTGGAG	1 cut(s)	894
Bpu10I	CCTNAGC	1 cut(s)	420
BpuMI	CCSGG	2 cut(s)	134, 431
BsaBI	GATNNNNATC	2 cut(s)	231, 710
BsaI	GGTCTC	2 cut(s)	1093, 1203
BsaJI	CCNNGG	2 cut(s)	759, 1557
BsaWI	WCCGGW	1 cut(s)	85
BsaXI	ACNNNNNCTCC	8 cut(s)	128, 158, 347, 377, 892, 922, 967, 997
Bsc4I	CCNNNNNNNGG	1 cut(s)	372
Bse1I	ACTGG	6 cut(s)	664, 911, 967, 1175, 1214, 1463
Bse8I	GATNNNNATC	2 cut(s)	231, 710
BseBI	CCWGG	3 cut(s)	618, 1520, 1559
BseDI	CCNNGG	2 cut(s)	759, 1557
BseGI	GGATG	1 cut(s)	944
BseJI	GATNNNNATC	2 cut(s)	231, 710
BseLI	CCNNNNNNNGG	1 cut(s)	372
BseMII	CTCAG	4 cut(s)	139, 333, 411, 617
BseNI	ACTGG	6 cut(s)	664, 911, 967, 1175, 1214, 1463
BseSI	GKGCMC	1 cut(s)	1140
BseXI	GCAGC	5 cut(s)	556, 584, 865, 880, 1057
BsgI	GTGCAG	2 cut(s)	1056, 1080
Bsh1236I	CGCG	1 cut(s)	1077
BshNI	GGYRCC	1 cut(s)	1137
BsiSI	CCGG	5 cut(s)	86, 104, 134, 195, 431
BslI	CCNNNNNNNGG	1 cut(s)	372
BsmAI	GTCTC	5 cut(s)	338, 1093, 1203, 1532, 1543
BsmBI	CGTCTC	1 cut(s)	338
Bso31I	GGTCTC	2 cut(s)	1093, 1203
Bsp1286I	GDGCHC	1 cut(s)	1140
Bsp1407I	TGTACA	2 cut(s)	450, 646
Bsp143I	GATC	2 cut(s)	3, 42
BspACI	CCGC	2 cut(s)	158, 358
BspCNI	CTCAG	4 cut(s)	138, 334, 412, 616
BspFNI	CGCG	1 cut(s)	1077
BspLI	GGNNCC	5 cut(s)	96, 377, 615, 909, 1139
BspMAI	CTGCAG	1 cut(s)	574
BspPI	GGATC	1 cut(s)	37
BspT107I	GGYRCC	1 cut(s)	1137
BspTNI	GGTCTC	2 cut(s)	1093, 1203
BsrBI	CCGCTC	1 cut(s)	358
BsrGI	TGTACA	2 cut(s)	450, 646
BsrI	ACTGG	6 cut(s)	664, 911, 967, 1175, 1214, 1463
BssECI	CCNNGG	2 cut(s)	759, 1557
BssMI	GATC	2 cut(s)	3, 42
BssNAI	GTATAC	1 cut(s)	1489
Bst1107I	GTATAC	1 cut(s)	1489
Bst2UI	CCWGG	3 cut(s)	618, 1520, 1559
Bst4CI	ACNGT	7 cut(s)	11, 538, 646, 748, 760, 1289, 1496
BstAPI	GCANNNNNTGC	3 cut(s)	403, 569, 1067
BstAUI	TGTACA	2 cut(s)	450, 646
BstC8I	GCNNGC	2 cut(s)	701, 1075
BstDEI	CTNAG	6 cut(s)	125, 342, 351, 420, 603, 1532
BstDSI	CCRYGG	1 cut(s)	759
BstF5I	GGATG	1 cut(s)	944
BstFNI	CGCG	1 cut(s)	1077
BstKTI	GATC	2 cut(s)	6, 45
BstMAI	GTCTC	5 cut(s)	338, 1093, 1203, 1532, 1543
BstMBI	GATC	2 cut(s)	3, 42
BstMWI	GCNNNNNNNGC	4 cut(s)	113, 403, 569, 1067
BstNI	CCWGG	3 cut(s)	618, 1520, 1559
BstNSI	RCATGY	4 cut(s)	782, 828, 1430, 1477
BstSCI	CCNGG	5 cut(s)	132, 429, 616, 1518, 1557
BstSFI	CTRYAG	3 cut(s)	534, 570, 747
BstSLI	GKGCMC	1 cut(s)	1140
BstUI	CGCG	1 cut(s)	1077
BstV1I	GCAGC	5 cut(s)	556, 584, 865, 880, 1057
BstV2I	GAAGAC	1 cut(s)	1490
BstZ17I	GTATAC	1 cut(s)	1489
BsuI	GTATCC	1 cut(s)	1031
BtgI	CCRYGG	1 cut(s)	759
BtgZI	GCGATG	1 cut(s)	1329
BtrI	CACGTC	1 cut(s)	182
BtsCI	GGATG	1 cut(s)	944
BtsI	GCAGTG	1 cut(s)	1338
BtsIMutI	CAGTG	7 cut(s)	642, 671, 744, 1096, 1294, 1338, 1479
Cac8I	GCNNGC	2 cut(s)	701, 1075
CaiI	CAGNNNCTG	1 cut(s)	1469
Cfr13I	GGNCC	1 cut(s)	376
Csp6I	GTAC	4 cut(s)	451, 607, 647, 951
CviAII	CATG	9 cut(s)	241, 460, 779, 825, 875, 1051, 1341, 1427, 1474
CviQI	GTAC	4 cut(s)	451, 607, 647, 951
DdeI	CTNAG	6 cut(s)	125, 342, 351, 420, 603, 1532
DpnI	GATC	2 cut(s)	5, 44
DpnII	GATC	2 cut(s)	3, 42
DraI	TTTAAA	1 cut(s)	586
Eco31I	GGTCTC	2 cut(s)	1093, 1203
Eco47I	GGWCC	1 cut(s)	376
Eco57I	CTGAAG	1 cut(s)	945
EcoO109I	RGGNCCY	1 cut(s)	376
EcoRII	CCWGG	3 cut(s)	616, 1518, 1557
EcoT22I	ATGCAT	1 cut(s)	826
Esp3I	CGTCTC	1 cut(s)	338
FaeI	CATG	9 cut(s)	244, 463, 782, 828, 878, 1054, 1344, 1430, 1477
FatI	CATG	9 cut(s)	240, 459, 778, 824, 874, 1050, 1340, 1426, 1473
FauI	CCCGC	1 cut(s)	351
FauNDI	CATATG	1 cut(s)	838
FbaI	TGATCA	1 cut(s)	3
FblI	GTMKAC	1 cut(s)	1488
Fnu4HI	GCNGC	6 cut(s)	158, 570, 573, 879, 894, 1071
FokI	GGATG	1 cut(s)	951
Fsp4HI	GCNGC	6 cut(s)	158, 570, 573, 879, 894, 1071
FspBI	CTAG	2 cut(s)	1281, 1353
GluI	GCNGC	6 cut(s)	158, 570, 573, 879, 894, 1071
GsuI	CTGGAG	1 cut(s)	894
HapII	CCGG	5 cut(s)	86, 104, 134, 195, 431
Hin1II	CATG	9 cut(s)	244, 463, 782, 828, 878, 1054, 1344, 1430, 1477
HincII	GTYRAC	1 cut(s)	1516
HindII	GTYRAC	1 cut(s)	1516
HinfI	GANTC	5 cut(s)	129, 191, 362, 1011, 1157
HpaII	CCGG	5 cut(s)	86, 104, 134, 195, 431
HphI	GGTGA	5 cut(s)	475, 554, 571, 857, 878
Hpy166II	GTNNAC	7 cut(s)	318, 453, 953, 1094, 1479, 1489, 1516
Hpy188III	TCNNGA	1 cut(s)	323
Hpy8I	GTNNAC	7 cut(s)	318, 453, 953, 1094, 1479, 1489, 1516
Hpy99I	CGWCG	4 cut(s)	186, 221, 224, 257
HpyAV	CCTTC	5 cut(s)	296, 301, 608, 1347, 1512
HpyCH4III	ACNGT	7 cut(s)	11, 538, 646, 748, 760, 1289, 1496
HpyCH4IV	ACGT	3 cut(s)	181, 222, 283
HpyCH4V	TGCA	9 cut(s)	406, 563, 572, 659, 824, 1043, 1061, 1073, 1430
HpyF10VI	GCNNNNNNNGC	4 cut(s)	113, 403, 569, 1067
HpyF3I	CTNAG	6 cut(s)	125, 342, 351, 420, 603, 1532
HpySE526I	ACGT	3 cut(s)	181, 222, 283
Hsp92II	CATG	9 cut(s)	244, 463, 782, 828, 878, 1054, 1344, 1430, 1477
Ksp22I	TGATCA	1 cut(s)	3
Kzo9I	GATC	2 cut(s)	3, 42
LmnI	GCTCC	3 cut(s)	355, 613, 913
Lsp1109I	GCAGC	5 cut(s)	556, 584, 865, 880, 1057
LweI	GCATC	9 cut(s)	217, 255, 456, 572, 696, 761, 811, 1030, 1306
MaeI	CTAG	2 cut(s)	1281, 1353
MaeII	ACGT	3 cut(s)	181, 222, 283
MaeIII	GTNAC	5 cut(s)	674, 832, 866, 898, 1216
MalI	GATC	2 cut(s)	5, 44
MbiI	CCGCTC	1 cut(s)	358
MboI	GATC	2 cut(s)	3, 42
MboII	GAAGA	4 cut(s)	241, 525, 557, 1490
MhlI	GDGCHC	1 cut(s)	1140
MluCI	AATT	8 cut(s)	257, 399, 516, 653, 736, 886, 1190, 1542
MlyI	GAGTC	1 cut(s)	371
MmeI	TCCRAC	2 cut(s)	240, 908
Mph1103I	ATGCAT	1 cut(s)	826
MroXI	GAANNNNTTC	1 cut(s)	517
MseI	TTAA	7 cut(s)	279, 585, 626, 1109, 1121, 1326, 1545
MslI	CAYNNNNRTG	2 cut(s)	458, 464
MspI	CCGG	5 cut(s)	86, 104, 134, 195, 431
MspR9I	CCNGG	5 cut(s)	134, 431, 618, 1520, 1559
MvaI	CCWGG	3 cut(s)	618, 1520, 1559
MvnI	CGCG	1 cut(s)	1077
MwoI	GCNNNNNNNGC	4 cut(s)	113, 403, 569, 1067
NciI	CCSGG	2 cut(s)	134, 431
NdeI	CATATG	1 cut(s)	838
NdeII	GATC	2 cut(s)	3, 42
NlaIII	CATG	9 cut(s)	244, 463, 782, 828, 878, 1054, 1344, 1430, 1477
NlaIV	GGNNCC	5 cut(s)	96, 377, 615, 909, 1139
NmuCI	GTSAC	2 cut(s)	832, 866
NsiI	ATGCAT	1 cut(s)	826
NspI	RCATGY	4 cut(s)	782, 828, 1430, 1477
PciI	ACATGT	1 cut(s)	1473
PdmI	GAANNNNTTC	1 cut(s)	517
PfeI	GAWTC	4 cut(s)	129, 191, 1011, 1157
PflFI	GACNNNGTC	1 cut(s)	593
PfoI	TCCNGGA	1 cut(s)	132
PkrI	GCNGC	6 cut(s)	159, 571, 574, 880, 895, 1072
PleI	GAGTC	1 cut(s)	370
PpsI	GAGTC	1 cut(s)	370
PpuMI	RGGWCCY	1 cut(s)	376
PscI	ACATGT	1 cut(s)	1473
Psp5II	RGGWCCY	1 cut(s)	376
Psp6I	CCWGG	3 cut(s)	616, 1518, 1557
PspGI	CCWGG	3 cut(s)	616, 1518, 1557
PspN4I	GGNNCC	5 cut(s)	96, 377, 615, 909, 1139
PspPI	GGNCC	1 cut(s)	376
PspPPI	RGGWCCY	1 cut(s)	376
PstI	CTGCAG	1 cut(s)	574
PstNI	CAGNNNCTG	1 cut(s)	1469
PsyI	GACNNNGTC	1 cut(s)	593
RsaI	GTAC	4 cut(s)	452, 608, 648, 952
RsaNI	GTAC	4 cut(s)	451, 607, 647, 951
RseI	CAYNNNNRTG	2 cut(s)	458, 464
SaqAI	TTAA	7 cut(s)	279, 585, 626, 1109, 1121, 1326, 1545
SatI	GCNGC	6 cut(s)	158, 570, 573, 879, 894, 1071
Sau3AI	GATC	2 cut(s)	3, 42
Sau96I	GGNCC	1 cut(s)	376
SchI	GAGTC	1 cut(s)	371
ScrFI	CCNGG	5 cut(s)	134, 431, 618, 1520, 1559
SduI	GDGCHC	1 cut(s)	1140
SfaNI	GCATC	9 cut(s)	217, 255, 456, 572, 696, 761, 811, 1030, 1306
SfcI	CTRYAG	3 cut(s)	534, 570, 747
SinI	GGWCC	1 cut(s)	376
SmiMI	CAYNNNNRTG	2 cut(s)	458, 464
SpeI	ACTAGT	1 cut(s)	1352
Sse9I	AATT	8 cut(s)	257, 399, 516, 653, 736, 886, 1190, 1542
SsiI	CCGC	2 cut(s)	158, 358
SspI	AATATT	2 cut(s)	559, 1422
SspMI	CTAG	2 cut(s)	1281, 1353
StyD4I	CCNGG	5 cut(s)	132, 429, 616, 1518, 1557
TaaI	ACNGT	7 cut(s)	11, 538, 646, 748, 760, 1289, 1496
TaiI	ACGT	3 cut(s)	184, 225, 286
TaqI	TCGA	5 cut(s)	252, 267, 1129, 1160, 1222
TasI	AATT	8 cut(s)	257, 399, 516, 653, 736, 886, 1190, 1542
TatI	WGTACW	4 cut(s)	450, 606, 646, 950
TauI	GCSGC	1 cut(s)	160
TfiI	GAWTC	4 cut(s)	129, 191, 1011, 1157
Tru1I	TTAA	7 cut(s)	279, 585, 626, 1109, 1121, 1326, 1545
Tru9I	TTAA	7 cut(s)	279, 585, 626, 1109, 1121, 1326, 1545
TscAI	CASTG	7 cut(s)	649, 671, 751, 1096, 1294, 1338, 1486
TseFI	GTSAC	2 cut(s)	832, 866
TseI	GCWGC	5 cut(s)	569, 572, 878, 893, 1070
Tsp45I	GTSAC	2 cut(s)	832, 866
TspDTI	ATGAA	9 cut(s)	54, 99, 325, 510, 863, 910, 1329, 1372, 1416
TspGWI	ACGGA	3 cut(s)	158, 917, 951
TspRI	CASTG	7 cut(s)	649, 671, 751, 1096, 1294, 1338, 1486
Tth111I	GACNNNGTC	1 cut(s)	593
VpaK11BI	GGWCC	1 cut(s)	376
XapI	RAATTY	4 cut(s)	399, 516, 653, 886
XceI	RCATGY	4 cut(s)	782, 828, 1430, 1477
XcmI	CCANNNNNNNNNTGG	1 cut(s)	238
XmiI	GTMKAC	1 cut(s)	1488
XmnI	GAANNNNTTC	1 cut(s)	517
XspI	CTAG	2 cut(s)	1281, 1353
Zsp2I	ATGCAT	1 cut(s)	826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.