Rh2BG301900

2-oxoisovalerate dehydrogenase subunit alpha

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
34931379 .. 34941262
9884 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG301900.1

Sequence Viewer

Length: 1458 bp
ATGATGGCTCTCTGGGTCAGGAAATCACGAGACTTTATGATCAACCGTTTCAAGTCCAAGAAAGGTTCTTTGGGTTTGATCCATTTCAGCTCTTGCGGTTCATCTTTAACTCGCAAATCTCCGGTCCGGGTTCCTTTTCCGGCTTCATTTGCTCAAAACCACAGAATCCCGGAGGGAGACTTGGGAAACTCGCCCGCCCATTTCCGTTTCTGCTCTCGTCGTTTTGAATCCGGTAAAGCAGAAACGCTCTACGACGAGGGTGATGCCAATCAGGTTTTGGATTTACCAGATGGGAAGGTCAAGTTTACTCCTGAAATGAGGTTCATATCTGAGTCGACTAAGGAGCGCGAGTCCTGTTATCGGGTCCTTGATGACAATGGGAAGAAAATTATGTCCAGCAACTATGTTGAGGTCAGCCGGGAAATTTCTGTAAAAATGTACACAGACATGGTGATGCTTCAAACTATGGACACCATTTTCTACGAAGCACAGAGGCAAGGAAGGATTTCCTTTTATCTGACTACAGTTGGTGAAGAAGCCATCAATATTGCATCTGCTGCAGCACTCACCTTTGATGACATTGTCCTTCCTCAGTATAGGGAGCCAGGAGTTTTAATATGGCGTGGTTTCACTGCACAAGAATTTGCAAACCAGTGTTTCAGTAACAAAGCTGATTATGGGAAAGGCAGGCAGATGCCAATCCATTATGGGTCTAACAAGCACAATTACATCACTGTATCATCACCCATAGCTACACAACTTCCACAGGCTGTTGGTGTTGCTTATTCTCTAAAAATGGACAGAAAAGATGCATGTGTGGTCACATATATTGGTGAAGGTGGCACAAGTGAGGGTGATTTCCATGCTGCTCTAAATTTTGCGGCTGTTACGGAGGCTCCAGTCATATTCATTTGTCGGAACAATGGATGGGCTATCAGTACACCTACTTCAGACCAGTTTCGGAGTGATGGCGTTGTTGTCAAAGGTCGGGCTTATGGAATCCGAAGTATCCGAGTAGATGGGAATGATGCACTTGCCATGTATAGTGCAGTTTATGCTGCACGCGAAATGGCAATCAGTGAACAGAGACCAATCTTAATAGAGGCATTAACATATCGAGTTGGGCACCATTCCACATCAGATGATTCGACCAAGTATCGCCCAGTTGATGAGATTGAATTGTGGAAAGTGGAACGAGACCCAGTAACTCGATTTAGAAAATGGATTGAAAGAAATGGTTGGTGGAGTGGTGAGGCAGAGATAGAGGCTAGAAACAGTGCGAGAAAGCAGATATTACATGCAATCCAAGAAGCTGAAAAAGTAGAGAAGCCACCAGTTGCTGACATGTTCACTGATGTATACGACTGTCTTCCTTCCAATCTTGTTGAGCAGGAGAAACGGCTAAGAGAGACAATTAAGAGACACCCCCAGGATTACCCATCTGATGTTCCTGTGTAA

Protein Analysis

485

Amino Acids

54.92

Weight (kDa)

7.14

Isoelectric Point (pI)

48.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
E1_dh PF00676 149 - 445 4e-94 Dehydrogenase E1 component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1125
AccI GTMKAC 2 cut(s) 335, 1359
AccII CGCG 2 cut(s) 348, 1065
AciI CCGC 3 cut(s) 96, 195, 881
AclWI GGATC 1 cut(s) 73
AcsI RAATTY 3 cut(s) 423, 641, 874
AcuI CTGAAG 1 cut(s) 933
AfaI GTAC 2 cut(s) 440, 940
AfiI CCNNNNNNNGG 1 cut(s) 360
AflIII ACRYGT 1 cut(s) 1344
AgsI TTSAA 5 cut(s) 52, 227, 461, 1178, 1229
AjnI CCWGG 2 cut(s) 604, 1428
AjuI GAANNNNNNNTTGG 2 cut(s) 53, 85
AluBI AGCT 4 cut(s) 90, 671, 752, 1313
AluI AGCT 4 cut(s) 90, 671, 752, 1313
Alw26I GTCTC 6 cut(s) 24, 171, 1081, 1191, 1403, 1414
AlwI GGATC 1 cut(s) 73
AlwNI CAGNNNCTG 1 cut(s) 1340
ApeKI GCWGC 4 cut(s) 557, 560, 866, 1058
ApoI RAATTY 3 cut(s) 423, 641, 874
ArsI GACNNNNNNTTYG 2 cut(s) 108, 140
Asp700I GAANNNNTTC 1 cut(s) 505
AspLEI GCGC 1 cut(s) 348
AspS9I GGNCC 2 cut(s) 124, 364
AsuC2I CCSGG 3 cut(s) 128, 170, 419
AsuHPI GGTGA 8 cut(s) 272, 463, 542, 559, 735, 845, 866, 1262
AvaII GGWCC 2 cut(s) 124, 364
BaeGI GKGCMC 1 cut(s) 1128
BanI GGYRCC 1 cut(s) 1125
BarI GAAGNNNNNNTAC 2 cut(s) 931, 963
BauI CACGAG 1 cut(s) 27
BbsI GAAGAC 1 cut(s) 1361
BbvI GCAGC 4 cut(s) 544, 572, 853, 1045
BccI CCATC 6 cut(s) 284, 548, 921, 962, 1013, 1447
BceAI ACGGC 1 cut(s) 1415
BcgI CGANNNNNNTGC 2 cut(s) 245, 279
BciT130I CCWGG 2 cut(s) 606, 1430
BciVI GTATCC 1 cut(s) 1019
BclI TGATCA 1 cut(s) 39
BcnI CCSGG 3 cut(s) 128, 170, 419
BcoDI GTCTC 6 cut(s) 24, 171, 1081, 1191, 1403, 1414
BfaI CTAG 1 cut(s) 1269
BfmI CTRYAG 2 cut(s) 522, 558
BfuI GTATCC 1 cut(s) 1019
BisI GCNGC 5 cut(s) 558, 561, 867, 882, 1059
BlsI GCNGC 5 cut(s) 559, 562, 868, 883, 1060
Bme1390I CCNGG 5 cut(s) 128, 170, 419, 606, 1430
Bme18I GGWCC 2 cut(s) 124, 364
BmgT120I GGNCC 2 cut(s) 124, 364
BmiI GGNNCC 5 cut(s) 132, 365, 603, 897, 1127
BmrFI CCNGG 5 cut(s) 128, 170, 419, 606, 1430
BmrI ACTGGG 2 cut(s) 1157, 1196
BmsI GCATC 6 cut(s) 253, 444, 560, 684, 799, 1018
BmuI ACTGGG 2 cut(s) 1157, 1196
BpiI GAAGAC 1 cut(s) 1361
BpmI CTGGAG 1 cut(s) 882
BpuMI CCSGG 3 cut(s) 128, 170, 419
BsaBI GATNNNNATC 2 cut(s) 267, 698
BsaI GGTCTC 2 cut(s) 1081, 1191
BsaJI CCNNGG 1 cut(s) 1428
BsaWI WCCGGW 2 cut(s) 121, 230
BsaXI ACNNNNNCTCC 4 cut(s) 335, 365, 880, 910
Bsc4I CCNNNNNNNGG 1 cut(s) 360
Bse1I ACTGG 6 cut(s) 652, 899, 955, 1163, 1202, 1334
Bse8I GATNNNNATC 2 cut(s) 267, 698
BseBI CCWGG 2 cut(s) 606, 1430
BseDI CCNNGG 1 cut(s) 1428
BseGI GGATG 1 cut(s) 932
BseJI GATNNNNATC 2 cut(s) 267, 698
BseLI CCNNNNNNNGG 1 cut(s) 360
BseMII CTCAG 2 cut(s) 321, 605
BseNI ACTGG 6 cut(s) 652, 899, 955, 1163, 1202, 1334
BseSI GKGCMC 1 cut(s) 1128
BseXI GCAGC 4 cut(s) 544, 572, 853, 1045
BsgI GTGCAG 3 cut(s) 618, 1044, 1068
Bsh1236I CGCG 2 cut(s) 348, 1065
BshNI GGYRCC 1 cut(s) 1125
BsiSI CCGG 6 cut(s) 122, 127, 140, 170, 231, 418
BslI CCNNNNNNNGG 1 cut(s) 360
BsmAI GTCTC 6 cut(s) 24, 171, 1081, 1191, 1403, 1414
Bso31I GGTCTC 2 cut(s) 1081, 1191
Bsp1286I GDGCHC 1 cut(s) 1128
Bsp1407I TGTACA 1 cut(s) 438
Bsp143I GATC 2 cut(s) 39, 78
BspACI CCGC 3 cut(s) 96, 195, 881
BspCNI CTCAG 2 cut(s) 322, 604
BspFNI CGCG 2 cut(s) 348, 1065
BspLI GGNNCC 5 cut(s) 132, 365, 603, 897, 1127
BspMAI CTGCAG 1 cut(s) 562
BspPI GGATC 1 cut(s) 73
BspT107I GGYRCC 1 cut(s) 1125
BspTNI GGTCTC 2 cut(s) 1081, 1191
BsrGI TGTACA 1 cut(s) 438
BsrI ACTGG 6 cut(s) 652, 899, 955, 1163, 1202, 1334
BssECI CCNNGG 1 cut(s) 1428
BssMI GATC 2 cut(s) 39, 78
BssNAI GTATAC 1 cut(s) 1360
BssSI CACGAG 1 cut(s) 27
Bst1107I GTATAC 1 cut(s) 1360
Bst2BI CACGAG 1 cut(s) 27
Bst2UI CCWGG 2 cut(s) 606, 1430
Bst4CI ACNGT 5 cut(s) 47, 526, 736, 1277, 1367
BstAPI GCANNNNNTGC 2 cut(s) 557, 1055
BstAUI TGTACA 1 cut(s) 438
BstC8I GCNNGC 3 cut(s) 195, 689, 1063
BstDEI CTNAG 4 cut(s) 330, 339, 591, 1403
BstF5I GGATG 1 cut(s) 932
BstFNI CGCG 2 cut(s) 348, 1065
BstHHI GCGC 1 cut(s) 348
BstKTI GATC 2 cut(s) 42, 81
BstMAI GTCTC 6 cut(s) 24, 171, 1081, 1191, 1403, 1414
BstMBI GATC 2 cut(s) 39, 78
BstMWI GCNNNNNNNGC 3 cut(s) 149, 557, 1055
BstNI CCWGG 2 cut(s) 606, 1430
BstNSI RCATGY 3 cut(s) 816, 1301, 1348
BstSCI CCNGG 5 cut(s) 126, 168, 417, 604, 1428
BstSFI CTRYAG 2 cut(s) 522, 558
BstSLI GKGCMC 1 cut(s) 1128
BstUI CGCG 2 cut(s) 348, 1065
BstV1I GCAGC 4 cut(s) 544, 572, 853, 1045
BstV2I GAAGAC 1 cut(s) 1361
BstZ17I GTATAC 1 cut(s) 1360
BsuI GTATCC 1 cut(s) 1019
BtsCI GGATG 1 cut(s) 932
BtsI GCAGTG 1 cut(s) 630
BtsIMutI CAGTG 6 cut(s) 630, 659, 732, 1084, 1282, 1350
Cac8I GCNNGC 3 cut(s) 195, 689, 1063
CaiI CAGNNNCTG 1 cut(s) 1340
CfoI GCGC 1 cut(s) 348
Cfr13I GGNCC 2 cut(s) 124, 364
CpoI CGGWCCG 1 cut(s) 124
Csp6I GTAC 2 cut(s) 439, 939
CspI CGGWCCG 1 cut(s) 124
CviAII CATG 6 cut(s) 448, 813, 863, 1039, 1298, 1345
CviQI GTAC 2 cut(s) 439, 939
DdeI CTNAG 4 cut(s) 330, 339, 591, 1403
DpnI GATC 2 cut(s) 41, 80
DpnII GATC 2 cut(s) 39, 78
Eco31I GGTCTC 2 cut(s) 1081, 1191
Eco47I GGWCC 2 cut(s) 124, 364
Eco57I CTGAAG 1 cut(s) 933
EcoO109I RGGNCCY 1 cut(s) 364
EcoRII CCWGG 2 cut(s) 604, 1428
EcoT22I ATGCAT 1 cut(s) 814
FaeI CATG 6 cut(s) 451, 816, 866, 1042, 1301, 1348
FatI CATG 6 cut(s) 447, 812, 862, 1038, 1297, 1344
FauI CCCGC 1 cut(s) 202
FbaI TGATCA 1 cut(s) 39
FblI GTMKAC 2 cut(s) 335, 1359
Fnu4HI GCNGC 5 cut(s) 558, 561, 867, 882, 1059
FokI GGATG 1 cut(s) 939
Fsp4HI GCNGC 5 cut(s) 558, 561, 867, 882, 1059
FspBI CTAG 1 cut(s) 1269
GlaI GCGC 1 cut(s) 347
GluI GCNGC 5 cut(s) 558, 561, 867, 882, 1059
GsuI CTGGAG 1 cut(s) 882
HapII CCGG 6 cut(s) 122, 127, 140, 170, 231, 418
HhaI GCGC 1 cut(s) 348
Hin1II CATG 6 cut(s) 451, 816, 866, 1042, 1301, 1348
Hin6I GCGC 1 cut(s) 346
HinP1I GCGC 1 cut(s) 346
HincII GTYRAC 1 cut(s) 336
HindII GTYRAC 1 cut(s) 336
HinfI GANTC 6 cut(s) 165, 227, 332, 350, 999, 1145
HpaII CCGG 6 cut(s) 122, 127, 140, 170, 231, 418
HphI GGTGA 8 cut(s) 272, 463, 542, 559, 735, 845, 866, 1262
Hpy166II GTNNAC 7 cut(s) 306, 336, 441, 941, 1082, 1350, 1360
Hpy188I TCNGA 9 cut(s) 331, 519, 918, 952, 963, 1004, 1013, 1141, 1444
Hpy188III TCNNGA 3 cut(s) 19, 27, 311
Hpy8I GTNNAC 7 cut(s) 306, 336, 441, 941, 1082, 1350, 1360
Hpy99I CGWCG 2 cut(s) 222, 257
HpyAV CCTTC 5 cut(s) 289, 495, 596, 830, 1383
HpyCH4III ACNGT 5 cut(s) 47, 526, 736, 1277, 1367
HpyCH4V TGCA 9 cut(s) 551, 560, 635, 647, 812, 1031, 1049, 1061, 1301
HpyF10VI GCNNNNNNNGC 3 cut(s) 149, 557, 1055
HpyF3I CTNAG 4 cut(s) 330, 339, 591, 1403
Hsp92II CATG 6 cut(s) 451, 816, 866, 1042, 1301, 1348
HspAI GCGC 1 cut(s) 346
Ksp22I TGATCA 1 cut(s) 39
Kzo9I GATC 2 cut(s) 39, 78
LmnI GCTCC 3 cut(s) 343, 601, 901
Lsp1109I GCAGC 4 cut(s) 544, 572, 853, 1045
LweI GCATC 6 cut(s) 253, 444, 560, 684, 799, 1018
MaeI CTAG 1 cut(s) 1269
MaeIII GTNAC 4 cut(s) 662, 820, 886, 1204
MalI GATC 2 cut(s) 41, 80
MboI GATC 2 cut(s) 39, 78
MboII GAAGA 3 cut(s) 394, 545, 1361
MhlI GDGCHC 1 cut(s) 1128
MluCI AATT 7 cut(s) 387, 423, 641, 724, 874, 1178, 1413
MlyI GAGTC 2 cut(s) 341, 359
MmeI TCCRAC 1 cut(s) 896
Mph1103I ATGCAT 1 cut(s) 814
MroXI GAANNNNTTC 1 cut(s) 505
MseI TTAA 5 cut(s) 107, 614, 1097, 1109, 1416
MslI CAYNNNNRTG 2 cut(s) 446, 452
MspI CCGG 6 cut(s) 122, 127, 140, 170, 231, 418
MspR9I CCNGG 5 cut(s) 128, 170, 419, 606, 1430
MvaI CCWGG 2 cut(s) 606, 1430
MvnI CGCG 2 cut(s) 348, 1065
MwoI GCNNNNNNNGC 3 cut(s) 149, 557, 1055
NciI CCSGG 3 cut(s) 128, 170, 419
NdeII GATC 2 cut(s) 39, 78
NlaIII CATG 6 cut(s) 451, 816, 866, 1042, 1301, 1348
NlaIV GGNNCC 5 cut(s) 132, 365, 603, 897, 1127
NmuCI GTSAC 1 cut(s) 820
NsiI ATGCAT 1 cut(s) 814
NspI RCATGY 3 cut(s) 816, 1301, 1348
PciI ACATGT 1 cut(s) 1344
PdmI GAANNNNTTC 1 cut(s) 505
PfeI GAWTC 4 cut(s) 165, 227, 999, 1145
PflFI GACNNNGTC 1 cut(s) 581
PfoI TCCNGGA 1 cut(s) 168
PkrI GCNGC 5 cut(s) 559, 562, 868, 883, 1060
PleI GAGTC 2 cut(s) 340, 358
PpsI GAGTC 2 cut(s) 340, 358
PpuMI RGGWCCY 1 cut(s) 364
PscI ACATGT 1 cut(s) 1344
Psp5II RGGWCCY 1 cut(s) 364
Psp6I CCWGG 2 cut(s) 604, 1428
PspGI CCWGG 2 cut(s) 604, 1428
PspN4I GGNNCC 5 cut(s) 132, 365, 603, 897, 1127
PspPI GGNCC 2 cut(s) 124, 364
PspPPI RGGWCCY 1 cut(s) 364
PstI CTGCAG 1 cut(s) 562
PstNI CAGNNNCTG 1 cut(s) 1340
PsyI GACNNNGTC 1 cut(s) 581
RsaI GTAC 2 cut(s) 440, 940
RsaNI GTAC 2 cut(s) 439, 939
RseI CAYNNNNRTG 2 cut(s) 446, 452
Rsr2I CGGWCCG 1 cut(s) 124
RsrII CGGWCCG 1 cut(s) 124
SalI GTCGAC 1 cut(s) 334
SaqAI TTAA 5 cut(s) 107, 614, 1097, 1109, 1416
SatI GCNGC 5 cut(s) 558, 561, 867, 882, 1059
Sau3AI GATC 2 cut(s) 39, 78
Sau96I GGNCC 2 cut(s) 124, 364
SchI GAGTC 2 cut(s) 341, 359
ScrFI CCNGG 5 cut(s) 128, 170, 419, 606, 1430
SduI GDGCHC 1 cut(s) 1128
SfaNI GCATC 6 cut(s) 253, 444, 560, 684, 799, 1018
SfcI CTRYAG 2 cut(s) 522, 558
SinI GGWCC 2 cut(s) 124, 364
SmiMI CAYNNNNRTG 2 cut(s) 446, 452
Sse9I AATT 7 cut(s) 387, 423, 641, 724, 874, 1178, 1413
SsiI CCGC 3 cut(s) 96, 195, 881
SspI AATATT 1 cut(s) 547
SspMI CTAG 1 cut(s) 1269
StyD4I CCNGG 5 cut(s) 126, 168, 417, 604, 1428
TaaI ACNGT 5 cut(s) 47, 526, 736, 1277, 1367
TaqI TCGA 4 cut(s) 335, 1117, 1148, 1210
TasI AATT 7 cut(s) 387, 423, 641, 724, 874, 1178, 1413
TatI WGTACW 2 cut(s) 438, 938
TauI GCSGC 1 cut(s) 884
TfiI GAWTC 4 cut(s) 165, 227, 999, 1145
Tru1I TTAA 5 cut(s) 107, 614, 1097, 1109, 1416
Tru9I TTAA 5 cut(s) 107, 614, 1097, 1109, 1416
TscAI CASTG 6 cut(s) 637, 659, 739, 1084, 1282, 1357
TseFI GTSAC 1 cut(s) 820
TseI GCWGC 4 cut(s) 557, 560, 866, 1058
Tsp45I GTSAC 1 cut(s) 820
TspDTI ATGAA 4 cut(s) 90, 135, 313, 898
TspGWI ACGGA 2 cut(s) 194, 905
TspRI CASTG 6 cut(s) 637, 659, 739, 1084, 1282, 1357
Tth111I GACNNNGTC 1 cut(s) 581
VpaK11BI GGWCC 2 cut(s) 124, 364
XapI RAATTY 3 cut(s) 423, 641, 874
XceI RCATGY 3 cut(s) 816, 1301, 1348
XcmI CCANNNNNNNNNTGG 1 cut(s) 274
XmiI GTMKAC 2 cut(s) 335, 1359
XmnI GAANNNNTTC 1 cut(s) 505
XspI CTAG 1 cut(s) 1269
Zsp2I ATGCAT 1 cut(s) 814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.