AT5G14230

Ankyrin repeats (many copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0002610
Physical Location & Seq
Forward (+)
4591690 .. 4595964
4275 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G14230.2

Sequence Viewer

Length: 2256 bp
ATGACGGTTTTCTCCGGCAGACAAGTCGTTCCGATGGATTACGAAGCCGAGGTATCACAACGGCTTCTAGAAGCCATCCTCGACGGAGATTTCAAAACGGCATCGGATTGCGTCTCCGATCCACTCGTCGACGTTAATTTCGTCGGCGCCGTCAGCTTAAAAACAAGGAGGAGCGAAGTCGTCCTCCGTGATGAGTCTCCCAGCGAAGTCCGCGTCGAGTACGAAGAATTCAAAACCGATGTAACGGCGTTATTCCTCGCCGTTAATTTCGGAAACGCAGCTCTCGTGAAGGAATTACTGAACATTGGAGCTGATGTGAACCAGAAGCTCTTCAGGGGATTTGCAACAACTGTTGCTGTAAGGGAAGGTCATTTCGATGTCTTTGAGATTCTACTCAAAGCTGGTGCTTCTCAGCCCGCTTGTGAAGAAGCTCTAGTAGGGGCGAGCTGTCACGGACGCTCGAGGTTCGTTGAGCTGCTTATGGGAACTGATCTTATTCGGCCTCAGGTTGCTGTGCATGCTCTCGCCACTGCTTGTTGCAGGGGTTTTGTGGACGTCGTAGGGACCTTGCTCAAATGTGGTGTAGATGCTAATTCAACCGATAGGCTTCTTCTTCAATCTTCGAAACCTTCTCTTTACACAAATGTAGACTGTACAGCTCTTGTTGCTGCCATTGTCAATAGGCAAGTCTCTGCTGTCCGCGTCCTACTACAGGCTGGCGTCAAGACAGATATCATGGTGAGGCTTGGAGCATGGTCATGGGATACTAACACTGGAGAAGAGTTTCGGGTGGGAGCTGGAGTGGCTGAGCCCTATCCTTTAACCTGGTGTGCTGTAGAATACTTTGAAACTAGTGGCGACATTTTGCGTTTGTTGCTCAAACTCCAGTCTCCAAACGCTCTTCACAACGGTCGGACTCTTCTACACCATGCTGTCCTCTGTGGCAACAAGGCAGCCGTCAGTGTCCTCCTTGACTGTGGCGCCGATCCAGAAGCTCCTATCAAAACTTCACGAGGCATTGAACTCAGACCGATTCATATTGCTGCACGTGACGGATCAGTGGAGATCATACAACAACTCGTTGGCTTTGGCTGCGATATAAACTCGAAGAATGATGTAGGGAACACAGCCCTGTTGATCTCAATAAAACACAAACATCCAGAGTGCGTCAAGGTTCTCGCCCTTGATGGTGCTGATTTCGGTTTAGTGAACAAGTTTGGTCATTCTGCTGTTTCGATCGCTGAGTCAAACAAGTGGTCTCTTGGATTAGAGCGAGTAATTCTTGAGCTGATCCGGTTCGGTGTTGTTCCACATTCAAGCAACGCTTCAGTATTCTCGCCTTTGCTATATGGGGCTCAAGCAGGAGATGCTGAGGCGCTTAAAGCGCTTGTAAAAGCTCAAGACATCTACCTAGACTATCAAGATGAGGAAGGCTTTTCGGCTGCAATGCTAGCGGCCATGAATGGCCACGTTGAAGCATTTAGAGTCTTAGTCTACGCAGGCGCAGACGTGAAGCTGTATAACAACTCTGGCGACACGGTAGTCTCTCTGTCTGAACAGAACGGTAACCGTGACGTGATAGAGAAGGTGATGCTCGAGTTTGCTCTCGAGAAGGACAGCAGAAACATGGCAGGCGGGTTTTATGCTTTACACTGTGCTGCACGGCGTGGAGACGTCAAAGCAGTGAAGCTTTTGAGTGGAAAAGGATACAGTCTAGACATCCCGGATGGAGATGGCTACACTCCGCTCATGCTTGCAGCCAGAGAGGGCCATGGACATATGTGTGAATACCTAATCTCCTGTGGCGCAAACTGCAATGCTAAGAACGGAAGAGGGGAAAAGCTGCTGGATCTCGCGACTGGTGATGCGGAGAAGGTGATCCGTAATGAGTTGTCTCGGAGGTTTGTGATAGAAGGAAGCAGTGTGATGAAACACACCAAGGGAGGGAAAGGAAAGAAGCATGGGAAAGGATTGAGAATGTTGGAATCAAGTGGAGTACTAAGTTGGGGAAAGTCACGGAAGAGGACTGTGGTGTGCAAGGAAGTAGAGATCGGGATGAGCCAGCGGTTCAGGAAGAACCGTAAGGGGAAAGGCGATGGAGCGGAGGAGGAAGGGATTTTCCGGGTAGTGACTACGGAAAACAAGGAGGTTCATTTTGTGTGTGAAGGTGGGTTGGTGTGTGCAGAGATGTGGGTGAGGGGAATACGACTTGTGACCAGAGAGACAATTTGTGGAAGAACTCAGACTCAGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000902 GO:0000904 GO:0000910 GO:0001508 GO:0002028 GO:0003008 GO:0003254 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006888 GO:0006892 GO:0006893 GO:0006996 GO:0007009 GO:0007010 GO:0007016 GO:0007049 GO:0007154 GO:0007275 GO:0007399 GO:0007409 GO:0007528 GO:0008092 GO:0008104 GO:0008150 GO:0009653 GO:0009893 GO:0009986 GO:0009987 GO:0010035 GO:0010038 GO:0010256 GO:0010468 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010649 GO:0010650 GO:0010765 GO:0010959 GO:0010960 GO:0012505 GO:0014704 GO:0014731 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0016328 GO:0016528 GO:0016529 GO:0019222 GO:0019226 GO:0019228 GO:0022008 GO:0022402 GO:0022407 GO:0022409 GO:0022607 GO:0022898 GO:0023052 GO:0030016 GO:0030017 GO:0030018 GO:0030030 GO:0030054 GO:0030154 GO:0030155 GO:0030182 GO:0030315 GO:0030424 GO:0030425 GO:0030507 GO:0030674 GO:0031175 GO:0031594 GO:0031674 GO:0032026 GO:0032386 GO:0032388 GO:0032409 GO:0032410 GO:0032411 GO:0032412 GO:0032413 GO:0032414 GO:0032501 GO:0032502 GO:0032507 GO:0032879 GO:0032880 GO:0032989 GO:0032990 GO:0033036 GO:0033157 GO:0033267 GO:0033268 GO:0034110 GO:0034112 GO:0034613 GO:0034762 GO:0034763 GO:0034764 GO:0034765 GO:0034766 GO:0034767 GO:0035637 GO:0036477 GO:0042221 GO:0042383 GO:0042391 GO:0042592 GO:0042886 GO:0042995 GO:0043001 GO:0043005 GO:0043034 GO:0043194 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043266 GO:0043267 GO:0043269 GO:0043270 GO:0043271 GO:0043292 GO:0044085 GO:0044091 GO:0044092 GO:0044093 GO:0044291 GO:0044304 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044456 GO:0044459 GO:0044463 GO:0044464 GO:0045184 GO:0045185 GO:0045202 GO:0045211 GO:0045296 GO:0045760 GO:0045785 GO:0045838 GO:0046907 GO:0048193 GO:0048468 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050808 GO:0050839 GO:0050877 GO:0050896 GO:0051049 GO:0051050 GO:0051051 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051235 GO:0051301 GO:0051641 GO:0051649 GO:0051651 GO:0051716 GO:0055065 GO:0055080 GO:0060090 GO:0060255 GO:0060341 GO:0061024 GO:0061564 GO:0061640 GO:0061951 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071286 GO:0071702 GO:0071705 GO:0071709 GO:0071840 GO:0071944 GO:0072507 GO:0072657 GO:0072658 GO:0072659 GO:0072660 GO:0090087 GO:0090150 GO:0090313 GO:0090314 GO:0090316 GO:0097060 GO:0097447 GO:0097458 GO:0098590 GO:0098771 GO:0098794 GO:0098876 GO:0098900 GO:0098901 GO:0098902 GO:0099080 GO:0099081 GO:0099512 GO:0120025 GO:0120036 GO:0120038 GO:0120039 GO:1900825 GO:1900827 GO:1901016 GO:1901017 GO:1901379 GO:1901380 GO:1902259 GO:1902260 GO:1902305 GO:1902307 GO:1903047 GO:1903533 GO:1903817 GO:1903827 GO:1903829 GO:1904062 GO:1904063 GO:1904064 GO:1904181 GO:1904951 GO:1905475 GO:1905477 GO:1990778 GO:2000649 GO:2000651 GO:2001257 GO:2001258 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_3

Protein Analysis

751

Amino Acids

81.39

Weight (kDa)

6.44

Isoelectric Point (pI)

29.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 124 - 172 6.1e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 185 - 255 7.9e-10 Ankyrin repeats (3 copies)
Ank_4 PF13637 185 - 233 1.4e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 268 - 346 1.8e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 289 - 370 2.6e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 361 - 449 1.4e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 390 - 439 2.9e-10 Ankyrin repeats (many copies)
Ank_5 PF13857 411 - 459 2.5e-06 Ankyrin repeats (many copies)
Ank PF00023 418 - 449 2.3e-08 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1541
AatII GACGTC 2 cut(s) 558, 1677
AccB1I GGYRCC 2 cut(s) 146, 980
AccBSI CCGCTC 2 cut(s) 1747, 2102
AccI GTMKAC 3 cut(s) 129, 648, 1494
AccII CGCG 3 cut(s) 213, 702, 1856
AciI CCGC 9 cut(s) 211, 417, 700, 1454, 1635, 1745, 1868, 2065, 2102
AclWI GGATC 6 cut(s) 113, 980, 1063, 1285, 1857, 1873
AcoI YGGCCR 2 cut(s) 1455, 1465
AcsI RAATTY 1 cut(s) 227
AcuI CTGAAG 2 cut(s) 316, 1311
AcvI CACGTG 1 cut(s) 1049
AcyI GRCGYC 5 cut(s) 147, 555, 720, 981, 1674
AdeI CACNNNGTG 1 cut(s) 1667
AfaI GTAC 3 cut(s) 221, 655, 1998
AfeI AGCGCT 1 cut(s) 1386
AfiI CCNNNNNNNGG 2 cut(s) 712, 1944
AgsI TTSAA 8 cut(s) 94, 232, 597, 617, 848, 1022, 1317, 1475
AhlI ACTAGT 1 cut(s) 851
AjiI CACGTC 2 cut(s) 1510, 1576
AjnI CCWGG 1 cut(s) 824
Alw26I GTCTC 9 cut(s) 118, 201, 694, 894, 1263, 1549, 1665, 1899, 2216
AlwI GGATC 6 cut(s) 113, 980, 1063, 1285, 1857, 1873
Ama87I CYCGRG 3 cut(s) 460, 1595, 1607
Aor51HI AGCGCT 1 cut(s) 1386
AoxI GGCC 4 cut(s) 500, 1455, 1465, 1768
ApoI RAATTY 1 cut(s) 227
ArsI GACNNNNNNTTYG 6 cut(s) 122, 154, 198, 230, 1241, 1273
Asp700I GAANNNNTTC 2 cut(s) 329, 783
AspLEI GCGC 6 cut(s) 149, 983, 1378, 1387, 1505, 1808
AspS9I GGNCC 2 cut(s) 564, 1768
AsuC2I CCSGG 2 cut(s) 1724, 2123
AsuHPI GGTGA 5 cut(s) 751, 1600, 1874, 1888, 2206
AsuII TTCGAA 1 cut(s) 623
AsuNHI GCTAGC 1 cut(s) 1450
AvaI CYCGRG 3 cut(s) 460, 1595, 1607
AvaII GGWCC 1 cut(s) 564
AxyI CCTNAGG 1 cut(s) 504
BalI TGGCCA 1 cut(s) 1467
BanI GGYRCC 2 cut(s) 146, 980
BanII GRGCYC 2 cut(s) 813, 1357
BauI CACGAG 2 cut(s) 284, 1011
BbrPI CACGTG 1 cut(s) 1049
BbvCI CCTCAGC 1 cut(s) 1371
BccI CCATC 6 cut(s) 28, 83, 1181, 1721, 1727, 2090
BceAI ACGGC 7 cut(s) 77, 114, 134, 245, 261, 941, 1679
BcgI CGANNNNNNTGC 2 cut(s) 7, 41
BciT130I CCWGG 1 cut(s) 826
BciVI GTATCC 2 cut(s) 757, 1700
BcnI CCSGG 2 cut(s) 1724, 2123
BcoDI GTCTC 9 cut(s) 118, 201, 694, 894, 1263, 1549, 1665, 1899, 2216
BcuI ACTAGT 1 cut(s) 851
BfaI CTAG 6 cut(s) 68, 434, 852, 1412, 1451, 1715
BfmI CTRYAG 2 cut(s) 710, 834
BfoI RGCGCY 4 cut(s) 150, 984, 1379, 1388
BfuI GTATCC 2 cut(s) 757, 1700
BlpI GCTNAGC 1 cut(s) 807
BmcAI AGTACT 1 cut(s) 1998
Bme1390I CCNGG 3 cut(s) 826, 1724, 2123
Bme18I GGWCC 1 cut(s) 564
BmeT110I CYCGRG 3 cut(s) 460, 1595, 1607
BmgBI CACGTC 2 cut(s) 1510, 1576
BmgT120I GGNCC 2 cut(s) 564, 1768
BmiI GGNNCC 3 cut(s) 148, 565, 982
BmrFI CCNGG 3 cut(s) 826, 1724, 2123
BmsI GCATC 5 cut(s) 110, 577, 1357, 1581, 1855
BmtI GCTAGC 1 cut(s) 1454
BpmI CTGGAG 3 cut(s) 795, 819, 869
Bpu10I CCTNAGC 1 cut(s) 1371
Bpu1102I GCTNAGC 1 cut(s) 807
Bpu14I TTCGAA 1 cut(s) 623
BpuEI CTTGAG 3 cut(s) 1304, 1341, 1383
BpuMI CCSGG 2 cut(s) 1724, 2123
BsaAI YACGTR 1 cut(s) 1049
BsaHI GRCGYC 5 cut(s) 147, 555, 720, 981, 1674
BsaI GGTCTC 1 cut(s) 1263
BsaJI CCNNGG 3 cut(s) 48, 1771, 1938
BsaWI WCCGGW 1 cut(s) 1293
BsaXI ACNNNNNCTCC 6 cut(s) 300, 330, 786, 816, 1781, 1811
Bsc4I CCNNNNNNNGG 2 cut(s) 712, 1944
Bse1I ACTGG 3 cut(s) 778, 886, 1864
Bse21I CCTNAGG 1 cut(s) 504
Bse3DI GCAATG 2 cut(s) 1452, 1822
BseBI CCWGG 1 cut(s) 826
BseDI CCNNGG 3 cut(s) 48, 1771, 1938
BseGI GGATG 5 cut(s) 75, 1156, 1719, 1732, 2061
BseLI CCNNNNNNNGG 2 cut(s) 712, 1944
BseMI GCAATG 2 cut(s) 1452, 1822
BseMII CTCAG 7 cut(s) 425, 518, 798, 1039, 1233, 1362, 2255
BseNI ACTGG 3 cut(s) 778, 886, 1864
BseRI GAGGAG 2 cut(s) 184, 2120
BseYI CCCAGC 1 cut(s) 200
BsgI GTGCAG 3 cut(s) 1029, 1644, 2202
Bsh1236I CGCG 3 cut(s) 213, 702, 1856
Bsh1285I CGRYCG 2 cut(s) 913, 1239
BshFI GGCC 4 cut(s) 502, 1457, 1467, 1770
BshNI GGYRCC 2 cut(s) 146, 980
BsiEI CGRYCG 2 cut(s) 913, 1239
BsiHKCI CYCGRG 3 cut(s) 460, 1595, 1607
BsiSI CCGG 4 cut(s) 15, 1294, 1724, 2122
BslFI GGGAC 1 cut(s) 577
BslI CCNNNNNNNGG 2 cut(s) 712, 1944
BsmAI GTCTC 9 cut(s) 118, 201, 694, 894, 1263, 1549, 1665, 1899, 2216
BsmBI CGTCTC 2 cut(s) 118, 1665
BsmFI GGGAC 1 cut(s) 577
BsnI GGCC 4 cut(s) 502, 1457, 1467, 1770
Bso31I GGTCTC 1 cut(s) 1263
BsoBI CYCGRG 3 cut(s) 460, 1595, 1607
Bsp119I TTCGAA 1 cut(s) 623
Bsp1286I GDGCHC 2 cut(s) 813, 1357
Bsp1407I TGTACA 1 cut(s) 653
Bsp1720I GCTNAGC 1 cut(s) 807
Bsp19I CCATGG 1 cut(s) 1771
Bsp68I TCGCGA 1 cut(s) 1856
BspACI CCGC 9 cut(s) 211, 417, 700, 1454, 1635, 1745, 1868, 2065, 2102
BspANI GGCC 4 cut(s) 502, 1457, 1467, 1770
BspCNI CTCAG 7 cut(s) 424, 517, 799, 1038, 1234, 1363, 2254
BspFNI CGCG 3 cut(s) 213, 702, 1856
BspLI GGNNCC 3 cut(s) 148, 565, 982
BspOI GCTAGC 1 cut(s) 1454
BspPI GGATC 6 cut(s) 113, 980, 1063, 1285, 1857, 1873
BspQI GCTCTTC 2 cut(s) 335, 906
BspT104I TTCGAA 1 cut(s) 623
BspT107I GGYRCC 2 cut(s) 146, 980
BspTNI GGTCTC 1 cut(s) 1263
BsrBI CCGCTC 2 cut(s) 1747, 2102
BsrDI GCAATG 2 cut(s) 1452, 1822
BsrGI TGTACA 1 cut(s) 653
BsrI ACTGG 3 cut(s) 778, 886, 1864
BssECI CCNNGG 3 cut(s) 48, 1771, 1938
BssNI GRCGYC 5 cut(s) 147, 555, 720, 981, 1674
BssSI CACGAG 2 cut(s) 284, 1011
BssT1I CCWWGG 2 cut(s) 1771, 1938
Bst2BI CACGAG 2 cut(s) 284, 1011
Bst2UI CCWGG 1 cut(s) 826
Bst6I CTCTTC 6 cut(s) 335, 774, 906, 924, 1825, 2015
BstACI GRCGYC 5 cut(s) 147, 555, 720, 981, 1674
BstAPI GCANNNNNTGC 1 cut(s) 1367
BstAUI TGTACA 1 cut(s) 653
BstBAI YACGTR 1 cut(s) 1049
BstBI TTCGAA 1 cut(s) 623
BstC8I GCNNGC 9 cut(s) 417, 445, 519, 718, 1452, 1501, 1633, 1755, 2063
BstDSI CCRYGG 1 cut(s) 1771
BstEII GGTNACC 1 cut(s) 1565
BstENI CCTNNNNNAGG 1 cut(s) 710
BstF5I GGATG 5 cut(s) 75, 1156, 1719, 1732, 2061
BstFNI CGCG 3 cut(s) 213, 702, 1856
BstH2I RGCGCY 4 cut(s) 150, 984, 1379, 1388
BstHHI GCGC 6 cut(s) 149, 983, 1378, 1387, 1505, 1808
BstMAI GTCTC 9 cut(s) 118, 201, 694, 894, 1263, 1549, 1665, 1899, 2216
BstMCI CGRYCG 2 cut(s) 913, 1239
BstNI CCWGG 1 cut(s) 826
BstNSI RCATGY 1 cut(s) 521
BstPI GGTNACC 1 cut(s) 1565
BstSCI CCNGG 3 cut(s) 824, 1722, 2121
BstSFI CTRYAG 2 cut(s) 710, 834
BstUI CGCG 3 cut(s) 213, 702, 1856
BstX2I RGATCY 1 cut(s) 1849
BstYI RGATCY 1 cut(s) 1849
Bsu36I CCTNAGG 1 cut(s) 504
BsuI GTATCC 2 cut(s) 757, 1700
BsuRI GGCC 4 cut(s) 502, 1457, 1467, 1770
BtgI CCRYGG 1 cut(s) 1771
BtgZI GCGATG 1 cut(s) 2109
BtrI CACGTC 2 cut(s) 1510, 1576
BtsCI GGATG 5 cut(s) 75, 1156, 1719, 1732, 2061
BtsI GCAGTG 3 cut(s) 528, 1689, 1927
BtsIMutI CAGTG 7 cut(s) 528, 771, 967, 1065, 1651, 1689, 1927
BtuMI TCGCGA 1 cut(s) 1856
Cac8I GCNNGC 9 cut(s) 417, 445, 519, 718, 1452, 1501, 1633, 1755, 2063
CfoI GCGC 6 cut(s) 149, 983, 1378, 1387, 1505, 1808
Cfr13I GGNCC 2 cut(s) 564, 1768
CseI GACGC 6 cut(s) 100, 202, 465, 691, 709, 1156
CsiI ACCWGGT 1 cut(s) 824
Csp6I GTAC 3 cut(s) 220, 654, 1997
CviQI GTAC 3 cut(s) 220, 654, 1997
DinI GGCGCC 2 cut(s) 148, 982
DraIII CACNNNGTG 1 cut(s) 1667
DrdI GACNNNNNNGTC 1 cut(s) 1541
DseDI GACNNNNNNGTC 1 cut(s) 1541
EaeI YGGCCR 2 cut(s) 1455, 1465
Eam1104I CTCTTC 6 cut(s) 335, 774, 906, 924, 1825, 2015
EarI CTCTTC 6 cut(s) 335, 774, 906, 924, 1825, 2015
Eco130I CCWWGG 2 cut(s) 1771, 1938
Eco24I GRGCYC 2 cut(s) 813, 1357
Eco31I GGTCTC 1 cut(s) 1263
Eco32I GATATC 1 cut(s) 733
Eco47I GGWCC 1 cut(s) 564
Eco47III AGCGCT 1 cut(s) 1386
Eco57I CTGAAG 2 cut(s) 316, 1311
Eco72I CACGTG 1 cut(s) 1049
Eco81I CCTNAGG 1 cut(s) 504
Eco88I CYCGRG 3 cut(s) 460, 1595, 1607
Eco91I GGTNACC 1 cut(s) 1565
EcoNI CCTNNNNNAGG 1 cut(s) 710
EcoO109I RGGNCCY 1 cut(s) 564
EcoO65I GGTNACC 1 cut(s) 1565
EcoRI GAATTC 1 cut(s) 227
EcoRII CCWGG 1 cut(s) 824
EcoRV GATATC 1 cut(s) 733
EcoT14I CCWWGG 2 cut(s) 1771, 1938
EcoT38I GRGCYC 2 cut(s) 813, 1357
EgeI GGCGCC 2 cut(s) 148, 982
EheI GGCGCC 2 cut(s) 148, 982
ErhI CCWWGG 2 cut(s) 1771, 1938
Esp3I CGTCTC 2 cut(s) 118, 1665
FalI AAGNNNNNCTT 2 cut(s) 1309, 1341
FaqI GGGAC 1 cut(s) 577
FauI CCCGC 2 cut(s) 424, 1628
FauNDI CATATG 1 cut(s) 1779
FblI GTMKAC 3 cut(s) 129, 648, 1494
FokI GGATG 5 cut(s) 62, 1143, 1706, 1739, 2068
FriOI GRGCYC 2 cut(s) 813, 1357
FspBI CTAG 6 cut(s) 68, 434, 852, 1412, 1451, 1715
GlaI GCGC 6 cut(s) 148, 982, 1377, 1386, 1504, 1807
GsaI CCCAGC 1 cut(s) 204
GsuI CTGGAG 3 cut(s) 795, 819, 869
HaeII RGCGCY 4 cut(s) 150, 984, 1379, 1388
HaeIII GGCC 4 cut(s) 502, 1457, 1467, 1770
HapII CCGG 4 cut(s) 15, 1294, 1724, 2122
HgaI GACGC 6 cut(s) 100, 202, 465, 691, 709, 1156
HhaI GCGC 6 cut(s) 149, 983, 1378, 1387, 1505, 1808
Hin1I GRCGYC 5 cut(s) 147, 555, 720, 981, 1674
Hin6I GCGC 6 cut(s) 147, 981, 1376, 1385, 1503, 1806
HinP1I GCGC 6 cut(s) 147, 981, 1376, 1385, 1503, 1806
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HindIII AAGCTT 1 cut(s) 1688
HinfI GANTC 8 cut(s) 194, 388, 916, 1033, 1244, 1485, 1985, 2245
HpaII CCGG 4 cut(s) 15, 1294, 1724, 2122
HphI GGTGA 5 cut(s) 751, 1600, 1874, 1888, 2206
Hpy166II GTNNAC 6 cut(s) 130, 319, 553, 649, 1210, 1495
Hpy8I GTNNAC 6 cut(s) 130, 319, 553, 649, 1210, 1495
Hpy99I CGWCG 6 cut(s) 86, 131, 134, 146, 218, 560
HpyCH4IV ACGT 7 cut(s) 132, 555, 1048, 1470, 1509, 1575, 1674
HpySE526I ACGT 7 cut(s) 132, 555, 1048, 1470, 1509, 1575, 1674
Hsp92I GRCGYC 5 cut(s) 147, 555, 720, 981, 1674
HspAI GCGC 6 cut(s) 147, 981, 1376, 1385, 1503, 1806
KasI GGCGCC 2 cut(s) 146, 980
LguI GCTCTTC 2 cut(s) 335, 906
LmnI GCTCC 6 cut(s) 171, 308, 749, 794, 1000, 2099
LweI GCATC 5 cut(s) 110, 577, 1357, 1581, 1855
MabI ACCWGGT 1 cut(s) 824
MaeI CTAG 6 cut(s) 68, 434, 852, 1412, 1451, 1715
MaeII ACGT 7 cut(s) 132, 555, 1048, 1470, 1509, 1575, 1674
MaeIII GTNAC 8 cut(s) 241, 449, 1049, 1565, 1571, 2013, 2128, 2212
MbiI CCGCTC 2 cut(s) 1747, 2102
MflI RGATCY 1 cut(s) 1849
MhlI GDGCHC 2 cut(s) 813, 1357
MlsI TGGCCA 1 cut(s) 1467
MluCI AATT 8 cut(s) 136, 227, 265, 293, 592, 1278, 2226, 2251
MluNI TGGCCA 1 cut(s) 1467
Mly113I GGCGCC 2 cut(s) 147, 981
MlyI GAGTC 5 cut(s) 203, 910, 1253, 1494, 2239
MmeI TCCRAC 2 cut(s) 893, 1962
Mox20I TGGCCA 1 cut(s) 1467
MroXI GAANNNNTTC 2 cut(s) 329, 783
MscI TGGCCA 1 cut(s) 1467
MseI TTAA 5 cut(s) 135, 158, 264, 821, 1380
MslI CAYNNNNRTG 3 cut(s) 375, 757, 1782
Msp20I TGGCCA 1 cut(s) 1467
MspA1I CMGCKG 1 cut(s) 2065
MspI CCGG 4 cut(s) 15, 1294, 1724, 2122
MspR9I CCNGG 3 cut(s) 826, 1724, 2123
MvaI CCWGG 1 cut(s) 826
MvnI CGCG 3 cut(s) 213, 702, 1856
NarI GGCGCC 2 cut(s) 147, 981
NciI CCSGG 2 cut(s) 1724, 2123
NcoI CCATGG 1 cut(s) 1771
NdeI CATATG 1 cut(s) 1779
NheI GCTAGC 1 cut(s) 1450
NlaIV GGNNCC 3 cut(s) 148, 565, 982
NmeAIII GCCGAG 1 cut(s) 73
NmuCI GTSAC 6 cut(s) 449, 1049, 1571, 2013, 2128, 2212
NruI TCGCGA 1 cut(s) 1856
NspI RCATGY 1 cut(s) 521
NspV TTCGAA 1 cut(s) 623
PaeI GCATGC 1 cut(s) 521
PaeR7I CTCGAG 3 cut(s) 460, 1595, 1607
PciSI GCTCTTC 2 cut(s) 335, 906
PcsI WCGNNNNNNNCGW 3 cut(s) 138, 147, 282
PdmI GAANNNNTTC 2 cut(s) 329, 783
PfeI GAWTC 3 cut(s) 388, 1033, 1985
PfoI TCCNGGA 1 cut(s) 1722
Ple19I CGATCG 1 cut(s) 1239
PleI GAGTC 5 cut(s) 202, 910, 1252, 1493, 2239
PluTI GGCGCC 2 cut(s) 150, 984
PmaCI CACGTG 1 cut(s) 1049
PmlI CACGTG 1 cut(s) 1049
PpsI GAGTC 5 cut(s) 202, 910, 1252, 1493, 2239
Ppu21I YACGTR 1 cut(s) 1049
PpuMI RGGWCCY 1 cut(s) 564
Psp5II RGGWCCY 1 cut(s) 564
Psp6I CCWGG 1 cut(s) 824
PspCI CACGTG 1 cut(s) 1049
PspEI GGTNACC 1 cut(s) 1565
PspFI CCCAGC 1 cut(s) 200
PspGI CCWGG 1 cut(s) 824
PspN4I GGNNCC 3 cut(s) 148, 565, 982
PspPI GGNCC 2 cut(s) 564, 1768
PspPPI RGGWCCY 1 cut(s) 564
PspXI VCTCGAGB 2 cut(s) 460, 1595
PsuI RGATCY 1 cut(s) 1849
PvuI CGATCG 1 cut(s) 1239
RruI TCGCGA 1 cut(s) 1856
RsaI GTAC 3 cut(s) 221, 655, 1998
RsaNI GTAC 3 cut(s) 220, 654, 1997
RseI CAYNNNNRTG 3 cut(s) 375, 757, 1782
SalI GTCGAC 1 cut(s) 128
SapI GCTCTTC 2 cut(s) 335, 906
SaqAI TTAA 5 cut(s) 135, 158, 264, 821, 1380
Sau96I GGNCC 2 cut(s) 564, 1768
ScaI AGTACT 1 cut(s) 1998
SchI GAGTC 5 cut(s) 203, 910, 1253, 1494, 2239
ScrFI CCNGG 3 cut(s) 826, 1724, 2123
SduI GDGCHC 2 cut(s) 813, 1357
SexAI ACCWGGT 1 cut(s) 824
SfaNI GCATC 5 cut(s) 110, 577, 1357, 1581, 1855
SfcI CTRYAG 2 cut(s) 710, 834
SfoI GGCGCC 2 cut(s) 148, 982
Sfr274I CTCGAG 3 cut(s) 460, 1595, 1607
SfuI TTCGAA 1 cut(s) 623
SgrDI CGTCGACG 1 cut(s) 128
SinI GGWCC 1 cut(s) 564
SlaI CTCGAG 3 cut(s) 460, 1595, 1607
SmiMI CAYNNNNRTG 3 cut(s) 375, 757, 1782
SmlI CTYRAG 6 cut(s) 460, 1283, 1356, 1398, 1595, 1607
SmoI CTYRAG 6 cut(s) 460, 1283, 1356, 1398, 1595, 1607
SpeI ACTAGT 1 cut(s) 851
SphI GCATGC 1 cut(s) 521
Sse9I AATT 8 cut(s) 136, 227, 265, 293, 592, 1278, 2226, 2251
SsiI CCGC 9 cut(s) 211, 417, 700, 1454, 1635, 1745, 1868, 2065, 2102
SspDI GGCGCC 2 cut(s) 146, 980
SspMI CTAG 6 cut(s) 68, 434, 852, 1412, 1451, 1715
StyD4I CCNGG 3 cut(s) 824, 1722, 2121
StyI CCWWGG 2 cut(s) 1771, 1938
TaiI ACGT 7 cut(s) 135, 558, 1051, 1473, 1512, 1578, 1677
TaqII GACCGA 1 cut(s) 1045
TasI AATT 8 cut(s) 136, 227, 265, 293, 592, 1278, 2226, 2251
TatI WGTACW 2 cut(s) 653, 1996
TauI GCSGC 1 cut(s) 1457
TfiI GAWTC 3 cut(s) 388, 1033, 1985
Tru1I TTAA 5 cut(s) 135, 158, 264, 821, 1380
Tru9I TTAA 5 cut(s) 135, 158, 264, 821, 1380
TscAI CASTG 7 cut(s) 535, 778, 967, 1065, 1658, 1689, 1927
TseFI GTSAC 6 cut(s) 449, 1049, 1571, 2013, 2128, 2212
Tsp45I GTSAC 6 cut(s) 449, 1049, 1571, 2013, 2128, 2212
TspDTI ATGAA 4 cut(s) 1025, 1475, 1943, 2141
TspGWI ACGGA 8 cut(s) 99, 176, 468, 1068, 1842, 1871, 2032, 2150
TspRI CASTG 7 cut(s) 535, 778, 967, 1065, 1658, 1689, 1927
VpaK11BI GGWCC 1 cut(s) 564
XagI CCTNNNNNAGG 1 cut(s) 710
XapI RAATTY 1 cut(s) 227
XbaI TCTAGA 2 cut(s) 67, 1714
XceI RCATGY 1 cut(s) 521
XhoI CTCGAG 3 cut(s) 460, 1595, 1607
XmiI GTMKAC 3 cut(s) 129, 648, 1494
XmnI GAANNNNTTC 2 cut(s) 329, 783
XspI CTAG 6 cut(s) 68, 434, 852, 1412, 1451, 1715
ZraI GACGTC 2 cut(s) 556, 1675
ZrmI AGTACT 1 cut(s) 1998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.