Rh2DG685700

Ankyrin repeats (many copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0002610
Physical Location & Seq
Reverse (-)
90416216 .. 90419315
3100 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG685700.1

Sequence Viewer

Length: 1773 bp
ATGTCCTCTGACTTGATCCGGCCCCATCTTGCTGTACATGCTATTGTCATAGCATGCTGCAGGGGGTTTGTGGATGTGGTTGACACTCTCATGAAGTGTGGTGTCGATGCAAGTGCAGTCGATAGGATACTGCTTCAGTCATCTAAGCCTTCTCTGCACACCAATGTCGACTGTAGTGCACTGGTAGCTGCAGTTGTTAGCAGGCAGGTTGCTACTGTCCGTTTGCTGCTAAAGGCTGGTGCAAGGACAGATGTCCAAGTGAGGCTGGGAGCATGGTCATGGGACATAGCTACAGGGGAAGAGTTGCGCGTTGGTGCAGGACTGGCTGAACCTTATCCCATTACTTGGTGTGCAGTGGAATACTTTGAAGCTAGTGGTTCAATCTTGCACTTGCTCCTCCAAAATATTTCCCCTAATACCCCTTATTGCGGAAGAACTCTCCTGCACCATGCCGTCCTATGTGGCAATGTAGGAGCTGTGCGTGCGCTACTACATTGTGGTGCCAATGTAGAATCGCCTGTTAAAACAACTGGGAAGACAATGTTCAATGCAATACACATGGCCGCCCGCCTTGGTTTGTCAGCAGTCCTTCAATGTTTGATCGATTCTGGCTGTGATATAAACTCCAAGACAGACTCTGGTGAGACAGCTCTAATGATCTGTGCAAAATATAAACATGAAGAGTGTCTCAGAGTATTGGCCATGGCTGGTGCTGATTTTGGCTTGGTCAATGTTGCTGCTCAGTCTGTCAGTTCAATTGCTGTCACAAACCGGTGGTCCCTTGGTTTTCAGGAGGCATTGGTAGATATAATAAGAATCGGCAAGATACCTAAATCCAGCAACTTTTCTGTTTTCTCTCCCCTGATGTTTGTCGCTCAAGCTGGTGATATTGAGGCCTTGAAAGCTATAGTTGATTCAGGAGAATTTGAGATTGATTATCAGGATGATAAAGGTTTTAGTCCAGTCATGATCACTGCTTTGGAGGGCCACGTTGAAGCATTCCAGTTGCTGGTTTATGCAGGAGCTGATGTAAAGTTGTGCAACAAATCTGGTGAGACTGCAATTACTCTATCAGCATTAAGCCAAAACCGTGACCTATTCGAGAAGGTGATGCTTGAATTTGCACTCGAAAAGGGTAATCGCTATGCTGGGGGTTTCTATGCTCTACATTGTGCTGCACGTCGTGGGGACATGGATGCAGCCAAGTTGTTAACAGGTAGGGGTTACGATGTAAATGTCCCTGATGGAGATGGTTACACACCTCTCATGTTAGCAGCCAGGGAAGGCTATGGTACCATGTGTGAACTCTTGATCTCTCATGGGGCCAAGCTAGAGGTCATGAATGCTAAAGGCGAAACGCCACTCTCACTTGCAAGGAAAAGGGGTGGTTTGAAAAATGATGCTGAGCGTGTGATTCTGGATGAACTTGCTCGCATGCTGGTGCTACGTGGGGCTCGGGTTCTCAAGCACACAAAGGGCGGGAAAGGAAGTCCTCATGAGAAAGATCTGAGAATGGTGGGGAGTGAAGGGGTGCTGCGATGGGGCAAGTCAAATCAGAGAAATGTGATATGCCGAGAGGCTGAGGTGAGAGCTAGCCCGGCTTTTATCAGGAACAGGGGGAGCAAGAGTGATGTCAATGATGCTGGAGTGTTTAGGGTTGTGACTACCAAAAACAAGGAGGTGCATTTTGTGTGCGAAGGTGGGGTTGAACTGGCCGAGCTTTGGGTGAGGGGTATAACACTTGTGACCAAAGAGGCTGGCTATTTTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000902 GO:0000904 GO:0000910 GO:0001508 GO:0002028 GO:0003008 GO:0003254 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006888 GO:0006892 GO:0006893 GO:0006996 GO:0007009 GO:0007010 GO:0007016 GO:0007049 GO:0007154 GO:0007275 GO:0007399 GO:0007409 GO:0007528 GO:0008092 GO:0008104 GO:0008150 GO:0009653 GO:0009893 GO:0009986 GO:0009987 GO:0010035 GO:0010038 GO:0010256 GO:0010468 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010649 GO:0010650 GO:0010765 GO:0010959 GO:0010960 GO:0012505 GO:0014704 GO:0014731 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0016328 GO:0016528 GO:0016529 GO:0019222 GO:0019226 GO:0019228 GO:0022008 GO:0022402 GO:0022407 GO:0022409 GO:0022607 GO:0022898 GO:0023052 GO:0030016 GO:0030017 GO:0030018 GO:0030030 GO:0030054 GO:0030154 GO:0030155 GO:0030182 GO:0030315 GO:0030424 GO:0030425 GO:0030507 GO:0030674 GO:0031175 GO:0031594 GO:0031674 GO:0032026 GO:0032386 GO:0032388 GO:0032409 GO:0032410 GO:0032411 GO:0032412 GO:0032413 GO:0032414 GO:0032501 GO:0032502 GO:0032507 GO:0032879 GO:0032880 GO:0032989 GO:0032990 GO:0033036 GO:0033157 GO:0033267 GO:0033268 GO:0034110 GO:0034112 GO:0034613 GO:0034762 GO:0034763 GO:0034764 GO:0034765 GO:0034766 GO:0034767 GO:0035637 GO:0036477 GO:0042221 GO:0042383 GO:0042391 GO:0042592 GO:0042886 GO:0042995 GO:0043001 GO:0043005 GO:0043034 GO:0043194 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043266 GO:0043267 GO:0043269 GO:0043270 GO:0043271 GO:0043292 GO:0044085 GO:0044091 GO:0044092 GO:0044093 GO:0044291 GO:0044304 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044456 GO:0044459 GO:0044463 GO:0044464 GO:0045184 GO:0045185 GO:0045202 GO:0045211 GO:0045296 GO:0045760 GO:0045785 GO:0045838 GO:0046907 GO:0048193 GO:0048468 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050808 GO:0050839 GO:0050877 GO:0050896 GO:0051049 GO:0051050 GO:0051051 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051235 GO:0051301 GO:0051641 GO:0051649 GO:0051651 GO:0051716 GO:0055065 GO:0055080 GO:0060090 GO:0060255 GO:0060341 GO:0061024 GO:0061564 GO:0061640 GO:0061951 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071286 GO:0071702 GO:0071705 GO:0071709 GO:0071840 GO:0071944 GO:0072507 GO:0072657 GO:0072658 GO:0072659 GO:0072660 GO:0090087 GO:0090150 GO:0090313 GO:0090314 GO:0090316 GO:0097060 GO:0097447 GO:0097458 GO:0098590 GO:0098771 GO:0098794 GO:0098876 GO:0098900 GO:0098901 GO:0098902 GO:0099080 GO:0099081 GO:0099512 GO:0120025 GO:0120036 GO:0120038 GO:0120039 GO:1900825 GO:1900827 GO:1901016 GO:1901017 GO:1901379 GO:1901380 GO:1902259 GO:1902260 GO:1902305 GO:1902307 GO:1903047 GO:1903533 GO:1903817 GO:1903827 GO:1903829 GO:1904062 GO:1904063 GO:1904064 GO:1904181 GO:1904951 GO:1905475 GO:1905477 GO:1990778 GO:2000649 GO:2000651 GO:2001257 GO:2001258 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_3

Protein Analysis

590

Amino Acids

63.62

Weight (kDa)

7.52

Isoelectric Point (pI)

27.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 182 - 241 1.9e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 288 - 368 2.3e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 323 - 415 1.7e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 389 - 462 1.5e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 389 - 438 6.5e-09 Ankyrin repeats (many copies)
Ank_5 PF13857 410 - 458 9.2e-06 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 196
Acc65I GGTACC 1 cut(s) 1292
AccB1I GGYRCC 2 cut(s) 500, 1292
AccB7I CCANNNNNTGG 2 cut(s) 345, 1009
AccI GTMKAC 1 cut(s) 168
AccII CGCG 1 cut(s) 309
AciI CCGC 4 cut(s) 429, 564, 568, 1479
AclWI GGATC 1 cut(s) 10
AcoI YGGCCR 3 cut(s) 561, 699, 1713
AcsI RAATTY 2 cut(s) 923, 1118
AcuI CTGAAG 1 cut(s) 119
AdeI CACNNNGTG 1 cut(s) 1184
AfaI GTAC 2 cut(s) 36, 1294
AfiI CCNNNNNNNGG 4 cut(s) 345, 428, 1009, 1722
AgeI ACCGGT 1 cut(s) 771
AjiI CACGTC 1 cut(s) 1181
AjnI CCWGG 1 cut(s) 1277
Alw21I GWGCWC 1 cut(s) 181
Alw26I GTCTC 3 cut(s) 638, 692, 1049
Alw44I GTGCAC 1 cut(s) 177
AlwI GGATC 1 cut(s) 10
AlwNI CAGNNNCTG 3 cut(s) 638, 1009, 1025
Ama87I CYCGRG 1 cut(s) 1455
AoxI GGCC 7 cut(s) 20, 561, 699, 894, 985, 1323, 1713
ApaLI GTGCAC 1 cut(s) 177
ApeKI GCWGC 8 cut(s) 57, 188, 226, 737, 1175, 1199, 1274, 1534
ApoI RAATTY 2 cut(s) 923, 1118
ArsI GACNNNNNNTTYG 2 cut(s) 761, 793
AsiGI ACCGGT 1 cut(s) 771
Asp718I GGTACC 1 cut(s) 1292
AspLEI GCGC 2 cut(s) 309, 487
AspS9I GGNCC 4 cut(s) 21, 777, 985, 1323
AsuC2I CCSGG 1 cut(s) 1598
AsuHPI GGTGA 6 cut(s) 653, 896, 1064, 1120, 1597, 1738
AsuNHI GCTAGC 1 cut(s) 1592
AvaI CYCGRG 1 cut(s) 1455
AvaII GGWCC 1 cut(s) 777
BaeGI GKGCMC 1 cut(s) 181
BalI TGGCCA 1 cut(s) 701
BanI GGYRCC 2 cut(s) 500, 1292
BanII GRGCYC 1 cut(s) 1456
BbsI GAAGAC 1 cut(s) 542
Bbv12I GWGCWC 1 cut(s) 181
BbvCI CCTCAGC 1 cut(s) 1581
BbvI GCAGC 8 cut(s) 44, 175, 213, 724, 1162, 1211, 1286, 1521
BccI CCATC 4 cut(s) 33, 1238, 1244, 1533
BceAI ACGGC 1 cut(s) 437
BcgI CGANNNNNNTGC 4 cut(s) 95, 129, 158, 192
BciT130I CCWGG 1 cut(s) 1279
BciVI GTATCC 1 cut(s) 120
BclI TGATCA 1 cut(s) 969
BcnI CCSGG 1 cut(s) 1598
BcoDI GTCTC 3 cut(s) 638, 692, 1049
BfaI CTAG 3 cut(s) 372, 1331, 1593
BfmI CTRYAG 5 cut(s) 58, 172, 189, 291, 906
BfuAI ACCTGC 1 cut(s) 196
BfuI GTATCC 1 cut(s) 120
BglII AGATCT 1 cut(s) 1504
BisI GCNGC 9 cut(s) 58, 189, 227, 564, 738, 1176, 1200, 1275, 1535
BlpI GCTNAGC 1 cut(s) 1404
BlsI GCNGC 9 cut(s) 59, 190, 228, 565, 739, 1177, 1201, 1276, 1536
Bme1390I CCNGG 2 cut(s) 1279, 1598
Bme18I GGWCC 1 cut(s) 777
BmeT110I CYCGRG 1 cut(s) 1455
BmgBI CACGTC 1 cut(s) 1181
BmgT120I GGNCC 4 cut(s) 21, 777, 985, 1323
BmiI GGNNCC 5 cut(s) 23, 502, 779, 1294, 1324
BmrFI CCNGG 2 cut(s) 1279, 1598
BmrI ACTGGG 1 cut(s) 540
BmsI GCATC 5 cut(s) 97, 1101, 1186, 1390, 1630
BmtI GCTAGC 1 cut(s) 1596
BmuI ACTGGG 1 cut(s) 540
BoxI GACNNNNGTC 1 cut(s) 251
BpiI GAAGAC 1 cut(s) 542
BpmI CTGGAG 1 cut(s) 1665
Bpu10I CCTNAGC 1 cut(s) 1581
Bpu1102I GCTNAGC 1 cut(s) 1404
BpuEI CTTGAG 2 cut(s) 861, 1448
BpuMI CCSGG 1 cut(s) 1598
Bsa29I ATCGAT 1 cut(s) 603
BsaAI YACGTR 1 cut(s) 1448
BsaJI CCNNGG 4 cut(s) 571, 702, 781, 1278
BsaWI WCCGGW 1 cut(s) 771
BsaXI ACNNNNNCTCC 4 cut(s) 1014, 1044, 1612, 1642
Bsc4I CCNNNNNNNGG 4 cut(s) 345, 428, 1009, 1722
Bse118I RCCGGY 1 cut(s) 771
Bse1I ACTGG 6 cut(s) 186, 327, 535, 962, 1003, 1716
Bse3DI GCAATG 1 cut(s) 472
BseBI CCWGG 1 cut(s) 1279
BseCI ATCGAT 1 cut(s) 603
BseDI CCNNGG 4 cut(s) 571, 702, 781, 1278
BseGI GGATG 4 cut(s) 79, 949, 1201, 1426
BseLI CCNNNNNNNGG 4 cut(s) 345, 428, 1009, 1722
BseMI GCAATG 1 cut(s) 472
BseMII CTCAG 5 cut(s) 703, 755, 1395, 1499, 1572
BseNI ACTGG 6 cut(s) 186, 327, 535, 962, 1003, 1716
BseRI GAGGAG 1 cut(s) 386
BseSI GKGCMC 1 cut(s) 181
BseXI GCAGC 8 cut(s) 44, 175, 213, 724, 1162, 1211, 1286, 1521
BseYI CCCAGC 2 cut(s) 265, 1148
BsgI GTGCAG 6 cut(s) 135, 140, 336, 372, 428, 1161
Bsh1236I CGCG 1 cut(s) 309
BshFI GGCC 7 cut(s) 22, 563, 701, 896, 987, 1325, 1715
BshNI GGYRCC 2 cut(s) 500, 1292
BshTI ACCGGT 1 cut(s) 771
BshVI ATCGAT 1 cut(s) 603
BsiHKAI GWGCWC 1 cut(s) 181
BsiHKCI CYCGRG 1 cut(s) 1455
BsiSI CCGG 3 cut(s) 19, 772, 1598
BslFI GGGAC 4 cut(s) 296, 763, 1202, 1223
BslI CCNNNNNNNGG 4 cut(s) 345, 428, 1009, 1722
BsmAI GTCTC 3 cut(s) 638, 692, 1049
BsmFI GGGAC 4 cut(s) 296, 763, 1202, 1223
BsmI GAATGC 2 cut(s) 998, 1348
BsnI GGCC 7 cut(s) 22, 563, 701, 896, 987, 1325, 1715
BsoBI CYCGRG 1 cut(s) 1455
Bsp1286I GDGCHC 2 cut(s) 181, 1456
Bsp1407I TGTACA 1 cut(s) 34
Bsp143I GATC 6 cut(s) 15, 600, 657, 969, 1311, 1504
Bsp1720I GCTNAGC 1 cut(s) 1404
Bsp19I CCATGG 1 cut(s) 702
BspACI CCGC 4 cut(s) 429, 564, 568, 1479
BspANI GGCC 7 cut(s) 22, 563, 701, 896, 987, 1325, 1715
BspCNI CTCAG 5 cut(s) 702, 754, 1396, 1500, 1573
BspDI ATCGAT 1 cut(s) 603
BspFNI CGCG 1 cut(s) 309
BspHI TCATGA 4 cut(s) 90, 966, 1338, 1495
BspLI GGNNCC 5 cut(s) 23, 502, 779, 1294, 1324
BspMAI CTGCAG 2 cut(s) 62, 193
BspMI ACCTGC 1 cut(s) 196
BspOI GCTAGC 1 cut(s) 1596
BspPI GGATC 1 cut(s) 10
BspT107I GGYRCC 2 cut(s) 500, 1292
BsrDI GCAATG 1 cut(s) 472
BsrFI RCCGGY 1 cut(s) 771
BsrGI TGTACA 1 cut(s) 34
BsrI ACTGG 6 cut(s) 186, 327, 535, 962, 1003, 1716
BssAI RCCGGY 1 cut(s) 771
BssECI CCNNGG 4 cut(s) 571, 702, 781, 1278
BssMI GATC 6 cut(s) 15, 600, 657, 969, 1311, 1504
BssT1I CCWWGG 3 cut(s) 571, 702, 781
Bst2UI CCWGG 1 cut(s) 1279
Bst4CI ACNGT 3 cut(s) 173, 217, 1091
Bst6I CTCTTC 2 cut(s) 294, 675
BstAUI TGTACA 1 cut(s) 34
BstBAI YACGTR 1 cut(s) 1448
BstC8I GCNNGC 8 cut(s) 55, 203, 483, 568, 1432, 1436, 1594, 1759
BstDEI CTNAG 6 cut(s) 144, 689, 741, 1404, 1508, 1581
BstDSI CCRYGG 1 cut(s) 702
BstF5I GGATG 4 cut(s) 79, 949, 1201, 1426
BstFNI CGCG 1 cut(s) 309
BstHHI GCGC 2 cut(s) 309, 487
BstKTI GATC 6 cut(s) 18, 603, 660, 972, 1314, 1507
BstMAI GTCTC 3 cut(s) 638, 692, 1049
BstMBI GATC 6 cut(s) 15, 600, 657, 969, 1311, 1504
BstMWI GCNNNNNNNGC 7 cut(s) 38, 154, 185, 323, 482, 902, 1598
BstNI CCWGG 1 cut(s) 1279
BstNSI RCATGY 3 cut(s) 41, 57, 1438
BstPAI GACNNNNGTC 1 cut(s) 251
BstSCI CCNGG 2 cut(s) 1277, 1596
BstSFI CTRYAG 5 cut(s) 58, 172, 189, 291, 906
BstSLI GKGCMC 1 cut(s) 181
BstUI CGCG 1 cut(s) 309
BstV1I GCAGC 8 cut(s) 44, 175, 213, 724, 1162, 1211, 1286, 1521
BstV2I GAAGAC 1 cut(s) 542
BstX2I RGATCY 1 cut(s) 1504
BstYI RGATCY 1 cut(s) 1504
Bsu15I ATCGAT 1 cut(s) 603
BsuI GTATCC 1 cut(s) 120
BsuRI GGCC 7 cut(s) 22, 563, 701, 896, 987, 1325, 1715
BsuTUI ATCGAT 1 cut(s) 603
BtgI CCRYGG 1 cut(s) 702
BtgZI GCGATG 1 cut(s) 1552
BtrI CACGTC 1 cut(s) 1181
BtsCI GGATG 4 cut(s) 79, 949, 1201, 1426
BtsI GCAGTG 2 cut(s) 360, 972
BtsIMutI CAGTG 3 cut(s) 179, 360, 972
BveI ACCTGC 1 cut(s) 196
Cac8I GCNNGC 8 cut(s) 55, 203, 483, 568, 1432, 1436, 1594, 1759
CaiI CAGNNNCTG 3 cut(s) 638, 1009, 1025
CciI TCATGA 4 cut(s) 90, 966, 1338, 1495
CfoI GCGC 2 cut(s) 309, 487
Cfr10I RCCGGY 1 cut(s) 771
Cfr13I GGNCC 4 cut(s) 21, 777, 985, 1323
ClaI ATCGAT 1 cut(s) 603
Csp6I GTAC 2 cut(s) 35, 1293
CspAI ACCGGT 1 cut(s) 771
CviQI GTAC 2 cut(s) 35, 1293
DdeI CTNAG 6 cut(s) 144, 689, 741, 1404, 1508, 1581
DpnI GATC 6 cut(s) 17, 602, 659, 971, 1313, 1506
DpnII GATC 6 cut(s) 15, 600, 657, 969, 1311, 1504
DraIII CACNNNGTG 1 cut(s) 1184
EaeI YGGCCR 3 cut(s) 561, 699, 1713
Eam1104I CTCTTC 2 cut(s) 294, 675
EarI CTCTTC 2 cut(s) 294, 675
Eco130I CCWWGG 3 cut(s) 571, 702, 781
Eco147I AGGCCT 1 cut(s) 896
Eco24I GRGCYC 1 cut(s) 1456
Eco47I GGWCC 1 cut(s) 777
Eco57I CTGAAG 1 cut(s) 119
Eco88I CYCGRG 1 cut(s) 1455
EcoRII CCWGG 1 cut(s) 1277
EcoT14I CCWWGG 3 cut(s) 571, 702, 781
EcoT38I GRGCYC 1 cut(s) 1456
ErhI CCWWGG 3 cut(s) 571, 702, 781
FaqI GGGAC 4 cut(s) 296, 763, 1202, 1223
FauI CCCGC 2 cut(s) 575, 1472
FbaI TGATCA 1 cut(s) 969
FblI GTMKAC 1 cut(s) 168
Fnu4HI GCNGC 9 cut(s) 58, 189, 227, 564, 738, 1176, 1200, 1275, 1535
FokI GGATG 4 cut(s) 86, 956, 1208, 1433
FriOI GRGCYC 1 cut(s) 1456
Fsp4HI GCNGC 9 cut(s) 58, 189, 227, 564, 738, 1176, 1200, 1275, 1535
FspBI CTAG 3 cut(s) 372, 1331, 1593
GlaI GCGC 2 cut(s) 308, 486
GluI GCNGC 9 cut(s) 58, 189, 227, 564, 738, 1176, 1200, 1275, 1535
GsaI CCCAGC 2 cut(s) 269, 1152
GsuI CTGGAG 1 cut(s) 1665
HaeIII GGCC 7 cut(s) 22, 563, 701, 896, 987, 1325, 1715
HapII CCGG 3 cut(s) 19, 772, 1598
HhaI GCGC 2 cut(s) 309, 487
Hin6I GCGC 2 cut(s) 307, 485
HinP1I GCGC 2 cut(s) 307, 485
HincII GTYRAC 3 cut(s) 82, 169, 1212
HindII GTYRAC 3 cut(s) 82, 169, 1212
HinfI GANTC 6 cut(s) 512, 605, 635, 816, 914, 1414
HpaI GTTAAC 1 cut(s) 1212
HpaII CCGG 3 cut(s) 19, 772, 1598
HphI GGTGA 6 cut(s) 653, 896, 1064, 1120, 1597, 1738
Hpy166II GTNNAC 5 cut(s) 82, 169, 179, 1212, 1304
Hpy188I TCNGA 4 cut(s) 10, 692, 1509, 1557
Hpy8I GTNNAC 5 cut(s) 82, 169, 179, 1212, 1304
Hpy99I CGWCG 1 cut(s) 1185
HpyAV CCTTC 6 cut(s) 159, 599, 1099, 1277, 1520, 1691
HpyCH4III ACNGT 3 cut(s) 173, 217, 1091
HpyCH4IV ACGT 3 cut(s) 990, 1180, 1447
HpyF10VI GCNNNNNNNGC 7 cut(s) 38, 154, 185, 323, 482, 902, 1598
HpyF3I CTNAG 6 cut(s) 144, 689, 741, 1404, 1508, 1581
HpySE526I ACGT 3 cut(s) 990, 1180, 1447
HspAI GCGC 2 cut(s) 307, 485
KpnI GGTACC 1 cut(s) 1296
Ksp22I TGATCA 1 cut(s) 969
KspAI GTTAAC 1 cut(s) 1212
Kzo9I GATC 6 cut(s) 15, 600, 657, 969, 1311, 1504
LmnI GCTCC 5 cut(s) 269, 399, 473, 1022, 1620
Lsp1109I GCAGC 8 cut(s) 44, 175, 213, 724, 1162, 1211, 1286, 1521
LweI GCATC 5 cut(s) 97, 1101, 1186, 1390, 1630
MaeI CTAG 3 cut(s) 372, 1331, 1593
MaeII ACGT 3 cut(s) 990, 1180, 1447
MaeIII GTNAC 6 cut(s) 763, 1091, 1223, 1253, 1660, 1744
MalI GATC 6 cut(s) 17, 602, 659, 971, 1313, 1506
MboI GATC 6 cut(s) 15, 600, 657, 969, 1311, 1504
MboII GAAGA 4 cut(s) 311, 444, 547, 692
MfeI CAATTG 1 cut(s) 756
MflI RGATCY 1 cut(s) 1504
MhlI GDGCHC 2 cut(s) 181, 1456
MlsI TGGCCA 1 cut(s) 701
MluCI AATT 4 cut(s) 756, 923, 1062, 1118
MluNI TGGCCA 1 cut(s) 701
MlyI GAGTC 1 cut(s) 629
Mox20I TGGCCA 1 cut(s) 701
MscI TGGCCA 1 cut(s) 701
MseI TTAA 3 cut(s) 522, 1079, 1211
MslI CAYNNNNRTG 5 cut(s) 89, 162, 277, 498, 1439
Msp20I TGGCCA 1 cut(s) 701
MspI CCGG 3 cut(s) 19, 772, 1598
MspR9I CCNGG 2 cut(s) 1279, 1598
MunI CAATTG 1 cut(s) 756
Mva1269I GAATGC 2 cut(s) 998, 1348
MvaI CCWGG 1 cut(s) 1279
MvnI CGCG 1 cut(s) 309
MwoI GCNNNNNNNGC 7 cut(s) 38, 154, 185, 323, 482, 902, 1598
NciI CCSGG 1 cut(s) 1598
NcoI CCATGG 1 cut(s) 702
NdeII GATC 6 cut(s) 15, 600, 657, 969, 1311, 1504
NheI GCTAGC 1 cut(s) 1592
NlaIV GGNNCC 5 cut(s) 23, 502, 779, 1294, 1324
NmeAIII GCCGAG 2 cut(s) 1598, 1741
NmuCI GTSAC 4 cut(s) 763, 1091, 1660, 1744
NspI RCATGY 3 cut(s) 41, 57, 1438
PaeI GCATGC 2 cut(s) 57, 1438
PagI TCATGA 4 cut(s) 90, 966, 1338, 1495
PceI AGGCCT 1 cut(s) 896
PctI GAATGC 2 cut(s) 998, 1348
PfeI GAWTC 5 cut(s) 512, 605, 816, 914, 1414
PflMI CCANNNNNTGG 2 cut(s) 345, 1009
PinAI ACCGGT 1 cut(s) 771
PkrI GCNGC 9 cut(s) 59, 190, 228, 565, 739, 1177, 1201, 1276, 1536
PleI GAGTC 1 cut(s) 629
PpsI GAGTC 1 cut(s) 629
Ppu21I YACGTR 1 cut(s) 1448
PshAI GACNNNNGTC 1 cut(s) 251
Psp6I CCWGG 1 cut(s) 1277
PspFI CCCAGC 2 cut(s) 265, 1148
PspGI CCWGG 1 cut(s) 1277
PspN4I GGNNCC 5 cut(s) 23, 502, 779, 1294, 1324
PspPI GGNCC 4 cut(s) 21, 777, 985, 1323
PstI CTGCAG 2 cut(s) 62, 193
PstNI CAGNNNCTG 3 cut(s) 638, 1009, 1025
PsuI RGATCY 1 cut(s) 1504
RsaI GTAC 2 cut(s) 36, 1294
RsaNI GTAC 2 cut(s) 35, 1293
RseI CAYNNNNRTG 5 cut(s) 89, 162, 277, 498, 1439
SalI GTCGAC 1 cut(s) 167
SaqAI TTAA 3 cut(s) 522, 1079, 1211
SatI GCNGC 9 cut(s) 58, 189, 227, 564, 738, 1176, 1200, 1275, 1535
Sau3AI GATC 6 cut(s) 15, 600, 657, 969, 1311, 1504
Sau96I GGNCC 4 cut(s) 21, 777, 985, 1323
SchI GAGTC 1 cut(s) 629
ScrFI CCNGG 2 cut(s) 1279, 1598
SduI GDGCHC 2 cut(s) 181, 1456
SfaNI GCATC 5 cut(s) 97, 1101, 1186, 1390, 1630
SfcI CTRYAG 5 cut(s) 58, 172, 189, 291, 906
SinI GGWCC 1 cut(s) 777
SmiMI CAYNNNNRTG 5 cut(s) 89, 162, 277, 498, 1439
SmlI CTYRAG 2 cut(s) 876, 1463
SmoI CTYRAG 2 cut(s) 876, 1463
SphI GCATGC 2 cut(s) 57, 1438
Sse9I AATT 4 cut(s) 756, 923, 1062, 1118
SseBI AGGCCT 1 cut(s) 896
SsiI CCGC 4 cut(s) 429, 564, 568, 1479
SspI AATATT 1 cut(s) 406
SspMI CTAG 3 cut(s) 372, 1331, 1593
StuI AGGCCT 1 cut(s) 896
StyD4I CCNGG 2 cut(s) 1277, 1596
StyI CCWWGG 3 cut(s) 571, 702, 781
TaaI ACNGT 3 cut(s) 173, 217, 1091
TaiI ACGT 3 cut(s) 993, 1183, 1450
TaqI TCGA 6 cut(s) 105, 120, 168, 603, 1101, 1128
TasI AATT 4 cut(s) 756, 923, 1062, 1118
TatI WGTACW 1 cut(s) 34
TauI GCSGC 1 cut(s) 566
TfiI GAWTC 5 cut(s) 512, 605, 816, 914, 1414
Tru1I TTAA 3 cut(s) 522, 1079, 1211
Tru9I TTAA 3 cut(s) 522, 1079, 1211
TscAI CASTG 3 cut(s) 186, 360, 979
TseFI GTSAC 4 cut(s) 763, 1091, 1660, 1744
TseI GCWGC 8 cut(s) 57, 188, 226, 737, 1175, 1199, 1274, 1534
Tsp45I GTSAC 4 cut(s) 763, 1091, 1660, 1744
TspDTI ATGAA 4 cut(s) 107, 693, 1355, 1437
TspGWI ACGGA 1 cut(s) 209
TspRI CASTG 3 cut(s) 186, 360, 979
Van91I CCANNNNNTGG 2 cut(s) 345, 1009
VneI GTGCAC 1 cut(s) 177
VpaK11BI GGWCC 1 cut(s) 777
XapI RAATTY 2 cut(s) 923, 1118
XceI RCATGY 3 cut(s) 41, 57, 1438
XmiI GTMKAC 1 cut(s) 168
XspI CTAG 3 cut(s) 372, 1331, 1593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.