Rh2BG672600

Ankyrin repeats (many copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0002610
Physical Location & Seq
Reverse (-)
88379928 .. 88384189
4262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG672600.1

Sequence Viewer

Length: 2004 bp
ATGACGGTTTTCTCCAGCAAACAGGTGTTCCCGGTGGACTGCGAGGCCGAGAGCATTGGAGCTGATGTAAATCAGAAGCTCTTCCGTGGCTTCGCGACAACAGCAGCAGTAAGAGAGGGCCATCTTGAGATTCTCGAGATCCTACTTAAAGCTGGAGCATCTCAACCAGCTTGTGAGGAAGCTCTGTTGGAGGCAAGTTGTCATGGAAATGCTAAAAACGTGGAGCTGCTCATGTCCTCTGATTTGATCCGGCCCCATCTTGCTGTACATGCTATTGTCATAGCATGCTGCAGGGGGTTTGTGGATGTGGTTGACACTCTCATGAAGTGTGGTGTCGATGCAAGTGCAGTCGATAGGATACTGCTTCAGTCATCTAAGCCTTCTCTGCACACCAACGTCGACTGTAGTGCACTGGTAGCTGCAGTTGTTAGCAGGCAGGTTGCTACTGTCCGTTTGCTGCTAAAGGCTGGTGCAAGGACAGATGTCCAAGTGAGGCTGGGAGCATGGTCATGGGACATAGCTACAGGGGAAGAGTTGCGCGTTGGTGCAGGACTGGCTGAACCTTATCCCATTACTTGGTGTGCAGTGGAATACTTTGAAGCTAGTGGTTCAATCTTGCACTTGCTCCTCCAAAATATTTCCCCTAATACCCCTTATTGTGGAAGAACTCTCCTGCACCATGCCGTCCTATGTGGCAATGTAGGAGCTGTGCGTGCGCTACTACATTGTGGTGCCAATGTAGAATCGCCTGTTAAAACAACTGGGAAGACAATGTTCAATGCAATACACATGGCTGCCCGCCTTGGTTTGTCAGCAGTCCTTCAATGTTTGATTGATTCTGGTTGTGATATAAACTCCAAGACAGACTCTGGTGAGACAGCTCTAACGATCAGTGCAAAATATAAACATGAAGAGTGTCTCAGAGTATTGGCCATGGCTGGTGCTGATTTTGGCTTGGTCAATGTTGCTGCTCAGTCTGTCAGTTCAATTGCTGTCACAAACCGGTGGTCCCTTGGTTTTCAGGAGGCGTTGGTAGATATAATAAGAATCGGCAAGATACCTAAATCCAGCAACTTTTCTGTTTTCTCTCCCCTGATGTTTGTCGCTCAAGCTGGTGATATTGAGGCCTTGAAAGCTATAGTTGATTCAGGAGAATTTGAGATTGATTATCAGGATGATAAAGGTTTTAGTCCAGTCATGATCACTGCTTTGGAGGGTCACGTTGAAGCATTCCAGTTGCTGGTTTATGCAGGAGCTGATGTAAAGTTGTGCAACAAATCTGGTGAGACTGCAATTACTCTATCAGCATTAAGCCAAAACCGTGACCTATTTGAGAAGGTGATGCTTGAATTTGCACTCGAAAAGGGTAATCGCTATGCTGGGGGTTTCTATGCTCTACATTGTGCTGCACGTCGTGGGGACATGGATGCAGCCAAGTTGTTAACAGGTAGGGGTTACGATGTAAATGTCCCTGATGGAGATGGTTACACACCTCTCATGTTAGCAGCCAGGGAAGGCTATGGTACCATGTGTGAACTCTTGATCTCTCATGGGGCCAAGCTAGAGGTCATGAATGCTAAAGGCGAAACGCCACTCTCACTTGCGAGCAAAAGGGGTGGTTTGAAAAATGATGCTGAGCGTGTGATTCTGGATGAACTTGCTCGCAAGCTGGTGCTACGTGGGGCTCGGGTTCTCAAGCACACAAAGGGCGGGAAAGGAAGTCCTCATGAGAAAGATCTGAGAATGGTGGGGAGTGAAGGGGTGCTGCGATGGGGCAAGTCAAATCAGAGAAATGTGATATGCCGAGACGCTGAGGTGAGAGCTAGCCCGGCTTTTATCAGGAACAGGGGGAGCAAGAGTGATGTCAATGATGCTGGAGTGTTTAGGGTTGTGACTACCAAAAACAAGGAGGTGCACTTTGTGTGCGAAGGTGGGGTTGAAATGGCCGAGCTTTGGGTGAGGGGTATAACACTTGTGACCAAAGAGGCTGGCTATTTTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000902 GO:0000904 GO:0000910 GO:0001508 GO:0002028 GO:0003008 GO:0003254 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006888 GO:0006892 GO:0006893 GO:0006996 GO:0007009 GO:0007010 GO:0007016 GO:0007049 GO:0007154 GO:0007275 GO:0007399 GO:0007409 GO:0007528 GO:0008092 GO:0008104 GO:0008150 GO:0009653 GO:0009893 GO:0009986 GO:0009987 GO:0010035 GO:0010038 GO:0010256 GO:0010468 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010649 GO:0010650 GO:0010765 GO:0010959 GO:0010960 GO:0012505 GO:0014704 GO:0014731 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0016328 GO:0016528 GO:0016529 GO:0019222 GO:0019226 GO:0019228 GO:0022008 GO:0022402 GO:0022407 GO:0022409 GO:0022607 GO:0022898 GO:0023052 GO:0030016 GO:0030017 GO:0030018 GO:0030030 GO:0030054 GO:0030154 GO:0030155 GO:0030182 GO:0030315 GO:0030424 GO:0030425 GO:0030507 GO:0030674 GO:0031175 GO:0031594 GO:0031674 GO:0032026 GO:0032386 GO:0032388 GO:0032409 GO:0032410 GO:0032411 GO:0032412 GO:0032413 GO:0032414 GO:0032501 GO:0032502 GO:0032507 GO:0032879 GO:0032880 GO:0032989 GO:0032990 GO:0033036 GO:0033157 GO:0033267 GO:0033268 GO:0034110 GO:0034112 GO:0034613 GO:0034762 GO:0034763 GO:0034764 GO:0034765 GO:0034766 GO:0034767 GO:0035637 GO:0036477 GO:0042221 GO:0042383 GO:0042391 GO:0042592 GO:0042886 GO:0042995 GO:0043001 GO:0043005 GO:0043034 GO:0043194 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043266 GO:0043267 GO:0043269 GO:0043270 GO:0043271 GO:0043292 GO:0044085 GO:0044091 GO:0044092 GO:0044093 GO:0044291 GO:0044304 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044456 GO:0044459 GO:0044463 GO:0044464 GO:0045184 GO:0045185 GO:0045202 GO:0045211 GO:0045296 GO:0045760 GO:0045785 GO:0045838 GO:0046907 GO:0048193 GO:0048468 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050808 GO:0050839 GO:0050877 GO:0050896 GO:0051049 GO:0051050 GO:0051051 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051235 GO:0051301 GO:0051641 GO:0051649 GO:0051651 GO:0051716 GO:0055065 GO:0055080 GO:0060090 GO:0060255 GO:0060341 GO:0061024 GO:0061564 GO:0061640 GO:0061951 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071286 GO:0071702 GO:0071705 GO:0071709 GO:0071840 GO:0071944 GO:0072507 GO:0072657 GO:0072658 GO:0072659 GO:0072660 GO:0090087 GO:0090150 GO:0090313 GO:0090314 GO:0090316 GO:0097060 GO:0097447 GO:0097458 GO:0098590 GO:0098771 GO:0098794 GO:0098876 GO:0098900 GO:0098901 GO:0098902 GO:0099080 GO:0099081 GO:0099512 GO:0120025 GO:0120036 GO:0120038 GO:0120039 GO:1900825 GO:1900827 GO:1901016 GO:1901017 GO:1901379 GO:1901380 GO:1902259 GO:1902260 GO:1902305 GO:1902307 GO:1903047 GO:1903533 GO:1903817 GO:1903827 GO:1903829 GO:1904062 GO:1904063 GO:1904064 GO:1904181 GO:1904951 GO:1905475 GO:1905477 GO:1990778 GO:2000649 GO:2000651 GO:2001257 GO:2001258 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_3

Protein Analysis

667

Amino Acids

71.71

Weight (kDa)

6.51

Isoelectric Point (pI)

29.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 260 - 318 4e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 365 - 445 2.5e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 400 - 492 2e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 466 - 539 3.4e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 466 - 515 7.6e-09 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 427
Acc65I GGTACC 1 cut(s) 1523
AccB1I GGYRCC 2 cut(s) 731, 1523
AccB7I CCANNNNNTGG 2 cut(s) 576, 1240
AccI GTMKAC 1 cut(s) 399
AccII CGCG 2 cut(s) 95, 540
AciI CCGC 2 cut(s) 799, 1710
AclWI GGATC 2 cut(s) 133, 241
AcoI YGGCCR 2 cut(s) 930, 1944
AcsI RAATTY 2 cut(s) 1154, 1349
AcuI CTGAAG 1 cut(s) 350
AdeI CACNNNGTG 2 cut(s) 1415, 1921
AfaI GTAC 2 cut(s) 267, 1525
AfiI CCNNNNNNNGG 4 cut(s) 576, 659, 1240, 1953
AgeI ACCGGT 1 cut(s) 1002
AjiI CACGTC 1 cut(s) 1412
AjnI CCWGG 1 cut(s) 1508
Alw21I GWGCWC 2 cut(s) 412, 1917
Alw26I GTCTC 4 cut(s) 869, 923, 1280, 1800
Alw44I GTGCAC 2 cut(s) 408, 1913
AlwI GGATC 2 cut(s) 133, 241
AlwNI CAGNNNCTG 3 cut(s) 869, 1240, 1256
Ama87I CYCGRG 2 cut(s) 134, 1686
AoxI GGCC 7 cut(s) 45, 118, 251, 930, 1125, 1554, 1944
ApaLI GTGCAC 2 cut(s) 408, 1913
ApoI RAATTY 2 cut(s) 1154, 1349
ArsI GACNNNNNNTTYG 2 cut(s) 992, 1024
AsiGI ACCGGT 1 cut(s) 1002
Asp700I GAANNNNTTC 1 cut(s) 80
Asp718I GGTACC 1 cut(s) 1523
AspLEI GCGC 2 cut(s) 540, 718
AspS9I GGNCC 4 cut(s) 118, 252, 1008, 1554
AsuC2I CCSGG 2 cut(s) 32, 1829
AsuHPI GGTGA 6 cut(s) 884, 1127, 1295, 1351, 1828, 1969
AsuNHI GCTAGC 1 cut(s) 1823
AvaI CYCGRG 2 cut(s) 134, 1686
AvaII GGWCC 1 cut(s) 1008
BaeGI GKGCMC 2 cut(s) 412, 1917
BalI TGGCCA 1 cut(s) 932
BanI GGYRCC 2 cut(s) 731, 1523
BanII GRGCYC 1 cut(s) 1687
BbsI GAAGAC 1 cut(s) 773
Bbv12I GWGCWC 2 cut(s) 412, 1917
BbvCI CCTCAGC 1 cut(s) 1812
BccI CCATC 5 cut(s) 129, 264, 1469, 1475, 1764
BceAI ACGGC 1 cut(s) 668
BcgI CGANNNNNNTGC 4 cut(s) 326, 360, 389, 423
BciT130I CCWGG 1 cut(s) 1510
BciVI GTATCC 1 cut(s) 351
BclI TGATCA 1 cut(s) 1200
BcnI CCSGG 2 cut(s) 32, 1829
BcoDI GTCTC 4 cut(s) 869, 923, 1280, 1800
BfaI CTAG 3 cut(s) 603, 1562, 1824
BfmI CTRYAG 5 cut(s) 289, 403, 420, 522, 1137
BfuAI ACCTGC 1 cut(s) 427
BfuI GTATCC 1 cut(s) 351
BglII AGATCT 1 cut(s) 1735
BlpI GCTNAGC 1 cut(s) 1635
Bme1390I CCNGG 3 cut(s) 32, 1510, 1829
Bme18I GGWCC 1 cut(s) 1008
BmeT110I CYCGRG 2 cut(s) 134, 1686
BmgBI CACGTC 1 cut(s) 1412
BmgT120I GGNCC 4 cut(s) 118, 252, 1008, 1554
BmiI GGNNCC 5 cut(s) 254, 733, 1010, 1525, 1555
BmrFI CCNGG 3 cut(s) 32, 1510, 1829
BmrI ACTGGG 1 cut(s) 771
BmsI GCATC 6 cut(s) 167, 328, 1332, 1417, 1621, 1861
BmtI GCTAGC 1 cut(s) 1827
BmuI ACTGGG 1 cut(s) 771
BoxI GACNNNNGTC 1 cut(s) 482
BpiI GAAGAC 1 cut(s) 773
BpmI CTGGAG 2 cut(s) 174, 1896
Bpu10I CCTNAGC 1 cut(s) 1812
Bpu1102I GCTNAGC 1 cut(s) 1635
BpuEI CTTGAG 3 cut(s) 146, 1092, 1679
BpuMI CCSGG 2 cut(s) 32, 1829
BsaAI YACGTR 1 cut(s) 1679
BsaBI GATNNNNATC 1 cut(s) 69
BsaJI CCNNGG 5 cut(s) 85, 802, 933, 1012, 1509
BsaWI WCCGGW 1 cut(s) 1002
BsaXI ACNNNNNCTCC 6 cut(s) 51, 81, 1245, 1275, 1843, 1873
Bsc4I CCNNNNNNNGG 4 cut(s) 576, 659, 1240, 1953
Bse118I RCCGGY 1 cut(s) 1002
Bse1I ACTGG 5 cut(s) 417, 558, 766, 1193, 1234
Bse3DI GCAATG 1 cut(s) 703
Bse8I GATNNNNATC 1 cut(s) 69
BseBI CCWGG 1 cut(s) 1510
BseDI CCNNGG 5 cut(s) 85, 802, 933, 1012, 1509
BseGI GGATG 4 cut(s) 310, 1180, 1432, 1657
BseJI GATNNNNATC 1 cut(s) 69
BseLI CCNNNNNNNGG 4 cut(s) 576, 659, 1240, 1953
BseMI GCAATG 1 cut(s) 703
BseMII CTCAG 5 cut(s) 934, 986, 1626, 1730, 1803
BseNI ACTGG 5 cut(s) 417, 558, 766, 1193, 1234
BseRI GAGGAG 1 cut(s) 617
BseSI GKGCMC 2 cut(s) 412, 1917
BseYI CCCAGC 2 cut(s) 496, 1379
BsgI GTGCAG 6 cut(s) 366, 371, 567, 603, 659, 1392
Bsh1236I CGCG 2 cut(s) 95, 540
BshFI GGCC 7 cut(s) 47, 120, 253, 932, 1127, 1556, 1946
BshNI GGYRCC 2 cut(s) 731, 1523
BshTI ACCGGT 1 cut(s) 1002
BsiHKAI GWGCWC 2 cut(s) 412, 1917
BsiHKCI CYCGRG 2 cut(s) 134, 1686
BsiSI CCGG 4 cut(s) 32, 250, 1003, 1829
BslFI GGGAC 4 cut(s) 527, 994, 1433, 1454
BslI CCNNNNNNNGG 4 cut(s) 576, 659, 1240, 1953
BsmAI GTCTC 4 cut(s) 869, 923, 1280, 1800
BsmBI CGTCTC 1 cut(s) 1800
BsmFI GGGAC 4 cut(s) 527, 994, 1433, 1454
BsmI GAATGC 2 cut(s) 1229, 1579
BsnI GGCC 7 cut(s) 47, 120, 253, 932, 1127, 1556, 1946
BsoBI CYCGRG 2 cut(s) 134, 1686
Bsp1286I GDGCHC 3 cut(s) 412, 1687, 1917
Bsp1407I TGTACA 1 cut(s) 265
Bsp143I GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
Bsp1720I GCTNAGC 1 cut(s) 1635
Bsp19I CCATGG 1 cut(s) 933
Bsp68I TCGCGA 1 cut(s) 95
BspACI CCGC 2 cut(s) 799, 1710
BspANI GGCC 7 cut(s) 47, 120, 253, 932, 1127, 1556, 1946
BspCNI CTCAG 5 cut(s) 933, 985, 1627, 1731, 1804
BspFNI CGCG 2 cut(s) 95, 540
BspHI TCATGA 4 cut(s) 321, 1197, 1569, 1726
BspLI GGNNCC 5 cut(s) 254, 733, 1010, 1525, 1555
BspMAI CTGCAG 2 cut(s) 293, 424
BspMI ACCTGC 1 cut(s) 427
BspOI GCTAGC 1 cut(s) 1827
BspPI GGATC 2 cut(s) 133, 241
BspQI GCTCTTC 1 cut(s) 86
BspT107I GGYRCC 2 cut(s) 731, 1523
BsrDI GCAATG 1 cut(s) 703
BsrFI RCCGGY 1 cut(s) 1002
BsrGI TGTACA 1 cut(s) 265
BsrI ACTGG 5 cut(s) 417, 558, 766, 1193, 1234
BssAI RCCGGY 1 cut(s) 1002
BssECI CCNNGG 5 cut(s) 85, 802, 933, 1012, 1509
BssMI GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
BssT1I CCWWGG 3 cut(s) 802, 933, 1012
Bst2UI CCWGG 1 cut(s) 1510
Bst4CI ACNGT 4 cut(s) 7, 404, 448, 1322
Bst6I CTCTTC 3 cut(s) 86, 525, 906
BstAUI TGTACA 1 cut(s) 265
BstBAI YACGTR 1 cut(s) 1679
BstC8I GCNNGC 9 cut(s) 286, 434, 714, 799, 1606, 1663, 1667, 1825, 1990
BstDEI CTNAG 6 cut(s) 375, 920, 972, 1635, 1739, 1812
BstDSI CCRYGG 2 cut(s) 85, 933
BstF5I GGATG 4 cut(s) 310, 1180, 1432, 1657
BstFNI CGCG 2 cut(s) 95, 540
BstHHI GCGC 2 cut(s) 540, 718
BstKTI GATC 6 cut(s) 141, 249, 891, 1203, 1545, 1738
BstMAI GTCTC 4 cut(s) 869, 923, 1280, 1800
BstMBI GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
BstMWI GCNNNNNNNGC 8 cut(s) 101, 269, 385, 416, 554, 713, 1133, 1829
BstNI CCWGG 1 cut(s) 1510
BstNSI RCATGY 2 cut(s) 272, 288
BstPAI GACNNNNGTC 1 cut(s) 482
BstSCI CCNGG 3 cut(s) 30, 1508, 1827
BstSFI CTRYAG 5 cut(s) 289, 403, 420, 522, 1137
BstSLI GKGCMC 2 cut(s) 412, 1917
BstUI CGCG 2 cut(s) 95, 540
BstV2I GAAGAC 1 cut(s) 773
BstX2I RGATCY 2 cut(s) 138, 1735
BstYI RGATCY 2 cut(s) 138, 1735
BsuI GTATCC 1 cut(s) 351
BsuRI GGCC 7 cut(s) 47, 120, 253, 932, 1127, 1556, 1946
BtgI CCRYGG 2 cut(s) 85, 933
BtgZI GCGATG 1 cut(s) 1783
BtrI CACGTC 1 cut(s) 1412
BtsCI GGATG 4 cut(s) 310, 1180, 1432, 1657
BtsI GCAGTG 2 cut(s) 591, 1203
BtsIMutI CAGTG 4 cut(s) 410, 591, 898, 1203
BtuMI TCGCGA 1 cut(s) 95
BveI ACCTGC 1 cut(s) 427
Cac8I GCNNGC 9 cut(s) 286, 434, 714, 799, 1606, 1663, 1667, 1825, 1990
CaiI CAGNNNCTG 3 cut(s) 869, 1240, 1256
CciI TCATGA 4 cut(s) 321, 1197, 1569, 1726
CfoI GCGC 2 cut(s) 540, 718
Cfr10I RCCGGY 1 cut(s) 1002
Cfr13I GGNCC 4 cut(s) 118, 252, 1008, 1554
CseI GACGC 1 cut(s) 1817
Csp6I GTAC 2 cut(s) 266, 1524
CspAI ACCGGT 1 cut(s) 1002
CspCI CAANNNNNGTGG 2 cut(s) 1597, 1632
CviQI GTAC 2 cut(s) 266, 1524
DdeI CTNAG 6 cut(s) 375, 920, 972, 1635, 1739, 1812
DpnI GATC 6 cut(s) 140, 248, 890, 1202, 1544, 1737
DpnII GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
DraIII CACNNNGTG 2 cut(s) 1415, 1921
EaeI YGGCCR 2 cut(s) 930, 1944
Eam1104I CTCTTC 3 cut(s) 86, 525, 906
EarI CTCTTC 3 cut(s) 86, 525, 906
Eco130I CCWWGG 3 cut(s) 802, 933, 1012
Eco147I AGGCCT 1 cut(s) 1127
Eco24I GRGCYC 1 cut(s) 1687
Eco47I GGWCC 1 cut(s) 1008
Eco57I CTGAAG 1 cut(s) 350
Eco88I CYCGRG 2 cut(s) 134, 1686
EcoRII CCWGG 1 cut(s) 1508
EcoT14I CCWWGG 3 cut(s) 802, 933, 1012
EcoT38I GRGCYC 1 cut(s) 1687
ErhI CCWWGG 3 cut(s) 802, 933, 1012
Esp3I CGTCTC 1 cut(s) 1800
FaqI GGGAC 4 cut(s) 527, 994, 1433, 1454
FauI CCCGC 2 cut(s) 806, 1703
FbaI TGATCA 1 cut(s) 1200
FblI GTMKAC 1 cut(s) 399
FokI GGATG 4 cut(s) 317, 1187, 1439, 1664
FriOI GRGCYC 1 cut(s) 1687
FspBI CTAG 3 cut(s) 603, 1562, 1824
GlaI GCGC 2 cut(s) 539, 717
GsaI CCCAGC 2 cut(s) 500, 1383
GsuI CTGGAG 2 cut(s) 174, 1896
HaeIII GGCC 7 cut(s) 47, 120, 253, 932, 1127, 1556, 1946
HapII CCGG 4 cut(s) 32, 250, 1003, 1829
HgaI GACGC 1 cut(s) 1817
HhaI GCGC 2 cut(s) 540, 718
Hin6I GCGC 2 cut(s) 538, 716
HinP1I GCGC 2 cut(s) 538, 716
HincII GTYRAC 3 cut(s) 313, 400, 1443
HindII GTYRAC 3 cut(s) 313, 400, 1443
HinfI GANTC 7 cut(s) 130, 743, 836, 866, 1047, 1145, 1645
HpaI GTTAAC 1 cut(s) 1443
HpaII CCGG 4 cut(s) 32, 250, 1003, 1829
HphI GGTGA 6 cut(s) 884, 1127, 1295, 1351, 1828, 1969
Hpy166II GTNNAC 7 cut(s) 37, 313, 400, 410, 1443, 1535, 1915
Hpy188I TCNGA 5 cut(s) 75, 241, 923, 1740, 1788
Hpy8I GTNNAC 7 cut(s) 37, 313, 400, 410, 1443, 1535, 1915
Hpy99I CGWCG 2 cut(s) 401, 1416
HpyAV CCTTC 6 cut(s) 390, 830, 1330, 1508, 1751, 1922
HpyCH4III ACNGT 4 cut(s) 7, 404, 448, 1322
HpyCH4IV ACGT 5 cut(s) 219, 396, 1221, 1411, 1678
HpyF10VI GCNNNNNNNGC 8 cut(s) 101, 269, 385, 416, 554, 713, 1133, 1829
HpyF3I CTNAG 6 cut(s) 375, 920, 972, 1635, 1739, 1812
HpySE526I ACGT 5 cut(s) 219, 396, 1221, 1411, 1678
HspAI GCGC 2 cut(s) 538, 716
KpnI GGTACC 1 cut(s) 1527
Ksp22I TGATCA 1 cut(s) 1200
KspAI GTTAAC 1 cut(s) 1443
Kzo9I GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
LguI GCTCTTC 1 cut(s) 86
LmnI GCTCC 8 cut(s) 59, 155, 223, 500, 630, 704, 1253, 1851
LweI GCATC 6 cut(s) 167, 328, 1332, 1417, 1621, 1861
MaeI CTAG 3 cut(s) 603, 1562, 1824
MaeII ACGT 5 cut(s) 219, 396, 1221, 1411, 1678
MaeIII GTNAC 7 cut(s) 994, 1217, 1322, 1454, 1484, 1891, 1975
MalI GATC 6 cut(s) 140, 248, 890, 1202, 1544, 1737
MboI GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
MboII GAAGA 5 cut(s) 73, 542, 675, 778, 923
MfeI CAATTG 1 cut(s) 987
MflI RGATCY 2 cut(s) 138, 1735
MhlI GDGCHC 3 cut(s) 412, 1687, 1917
MlsI TGGCCA 1 cut(s) 932
MluCI AATT 4 cut(s) 987, 1154, 1293, 1349
MluNI TGGCCA 1 cut(s) 932
MlyI GAGTC 1 cut(s) 860
MmeI TCCRAC 1 cut(s) 168
Mox20I TGGCCA 1 cut(s) 932
MroXI GAANNNNTTC 1 cut(s) 80
MscI TGGCCA 1 cut(s) 932
MseI TTAA 4 cut(s) 147, 753, 1310, 1442
MslI CAYNNNNRTG 4 cut(s) 207, 320, 508, 729
Msp20I TGGCCA 1 cut(s) 932
MspI CCGG 4 cut(s) 32, 250, 1003, 1829
MspR9I CCNGG 3 cut(s) 32, 1510, 1829
MunI CAATTG 1 cut(s) 987
Mva1269I GAATGC 2 cut(s) 1229, 1579
MvaI CCWGG 1 cut(s) 1510
MvnI CGCG 2 cut(s) 95, 540
MwoI GCNNNNNNNGC 8 cut(s) 101, 269, 385, 416, 554, 713, 1133, 1829
NciI CCSGG 2 cut(s) 32, 1829
NcoI CCATGG 1 cut(s) 933
NdeII GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
NheI GCTAGC 1 cut(s) 1823
NlaIV GGNNCC 5 cut(s) 254, 733, 1010, 1525, 1555
NmeAIII GCCGAG 3 cut(s) 73, 1829, 1972
NmuCI GTSAC 5 cut(s) 994, 1217, 1322, 1891, 1975
NruI TCGCGA 1 cut(s) 95
NspI RCATGY 2 cut(s) 272, 288
PaeI GCATGC 1 cut(s) 288
PaeR7I CTCGAG 1 cut(s) 134
PagI TCATGA 4 cut(s) 321, 1197, 1569, 1726
PceI AGGCCT 1 cut(s) 1127
PciSI GCTCTTC 1 cut(s) 86
PctI GAATGC 2 cut(s) 1229, 1579
PdmI GAANNNNTTC 1 cut(s) 80
PfeI GAWTC 6 cut(s) 130, 743, 836, 1047, 1145, 1645
PflMI CCANNNNNTGG 2 cut(s) 576, 1240
PinAI ACCGGT 1 cut(s) 1002
PleI GAGTC 1 cut(s) 860
PpsI GAGTC 1 cut(s) 860
Ppu21I YACGTR 1 cut(s) 1679
PshAI GACNNNNGTC 1 cut(s) 482
Psp6I CCWGG 1 cut(s) 1508
PspFI CCCAGC 2 cut(s) 496, 1379
PspGI CCWGG 1 cut(s) 1508
PspN4I GGNNCC 5 cut(s) 254, 733, 1010, 1525, 1555
PspPI GGNCC 4 cut(s) 118, 252, 1008, 1554
PstI CTGCAG 2 cut(s) 293, 424
PstNI CAGNNNCTG 3 cut(s) 869, 1240, 1256
PsuI RGATCY 2 cut(s) 138, 1735
RruI TCGCGA 1 cut(s) 95
RsaI GTAC 2 cut(s) 267, 1525
RsaNI GTAC 2 cut(s) 266, 1524
RseI CAYNNNNRTG 4 cut(s) 207, 320, 508, 729
SalI GTCGAC 1 cut(s) 398
SapI GCTCTTC 1 cut(s) 86
SaqAI TTAA 4 cut(s) 147, 753, 1310, 1442
Sau3AI GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
Sau96I GGNCC 4 cut(s) 118, 252, 1008, 1554
SchI GAGTC 1 cut(s) 860
ScrFI CCNGG 3 cut(s) 32, 1510, 1829
SduI GDGCHC 3 cut(s) 412, 1687, 1917
SfaNI GCATC 6 cut(s) 167, 328, 1332, 1417, 1621, 1861
SfcI CTRYAG 5 cut(s) 289, 403, 420, 522, 1137
Sfr274I CTCGAG 1 cut(s) 134
SinI GGWCC 1 cut(s) 1008
SlaI CTCGAG 1 cut(s) 134
SmiMI CAYNNNNRTG 4 cut(s) 207, 320, 508, 729
SmlI CTYRAG 4 cut(s) 125, 134, 1107, 1694
SmoI CTYRAG 4 cut(s) 125, 134, 1107, 1694
SphI GCATGC 1 cut(s) 288
Sse9I AATT 4 cut(s) 987, 1154, 1293, 1349
SseBI AGGCCT 1 cut(s) 1127
SsiI CCGC 2 cut(s) 799, 1710
SspI AATATT 1 cut(s) 637
SspMI CTAG 3 cut(s) 603, 1562, 1824
StuI AGGCCT 1 cut(s) 1127
StyD4I CCNGG 3 cut(s) 30, 1508, 1827
StyI CCWWGG 3 cut(s) 802, 933, 1012
TaaI ACNGT 4 cut(s) 7, 404, 448, 1322
TaiI ACGT 5 cut(s) 222, 399, 1224, 1414, 1681
TaqI TCGA 5 cut(s) 135, 336, 351, 399, 1359
TasI AATT 4 cut(s) 987, 1154, 1293, 1349
TatI WGTACW 1 cut(s) 265
TfiI GAWTC 6 cut(s) 130, 743, 836, 1047, 1145, 1645
Tru1I TTAA 4 cut(s) 147, 753, 1310, 1442
Tru9I TTAA 4 cut(s) 147, 753, 1310, 1442
TscAI CASTG 4 cut(s) 417, 591, 898, 1210
TseFI GTSAC 5 cut(s) 994, 1217, 1322, 1891, 1975
Tsp45I GTSAC 5 cut(s) 994, 1217, 1322, 1891, 1975
TspDTI ATGAA 4 cut(s) 338, 924, 1586, 1668
TspGWI ACGGA 2 cut(s) 74, 440
TspRI CASTG 4 cut(s) 417, 591, 898, 1210
Van91I CCANNNNNTGG 2 cut(s) 576, 1240
VneI GTGCAC 2 cut(s) 408, 1913
VpaK11BI GGWCC 1 cut(s) 1008
XapI RAATTY 2 cut(s) 1154, 1349
XceI RCATGY 2 cut(s) 272, 288
XhoI CTCGAG 1 cut(s) 134
XmiI GTMKAC 1 cut(s) 399
XmnI GAANNNNTTC 1 cut(s) 80
XspI CTAG 3 cut(s) 603, 1562, 1824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.