RLG00000006940

Ankyrin repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0002610
Physical Location & Seq
Reverse (-)
12040864 .. 12044092
3229 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006940

Sequence Viewer

Length: 2574 bp
ATGACGGTGTTCGCCGGAAAAGCGCACGTGTTTCCTATCAACTACGAAACCGAGGTGTCGCAGCGGTTGGTCGATGCTGCCCACGACAATGATCCGAAATCGGTGTATGAGTGTCTGGACGATCCTTTCGTCGACGTTAACTACGTCGGAACAGTGTGCTTGAAGAGTAGGAAGACAGAGATTGTGTTGAAAGGTGAGTCGGCTCACGAGGTTGGCGTCGAGTACGAGGAGTTCAAGACTCAGGTCACCGCCTTCTTCCTTGCAGCTCATTCCGGCAATTTGACGCTCGTCAGAAAACTACTGAGTTATGGAGCCAATGTTAATCTGAAACTGTTTCGAGGCTACGCGACGACAGCAGCAGTGAGGGAAGGACACGCACAGATACTGGAGGTTGTTATCAATGCTGGAGCATCTCAGAAGGCCTGCGAGGAGGCCTTGTTGGAGGCAAGCTACTTGGGCCGGGCTAGGCTGGCTGAGATGCTCATGGCATCCGAGTTGATCCGTCCTCAAGCTGCTGTACATGCTCTCGTTTCTGCTAGCTGCAGAGGGTTTGTTGATGTTATAGACACACTCATCAAGTGTGGGGTAAATATCGATGCAATTGACCGGACATTGCTTCAATCTTCGAAGCCATCACTATACACCAACGCCGACTGCAATGCTCTTGTTGCTGCCATTGTCAGCAGGCAGATTTCGGTTGTGAGATTATTGTTGCAGGCTGGAGCCAGAACAGATATCAAGGTGAGTCTTGGAGGCTGGTCCTGGGATGTAAGTACAGGAGAAGAGTTTCGGGTGGGTGCAGGACTAGCCGAGGCGTACAGCGTGACATGGTGTGCTGTGGAGTACTTTGAAGCCAGCGGTGCTATCTTGCGAATGCTCCTACAACATGTCTCCCCTAACATTGCTCATTTTGGGAGGACTCTCATTCACCATGCCATCTTGTGCAATAATGAAAGAGCAGTGGATGTGCTGTTGAGTTGTGGCGCAGATGTAGAGGTTCCGATTAAGACAACTACTTCAGAAACTGAGTATCCCATCCACATGGCTTCGCGGTTTGGATTAAGTAAGATTCTCCAACAACTGATCGATGGTGGCTGCAATGTCAACTCTCGAACGGACTCTAGAGAAACTCCTCTCATGATTTGTGCTAGATATAAACACCAGGAGTGTTTCAGAATTCTTGCTTCTAACGGTGCTGATTTTGGCCTGGTCAATTCTTGTGGTCAAAGTGCAACTGTAATTGCTGAGTCAGCTAAGTGGAGTCTCGGCTTTAAAAGAGTAGTTCTAGACTTGATTCGAGCTGGGAAGGTTGTTCAATCGAGTAATATGACAATCTTTTCTCCTCTATTGTATGTGACTCAAGCAAATGATGTTGCGGCTTTGAAACAGCTGATCAATTGTGGTTGTGAAATCAACTCTCAAACAGAATCTGGAGAAACTGCACTAATGATCTGTGCTAGACATAAACACCAGGAATGCTTCAAAGTTCTTGCTTCAAATGGTGCCGATTTTGGCCTTGTCAACTCTGGCGGTCAGAGTGCAAGCTCAATTGCAGAGTCAGCCAAGTGGACTCCTATCTTCAAACAAGCTATCCTAGATGTGATTCGGGATGGAAAGGTTGTTCGATCAAGCAACACATCAATATGTTCTCCTCTAATGCTTGTGACTCGAGAAAACAATGTTGAGGCTTTGAAACAACTGATTGAGAGGACAGACATCGATGTTGATGAGCAAGACGAGAATGGATACTCAGCTGCAATGATAGCTGCAGCAGATGGTAACTTGGAAGCTTTCAAATTGCTTATCTGTGCAGGAGCTGACATGAATCTGCAGAACAAACATGGTCAGACCCCATTGGACCTACTAGATACAAACCAAAACGGTGAAGAATTTGAAAAATTATTACTGAATCATGCAGTTCAAAAGGGCCCCAATAGTAGTTCCCTTGAGTTCTATGCTCTTCATCTTGCAGCGCAACACGGAGACTTGGATTTGGTTCATACATTGATAAGTCAGGGGTATGATGTTAATGCTTTCGAAGCTGAGGGATACACTCCATTGATGTTAGCAGCAAGAGGTGGCCACGGTAAGCTGTGTGAGCTTTTGATTTCTTTTGGGGCTAGATGTGATACTGTGAATGCAAGACATGAGACGGCACTGTCTCTTGCAAGGAAAAGTACTGGATCTAAAAATGATGCAGAGAAGGCTATATTGAATGAGTTTGCACTAAAACTGGTGCTGGGTGGGAGTCATGTCAAGAAGCACACAAAATGTGGTAAAGGAGCTCCCCATAGTAAATTGCTGAGAATGGTTGGGGCTGCTGGGCTTTTAAGGTGGGGGAAGTCAAGTAAGAGAAATGTGATCTGCAAGAAGGCAGAGGTCGGGCCTAGTGATGCATTCAGATGGAACCGCAGGAGGAAGTTCGACTGTGATGAACCCGGGATGTTCCATGTGGTGACTACAAAAAACAAGGAGCTGCATTTTGTGTGTGAAGGTGGGAATGAAATGGCAGAGTTGTGGGTGAGAGGGATCAAGCTTGTGACAATGAAAGCTATCTTTGGCAAGAATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_3 Ank_4

Protein Analysis

858

Amino Acids

93.27

Weight (kDa)

6.61

Isoelectric Point (pI)

29.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 341 - 402 2.3e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 446 - 505 5.7e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 451 - 515 1.2e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 552 - 638 1.7e-10 Ankyrin repeats (3 copies)
Ank_5 PF13857 567 - 621 2.4e-08 Ankyrin repeats (many copies)
Ank_2 PF12796 654 - 728 1.9e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 654 - 703 8.7e-10 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2158
AccB1I GGYRCC 1 cut(s) 1502
AccI GTMKAC 1 cut(s) 132
AccII CGCG 2 cut(s) 347, 1051
AciI CCGC 7 cut(s) 64, 249, 858, 1051, 1376, 1530, 2410
AclWI GGATC 5 cut(s) 86, 116, 493, 2191, 2537
AcoI YGGCCR 1 cut(s) 2080
AcsI RAATTY 2 cut(s) 1176, 1889
AcuI CTGAAG 1 cut(s) 1002
AcvI CACGTG 1 cut(s) 28
AcyI GRCGYC 1 cut(s) 216
AfaI GTAC 6 cut(s) 224, 519, 775, 818, 845, 2179
AflIII ACRYGT 2 cut(s) 27, 886
AjnI CCWGG 4 cut(s) 761, 1161, 1206, 1470
AloI GAACNNNNNNTCC 2 cut(s) 1605, 1637
Alw21I GWGCWC 1 cut(s) 2287
Alw26I GTCTC 5 cut(s) 895, 1268, 1977, 2144, 2166
AlwI GGATC 5 cut(s) 86, 116, 493, 2191, 2537
AlwNI CAGNNNCTG 4 cut(s) 385, 1025, 1430, 1817
Ama87I CYCGRG 2 cut(s) 1668, 2438
AoxI GGCC 8 cut(s) 420, 432, 457, 1204, 1513, 1927, 2080, 2384
ApaI GGGCCC 1 cut(s) 1931
ApoI RAATTY 2 cut(s) 1176, 1889
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
Asp700I GAANNNNTTC 1 cut(s) 786
AspLEI GCGC 3 cut(s) 25, 986, 1975
AspS9I GGNCC 6 cut(s) 457, 759, 1858, 1927, 1928, 2384
AsuC2I CCSGG 3 cut(s) 461, 2439, 2440
AsuHPI GGTGA 7 cut(s) 206, 238, 754, 920, 1895, 2467, 2533
AsuII TTCGAA 2 cut(s) 626, 2037
AsuNHI GCTAGC 1 cut(s) 536
AvaI CYCGRG 2 cut(s) 1668, 2438
AvaII GGWCC 2 cut(s) 759, 1858
BaeGI GKGCMC 1 cut(s) 1931
BalI TGGCCA 1 cut(s) 2082
BanI GGYRCC 1 cut(s) 1502
BanII GRGCYC 2 cut(s) 1931, 2287
BauI CACGAG 1 cut(s) 206
BbrPI CACGTG 1 cut(s) 28
BbsI GAAGAC 1 cut(s) 179
Bbv12I GWGCWC 1 cut(s) 2287
BbvCI CCTCAGC 1 cut(s) 2043
BccI CCATC 7 cut(s) 640, 944, 1043, 1082, 1604, 1769, 2397
BceAI ACGGC 1 cut(s) 2169
BcgI CGANNNNNNTGC 2 cut(s) 641, 675
BciT130I CCWGG 4 cut(s) 763, 1163, 1208, 1472
BciVI GTATCC 3 cut(s) 1041, 1739, 2042
BclI TGATCA 1 cut(s) 1392
BcnI CCSGG 3 cut(s) 461, 2439, 2440
BcoDI GTCTC 5 cut(s) 895, 1268, 1977, 2144, 2166
BfmI CTRYAG 3 cut(s) 541, 1767, 1829
BfuI GTATCC 3 cut(s) 1041, 1739, 2042
BmcAI AGTACT 2 cut(s) 845, 2179
Bme1390I CCNGG 7 cut(s) 461, 763, 1163, 1208, 1472, 2439, 2440
Bme18I GGWCC 2 cut(s) 759, 1858
BmeT110I CYCGRG 2 cut(s) 1668, 2438
BmgT120I GGNCC 6 cut(s) 457, 759, 1858, 1927, 1928, 2384
BmiI GGNNCC 7 cut(s) 313, 724, 999, 1504, 1929, 1930, 2408
BmrFI CCNGG 7 cut(s) 461, 763, 1163, 1208, 1472, 2439, 2440
BmsI GCATC 7 cut(s) 64, 419, 468, 497, 586, 2185, 2383
BmtI GCTAGC 1 cut(s) 540
BoxI GACNNNNGTC 2 cut(s) 242, 287
BpiI GAAGAC 1 cut(s) 179
BpmI CTGGAG 4 cut(s) 407, 426, 741, 1452
Bpu10I CCTNAGC 1 cut(s) 2043
Bpu14I TTCGAA 2 cut(s) 626, 2037
BpuEI CTTGAG 3 cut(s) 492, 1344, 1967
BpuMI CCSGG 3 cut(s) 461, 2439, 2440
Bsa29I ATCGAT 3 cut(s) 594, 1086, 1719
BsaAI YACGTR 1 cut(s) 28
BsaHI GRCGYC 1 cut(s) 216
BsaJI CCNNGG 5 cut(s) 51, 762, 810, 2083, 2438
BsaWI WCCGGW 1 cut(s) 606
BsaXI ACNNNNNCTCC 4 cut(s) 303, 333, 422, 452
Bse1I ACTGG 3 cut(s) 390, 2185, 2238
Bse3DI GCAATG 5 cut(s) 611, 664, 900, 1105, 1764
BseBI CCWGG 4 cut(s) 763, 1163, 1208, 1472
BseCI ATCGAT 3 cut(s) 594, 1086, 1719
BseDI CCNNGG 5 cut(s) 51, 762, 810, 2083, 2438
BseGI GGATG 6 cut(s) 488, 772, 970, 1035, 1615, 2448
BseMI GCAATG 5 cut(s) 611, 664, 900, 1105, 1764
BseMII CTCAG 9 cut(s) 254, 293, 428, 465, 1017, 1236, 1764, 2034, 2294
BseNI ACTGG 3 cut(s) 390, 2185, 2238
BseRI GAGGAG 5 cut(s) 242, 443, 1122, 1332, 1641
BseSI GKGCMC 1 cut(s) 1931
BseYI CCCAGC 3 cut(s) 1301, 2239, 2321
BsgI GTGCAG 3 cut(s) 819, 1425, 1830
Bsh1236I CGCG 2 cut(s) 347, 1051
BshFI GGCC 8 cut(s) 422, 434, 459, 1206, 1515, 1929, 2082, 2386
BshNI GGYRCC 1 cut(s) 1502
BshVI ATCGAT 3 cut(s) 594, 1086, 1719
BsiHKAI GWGCWC 1 cut(s) 2287
BsiHKCI CYCGRG 2 cut(s) 1668, 2438
BsiSI CCGG 5 cut(s) 15, 273, 460, 607, 2439
BsmAI GTCTC 5 cut(s) 895, 1268, 1977, 2144, 2166
BsmBI CGTCTC 1 cut(s) 2144
BsmI GAATGC 4 cut(s) 879, 1481, 2143, 2396
BsnI GGCC 8 cut(s) 422, 434, 459, 1206, 1515, 1929, 2082, 2386
BsoBI CYCGRG 2 cut(s) 1668, 2438
Bsp119I TTCGAA 2 cut(s) 626, 2037
Bsp120I GGGCCC 1 cut(s) 1927
Bsp1286I GDGCHC 2 cut(s) 1931, 2287
Bsp1407I TGTACA 1 cut(s) 517
BspACI CCGC 7 cut(s) 64, 249, 858, 1051, 1376, 1530, 2410
BspANI GGCC 8 cut(s) 422, 434, 459, 1206, 1515, 1929, 2082, 2386
BspCNI CTCAG 9 cut(s) 253, 294, 427, 466, 1018, 1237, 1763, 2035, 2295
BspDI ATCGAT 3 cut(s) 594, 1086, 1719
BspFNI CGCG 2 cut(s) 347, 1051
BspHI TCATGA 1 cut(s) 1137
BspLI GGNNCC 7 cut(s) 313, 724, 999, 1504, 1929, 1930, 2408
BspMAI CTGCAG 3 cut(s) 545, 1771, 1833
BspOI GCTAGC 1 cut(s) 540
BspPI GGATC 5 cut(s) 86, 116, 493, 2191, 2537
BspQI GCTCTTC 1 cut(s) 1965
BspT104I TTCGAA 2 cut(s) 626, 2037
BspT107I GGYRCC 1 cut(s) 1502
BsrDI GCAATG 5 cut(s) 611, 664, 900, 1105, 1764
BsrGI TGTACA 1 cut(s) 517
BsrI ACTGG 3 cut(s) 390, 2185, 2238
BssECI CCNNGG 5 cut(s) 51, 762, 810, 2083, 2438
BssNI GRCGYC 1 cut(s) 216
BssSI CACGAG 1 cut(s) 206
Bst2BI CACGAG 1 cut(s) 206
Bst2UI CCWGG 4 cut(s) 763, 1163, 1208, 1472
Bst6I CTCTTC 3 cut(s) 158, 777, 1965
BstACI GRCGYC 1 cut(s) 216
BstAUI TGTACA 1 cut(s) 517
BstBAI YACGTR 1 cut(s) 28
BstBI TTCGAA 2 cut(s) 626, 2037
BstC8I GCNNGC 8 cut(s) 424, 448, 471, 538, 686, 717, 856, 1543
BstDSI CCRYGG 1 cut(s) 2083
BstEII GGTNACC 1 cut(s) 244
BstF5I GGATG 6 cut(s) 488, 772, 970, 1035, 1615, 2448
BstFNI CGCG 2 cut(s) 347, 1051
BstHHI GCGC 3 cut(s) 25, 986, 1975
BstMAI GTCTC 5 cut(s) 895, 1268, 1977, 2144, 2166
BstNI CCWGG 4 cut(s) 763, 1163, 1208, 1472
BstNSI RCATGY 2 cut(s) 524, 890
BstPAI GACNNNNGTC 2 cut(s) 242, 287
BstPI GGTNACC 1 cut(s) 244
BstSCI CCNGG 7 cut(s) 459, 761, 1161, 1206, 1470, 2437, 2438
BstSFI CTRYAG 3 cut(s) 541, 1767, 1829
BstSLI GKGCMC 1 cut(s) 1931
BstUI CGCG 2 cut(s) 347, 1051
BstV2I GAAGAC 1 cut(s) 179
BstX2I RGATCY 1 cut(s) 2183
BstXI CCANNNNNNTGG 1 cut(s) 1042
BstYI RGATCY 1 cut(s) 2183
Bsu15I ATCGAT 3 cut(s) 594, 1086, 1719
BsuI GTATCC 3 cut(s) 1041, 1739, 2042
BsuRI GGCC 8 cut(s) 422, 434, 459, 1206, 1515, 1929, 2082, 2386
BsuTUI ATCGAT 3 cut(s) 594, 1086, 1719
BtgI CCRYGG 1 cut(s) 2083
BtsCI GGATG 6 cut(s) 488, 772, 970, 1035, 1615, 2448
BtsI GCAGTG 2 cut(s) 366, 966
BtsIMutI CAGTG 4 cut(s) 159, 366, 966, 2156
Cac8I GCNNGC 8 cut(s) 424, 448, 471, 538, 686, 717, 856, 1543
CaiI CAGNNNCTG 4 cut(s) 385, 1025, 1430, 1817
CciI TCATGA 1 cut(s) 1137
CfoI GCGC 3 cut(s) 25, 986, 1975
Cfr13I GGNCC 6 cut(s) 457, 759, 1858, 1927, 1928, 2384
Cfr9I CCCGGG 1 cut(s) 2438
ClaI ATCGAT 3 cut(s) 594, 1086, 1719
CseI GACGC 2 cut(s) 205, 292
Csp6I GTAC 6 cut(s) 223, 518, 774, 817, 844, 2178
CspCI CAANNNNNGTGG 2 cut(s) 1201, 1236
CviQI GTAC 6 cut(s) 223, 518, 774, 817, 844, 2178
DraI TTTAAA 1 cut(s) 1273
DrdI GACNNNNNNGTC 1 cut(s) 2158
DseDI GACNNNNNNGTC 1 cut(s) 2158
EaeI YGGCCR 1 cut(s) 2080
Eam1104I CTCTTC 3 cut(s) 158, 777, 1965
EarI CTCTTC 3 cut(s) 158, 777, 1965
Ecl136II GAGCTC 1 cut(s) 2285
Eco147I AGGCCT 2 cut(s) 422, 434
Eco24I GRGCYC 2 cut(s) 1931, 2287
Eco32I GATATC 1 cut(s) 736
Eco47I GGWCC 2 cut(s) 759, 1858
Eco53kI GAGCTC 1 cut(s) 2285
Eco57I CTGAAG 1 cut(s) 1002
Eco72I CACGTG 1 cut(s) 28
Eco88I CYCGRG 2 cut(s) 1668, 2438
Eco91I GGTNACC 1 cut(s) 244
EcoICRI GAGCTC 1 cut(s) 2285
EcoO109I RGGNCCY 2 cut(s) 1927, 1928
EcoO65I GGTNACC 1 cut(s) 244
EcoRI GAATTC 1 cut(s) 1176
EcoRII CCWGG 4 cut(s) 761, 1161, 1206, 1470
EcoRV GATATC 1 cut(s) 736
EcoT22I ATGCAT 1 cut(s) 2398
EcoT38I GRGCYC 2 cut(s) 1931, 2287
Esp3I CGTCTC 1 cut(s) 2144
FbaI TGATCA 1 cut(s) 1392
FblI GTMKAC 1 cut(s) 132
FokI GGATG 6 cut(s) 475, 779, 977, 1022, 1622, 2455
FriOI GRGCYC 2 cut(s) 1931, 2287
GlaI GCGC 3 cut(s) 24, 985, 1974
GsaI CCCAGC 3 cut(s) 1305, 2243, 2325
GsuI CTGGAG 4 cut(s) 407, 426, 741, 1452
HaeIII GGCC 8 cut(s) 422, 434, 459, 1206, 1515, 1929, 2082, 2386
HapII CCGG 5 cut(s) 15, 273, 460, 607, 2439
HgaI GACGC 2 cut(s) 205, 292
HhaI GCGC 3 cut(s) 25, 986, 1975
Hin1I GRCGYC 1 cut(s) 216
Hin6I GCGC 3 cut(s) 23, 984, 1973
HinP1I GCGC 3 cut(s) 23, 984, 1973
HincII GTYRAC 4 cut(s) 133, 139, 1105, 1522
HindII GTYRAC 4 cut(s) 133, 139, 1105, 1522
HindIII AAGCTT 2 cut(s) 1788, 2534
HpaI GTTAAC 1 cut(s) 139
HpaII CCGG 5 cut(s) 15, 273, 460, 607, 2439
HphI GGTGA 7 cut(s) 206, 238, 754, 920, 1895, 2467, 2533
Hpy166II GTNNAC 5 cut(s) 133, 139, 1105, 1522, 1569
Hpy8I GTNNAC 5 cut(s) 133, 139, 1105, 1522, 1569
Hpy99I CGWCG 5 cut(s) 134, 137, 149, 221, 352
HpyAV CCTTC 7 cut(s) 262, 362, 412, 1300, 2197, 2365, 2486
HpyCH4IV ACGT 3 cut(s) 27, 135, 144
HpySE526I ACGT 3 cut(s) 27, 135, 144
Hsp92I GRCGYC 1 cut(s) 216
HspAI GCGC 3 cut(s) 23, 984, 1973
Ksp22I TGATCA 1 cut(s) 1392
KspAI GTTAAC 1 cut(s) 139
LguI GCTCTTC 1 cut(s) 1965
LmnI GCTCC 8 cut(s) 311, 407, 722, 882, 1814, 2282, 2290, 2473
LweI GCATC 7 cut(s) 64, 419, 468, 497, 586, 2185, 2383
MaeII ACGT 3 cut(s) 27, 135, 144
MaeIII GTNAC 7 cut(s) 244, 823, 1354, 1663, 1778, 2455, 2539
MboII GAAGA 8 cut(s) 175, 184, 247, 615, 794, 1570, 1898, 1952
MfeI CAATTG 3 cut(s) 600, 1396, 1548
MflI RGATCY 1 cut(s) 2183
MhlI GDGCHC 2 cut(s) 1931, 2287
MlsI TGGCCA 1 cut(s) 2082
MluNI TGGCCA 1 cut(s) 2082
MmeI TCCRAC 3 cut(s) 127, 420, 1099
Mox20I TGGCCA 1 cut(s) 2082
Mph1103I ATGCAT 1 cut(s) 2398
MroXI GAANNNNTTC 1 cut(s) 786
MscI TGGCCA 1 cut(s) 2082
MseI TTAA 7 cut(s) 138, 321, 1005, 1061, 1272, 2028, 2330
MslI CAYNNNNRTG 4 cut(s) 87, 1040, 1642, 2401
Msp20I TGGCCA 1 cut(s) 2082
MspA1I CMGCKG 4 cut(s) 64, 858, 1390, 1754
MspI CCGG 5 cut(s) 15, 273, 460, 607, 2439
MspR9I CCNGG 7 cut(s) 461, 763, 1163, 1208, 1472, 2439, 2440
MunI CAATTG 3 cut(s) 600, 1396, 1548
Mva1269I GAATGC 4 cut(s) 879, 1481, 2143, 2396
MvaI CCWGG 4 cut(s) 763, 1163, 1208, 1472
MvnI CGCG 2 cut(s) 347, 1051
NciI CCSGG 3 cut(s) 461, 2439, 2440
NheI GCTAGC 1 cut(s) 536
NlaIV GGNNCC 7 cut(s) 313, 724, 999, 1504, 1929, 1930, 2408
NmeAIII GCCGAG 2 cut(s) 835, 1245
NmuCI GTSAC 6 cut(s) 244, 823, 1354, 1663, 2455, 2539
NsiI ATGCAT 1 cut(s) 2398
NspI RCATGY 2 cut(s) 524, 890
NspV TTCGAA 2 cut(s) 626, 2037
PaeR7I CTCGAG 1 cut(s) 1668
PagI TCATGA 1 cut(s) 1137
PceI AGGCCT 2 cut(s) 422, 434
PciI ACATGT 1 cut(s) 886
PciSI GCTCTTC 1 cut(s) 1965
PcsI WCGNNNNNNNCGW 3 cut(s) 126, 141, 213
PctI GAATGC 4 cut(s) 879, 1481, 2143, 2396
PdmI GAANNNNTTC 1 cut(s) 786
PfeI GAWTC 6 cut(s) 1069, 1294, 1427, 1603, 1825, 1909
PmaCI CACGTG 1 cut(s) 28
PmlI CACGTG 1 cut(s) 28
Ppu21I YACGTR 1 cut(s) 28
PscI ACATGT 1 cut(s) 886
PshAI GACNNNNGTC 2 cut(s) 242, 287
Psp124BI GAGCTC 1 cut(s) 2287
Psp6I CCWGG 4 cut(s) 761, 1161, 1206, 1470
PspCI CACGTG 1 cut(s) 28
PspEI GGTNACC 1 cut(s) 244
PspFI CCCAGC 3 cut(s) 1301, 2239, 2321
PspGI CCWGG 4 cut(s) 761, 1161, 1206, 1470
PspN4I GGNNCC 7 cut(s) 313, 724, 999, 1504, 1929, 1930, 2408
PspOMI GGGCCC 1 cut(s) 1927
PspPI GGNCC 6 cut(s) 457, 759, 1858, 1927, 1928, 2384
PsrI GAACNNNNNNTAC 2 cut(s) 215, 247
PstI CTGCAG 3 cut(s) 545, 1771, 1833
PstNI CAGNNNCTG 4 cut(s) 385, 1025, 1430, 1817
PsuI RGATCY 1 cut(s) 2183
PvuII CAGCTG 2 cut(s) 1390, 1754
RsaI GTAC 6 cut(s) 224, 519, 775, 818, 845, 2179
RsaNI GTAC 6 cut(s) 223, 518, 774, 817, 844, 2178
RseI CAYNNNNRTG 4 cut(s) 87, 1040, 1642, 2401
SacI GAGCTC 1 cut(s) 2287
SalI GTCGAC 1 cut(s) 131
SapI GCTCTTC 1 cut(s) 1965
SaqAI TTAA 7 cut(s) 138, 321, 1005, 1061, 1272, 2028, 2330
Sau96I GGNCC 6 cut(s) 457, 759, 1858, 1927, 1928, 2384
ScaI AGTACT 2 cut(s) 845, 2179
ScrFI CCNGG 7 cut(s) 461, 763, 1163, 1208, 1472, 2439, 2440
SduI GDGCHC 2 cut(s) 1931, 2287
SfaNI GCATC 7 cut(s) 64, 419, 468, 497, 586, 2185, 2383
SfcI CTRYAG 3 cut(s) 541, 1767, 1829
Sfr274I CTCGAG 1 cut(s) 1668
SfuI TTCGAA 2 cut(s) 626, 2037
SgrDI CGTCGACG 1 cut(s) 131
SinI GGWCC 2 cut(s) 759, 1858
SlaI CTCGAG 1 cut(s) 1668
SmaI CCCGGG 1 cut(s) 2440
SmiMI CAYNNNNRTG 4 cut(s) 87, 1040, 1642, 2401
SmlI CTYRAG 4 cut(s) 507, 1359, 1668, 1946
SmoI CTYRAG 4 cut(s) 507, 1359, 1668, 1946
SseBI AGGCCT 2 cut(s) 422, 434
SsiI CCGC 7 cut(s) 64, 249, 858, 1051, 1376, 1530, 2410
SstI GAGCTC 1 cut(s) 2287
StuI AGGCCT 2 cut(s) 422, 434
StyD4I CCNGG 7 cut(s) 459, 761, 1161, 1206, 1470, 2437, 2438
TaiI ACGT 3 cut(s) 30, 138, 147
TatI WGTACW 4 cut(s) 517, 773, 843, 2177
TauI GCSGC 1 cut(s) 1379
TfiI GAWTC 6 cut(s) 1069, 1294, 1427, 1603, 1825, 1909
Tru1I TTAA 7 cut(s) 138, 321, 1005, 1061, 1272, 2028, 2330
Tru9I TTAA 7 cut(s) 138, 321, 1005, 1061, 1272, 2028, 2330
TscAI CASTG 4 cut(s) 159, 366, 966, 2163
TseFI GTSAC 6 cut(s) 244, 823, 1354, 1663, 2455, 2539
Tsp45I GTSAC 6 cut(s) 244, 823, 1354, 1663, 2455, 2539
TspDTI ATGAA 7 cut(s) 966, 1838, 1952, 1988, 2448, 2517, 2561
TspGWI ACGGA 3 cut(s) 491, 1130, 1995
TspMI CCCGGG 1 cut(s) 2438
TspRI CASTG 4 cut(s) 159, 366, 966, 2163
VpaK11BI GGWCC 2 cut(s) 759, 1858
XapI RAATTY 2 cut(s) 1176, 1889
XbaI TCTAGA 2 cut(s) 1121, 1285
XceI RCATGY 2 cut(s) 524, 890
XhoI CTCGAG 1 cut(s) 1668
XmaI CCCGGG 1 cut(s) 2438
XmiI GTMKAC 1 cut(s) 132
XmnI GAANNNNTTC 1 cut(s) 786
ZrmI AGTACT 2 cut(s) 845, 2179
Zsp2I ATGCAT 1 cut(s) 2398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.