Ankyrin repeat
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G14230 AT5G14230 |
| fragaria_vesca | FvH4_4g24120 FvH4_6g53080 |
| malus_domestica | MD09G1014800.v1.1 MD13G1115300.v1.1 MD17G1014900.v1.1 |
| prunus_persica | Prupe.1G232000_v2.0.a1 Prupe.1G232000_v2.0.a1 Prupe.3G302900_v2.0.a1 |
| pyrus_communis | pycom111g01210 pycom13g09980 pycom16g09700 pycom16g09730 pycom16g09770 pycom17g01190 pycom17g01200 |
| rosa_chinensis | RchiOBHm_Chr2g0174861 RchiOBHm_Chr4g0430901 |
| rosa_laevigata | RLG00000006940 RLG00000022302 |
| rosa_multiflora | Rmu_sc0006263.1_g000010 Rmu_sc0009766.1_g000002 Rmu_sc0036631.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00077630 Rroxscaffold_5G00372590 |
| rosa_rugosa | Rorug02G0580100 Rorug02G0580200 Rorug04G0247300 |
| rosa_samantha | Rh2AG661200 Rh2BG672600 Rh2CG635400 Rh2DG685700 Rh4AG302700 Rh4AG303600 Rh4BG310800 Rh4CG327200 Rh4DG307000 |
| rosa_wichuraiana | Rw2G054190 Rw4G026310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1481 |
| Acc36I | ACCTGC | 3 cut(s) | 256, 1099, 1481 |
| Acc65I | GGTACC | 1 cut(s) | 28 |
| AccB1I | GGYRCC | 1 cut(s) | 28 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1804 |
| AccBSI | CCGCTC | 1 cut(s) | 290 |
| AccI | GTMKAC | 1 cut(s) | 63 |
| AccII | CGCG | 2 cut(s) | 26, 1013 |
| AciI | CCGC | 8 cut(s) | 26, 288, 429, 526, 1013, 1094, 1812, 1986 |
| AclWI | GGATC | 6 cut(s) | 140, 507, 517, 520, 1153, 2249 |
| AcsI | RAATTY | 6 cut(s) | 301, 812, 1203, 1607, 1646, 2132 |
| AcvI | CACGTG | 1 cut(s) | 52 |
| AdeI | CACNNNGTG | 1 cut(s) | 1983 |
| AfaI | GTAC | 4 cut(s) | 30, 248, 802, 872 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 38, 938, 1531, 1804, 2094 |
| AflIII | ACRYGT | 1 cut(s) | 51 |
| AjiI | CACGTC | 1 cut(s) | 160 |
| AjnI | CCWGG | 8 cut(s) | 90, 324, 788, 854, 1233, 1500, 1680, 2149 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1907, 1939 |
| Alw21I | GWGCWC | 2 cut(s) | 637, 1999 |
| Alw26I | GTCTC | 2 cut(s) | 1692, 1859 |
| AlwI | GGATC | 6 cut(s) | 140, 507, 517, 520, 1153, 2249 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 91 |
| Ama87I | CYCGRG | 2 cut(s) | 19, 1386 |
| AoxI | GGCC | 6 cut(s) | 72, 491, 653, 1231, 1795, 2085 |
| ApoI | RAATTY | 6 cut(s) | 301, 812, 1203, 1607, 1646, 2132 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 149, 181, 1691, 1723, 1858, 1890 |
| AseI | ATTAAT | 2 cut(s) | 1113, 1619 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 813 |
| Asp718I | GGTACC | 1 cut(s) | 28 |
| AspLEI | GCGC | 7 cut(s) | 26, 49, 90, 229, 688, 900, 1013 |
| AspS9I | GGNCC | 1 cut(s) | 786 |
| AsuC2I | CCSGG | 1 cut(s) | 805 |
| AsuHPI | GGTGA | 4 cut(s) | 947, 2083, 2179, 2245 |
| AsuII | TTCGAA | 1 cut(s) | 13 |
| AsuNHI | GCTAGC | 1 cut(s) | 2099 |
| AvaI | CYCGRG | 2 cut(s) | 19, 1386 |
| AvaII | GGWCC | 1 cut(s) | 786 |
| BamHI | GGATCC | 1 cut(s) | 512 |
| BanI | GGYRCC | 1 cut(s) | 28 |
| BanII | GRGCYC | 2 cut(s) | 1291, 1999 |
| BauI | CACGAG | 1 cut(s) | 230 |
| BbrPI | CACGTG | 1 cut(s) | 52 |
| BbsI | GAAGAC | 2 cut(s) | 203, 399 |
| Bbv12I | GWGCWC | 2 cut(s) | 637, 1999 |
| BccI | CCATC | 7 cut(s) | 664, 971, 1112, 1211, 1754, 2010, 2109 |
| BceAI | ACGGC | 3 cut(s) | 1094, 1643, 1884 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 218, 252 |
| BciT130I | CCWGG | 8 cut(s) | 92, 326, 790, 856, 1235, 1502, 1682, 2151 |
| BcnI | CCSGG | 1 cut(s) | 805 |
| BcoDI | GTCTC | 2 cut(s) | 1692, 1859 |
| BfaI | CTAG | 7 cut(s) | 489, 833, 1176, 1281, 1547, 1836, 2100 |
| BfmI | CTRYAG | 3 cut(s) | 565, 1212, 1485 |
| BfoI | RGCGCY | 1 cut(s) | 91 |
| BfuAI | ACCTGC | 3 cut(s) | 256, 1099, 1481 |
| BlpI | GCTNAGC | 1 cut(s) | 837 |
| BmcAI | AGTACT | 1 cut(s) | 872 |
| Bme1390I | CCNGG | 9 cut(s) | 92, 326, 790, 805, 856, 1235, 1502, 1682, 2151 |
| Bme18I | GGWCC | 1 cut(s) | 786 |
| BmeT110I | CYCGRG | 2 cut(s) | 19, 1386 |
| BmgBI | CACGTC | 1 cut(s) | 160 |
| BmgT120I | GGNCC | 1 cut(s) | 786 |
| BmiI | GGNNCC | 3 cut(s) | 30, 337, 514 |
| BmrFI | CCNGG | 9 cut(s) | 92, 326, 790, 805, 856, 1235, 1502, 1682, 2151 |
| BmrI | ACTGGG | 1 cut(s) | 1908 |
| BmsI | GCATC | 6 cut(s) | 443, 492, 610, 1195, 1744, 1897 |
| BmtI | GCTAGC | 1 cut(s) | 2103 |
| BmuI | ACTGGG | 1 cut(s) | 1908 |
| BoxI | GACNNNNGTC | 1 cut(s) | 266 |
| BpiI | GAAGAC | 2 cut(s) | 203, 399 |
| BpmI | CTGGAG | 1 cut(s) | 768 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 837 |
| Bpu14I | TTCGAA | 1 cut(s) | 13 |
| BpuEI | CTTGAG | 1 cut(s) | 516 |
| BpuMI | CCSGG | 1 cut(s) | 805 |
| BsaAI | YACGTR | 1 cut(s) | 52 |
| BsaJI | CCNNGG | 5 cut(s) | 75, 325, 789, 804, 2088 |
| BsaWI | WCCGGW | 1 cut(s) | 58 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 327, 357, 446, 476 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 38, 938, 1531, 1804, 2094 |
| Bse118I | RCCGGY | 1 cut(s) | 708 |
| Bse1I | ACTGG | 3 cut(s) | 882, 1903, 2282 |
| BseBI | CCWGG | 8 cut(s) | 92, 326, 790, 856, 1235, 1502, 1682, 2151 |
| BseDI | CCNNGG | 5 cut(s) | 75, 325, 789, 804, 2088 |
| BseGI | GGATG | 6 cut(s) | 619, 799, 1021, 1342, 1912, 1933 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 38, 938, 1531, 1804, 2094 |
| BseMII | CTCAG | 5 cut(s) | 452, 828, 1263, 1482, 2237 |
| BseNI | ACTGG | 3 cut(s) | 882, 1903, 2282 |
| BseRI | GAGGAG | 4 cut(s) | 266, 467, 1359, 1806 |
| BseYI | CCCAGC | 1 cut(s) | 1529 |
| BsgI | GTGCAG | 4 cut(s) | 233, 846, 1143, 1623 |
| Bsh1236I | CGCG | 2 cut(s) | 26, 1013 |
| Bsh1285I | CGRYCG | 1 cut(s) | 63 |
| BshFI | GGCC | 6 cut(s) | 74, 493, 655, 1233, 1797, 2087 |
| BshNI | GGYRCC | 1 cut(s) | 28 |
| BsiEI | CGRYCG | 1 cut(s) | 63 |
| BsiHKAI | GWGCWC | 2 cut(s) | 637, 1999 |
| BsiHKCI | CYCGRG | 2 cut(s) | 19, 1386 |
| BsiSI | CCGG | 4 cut(s) | 39, 59, 709, 804 |
| BslFI | GGGAC | 1 cut(s) | 187 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 38, 938, 1531, 1804, 2094 |
| BsmAI | GTCTC | 2 cut(s) | 1692, 1859 |
| BsmBI | CGTCTC | 1 cut(s) | 1859 |
| BsmFI | GGGAC | 1 cut(s) | 187 |
| BsmI | GAATGC | 2 cut(s) | 1199, 1858 |
| BsnI | GGCC | 6 cut(s) | 74, 493, 655, 1233, 1797, 2087 |
| BsoBI | CYCGRG | 2 cut(s) | 19, 1386 |
| Bsp119I | TTCGAA | 1 cut(s) | 13 |
| Bsp1286I | GDGCHC | 3 cut(s) | 637, 1291, 1999 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 837 |
| BspACI | CCGC | 8 cut(s) | 26, 288, 429, 526, 1013, 1094, 1812, 1986 |
| BspANI | GGCC | 6 cut(s) | 74, 493, 655, 1233, 1797, 2087 |
| BspCNI | CTCAG | 5 cut(s) | 451, 829, 1264, 1481, 2236 |
| BspFNI | CGCG | 2 cut(s) | 26, 1013 |
| BspHI | TCATGA | 1 cut(s) | 1476 |
| BspLI | GGNNCC | 3 cut(s) | 30, 337, 514 |
| BspMAI | CTGCAG | 3 cut(s) | 569, 1216, 1489 |
| BspMI | ACCTGC | 3 cut(s) | 256, 1099, 1481 |
| BspOI | GCTAGC | 1 cut(s) | 2103 |
| BspPI | GGATC | 6 cut(s) | 140, 507, 517, 520, 1153, 2249 |
| BspT104I | TTCGAA | 1 cut(s) | 13 |
| BspT107I | GGYRCC | 1 cut(s) | 28 |
| BsrBI | CCGCTC | 1 cut(s) | 290 |
| BsrFI | RCCGGY | 1 cut(s) | 708 |
| BsrI | ACTGG | 3 cut(s) | 882, 1903, 2282 |
| BssAI | RCCGGY | 1 cut(s) | 708 |
| BssECI | CCNNGG | 5 cut(s) | 75, 325, 789, 804, 2088 |
| BssSI | CACGAG | 1 cut(s) | 230 |
| Bst2BI | CACGAG | 1 cut(s) | 230 |
| Bst2UI | CCWGG | 8 cut(s) | 92, 326, 790, 856, 1235, 1502, 1682, 2151 |
| Bst4CI | ACNGT | 6 cut(s) | 7, 178, 357, 680, 848, 1601 |
| Bst6I | CTCTTC | 1 cut(s) | 2162 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1220 |
| BstBAI | YACGTR | 1 cut(s) | 52 |
| BstBI | TTCGAA | 1 cut(s) | 13 |
| BstDEI | CTNAG | 5 cut(s) | 438, 837, 1272, 1468, 2223 |
| BstEII | GGTNACC | 2 cut(s) | 1496, 2167 |
| BstF5I | GGATG | 6 cut(s) | 619, 799, 1021, 1342, 1912, 1933 |
| BstFNI | CGCG | 2 cut(s) | 26, 1013 |
| BstH2I | RGCGCY | 1 cut(s) | 91 |
| BstHHI | GCGC | 7 cut(s) | 26, 49, 90, 229, 688, 900, 1013 |
| BstMAI | GTCTC | 2 cut(s) | 1692, 1859 |
| BstMCI | CGRYCG | 1 cut(s) | 63 |
| BstNI | CCWGG | 8 cut(s) | 92, 326, 790, 856, 1235, 1502, 1682, 2151 |
| BstNSI | RCATGY | 2 cut(s) | 450, 1634 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 266 |
| BstPI | GGTNACC | 2 cut(s) | 1496, 2167 |
| BstSCI | CCNGG | 9 cut(s) | 90, 324, 788, 803, 854, 1233, 1500, 1680, 2149 |
| BstSFI | CTRYAG | 3 cut(s) | 565, 1212, 1485 |
| BstUI | CGCG | 2 cut(s) | 26, 1013 |
| BstV2I | GAAGAC | 2 cut(s) | 203, 399 |
| BstX2I | RGATCY | 1 cut(s) | 512 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1069 |
| BstYI | RGATCY | 1 cut(s) | 512 |
| BsuRI | GGCC | 6 cut(s) | 74, 493, 655, 1233, 1797, 2087 |
| BtrI | CACGTC | 1 cut(s) | 160 |
| BtsCI | GGATG | 6 cut(s) | 619, 799, 1021, 1342, 1912, 1933 |
| BtsI | GCAGTG | 3 cut(s) | 270, 635, 2051 |
| BtsIMutI | CAGTG | 7 cut(s) | 183, 270, 635, 676, 853, 889, 2051 |
| BveI | ACCTGC | 3 cut(s) | 256, 1099, 1481 |
| CaiI | CAGNNNCTG | 1 cut(s) | 91 |
| CciI | TCATGA | 1 cut(s) | 1476 |
| CfoI | GCGC | 7 cut(s) | 26, 49, 90, 229, 688, 900, 1013 |
| Cfr10I | RCCGGY | 1 cut(s) | 708 |
| Cfr13I | GGNCC | 1 cut(s) | 786 |
| CseI | GACGC | 3 cut(s) | 107, 271, 316 |
| CsiI | ACCWGGT | 1 cut(s) | 854 |
| Csp6I | GTAC | 4 cut(s) | 29, 247, 801, 871 |
| CviQI | GTAC | 4 cut(s) | 29, 247, 801, 871 |
| DdeI | CTNAG | 5 cut(s) | 438, 837, 1272, 1468, 2223 |
| DraIII | CACNNNGTG | 1 cut(s) | 1983 |
| Eam1104I | CTCTTC | 1 cut(s) | 2162 |
| EarI | CTCTTC | 1 cut(s) | 2162 |
| EciI | GGCGGA | 1 cut(s) | 515 |
| Ecl136II | GAGCTC | 1 cut(s) | 1997 |
| Eco147I | AGGCCT | 1 cut(s) | 493 |
| Eco24I | GRGCYC | 2 cut(s) | 1291, 1999 |
| Eco47I | GGWCC | 1 cut(s) | 786 |
| Eco53kI | GAGCTC | 1 cut(s) | 1997 |
| Eco72I | CACGTG | 1 cut(s) | 52 |
| Eco88I | CYCGRG | 2 cut(s) | 19, 1386 |
| Eco91I | GGTNACC | 2 cut(s) | 1496, 2167 |
| EcoICRI | GAGCTC | 1 cut(s) | 1997 |
| EcoO65I | GGTNACC | 2 cut(s) | 1496, 2167 |
| EcoRII | CCWGG | 8 cut(s) | 90, 324, 788, 854, 1233, 1500, 1680, 2149 |
| EcoT38I | GRGCYC | 2 cut(s) | 1291, 1999 |
| Esp3I | CGTCTC | 1 cut(s) | 1859 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 759, 791 |
| FaqI | GGGAC | 1 cut(s) | 187 |
| FauI | CCCGC | 2 cut(s) | 422, 1805 |
| FblI | GTMKAC | 1 cut(s) | 63 |
| FokI | GGATG | 6 cut(s) | 626, 806, 1028, 1349, 1919, 1940 |
| FriOI | GRGCYC | 2 cut(s) | 1291, 1999 |
| FspBI | CTAG | 7 cut(s) | 489, 833, 1176, 1281, 1547, 1836, 2100 |
| GlaI | GCGC | 7 cut(s) | 25, 48, 89, 228, 687, 899, 1012 |
| GsaI | CCCAGC | 1 cut(s) | 1533 |
| GsuI | CTGGAG | 1 cut(s) | 768 |
| HaeII | RGCGCY | 1 cut(s) | 91 |
| HaeIII | GGCC | 6 cut(s) | 74, 493, 655, 1233, 1797, 2087 |
| HapII | CCGG | 4 cut(s) | 39, 59, 709, 804 |
| HgaI | GACGC | 3 cut(s) | 107, 271, 316 |
| HhaI | GCGC | 7 cut(s) | 26, 49, 90, 229, 688, 900, 1013 |
| Hin6I | GCGC | 7 cut(s) | 24, 47, 88, 227, 686, 898, 1011 |
| HinP1I | GCGC | 7 cut(s) | 24, 47, 88, 227, 686, 898, 1011 |
| HincII | GTYRAC | 2 cut(s) | 64, 589 |
| HindII | GTYRAC | 2 cut(s) | 64, 589 |
| HindIII | AAGCTT | 2 cut(s) | 1506, 2246 |
| HpaII | CCGG | 4 cut(s) | 39, 59, 709, 804 |
| HphI | GGTGA | 4 cut(s) | 947, 2083, 2179, 2245 |
| Hpy166II | GTNNAC | 7 cut(s) | 64, 97, 157, 163, 589, 676, 1132 |
| Hpy188I | TCNGA | 6 cut(s) | 517, 728, 1029, 1301, 1566, 1730 |
| Hpy188III | TCNNGA | 9 cut(s) | 172, 259, 297, 1149, 1190, 1442, 1477, 1751, 2014 |
| Hpy8I | GTNNAC | 7 cut(s) | 64, 97, 157, 163, 589, 676, 1132 |
| Hpy99I | CGWCG | 2 cut(s) | 173, 1448 |
| HpyAV | CCTTC | 2 cut(s) | 1327, 1897 |
| HpyCH4III | ACNGT | 6 cut(s) | 7, 178, 357, 680, 848, 1601 |
| HpyCH4IV | ACGT | 2 cut(s) | 51, 159 |
| HpyF3I | CTNAG | 5 cut(s) | 438, 837, 1272, 1468, 2223 |
| HpySE526I | ACGT | 2 cut(s) | 51, 159 |
| HspAI | GCGC | 7 cut(s) | 24, 47, 88, 227, 686, 898, 1011 |
| KpnI | GGTACC | 1 cut(s) | 32 |
| KroI | GCCGGC | 1 cut(s) | 708 |
| KroNI | GCCGGC | 1 cut(s) | 710 |
| LmnI | GCTCC | 7 cut(s) | 327, 335, 1427, 1753, 1994, 2002, 2185 |
| LweI | GCATC | 6 cut(s) | 443, 492, 610, 1195, 1744, 1897 |
| MabI | ACCWGGT | 1 cut(s) | 854 |
| MaeI | CTAG | 7 cut(s) | 489, 833, 1176, 1281, 1547, 1836, 2100 |
| MaeII | ACGT | 2 cut(s) | 51, 159 |
| MaeIII | GTNAC | 8 cut(s) | 268, 850, 971, 1381, 1496, 1841, 2167, 2251 |
| MbiI | CCGCTC | 1 cut(s) | 290 |
| MboII | GAAGA | 8 cut(s) | 205, 208, 404, 821, 1236, 1423, 1981, 2149 |
| MfeI | CAATTG | 1 cut(s) | 1266 |
| MflI | RGATCY | 1 cut(s) | 512 |
| MhlI | GDGCHC | 3 cut(s) | 637, 1291, 1999 |
| MlyI | GAGTC | 7 cut(s) | 230, 723, 781, 940, 1283, 1378, 2148 |
| MmeI | TCCRAC | 2 cut(s) | 444, 1324 |
| MroNI | GCCGGC | 1 cut(s) | 708 |
| MroXI | GAANNNNTTC | 1 cut(s) | 813 |
| MseI | TTAA | 5 cut(s) | 1032, 1113, 1619, 1626, 1743 |
| MslI | CAYNNNNRTG | 1 cut(s) | 681 |
| MspA1I | CMGCKG | 1 cut(s) | 1472 |
| MspI | CCGG | 4 cut(s) | 39, 59, 709, 804 |
| MspR9I | CCNGG | 9 cut(s) | 92, 326, 790, 805, 856, 1235, 1502, 1682, 2151 |
| MunI | CAATTG | 1 cut(s) | 1266 |
| Mva1269I | GAATGC | 2 cut(s) | 1199, 1858 |
| MvaI | CCWGG | 8 cut(s) | 92, 326, 790, 856, 1235, 1502, 1682, 2151 |
| MvnI | CGCG | 2 cut(s) | 26, 1013 |
| NaeI | GCCGGC | 1 cut(s) | 710 |
| NciI | CCSGG | 1 cut(s) | 805 |
| NgoMIV | GCCGGC | 1 cut(s) | 708 |
| NheI | GCTAGC | 1 cut(s) | 2099 |
| NlaIV | GGNNCC | 3 cut(s) | 30, 337, 514 |
| NmeAIII | GCCGAG | 3 cut(s) | 100, 523, 2113 |
| NmuCI | GTSAC | 6 cut(s) | 268, 850, 1381, 1841, 2167, 2251 |
| NspI | RCATGY | 2 cut(s) | 450, 1634 |
| NspV | TTCGAA | 1 cut(s) | 13 |
| PaeR7I | CTCGAG | 2 cut(s) | 19, 1386 |
| PagI | TCATGA | 1 cut(s) | 1476 |
| PaqCI | CACCTGC | 1 cut(s) | 1481 |
| PceI | AGGCCT | 1 cut(s) | 493 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 105, 165, 2119 |
| PctI | GAATGC | 2 cut(s) | 1199, 1858 |
| PdiI | GCCGGC | 1 cut(s) | 710 |
| PdmI | GAANNNNTTC | 1 cut(s) | 813 |
| PfeI | GAWTC | 4 cut(s) | 346, 1321, 2105, 2119 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1804 |
| PleI | GAGTC | 7 cut(s) | 229, 723, 780, 940, 1282, 1378, 2148 |
| PmaCI | CACGTG | 1 cut(s) | 52 |
| PmlI | CACGTG | 1 cut(s) | 52 |
| PpsI | GAGTC | 7 cut(s) | 229, 723, 780, 940, 1282, 1378, 2148 |
| Ppu21I | YACGTR | 1 cut(s) | 52 |
| PshAI | GACNNNNGTC | 1 cut(s) | 266 |
| PshBI | ATTAAT | 2 cut(s) | 1113, 1619 |
| Psp124BI | GAGCTC | 1 cut(s) | 1999 |
| Psp6I | CCWGG | 8 cut(s) | 90, 324, 788, 854, 1233, 1500, 1680, 2149 |
| PspCI | CACGTG | 1 cut(s) | 52 |
| PspEI | GGTNACC | 2 cut(s) | 1496, 2167 |
| PspFI | CCCAGC | 1 cut(s) | 1529 |
| PspGI | CCWGG | 8 cut(s) | 90, 324, 788, 854, 1233, 1500, 1680, 2149 |
| PspN4I | GGNNCC | 3 cut(s) | 30, 337, 514 |
| PspPI | GGNCC | 1 cut(s) | 786 |
| PspXI | VCTCGAGB | 2 cut(s) | 19, 1386 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 239, 271 |
| PstI | CTGCAG | 3 cut(s) | 569, 1216, 1489 |
| PstNI | CAGNNNCTG | 1 cut(s) | 91 |
| PsuI | RGATCY | 1 cut(s) | 512 |
| PvuII | CAGCTG | 1 cut(s) | 1472 |
| RsaI | GTAC | 4 cut(s) | 30, 248, 802, 872 |
| RsaNI | GTAC | 4 cut(s) | 29, 247, 801, 871 |
| RseI | CAYNNNNRTG | 1 cut(s) | 681 |
| SacI | GAGCTC | 1 cut(s) | 1999 |
| SalI | GTCGAC | 1 cut(s) | 62 |
| SaqAI | TTAA | 5 cut(s) | 1032, 1113, 1619, 1626, 1743 |
| Sau96I | GGNCC | 1 cut(s) | 786 |
| ScaI | AGTACT | 1 cut(s) | 872 |
| SchI | GAGTC | 7 cut(s) | 230, 723, 781, 940, 1283, 1378, 2148 |
| ScrFI | CCNGG | 9 cut(s) | 92, 326, 790, 805, 856, 1235, 1502, 1682, 2151 |
| SduI | GDGCHC | 3 cut(s) | 637, 1291, 1999 |
| SexAI | ACCWGGT | 1 cut(s) | 854 |
| SfaNI | GCATC | 6 cut(s) | 443, 492, 610, 1195, 1744, 1897 |
| SfcI | CTRYAG | 3 cut(s) | 565, 1212, 1485 |
| Sfr274I | CTCGAG | 2 cut(s) | 19, 1386 |
| SfuI | TTCGAA | 1 cut(s) | 13 |
| SinI | GGWCC | 1 cut(s) | 786 |
| SlaI | CTCGAG | 2 cut(s) | 19, 1386 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 681 |
| SmlI | CTYRAG | 3 cut(s) | 19, 531, 1386 |
| SmoI | CTYRAG | 3 cut(s) | 19, 531, 1386 |
| SseBI | AGGCCT | 1 cut(s) | 493 |
| SsiI | CCGC | 8 cut(s) | 26, 288, 429, 526, 1013, 1094, 1812, 1986 |
| SspI | AATATT | 1 cut(s) | 1362 |
| SspMI | CTAG | 7 cut(s) | 489, 833, 1176, 1281, 1547, 1836, 2100 |
| SstI | GAGCTC | 1 cut(s) | 1999 |
| StuI | AGGCCT | 1 cut(s) | 493 |
| StyD4I | CCNGG | 9 cut(s) | 90, 324, 788, 803, 854, 1233, 1500, 1680, 2149 |
| TaaI | ACNGT | 6 cut(s) | 7, 178, 357, 680, 848, 1601 |
| TaiI | ACGT | 2 cut(s) | 54, 162 |
| TatI | WGTACW | 1 cut(s) | 870 |
| TauI | GCSGC | 2 cut(s) | 290, 1989 |
| TfiI | GAWTC | 4 cut(s) | 346, 1321, 2105, 2119 |
| Tru1I | TTAA | 5 cut(s) | 1032, 1113, 1619, 1626, 1743 |
| Tru9I | TTAA | 5 cut(s) | 1032, 1113, 1619, 1626, 1743 |
| TscAI | CASTG | 7 cut(s) | 183, 277, 642, 683, 853, 889, 2051 |
| TseFI | GTSAC | 6 cut(s) | 268, 850, 1381, 1841, 2167, 2251 |
| Tsp45I | GTSAC | 6 cut(s) | 268, 850, 1381, 1841, 2167, 2251 |
| TspDTI | ATGAA | 6 cut(s) | 993, 1470, 1556, 1703, 2160, 2273 |
| TspRI | CASTG | 7 cut(s) | 183, 277, 642, 683, 853, 889, 2051 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1804 |
| VpaK11BI | GGWCC | 1 cut(s) | 786 |
| VspI | ATTAAT | 2 cut(s) | 1113, 1619 |
| XapI | RAATTY | 6 cut(s) | 301, 812, 1203, 1607, 1646, 2132 |
| XceI | RCATGY | 2 cut(s) | 450, 1634 |
| XhoI | CTCGAG | 2 cut(s) | 19, 1386 |
| XmiI | GTMKAC | 1 cut(s) | 63 |
| XmnI | GAANNNNTTC | 1 cut(s) | 813 |
| XspI | CTAG | 7 cut(s) | 489, 833, 1176, 1281, 1547, 1836, 2100 |
| ZrmI | AGTACT | 1 cut(s) | 872 |