Rh2AG661200

Ankyrin repeats (many copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0002610
Physical Location & Seq
Reverse (-)
87687119 .. 87691380
4262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG661200.1

Sequence Viewer

Length: 2004 bp
ATGACGGTTTTCTCCAGCAAACAGGTGTTCCCGGTGGACTGCGAGGCCGAGAGCATTGGAGCTGATGTAAATCAGAAGCTCTTCCGTGGCTTCGCGACAACAGCAGCAGTAAGAGAGGGCCATCTTGAGATTCTCGAGATCCTACTTAAAGCTGGAGCATCTCAACCAGCTTGTGAGGAAGCTCTGTTGGAGGCAAGTTGTCATGGAAATGCTAAAAACGTGGAGCTGCTCATGTCCTCTGATTTGATCCGGCCCCATCTTGCTGTACATGCTATTGTCATAGCATGCTGCAGGGGGTTTGTGGATGTGGTTGACACTCTCATGAAGTGTGGTGTCGATGCAAGTGCAGTCGATAGGATACTGCTTCAGTCATCTAAGCCTTCTCTGCACACCAACGTCGACTGTAGTGCACTGGTAGCTGCAGTTGTTAGCAGGCAGGTTGCTACTGTCCGTTTGCTGCTAAAGGCTGGTGCAAGGACAGATGTCCAAGTGAGGCTGGGAGCATGGTCATGGGACATAGCTACAGGGGAAGAGTTGCGCGTTGGTGCAGGACTGGCTGAACCTTATCCCATTACTTGGTGTGCAGTGGAATACTTTGAAGCTAGTGGTTCAATCTTGCACTTGCTCCTCCAAAATATTTCCCCTAATACCCCTTATTGTGGAAGAACTCTCCTGCACCATGCCGTCCTATGTGGCAATGTAGGAGCTGTGCGTGCGCTACTACATTGTGGTGCCAATGTAGAATCGCCTGTTAAAACAACTGGGAAGACAATGTTCAATGCAATACACATGGCTGCCCGCCTTGGTTTGTCAGCAGTCCTTCAATGTTTGATTGATTCTGGTTGTGATATAAACTCCAAGACAGACTCTGGTGAGACAGCTCTAACGATCAGTGCAAAATATAAACATGAAGAGTGTCTCAGAGTATTGGCCATGGCTGGTGCTGATTTTGGCTTGGTCAATGTTGCTGCTCAGTCTGTCAGTTCAATTGCTGTCACAAACCGGTGGTCCCTTGGTTTTCAGGAGGCGTTGGTAGATATAATAAGAATCGGCAAGATACCTAAATCCAGCAACTTTTCTGTTTTCTCTCCCCTGATGTTTGTCGCTCAAGCTGGTGATATTGAGGCCTTGAAAGCTATAGTTGATTCAGGAGAATTTGAGATTGATTATCAGGATGATAAAGGTTTTAGTCCAGTCATGATCACTGCTTTGGAGGGTCACGTTGAAGCATTCCAGTTGCTGGTTTATGCAGGAGCTGATGTAAAGTTGTGCAACAAATCTGGTGAGACTGCAATTACTCTATCAGCATTAAGCCAAAACCGTGACCTATTTGAGAAGGTGATGCTTGAATTTGCACTCGAAAAGGGTAATCGCTATGCTGGGGGTTTCTATGCTCTACATTGTGCTGCACGTCGTGGGGACATGGATGCAGCCAAGTTGTTAACAGGTAGGGGTTACGATGTAAATGTCCCTGATGGAGATGGTTACACACCTCTCATGTTAGCAGCCAGGGAAGGCTATGGTACCATGTGTGAACTCTTGATCTCTCATGGGGCCAAGCTAGAGGTCATGAATGCTAAAGGCGAAACGCCACTCTCACTTGCGAGCAAAAGGGGTGGTTTGAAAAATGATGCTGAGCGTGTGATTCTGGATGAACTTGCTCGCAAGCTGGTGCTACGTGGGGCTCGGGTTCTCAAGCACACAAAGGGCGGGAAAGGAAGTCCTCATGAGAAAGATCTGAGAATGGTGGGGAGTGAAGGGGTGCTGCGATGGGGCAAGTCAAATCAGAGAAATGTGATATGCCGAGACGCTGAGGTGAGAGCTAGCCCGGCTTTTATCAGGAACAGGGGGAGCAAGAGTGATGTCAATGATGCTGGAGTGTTTAGGGTTGTGACTACCAAAAACAAGGAGGTGCACTTTGTGTGCGAAGGTGGGGTTGAAATGGCCGAGCTTTGGGTGAGGGGTATAACACTTGTGACCAAAGAGGCTGGCTATTTTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000902 GO:0000904 GO:0000910 GO:0001508 GO:0002028 GO:0003008 GO:0003254 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006888 GO:0006892 GO:0006893 GO:0006996 GO:0007009 GO:0007010 GO:0007016 GO:0007049 GO:0007154 GO:0007275 GO:0007399 GO:0007409 GO:0007528 GO:0008092 GO:0008104 GO:0008150 GO:0009653 GO:0009893 GO:0009986 GO:0009987 GO:0010035 GO:0010038 GO:0010256 GO:0010468 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010649 GO:0010650 GO:0010765 GO:0010959 GO:0010960 GO:0012505 GO:0014704 GO:0014731 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0016328 GO:0016528 GO:0016529 GO:0019222 GO:0019226 GO:0019228 GO:0022008 GO:0022402 GO:0022407 GO:0022409 GO:0022607 GO:0022898 GO:0023052 GO:0030016 GO:0030017 GO:0030018 GO:0030030 GO:0030054 GO:0030154 GO:0030155 GO:0030182 GO:0030315 GO:0030424 GO:0030425 GO:0030507 GO:0030674 GO:0031175 GO:0031594 GO:0031674 GO:0032026 GO:0032386 GO:0032388 GO:0032409 GO:0032410 GO:0032411 GO:0032412 GO:0032413 GO:0032414 GO:0032501 GO:0032502 GO:0032507 GO:0032879 GO:0032880 GO:0032989 GO:0032990 GO:0033036 GO:0033157 GO:0033267 GO:0033268 GO:0034110 GO:0034112 GO:0034613 GO:0034762 GO:0034763 GO:0034764 GO:0034765 GO:0034766 GO:0034767 GO:0035637 GO:0036477 GO:0042221 GO:0042383 GO:0042391 GO:0042592 GO:0042886 GO:0042995 GO:0043001 GO:0043005 GO:0043034 GO:0043194 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043266 GO:0043267 GO:0043269 GO:0043270 GO:0043271 GO:0043292 GO:0044085 GO:0044091 GO:0044092 GO:0044093 GO:0044291 GO:0044304 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044456 GO:0044459 GO:0044463 GO:0044464 GO:0045184 GO:0045185 GO:0045202 GO:0045211 GO:0045296 GO:0045760 GO:0045785 GO:0045838 GO:0046907 GO:0048193 GO:0048468 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050808 GO:0050839 GO:0050877 GO:0050896 GO:0051049 GO:0051050 GO:0051051 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051235 GO:0051301 GO:0051641 GO:0051649 GO:0051651 GO:0051716 GO:0055065 GO:0055080 GO:0060090 GO:0060255 GO:0060341 GO:0061024 GO:0061564 GO:0061640 GO:0061951 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071286 GO:0071702 GO:0071705 GO:0071709 GO:0071840 GO:0071944 GO:0072507 GO:0072657 GO:0072658 GO:0072659 GO:0072660 GO:0090087 GO:0090150 GO:0090313 GO:0090314 GO:0090316 GO:0097060 GO:0097447 GO:0097458 GO:0098590 GO:0098771 GO:0098794 GO:0098876 GO:0098900 GO:0098901 GO:0098902 GO:0099080 GO:0099081 GO:0099512 GO:0120025 GO:0120036 GO:0120038 GO:0120039 GO:1900825 GO:1900827 GO:1901016 GO:1901017 GO:1901379 GO:1901380 GO:1902259 GO:1902260 GO:1902305 GO:1902307 GO:1903047 GO:1903533 GO:1903817 GO:1903827 GO:1903829 GO:1904062 GO:1904063 GO:1904064 GO:1904181 GO:1904951 GO:1905475 GO:1905477 GO:1990778 GO:2000649 GO:2000651 GO:2001257 GO:2001258 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_3

Protein Analysis

667

Amino Acids

71.71

Weight (kDa)

6.51

Isoelectric Point (pI)

29.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 260 - 318 4e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 365 - 445 2.5e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 400 - 492 2e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 466 - 539 3.4e-13 Ankyrin repeats (3 copies)
Ank_4 PF13637 466 - 515 7.6e-09 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 427
Acc65I GGTACC 1 cut(s) 1523
AccB1I GGYRCC 2 cut(s) 731, 1523
AccB7I CCANNNNNTGG 2 cut(s) 576, 1240
AccI GTMKAC 1 cut(s) 399
AccII CGCG 2 cut(s) 95, 540
AciI CCGC 2 cut(s) 799, 1710
AclWI GGATC 2 cut(s) 133, 241
AcoI YGGCCR 2 cut(s) 930, 1944
AcsI RAATTY 2 cut(s) 1154, 1349
AcuI CTGAAG 1 cut(s) 350
AdeI CACNNNGTG 2 cut(s) 1415, 1921
AfaI GTAC 2 cut(s) 267, 1525
AfiI CCNNNNNNNGG 4 cut(s) 576, 659, 1240, 1953
AgeI ACCGGT 1 cut(s) 1002
AjiI CACGTC 1 cut(s) 1412
AjnI CCWGG 1 cut(s) 1508
Alw21I GWGCWC 2 cut(s) 412, 1917
Alw26I GTCTC 4 cut(s) 869, 923, 1280, 1800
Alw44I GTGCAC 2 cut(s) 408, 1913
AlwI GGATC 2 cut(s) 133, 241
AlwNI CAGNNNCTG 3 cut(s) 869, 1240, 1256
Ama87I CYCGRG 2 cut(s) 134, 1686
AoxI GGCC 7 cut(s) 45, 118, 251, 930, 1125, 1554, 1944
ApaLI GTGCAC 2 cut(s) 408, 1913
ApoI RAATTY 2 cut(s) 1154, 1349
ArsI GACNNNNNNTTYG 2 cut(s) 992, 1024
AsiGI ACCGGT 1 cut(s) 1002
Asp700I GAANNNNTTC 1 cut(s) 80
Asp718I GGTACC 1 cut(s) 1523
AspLEI GCGC 2 cut(s) 540, 718
AspS9I GGNCC 4 cut(s) 118, 252, 1008, 1554
AsuC2I CCSGG 2 cut(s) 32, 1829
AsuHPI GGTGA 6 cut(s) 884, 1127, 1295, 1351, 1828, 1969
AsuNHI GCTAGC 1 cut(s) 1823
AvaI CYCGRG 2 cut(s) 134, 1686
AvaII GGWCC 1 cut(s) 1008
BaeGI GKGCMC 2 cut(s) 412, 1917
BalI TGGCCA 1 cut(s) 932
BanI GGYRCC 2 cut(s) 731, 1523
BanII GRGCYC 1 cut(s) 1687
BbsI GAAGAC 1 cut(s) 773
Bbv12I GWGCWC 2 cut(s) 412, 1917
BbvCI CCTCAGC 1 cut(s) 1812
BccI CCATC 5 cut(s) 129, 264, 1469, 1475, 1764
BceAI ACGGC 1 cut(s) 668
BcgI CGANNNNNNTGC 4 cut(s) 326, 360, 389, 423
BciT130I CCWGG 1 cut(s) 1510
BciVI GTATCC 1 cut(s) 351
BclI TGATCA 1 cut(s) 1200
BcnI CCSGG 2 cut(s) 32, 1829
BcoDI GTCTC 4 cut(s) 869, 923, 1280, 1800
BfaI CTAG 3 cut(s) 603, 1562, 1824
BfmI CTRYAG 5 cut(s) 289, 403, 420, 522, 1137
BfuAI ACCTGC 1 cut(s) 427
BfuI GTATCC 1 cut(s) 351
BglII AGATCT 1 cut(s) 1735
BlpI GCTNAGC 1 cut(s) 1635
Bme1390I CCNGG 3 cut(s) 32, 1510, 1829
Bme18I GGWCC 1 cut(s) 1008
BmeT110I CYCGRG 2 cut(s) 134, 1686
BmgBI CACGTC 1 cut(s) 1412
BmgT120I GGNCC 4 cut(s) 118, 252, 1008, 1554
BmiI GGNNCC 5 cut(s) 254, 733, 1010, 1525, 1555
BmrFI CCNGG 3 cut(s) 32, 1510, 1829
BmrI ACTGGG 1 cut(s) 771
BmsI GCATC 6 cut(s) 167, 328, 1332, 1417, 1621, 1861
BmtI GCTAGC 1 cut(s) 1827
BmuI ACTGGG 1 cut(s) 771
BoxI GACNNNNGTC 1 cut(s) 482
BpiI GAAGAC 1 cut(s) 773
BpmI CTGGAG 2 cut(s) 174, 1896
Bpu10I CCTNAGC 1 cut(s) 1812
Bpu1102I GCTNAGC 1 cut(s) 1635
BpuEI CTTGAG 3 cut(s) 146, 1092, 1679
BpuMI CCSGG 2 cut(s) 32, 1829
BsaAI YACGTR 1 cut(s) 1679
BsaBI GATNNNNATC 1 cut(s) 69
BsaJI CCNNGG 5 cut(s) 85, 802, 933, 1012, 1509
BsaWI WCCGGW 1 cut(s) 1002
BsaXI ACNNNNNCTCC 6 cut(s) 51, 81, 1245, 1275, 1843, 1873
Bsc4I CCNNNNNNNGG 4 cut(s) 576, 659, 1240, 1953
Bse118I RCCGGY 1 cut(s) 1002
Bse1I ACTGG 5 cut(s) 417, 558, 766, 1193, 1234
Bse3DI GCAATG 1 cut(s) 703
Bse8I GATNNNNATC 1 cut(s) 69
BseBI CCWGG 1 cut(s) 1510
BseDI CCNNGG 5 cut(s) 85, 802, 933, 1012, 1509
BseGI GGATG 4 cut(s) 310, 1180, 1432, 1657
BseJI GATNNNNATC 1 cut(s) 69
BseLI CCNNNNNNNGG 4 cut(s) 576, 659, 1240, 1953
BseMI GCAATG 1 cut(s) 703
BseMII CTCAG 5 cut(s) 934, 986, 1626, 1730, 1803
BseNI ACTGG 5 cut(s) 417, 558, 766, 1193, 1234
BseRI GAGGAG 1 cut(s) 617
BseSI GKGCMC 2 cut(s) 412, 1917
BseYI CCCAGC 2 cut(s) 496, 1379
BsgI GTGCAG 6 cut(s) 366, 371, 567, 603, 659, 1392
Bsh1236I CGCG 2 cut(s) 95, 540
BshFI GGCC 7 cut(s) 47, 120, 253, 932, 1127, 1556, 1946
BshNI GGYRCC 2 cut(s) 731, 1523
BshTI ACCGGT 1 cut(s) 1002
BsiHKAI GWGCWC 2 cut(s) 412, 1917
BsiHKCI CYCGRG 2 cut(s) 134, 1686
BsiSI CCGG 4 cut(s) 32, 250, 1003, 1829
BslFI GGGAC 4 cut(s) 527, 994, 1433, 1454
BslI CCNNNNNNNGG 4 cut(s) 576, 659, 1240, 1953
BsmAI GTCTC 4 cut(s) 869, 923, 1280, 1800
BsmBI CGTCTC 1 cut(s) 1800
BsmFI GGGAC 4 cut(s) 527, 994, 1433, 1454
BsmI GAATGC 2 cut(s) 1229, 1579
BsnI GGCC 7 cut(s) 47, 120, 253, 932, 1127, 1556, 1946
BsoBI CYCGRG 2 cut(s) 134, 1686
Bsp1286I GDGCHC 3 cut(s) 412, 1687, 1917
Bsp1407I TGTACA 1 cut(s) 265
Bsp143I GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
Bsp1720I GCTNAGC 1 cut(s) 1635
Bsp19I CCATGG 1 cut(s) 933
Bsp68I TCGCGA 1 cut(s) 95
BspACI CCGC 2 cut(s) 799, 1710
BspANI GGCC 7 cut(s) 47, 120, 253, 932, 1127, 1556, 1946
BspCNI CTCAG 5 cut(s) 933, 985, 1627, 1731, 1804
BspFNI CGCG 2 cut(s) 95, 540
BspHI TCATGA 4 cut(s) 321, 1197, 1569, 1726
BspLI GGNNCC 5 cut(s) 254, 733, 1010, 1525, 1555
BspMAI CTGCAG 2 cut(s) 293, 424
BspMI ACCTGC 1 cut(s) 427
BspOI GCTAGC 1 cut(s) 1827
BspPI GGATC 2 cut(s) 133, 241
BspQI GCTCTTC 1 cut(s) 86
BspT107I GGYRCC 2 cut(s) 731, 1523
BsrDI GCAATG 1 cut(s) 703
BsrFI RCCGGY 1 cut(s) 1002
BsrGI TGTACA 1 cut(s) 265
BsrI ACTGG 5 cut(s) 417, 558, 766, 1193, 1234
BssAI RCCGGY 1 cut(s) 1002
BssECI CCNNGG 5 cut(s) 85, 802, 933, 1012, 1509
BssMI GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
BssT1I CCWWGG 3 cut(s) 802, 933, 1012
Bst2UI CCWGG 1 cut(s) 1510
Bst4CI ACNGT 4 cut(s) 7, 404, 448, 1322
Bst6I CTCTTC 3 cut(s) 86, 525, 906
BstAUI TGTACA 1 cut(s) 265
BstBAI YACGTR 1 cut(s) 1679
BstC8I GCNNGC 9 cut(s) 286, 434, 714, 799, 1606, 1663, 1667, 1825, 1990
BstDEI CTNAG 6 cut(s) 375, 920, 972, 1635, 1739, 1812
BstDSI CCRYGG 2 cut(s) 85, 933
BstF5I GGATG 4 cut(s) 310, 1180, 1432, 1657
BstFNI CGCG 2 cut(s) 95, 540
BstHHI GCGC 2 cut(s) 540, 718
BstKTI GATC 6 cut(s) 141, 249, 891, 1203, 1545, 1738
BstMAI GTCTC 4 cut(s) 869, 923, 1280, 1800
BstMBI GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
BstMWI GCNNNNNNNGC 8 cut(s) 101, 269, 385, 416, 554, 713, 1133, 1829
BstNI CCWGG 1 cut(s) 1510
BstNSI RCATGY 2 cut(s) 272, 288
BstPAI GACNNNNGTC 1 cut(s) 482
BstSCI CCNGG 3 cut(s) 30, 1508, 1827
BstSFI CTRYAG 5 cut(s) 289, 403, 420, 522, 1137
BstSLI GKGCMC 2 cut(s) 412, 1917
BstUI CGCG 2 cut(s) 95, 540
BstV2I GAAGAC 1 cut(s) 773
BstX2I RGATCY 2 cut(s) 138, 1735
BstYI RGATCY 2 cut(s) 138, 1735
BsuI GTATCC 1 cut(s) 351
BsuRI GGCC 7 cut(s) 47, 120, 253, 932, 1127, 1556, 1946
BtgI CCRYGG 2 cut(s) 85, 933
BtgZI GCGATG 1 cut(s) 1783
BtrI CACGTC 1 cut(s) 1412
BtsCI GGATG 4 cut(s) 310, 1180, 1432, 1657
BtsI GCAGTG 2 cut(s) 591, 1203
BtsIMutI CAGTG 4 cut(s) 410, 591, 898, 1203
BtuMI TCGCGA 1 cut(s) 95
BveI ACCTGC 1 cut(s) 427
Cac8I GCNNGC 9 cut(s) 286, 434, 714, 799, 1606, 1663, 1667, 1825, 1990
CaiI CAGNNNCTG 3 cut(s) 869, 1240, 1256
CciI TCATGA 4 cut(s) 321, 1197, 1569, 1726
CfoI GCGC 2 cut(s) 540, 718
Cfr10I RCCGGY 1 cut(s) 1002
Cfr13I GGNCC 4 cut(s) 118, 252, 1008, 1554
CseI GACGC 1 cut(s) 1817
Csp6I GTAC 2 cut(s) 266, 1524
CspAI ACCGGT 1 cut(s) 1002
CspCI CAANNNNNGTGG 2 cut(s) 1597, 1632
CviQI GTAC 2 cut(s) 266, 1524
DdeI CTNAG 6 cut(s) 375, 920, 972, 1635, 1739, 1812
DpnI GATC 6 cut(s) 140, 248, 890, 1202, 1544, 1737
DpnII GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
DraIII CACNNNGTG 2 cut(s) 1415, 1921
EaeI YGGCCR 2 cut(s) 930, 1944
Eam1104I CTCTTC 3 cut(s) 86, 525, 906
EarI CTCTTC 3 cut(s) 86, 525, 906
Eco130I CCWWGG 3 cut(s) 802, 933, 1012
Eco147I AGGCCT 1 cut(s) 1127
Eco24I GRGCYC 1 cut(s) 1687
Eco47I GGWCC 1 cut(s) 1008
Eco57I CTGAAG 1 cut(s) 350
Eco88I CYCGRG 2 cut(s) 134, 1686
EcoRII CCWGG 1 cut(s) 1508
EcoT14I CCWWGG 3 cut(s) 802, 933, 1012
EcoT38I GRGCYC 1 cut(s) 1687
ErhI CCWWGG 3 cut(s) 802, 933, 1012
Esp3I CGTCTC 1 cut(s) 1800
FaqI GGGAC 4 cut(s) 527, 994, 1433, 1454
FauI CCCGC 2 cut(s) 806, 1703
FbaI TGATCA 1 cut(s) 1200
FblI GTMKAC 1 cut(s) 399
FokI GGATG 4 cut(s) 317, 1187, 1439, 1664
FriOI GRGCYC 1 cut(s) 1687
FspBI CTAG 3 cut(s) 603, 1562, 1824
GlaI GCGC 2 cut(s) 539, 717
GsaI CCCAGC 2 cut(s) 500, 1383
GsuI CTGGAG 2 cut(s) 174, 1896
HaeIII GGCC 7 cut(s) 47, 120, 253, 932, 1127, 1556, 1946
HapII CCGG 4 cut(s) 32, 250, 1003, 1829
HgaI GACGC 1 cut(s) 1817
HhaI GCGC 2 cut(s) 540, 718
Hin6I GCGC 2 cut(s) 538, 716
HinP1I GCGC 2 cut(s) 538, 716
HincII GTYRAC 3 cut(s) 313, 400, 1443
HindII GTYRAC 3 cut(s) 313, 400, 1443
HinfI GANTC 7 cut(s) 130, 743, 836, 866, 1047, 1145, 1645
HpaI GTTAAC 1 cut(s) 1443
HpaII CCGG 4 cut(s) 32, 250, 1003, 1829
HphI GGTGA 6 cut(s) 884, 1127, 1295, 1351, 1828, 1969
Hpy166II GTNNAC 7 cut(s) 37, 313, 400, 410, 1443, 1535, 1915
Hpy188I TCNGA 5 cut(s) 75, 241, 923, 1740, 1788
Hpy8I GTNNAC 7 cut(s) 37, 313, 400, 410, 1443, 1535, 1915
Hpy99I CGWCG 2 cut(s) 401, 1416
HpyAV CCTTC 6 cut(s) 390, 830, 1330, 1508, 1751, 1922
HpyCH4III ACNGT 4 cut(s) 7, 404, 448, 1322
HpyCH4IV ACGT 5 cut(s) 219, 396, 1221, 1411, 1678
HpyF10VI GCNNNNNNNGC 8 cut(s) 101, 269, 385, 416, 554, 713, 1133, 1829
HpyF3I CTNAG 6 cut(s) 375, 920, 972, 1635, 1739, 1812
HpySE526I ACGT 5 cut(s) 219, 396, 1221, 1411, 1678
HspAI GCGC 2 cut(s) 538, 716
KpnI GGTACC 1 cut(s) 1527
Ksp22I TGATCA 1 cut(s) 1200
KspAI GTTAAC 1 cut(s) 1443
Kzo9I GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
LguI GCTCTTC 1 cut(s) 86
LmnI GCTCC 8 cut(s) 59, 155, 223, 500, 630, 704, 1253, 1851
LweI GCATC 6 cut(s) 167, 328, 1332, 1417, 1621, 1861
MaeI CTAG 3 cut(s) 603, 1562, 1824
MaeII ACGT 5 cut(s) 219, 396, 1221, 1411, 1678
MaeIII GTNAC 7 cut(s) 994, 1217, 1322, 1454, 1484, 1891, 1975
MalI GATC 6 cut(s) 140, 248, 890, 1202, 1544, 1737
MboI GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
MboII GAAGA 5 cut(s) 73, 542, 675, 778, 923
MfeI CAATTG 1 cut(s) 987
MflI RGATCY 2 cut(s) 138, 1735
MhlI GDGCHC 3 cut(s) 412, 1687, 1917
MlsI TGGCCA 1 cut(s) 932
MluCI AATT 4 cut(s) 987, 1154, 1293, 1349
MluNI TGGCCA 1 cut(s) 932
MlyI GAGTC 1 cut(s) 860
MmeI TCCRAC 1 cut(s) 168
Mox20I TGGCCA 1 cut(s) 932
MroXI GAANNNNTTC 1 cut(s) 80
MscI TGGCCA 1 cut(s) 932
MseI TTAA 4 cut(s) 147, 753, 1310, 1442
MslI CAYNNNNRTG 4 cut(s) 207, 320, 508, 729
Msp20I TGGCCA 1 cut(s) 932
MspI CCGG 4 cut(s) 32, 250, 1003, 1829
MspR9I CCNGG 3 cut(s) 32, 1510, 1829
MunI CAATTG 1 cut(s) 987
Mva1269I GAATGC 2 cut(s) 1229, 1579
MvaI CCWGG 1 cut(s) 1510
MvnI CGCG 2 cut(s) 95, 540
MwoI GCNNNNNNNGC 8 cut(s) 101, 269, 385, 416, 554, 713, 1133, 1829
NciI CCSGG 2 cut(s) 32, 1829
NcoI CCATGG 1 cut(s) 933
NdeII GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
NheI GCTAGC 1 cut(s) 1823
NlaIV GGNNCC 5 cut(s) 254, 733, 1010, 1525, 1555
NmeAIII GCCGAG 3 cut(s) 73, 1829, 1972
NmuCI GTSAC 5 cut(s) 994, 1217, 1322, 1891, 1975
NruI TCGCGA 1 cut(s) 95
NspI RCATGY 2 cut(s) 272, 288
PaeI GCATGC 1 cut(s) 288
PaeR7I CTCGAG 1 cut(s) 134
PagI TCATGA 4 cut(s) 321, 1197, 1569, 1726
PceI AGGCCT 1 cut(s) 1127
PciSI GCTCTTC 1 cut(s) 86
PctI GAATGC 2 cut(s) 1229, 1579
PdmI GAANNNNTTC 1 cut(s) 80
PfeI GAWTC 6 cut(s) 130, 743, 836, 1047, 1145, 1645
PflMI CCANNNNNTGG 2 cut(s) 576, 1240
PinAI ACCGGT 1 cut(s) 1002
PleI GAGTC 1 cut(s) 860
PpsI GAGTC 1 cut(s) 860
Ppu21I YACGTR 1 cut(s) 1679
PshAI GACNNNNGTC 1 cut(s) 482
Psp6I CCWGG 1 cut(s) 1508
PspFI CCCAGC 2 cut(s) 496, 1379
PspGI CCWGG 1 cut(s) 1508
PspN4I GGNNCC 5 cut(s) 254, 733, 1010, 1525, 1555
PspPI GGNCC 4 cut(s) 118, 252, 1008, 1554
PstI CTGCAG 2 cut(s) 293, 424
PstNI CAGNNNCTG 3 cut(s) 869, 1240, 1256
PsuI RGATCY 2 cut(s) 138, 1735
RruI TCGCGA 1 cut(s) 95
RsaI GTAC 2 cut(s) 267, 1525
RsaNI GTAC 2 cut(s) 266, 1524
RseI CAYNNNNRTG 4 cut(s) 207, 320, 508, 729
SalI GTCGAC 1 cut(s) 398
SapI GCTCTTC 1 cut(s) 86
SaqAI TTAA 4 cut(s) 147, 753, 1310, 1442
Sau3AI GATC 6 cut(s) 138, 246, 888, 1200, 1542, 1735
Sau96I GGNCC 4 cut(s) 118, 252, 1008, 1554
SchI GAGTC 1 cut(s) 860
ScrFI CCNGG 3 cut(s) 32, 1510, 1829
SduI GDGCHC 3 cut(s) 412, 1687, 1917
SfaNI GCATC 6 cut(s) 167, 328, 1332, 1417, 1621, 1861
SfcI CTRYAG 5 cut(s) 289, 403, 420, 522, 1137
Sfr274I CTCGAG 1 cut(s) 134
SinI GGWCC 1 cut(s) 1008
SlaI CTCGAG 1 cut(s) 134
SmiMI CAYNNNNRTG 4 cut(s) 207, 320, 508, 729
SmlI CTYRAG 4 cut(s) 125, 134, 1107, 1694
SmoI CTYRAG 4 cut(s) 125, 134, 1107, 1694
SphI GCATGC 1 cut(s) 288
Sse9I AATT 4 cut(s) 987, 1154, 1293, 1349
SseBI AGGCCT 1 cut(s) 1127
SsiI CCGC 2 cut(s) 799, 1710
SspI AATATT 1 cut(s) 637
SspMI CTAG 3 cut(s) 603, 1562, 1824
StuI AGGCCT 1 cut(s) 1127
StyD4I CCNGG 3 cut(s) 30, 1508, 1827
StyI CCWWGG 3 cut(s) 802, 933, 1012
TaaI ACNGT 4 cut(s) 7, 404, 448, 1322
TaiI ACGT 5 cut(s) 222, 399, 1224, 1414, 1681
TaqI TCGA 5 cut(s) 135, 336, 351, 399, 1359
TasI AATT 4 cut(s) 987, 1154, 1293, 1349
TatI WGTACW 1 cut(s) 265
TfiI GAWTC 6 cut(s) 130, 743, 836, 1047, 1145, 1645
Tru1I TTAA 4 cut(s) 147, 753, 1310, 1442
Tru9I TTAA 4 cut(s) 147, 753, 1310, 1442
TscAI CASTG 4 cut(s) 417, 591, 898, 1210
TseFI GTSAC 5 cut(s) 994, 1217, 1322, 1891, 1975
Tsp45I GTSAC 5 cut(s) 994, 1217, 1322, 1891, 1975
TspDTI ATGAA 4 cut(s) 338, 924, 1586, 1668
TspGWI ACGGA 2 cut(s) 74, 440
TspRI CASTG 4 cut(s) 417, 591, 898, 1210
Van91I CCANNNNNTGG 2 cut(s) 576, 1240
VneI GTGCAC 2 cut(s) 408, 1913
VpaK11BI GGWCC 1 cut(s) 1008
XapI RAATTY 2 cut(s) 1154, 1349
XceI RCATGY 2 cut(s) 272, 288
XhoI CTCGAG 1 cut(s) 134
XmiI GTMKAC 1 cut(s) 399
XmnI GAANNNNTTC 1 cut(s) 80
XspI CTAG 3 cut(s) 603, 1562, 1824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.