FvH4_6g53080

Ankyrin repeats (many copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0002610
Physical Location & Seq
Reverse (-)
38978021 .. 38982720
4700 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g53080.t1

Sequence Viewer

Length: 2253 bp
ATGACGGTTTTCTCCGGCAGACAGGTCTTCCCGGTGGACTGCGAGGCCGAGGTTTCGCAACGCCTTCTCGAAGCCTCGCTCGCCGGAGATCTGAAGTCCGCGACCGAGCTCGCCGCCGATCCTTTCGTCGACGTCAACTTCGTCGGCGCCGTGTGCCTGAGATCGAGGAGGACGGAGGTGGTGCTGAGGGACGAGTCGGCGAGCGAGGTCCGAGTTGGTTACGAGGAGTTCAAAACTGACGTCACGGCGCTTTTTGTGGCGGTTCATGGTGGAAATGTTGAGCTGGTGAAGAAATTGCTGAGCATTGGAGCTGATGTAAATCAGAAGCTCTTCCGGGGCTTTGCGACAACAGCAGCAGTGAGAGAGGGCCATCTTGAGATTCTCAAGATCCTACTTAAAGCTGGAGCATCTCAACCAGCTTGTGAAGAAGCTTTGTTGGAGGCAAGTTGTCATGGAAATGCTAAATTCGTGGAGCTGCTTATGTCCTCTGATTTGATCAGGCCCCATCTTGCTGTGCATGCTATTGTCATAGCATGCTGTAGGGGGTTTGTGGATGTGGTGGACAATCTCATGAAGTGTGGTGTGGATGCAAGTGCTGTCGATAGGATACTGCTTCAGTCATCTAAGCCTTCTCTGCACACCAATGTCGACTGTAGTGCACTCGTAGCTGCAGTTGTTAGCAGGCAGGTTGCTACTGTCCGTTTGCTGCTAAAGGCTGGTGCAAGGACAGATATCCAAGTGAGGCTGGGAGCATGGTCATGGGACATTGCTACTGGGGAAGAGTTGCGCGTTGGTGCAGGACTGGCTGAACCTTATCCCATTACTTGGTGTGCAGTGGAATACTTTGAAGCTAGTGGTTCAATCTTGCATTTGCTCCTCCAAAATATTTCTCCTAATACCCCTTACTGTGGAAGAACTCTCCTGCACCATGCCATCCTATGCGGCAATGTAGGAGCTGTGCATGCGCTCCTACATTGTGGCGCCAATGTAGAATCCCCCGTTAAAACAACTGGGAGGACAATGTTTAATCCAATACACATGGCTGCACGCCTTGGCTTGTCAACAGTCCTTCAATGTTTGATCGACTCTGGTTGTGATATAAACTCCAAGACAGACTCTGGTGAGACAGCTCTAATGATCTGTGCAAAATATAAACAGCAAGAGTGTCTCAGAGTATTGGTCATGGCTGGTGCTGATTTTGGCTTGGTCAATGTTGCTGCTCAGTCTGTCAGTTCAATTTCTGTCACAAATCGGTGGTCCCTTGGATTTCAGGAGGTATTGATAGGTATAATAAGAACCGGCAAGATACCTAAATCCAGCAACTTTTCTGTTTTCTCTCCCCTAATGTTTGTCGCTCAAGCTGGTGATATTGAGGCCTTAAAAGCTATAGTTGATTCAGGAGAATTTGAGATTGATTATCAGGATGATAAAGGTTTTAGTCCAGTTATGATCACTGCTTTGGAGGGTCATGTCGAAGCATTCCGGTTGCTGGTTTATGCAGGAGCTGATGTAAAGTTGTCCAACAAATCTGGTGAGACGGCAATCACTCTATCAGCATTGAGCCAAAACCGTGACCTATTTGAGAAGGTGATGCTTGAATATGCACTCGAAAAGGGCAATCGATATGCTGGGGGTTTCTATGCTCTACATTGTGCTGCACGTCGTGGGGACATGGACGCAGCCAAGTTGTTAACAAGTAGGGGTTACGATGTAAATGTCCCTGATGGAGATGGTTATACACCTCTCATGTTAGCAGCCAGGGAAGGCTATGGTTCCATGTGTGAACTCTTGATCTCTCATGGGGCCAAGCTAGAGGTCATGAATGCTAAAGGCGAAACACCACTCTCACTTGCGAGGAAAAAGGGTGGTCTGAAAAATGATGCTGAGCGTGTGATACTAGATGAACTTGCTCGCAAGCTGGTGCTTCGTGGGGCTCGGGTTCTCAAGCACACAAAGGGTGGTAAAGGAAGCCCTCATGAGAAAGATCTGAGAATGGTGGGGAGTGCAGGGGTGCTACGATGGGGCAAGTCGAATCAGAGAAATGTGATATGCCGAGAGGCTGAGGTGAGTGCTAGCCCAGCTTTTATCAGGAACAGGCGGAGCAAGAGTGATGTTAGTGAAGCCGGAGTGTTTAGGGTTGTGACTGTCAAGAACAAGGAGGTGCATTTTGTGTGCGAAGGTGGGGTTGAAATGGCCGAGCTTTGGGTGAGAGGTATAACGCTTGTGACCAAAGAGGCCGGCTATTTTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000902 GO:0000904 GO:0000910 GO:0001508 GO:0002028 GO:0003008 GO:0003254 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006888 GO:0006892 GO:0006893 GO:0006996 GO:0007009 GO:0007010 GO:0007016 GO:0007049 GO:0007154 GO:0007275 GO:0007399 GO:0007409 GO:0007528 GO:0008092 GO:0008104 GO:0008150 GO:0009653 GO:0009893 GO:0009986 GO:0009987 GO:0010035 GO:0010038 GO:0010256 GO:0010468 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010649 GO:0010650 GO:0010765 GO:0010959 GO:0010960 GO:0012505 GO:0014704 GO:0014731 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0016328 GO:0016528 GO:0016529 GO:0019222 GO:0019226 GO:0019228 GO:0022008 GO:0022402 GO:0022407 GO:0022409 GO:0022607 GO:0022898 GO:0023052 GO:0030016 GO:0030017 GO:0030018 GO:0030030 GO:0030054 GO:0030154 GO:0030155 GO:0030182 GO:0030315 GO:0030424 GO:0030425 GO:0030507 GO:0030674 GO:0031175 GO:0031594 GO:0031674 GO:0032026 GO:0032386 GO:0032388 GO:0032409 GO:0032410 GO:0032411 GO:0032412 GO:0032413 GO:0032414 GO:0032501 GO:0032502 GO:0032507 GO:0032879 GO:0032880 GO:0032989 GO:0032990 GO:0033036 GO:0033157 GO:0033267 GO:0033268 GO:0034110 GO:0034112 GO:0034613 GO:0034762 GO:0034763 GO:0034764 GO:0034765 GO:0034766 GO:0034767 GO:0035637 GO:0036477 GO:0042221 GO:0042383 GO:0042391 GO:0042592 GO:0042886 GO:0042995 GO:0043001 GO:0043005 GO:0043034 GO:0043194 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043266 GO:0043267 GO:0043269 GO:0043270 GO:0043271 GO:0043292 GO:0044085 GO:0044091 GO:0044092 GO:0044093 GO:0044291 GO:0044304 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044456 GO:0044459 GO:0044463 GO:0044464 GO:0045184 GO:0045185 GO:0045202 GO:0045211 GO:0045296 GO:0045760 GO:0045785 GO:0045838 GO:0046907 GO:0048193 GO:0048468 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050808 GO:0050839 GO:0050877 GO:0050896 GO:0051049 GO:0051050 GO:0051051 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051235 GO:0051301 GO:0051641 GO:0051649 GO:0051651 GO:0051716 GO:0055065 GO:0055080 GO:0060090 GO:0060255 GO:0060341 GO:0061024 GO:0061564 GO:0061640 GO:0061951 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071286 GO:0071702 GO:0071705 GO:0071709 GO:0071840 GO:0071944 GO:0072507 GO:0072657 GO:0072658 GO:0072659 GO:0072660 GO:0090087 GO:0090150 GO:0090313 GO:0090314 GO:0090316 GO:0097060 GO:0097447 GO:0097458 GO:0098590 GO:0098771 GO:0098794 GO:0098876 GO:0098900 GO:0098901 GO:0098902 GO:0099080 GO:0099081 GO:0099512 GO:0120025 GO:0120036 GO:0120038 GO:0120039 GO:1900825 GO:1900827 GO:1901016 GO:1901017 GO:1901379 GO:1901380 GO:1902259 GO:1902260 GO:1902305 GO:1902307 GO:1903047 GO:1903533 GO:1903817 GO:1903827 GO:1903829 GO:1904062 GO:1904063 GO:1904064 GO:1904181 GO:1904951 GO:1905475 GO:1905477 GO:1990778 GO:2000649 GO:2000651 GO:2001257 GO:2001258 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_3

Protein Analysis

751

Amino Acids

80.94

Weight (kDa)

7.0

Isoelectric Point (pI)

31.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 80 - 137 1.2e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 84 - 163 2.2e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 343 - 401 3.1e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 448 - 529 1.3e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 549 - 622 1.5e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 549 - 598 1.8e-09 Ankyrin repeats (many copies)
Ank PF00023 577 - 608 7.2e-06 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 135, 243
Acc36I ACCTGC 1 cut(s) 676
AccB1I GGYRCC 2 cut(s) 146, 980
AccB7I CCANNNNNTGG 1 cut(s) 825
AccI GTMKAC 2 cut(s) 129, 648
AccII CGCG 2 cut(s) 101, 789
AciI CCGC 5 cut(s) 99, 114, 260, 942, 2098
AclWI GGATC 2 cut(s) 113, 382
AcoI YGGCCR 1 cut(s) 2193
AcsI RAATTY 2 cut(s) 464, 1403
AcuI CTGAAG 2 cut(s) 113, 599
AcyI GRCGYC 4 cut(s) 132, 147, 240, 981
AdeI CACNNNGTG 1 cut(s) 1664
AfiI CCNNNNNNNGG 4 cut(s) 825, 908, 1489, 2202
AgsI TTSAA 7 cut(s) 232, 848, 861, 1073, 1236, 1598, 2189
AjiI CACGTC 1 cut(s) 1661
AjnI CCWGG 1 cut(s) 1757
Alw21I GWGCWC 2 cut(s) 111, 661
Alw26I GTCTC 3 cut(s) 1118, 1172, 1529
Alw44I GTGCAC 1 cut(s) 657
AlwI GGATC 2 cut(s) 113, 382
AlwNI CAGNNNCTG 2 cut(s) 1118, 1505
Ama87I CYCGRG 1 cut(s) 1935
AoxI GGCC 7 cut(s) 45, 367, 500, 1374, 1803, 2193, 2235
ApaLI GTGCAC 1 cut(s) 657
ApeKI GCWGC 9 cut(s) 353, 475, 668, 706, 1043, 1217, 1655, 1679, 1754
ApoI RAATTY 2 cut(s) 464, 1403
ArsI GACNNNNNNTTYG 6 cut(s) 122, 154, 225, 257, 1241, 1273
Asp700I GAANNNNTTC 1 cut(s) 329
AspLEI GCGC 5 cut(s) 149, 250, 789, 967, 983
AspS9I GGNCC 5 cut(s) 208, 367, 501, 1257, 1803
AsuC2I CCSGG 2 cut(s) 32, 335
AsuHPI GGTGA 7 cut(s) 298, 1133, 1376, 1544, 1600, 2077, 2218
AsuNHI GCTAGC 1 cut(s) 2072
AvaI CYCGRG 1 cut(s) 1935
AvaII GGWCC 2 cut(s) 208, 1257
BaeGI GKGCMC 1 cut(s) 661
BanI GGYRCC 2 cut(s) 146, 980
BanII GRGCYC 2 cut(s) 111, 1936
BbsI GAAGAC 1 cut(s) 19
Bbv12I GWGCWC 2 cut(s) 111, 661
BbvCI CCTCAGC 2 cut(s) 185, 2061
BbvI GCAGC 9 cut(s) 365, 462, 655, 693, 1030, 1204, 1642, 1691, 1766
BccI CCATC 6 cut(s) 378, 513, 941, 1718, 1724, 2013
BceAI ACGGC 3 cut(s) 134, 261, 1554
BcgI CGANNNNNNTGC 2 cut(s) 638, 672
BciT130I CCWGG 1 cut(s) 1759
BciVI GTATCC 1 cut(s) 600
BclI TGATCA 2 cut(s) 495, 1449
BcnI CCSGG 2 cut(s) 32, 335
BcoDI GTCTC 3 cut(s) 1118, 1172, 1529
BfaI CTAG 4 cut(s) 852, 1811, 1898, 2073
BfmI CTRYAG 4 cut(s) 538, 652, 669, 1386
BfoI RGCGCY 3 cut(s) 150, 251, 984
BfuAI ACCTGC 1 cut(s) 676
BfuI GTATCC 1 cut(s) 600
BglII AGATCT 2 cut(s) 88, 1984
BlpI GCTNAGC 2 cut(s) 299, 1884
Bme1390I CCNGG 3 cut(s) 32, 335, 1759
Bme18I GGWCC 2 cut(s) 208, 1257
BmeT110I CYCGRG 1 cut(s) 1935
BmgBI CACGTC 1 cut(s) 1661
BmgT120I GGNCC 5 cut(s) 208, 367, 501, 1257, 1803
BmiI GGNNCC 6 cut(s) 148, 503, 982, 1259, 1774, 1804
BmrFI CCNGG 3 cut(s) 32, 335, 1759
BmrI ACTGGG 2 cut(s) 783, 1020
BmsI GCATC 4 cut(s) 416, 577, 1581, 1870
BmtI GCTAGC 1 cut(s) 2076
BmuI ACTGGG 2 cut(s) 783, 1020
BpiI GAAGAC 1 cut(s) 19
BpmI CTGGAG 1 cut(s) 423
Bpu10I CCTNAGC 2 cut(s) 185, 2061
Bpu1102I GCTNAGC 2 cut(s) 299, 1884
BpuEI CTTGAG 4 cut(s) 368, 395, 1341, 1928
BpuMI CCSGG 2 cut(s) 32, 335
Bsa29I ATCGAT 1 cut(s) 1621
BsaBI GATNNNNATC 1 cut(s) 318
BsaHI GRCGYC 4 cut(s) 132, 147, 240, 981
BsaJI CCNNGG 5 cut(s) 48, 334, 1051, 1261, 1758
BsaWI WCCGGW 1 cut(s) 1482
BsaXI ACNNNNNCTCC 6 cut(s) 300, 330, 1494, 1524, 2092, 2122
Bsc4I CCNNNNNNNGG 4 cut(s) 825, 908, 1489, 2202
Bse118I RCCGGY 2 cut(s) 1298, 2237
Bse1I ACTGG 4 cut(s) 778, 807, 1015, 1442
Bse3DI GCAATG 2 cut(s) 765, 952
Bse8I GATNNNNATC 1 cut(s) 318
BseBI CCWGG 1 cut(s) 1759
BseCI ATCGAT 1 cut(s) 1621
BseDI CCNNGG 5 cut(s) 48, 334, 1051, 1261, 1758
BseGI GGATG 4 cut(s) 559, 592, 933, 1429
BseJI GATNNNNATC 1 cut(s) 318
BseLI CCNNNNNNNGG 4 cut(s) 825, 908, 1489, 2202
BseMI GCAATG 2 cut(s) 765, 952
BseMII CTCAG 8 cut(s) 149, 176, 290, 1183, 1235, 1875, 1979, 2052
BseNI ACTGG 4 cut(s) 778, 807, 1015, 1442
BseRI GAGGAG 3 cut(s) 181, 239, 866
BseSI GKGCMC 1 cut(s) 661
BseXI GCAGC 9 cut(s) 365, 462, 655, 693, 1030, 1204, 1642, 1691, 1766
BseYI CCCAGC 3 cut(s) 745, 1628, 2077
BsgI GTGCAG 7 cut(s) 620, 816, 852, 908, 1029, 1641, 2025
Bsh1236I CGCG 2 cut(s) 101, 789
Bsh1285I CGRYCG 1 cut(s) 105
BshFI GGCC 7 cut(s) 47, 369, 502, 1376, 1805, 2195, 2237
BshNI GGYRCC 2 cut(s) 146, 980
BshVI ATCGAT 1 cut(s) 1621
BsiEI CGRYCG 1 cut(s) 105
BsiHKAI GWGCWC 2 cut(s) 111, 661
BsiHKCI CYCGRG 1 cut(s) 1935
BsiSI CCGG 8 cut(s) 15, 32, 84, 334, 1299, 1483, 2124, 2238
BslFI GGGAC 5 cut(s) 203, 776, 1243, 1682, 1703
BslI CCNNNNNNNGG 4 cut(s) 825, 908, 1489, 2202
BsmAI GTCTC 3 cut(s) 1118, 1172, 1529
BsmBI CGTCTC 1 cut(s) 1529
BsmFI GGGAC 5 cut(s) 203, 776, 1243, 1682, 1703
BsmI GAATGC 2 cut(s) 1478, 1828
BsnI GGCC 7 cut(s) 47, 369, 502, 1376, 1805, 2195, 2237
BsoBI CYCGRG 1 cut(s) 1935
Bsp1286I GDGCHC 3 cut(s) 111, 661, 1936
Bsp1720I GCTNAGC 2 cut(s) 299, 1884
BspACI CCGC 5 cut(s) 99, 114, 260, 942, 2098
BspANI GGCC 7 cut(s) 47, 369, 502, 1376, 1805, 2195, 2237
BspCNI CTCAG 8 cut(s) 150, 177, 291, 1182, 1234, 1876, 1980, 2053
BspDI ATCGAT 1 cut(s) 1621
BspFNI CGCG 2 cut(s) 101, 789
BspHI TCATGA 3 cut(s) 570, 1818, 1975
BspLI GGNNCC 6 cut(s) 148, 503, 982, 1259, 1774, 1804
BspMAI CTGCAG 1 cut(s) 673
BspMI ACCTGC 1 cut(s) 676
BspOI GCTAGC 1 cut(s) 2076
BspPI GGATC 2 cut(s) 113, 382
BspQI GCTCTTC 1 cut(s) 335
BspT107I GGYRCC 2 cut(s) 146, 980
BsrDI GCAATG 2 cut(s) 765, 952
BsrFI RCCGGY 2 cut(s) 1298, 2237
BsrI ACTGG 4 cut(s) 778, 807, 1015, 1442
BssAI RCCGGY 2 cut(s) 1298, 2237
BssECI CCNNGG 5 cut(s) 48, 334, 1051, 1261, 1758
BssNI GRCGYC 4 cut(s) 132, 147, 240, 981
BssT1I CCWWGG 2 cut(s) 1051, 1261
Bst2UI CCWGG 1 cut(s) 1759
Bst4CI ACNGT 7 cut(s) 7, 653, 697, 908, 1066, 1571, 2146
Bst6I CTCTTC 2 cut(s) 335, 774
BstACI GRCGYC 4 cut(s) 132, 147, 240, 981
BstDEI CTNAG 9 cut(s) 158, 185, 299, 624, 1169, 1221, 1884, 1988, 2061
BstF5I GGATG 4 cut(s) 559, 592, 933, 1429
BstFNI CGCG 2 cut(s) 101, 789
BstH2I RGCGCY 3 cut(s) 150, 251, 984
BstHHI GCGC 5 cut(s) 149, 250, 789, 967, 983
BstMAI GTCTC 3 cut(s) 1118, 1172, 1529
BstMCI CGRYCG 1 cut(s) 105
BstNI CCWGG 1 cut(s) 1759
BstNSI RCATGY 3 cut(s) 521, 537, 965
BstSCI CCNGG 3 cut(s) 30, 333, 1757
BstSFI CTRYAG 4 cut(s) 538, 652, 669, 1386
BstSLI GKGCMC 1 cut(s) 661
BstUI CGCG 2 cut(s) 101, 789
BstV1I GCAGC 9 cut(s) 365, 462, 655, 693, 1030, 1204, 1642, 1691, 1766
BstV2I GAAGAC 1 cut(s) 19
BstX2I RGATCY 3 cut(s) 88, 387, 1984
BstYI RGATCY 3 cut(s) 88, 387, 1984
Bsu15I ATCGAT 1 cut(s) 1621
BsuI GTATCC 1 cut(s) 600
BsuRI GGCC 7 cut(s) 47, 369, 502, 1376, 1805, 2195, 2237
BsuTUI ATCGAT 1 cut(s) 1621
BtrI CACGTC 1 cut(s) 1661
BtsCI GGATG 4 cut(s) 559, 592, 933, 1429
BtsI GCAGTG 3 cut(s) 363, 840, 1452
BtsIMutI CAGTG 3 cut(s) 363, 840, 1452
BveI ACCTGC 1 cut(s) 676
CaiI CAGNNNCTG 2 cut(s) 1118, 1505
CciI TCATGA 3 cut(s) 570, 1818, 1975
CfoI GCGC 5 cut(s) 149, 250, 789, 967, 983
Cfr10I RCCGGY 2 cut(s) 1298, 2237
Cfr13I GGNCC 5 cut(s) 208, 367, 501, 1257, 1803
ClaI ATCGAT 1 cut(s) 1621
CseI GACGC 1 cut(s) 1685
DdeI CTNAG 9 cut(s) 158, 185, 299, 624, 1169, 1221, 1884, 1988, 2061
DinI GGCGCC 2 cut(s) 148, 982
DraIII CACNNNGTG 1 cut(s) 1664
EaeI YGGCCR 1 cut(s) 2193
Eam1104I CTCTTC 2 cut(s) 335, 774
EarI CTCTTC 2 cut(s) 335, 774
EciI GGCGGA 1 cut(s) 2113
Ecl136II GAGCTC 1 cut(s) 109
Eco130I CCWWGG 2 cut(s) 1051, 1261
Eco147I AGGCCT 1 cut(s) 1376
Eco24I GRGCYC 2 cut(s) 111, 1936
Eco32I GATATC 1 cut(s) 733
Eco47I GGWCC 2 cut(s) 208, 1257
Eco53kI GAGCTC 1 cut(s) 109
Eco57I CTGAAG 2 cut(s) 113, 599
Eco88I CYCGRG 1 cut(s) 1935
EcoICRI GAGCTC 1 cut(s) 109
EcoO109I RGGNCCY 1 cut(s) 501
EcoRII CCWGG 1 cut(s) 1757
EcoRV GATATC 1 cut(s) 733
EcoT14I CCWWGG 2 cut(s) 1051, 1261
EcoT38I GRGCYC 2 cut(s) 111, 1936
EgeI GGCGCC 2 cut(s) 148, 982
EheI GGCGCC 2 cut(s) 148, 982
ErhI CCWWGG 2 cut(s) 1051, 1261
Esp3I CGTCTC 1 cut(s) 1529
FaqI GGGAC 5 cut(s) 203, 776, 1243, 1682, 1703
FbaI TGATCA 2 cut(s) 495, 1449
FblI GTMKAC 2 cut(s) 129, 648
FokI GGATG 4 cut(s) 566, 599, 920, 1436
FriOI GRGCYC 2 cut(s) 111, 1936
FspBI CTAG 4 cut(s) 852, 1811, 1898, 2073
GlaI GCGC 5 cut(s) 148, 249, 788, 966, 982
GsaI CCCAGC 3 cut(s) 749, 1632, 2081
GsuI CTGGAG 1 cut(s) 423
HaeII RGCGCY 3 cut(s) 150, 251, 984
HaeIII GGCC 7 cut(s) 47, 369, 502, 1376, 1805, 2195, 2237
HapII CCGG 8 cut(s) 15, 32, 84, 334, 1299, 1483, 2124, 2238
HgaI GACGC 1 cut(s) 1685
HhaI GCGC 5 cut(s) 149, 250, 789, 967, 983
Hin1I GRCGYC 4 cut(s) 132, 147, 240, 981
Hin6I GCGC 5 cut(s) 147, 248, 787, 965, 981
HinP1I GCGC 5 cut(s) 147, 248, 787, 965, 981
HincII GTYRAC 5 cut(s) 130, 136, 649, 1062, 1692
HindII GTYRAC 5 cut(s) 130, 136, 649, 1062, 1692
HindIII AAGCTT 1 cut(s) 429
HinfI GANTC 7 cut(s) 194, 379, 992, 1085, 1115, 1394, 2032
HpaI GTTAAC 1 cut(s) 1692
HpaII CCGG 8 cut(s) 15, 32, 84, 334, 1299, 1483, 2124, 2238
HphI GGTGA 7 cut(s) 298, 1133, 1376, 1544, 1600, 2077, 2218
Hpy166II GTNNAC 9 cut(s) 37, 130, 136, 562, 649, 659, 1062, 1692, 1784
Hpy188I TCNGA 8 cut(s) 93, 212, 324, 490, 1172, 1872, 1989, 2037
Hpy8I GTNNAC 9 cut(s) 37, 130, 136, 562, 649, 659, 1062, 1692, 1784
Hpy99I CGWCG 4 cut(s) 131, 134, 146, 1665
HpyAV CCTTC 6 cut(s) 74, 639, 1079, 1579, 1757, 2171
HpyCH4III ACNGT 7 cut(s) 7, 653, 697, 908, 1066, 1571, 2146
HpyCH4IV ACGT 3 cut(s) 132, 240, 1660
HpyF3I CTNAG 9 cut(s) 158, 185, 299, 624, 1169, 1221, 1884, 1988, 2061
HpySE526I ACGT 3 cut(s) 132, 240, 1660
Hsp92I GRCGYC 4 cut(s) 132, 147, 240, 981
HspAI GCGC 5 cut(s) 147, 248, 787, 965, 981
KasI GGCGCC 2 cut(s) 146, 980
KroI GCCGGC 1 cut(s) 2237
KroNI GCCGGC 1 cut(s) 2239
Ksp22I TGATCA 2 cut(s) 495, 1449
KspAI GTTAAC 1 cut(s) 1692
LguI GCTCTTC 1 cut(s) 335
LmnI GCTCC 9 cut(s) 308, 404, 472, 749, 879, 953, 972, 1502, 2100
Lsp1109I GCAGC 9 cut(s) 365, 462, 655, 693, 1030, 1204, 1642, 1691, 1766
LweI GCATC 4 cut(s) 416, 577, 1581, 1870
MaeI CTAG 4 cut(s) 852, 1811, 1898, 2073
MaeII ACGT 3 cut(s) 132, 240, 1660
MaeIII GTNAC 7 cut(s) 218, 241, 1243, 1571, 1703, 2140, 2224
MboII GAAGA 6 cut(s) 19, 301, 322, 437, 791, 924
MflI RGATCY 3 cut(s) 88, 387, 1984
MhlI GDGCHC 3 cut(s) 111, 661, 1936
MluCI AATT 4 cut(s) 293, 464, 1236, 1403
Mly113I GGCGCC 2 cut(s) 147, 981
MlyI GAGTC 3 cut(s) 203, 1079, 1109
MmeI TCCRAC 2 cut(s) 417, 1545
MroNI GCCGGC 1 cut(s) 2237
MroXI GAANNNNTTC 1 cut(s) 329
MseI TTAA 5 cut(s) 396, 1002, 1026, 1379, 1691
MslI CAYNNNNRTG 3 cut(s) 456, 642, 757
MspI CCGG 8 cut(s) 15, 32, 84, 334, 1299, 1483, 2124, 2238
MspR9I CCNGG 3 cut(s) 32, 335, 1759
Mva1269I GAATGC 2 cut(s) 1478, 1828
MvaI CCWGG 1 cut(s) 1759
MvnI CGCG 2 cut(s) 101, 789
NaeI GCCGGC 1 cut(s) 2239
NarI GGCGCC 2 cut(s) 147, 981
NciI CCSGG 2 cut(s) 32, 335
NgoMIV GCCGGC 1 cut(s) 2237
NheI GCTAGC 1 cut(s) 2072
NlaIV GGNNCC 6 cut(s) 148, 503, 982, 1259, 1774, 1804
NmeAIII GCCGAG 3 cut(s) 73, 2078, 2221
NmuCI GTSAC 5 cut(s) 241, 1243, 1571, 2140, 2224
NspI RCATGY 3 cut(s) 521, 537, 965
PaeI GCATGC 3 cut(s) 521, 537, 965
PagI TCATGA 3 cut(s) 570, 1818, 1975
PceI AGGCCT 1 cut(s) 1376
PciSI GCTCTTC 1 cut(s) 335
PcsI WCGNNNNNNNCGW 2 cut(s) 138, 147
PctI GAATGC 2 cut(s) 1478, 1828
PdiI GCCGGC 1 cut(s) 2239
PdmI GAANNNNTTC 1 cut(s) 329
PfeI GAWTC 4 cut(s) 379, 992, 1394, 2032
PflMI CCANNNNNTGG 1 cut(s) 825
PleI GAGTC 3 cut(s) 202, 1079, 1109
PluTI GGCGCC 2 cut(s) 150, 984
PpsI GAGTC 3 cut(s) 202, 1079, 1109
Psp124BI GAGCTC 1 cut(s) 111
Psp6I CCWGG 1 cut(s) 1757
PspFI CCCAGC 3 cut(s) 745, 1628, 2077
PspGI CCWGG 1 cut(s) 1757
PspN4I GGNNCC 6 cut(s) 148, 503, 982, 1259, 1774, 1804
PspPI GGNCC 5 cut(s) 208, 367, 501, 1257, 1803
PstI CTGCAG 1 cut(s) 673
PstNI CAGNNNCTG 2 cut(s) 1118, 1505
PsuI RGATCY 3 cut(s) 88, 387, 1984
RseI CAYNNNNRTG 3 cut(s) 456, 642, 757
SacI GAGCTC 1 cut(s) 111
SalI GTCGAC 2 cut(s) 128, 647
SapI GCTCTTC 1 cut(s) 335
SaqAI TTAA 5 cut(s) 396, 1002, 1026, 1379, 1691
Sau96I GGNCC 5 cut(s) 208, 367, 501, 1257, 1803
SchI GAGTC 3 cut(s) 203, 1079, 1109
ScrFI CCNGG 3 cut(s) 32, 335, 1759
SduI GDGCHC 3 cut(s) 111, 661, 1936
SfaNI GCATC 4 cut(s) 416, 577, 1581, 1870
SfcI CTRYAG 4 cut(s) 538, 652, 669, 1386
SfoI GGCGCC 2 cut(s) 148, 982
SgrDI CGTCGACG 1 cut(s) 128
SinI GGWCC 2 cut(s) 208, 1257
SmiMI CAYNNNNRTG 3 cut(s) 456, 642, 757
SmlI CTYRAG 4 cut(s) 374, 383, 1356, 1943
SmoI CTYRAG 4 cut(s) 374, 383, 1356, 1943
SphI GCATGC 3 cut(s) 521, 537, 965
Sse9I AATT 4 cut(s) 293, 464, 1236, 1403
SseBI AGGCCT 1 cut(s) 1376
SsiI CCGC 5 cut(s) 99, 114, 260, 942, 2098
SspDI GGCGCC 2 cut(s) 146, 980
SspI AATATT 1 cut(s) 886
SspMI CTAG 4 cut(s) 852, 1811, 1898, 2073
SstI GAGCTC 1 cut(s) 111
StuI AGGCCT 1 cut(s) 1376
StyD4I CCNGG 3 cut(s) 30, 333, 1757
StyI CCWWGG 2 cut(s) 1051, 1261
TaaI ACNGT 7 cut(s) 7, 653, 697, 908, 1066, 1571, 2146
TaiI ACGT 3 cut(s) 135, 243, 1663
TaqII GACCGA 1 cut(s) 119
TasI AATT 4 cut(s) 293, 464, 1236, 1403
TauI GCSGC 2 cut(s) 116, 945
TfiI GAWTC 4 cut(s) 379, 992, 1394, 2032
Tru1I TTAA 5 cut(s) 396, 1002, 1026, 1379, 1691
Tru9I TTAA 5 cut(s) 396, 1002, 1026, 1379, 1691
TscAI CASTG 3 cut(s) 363, 840, 1459
TseFI GTSAC 5 cut(s) 241, 1243, 1571, 2140, 2224
TseI GCWGC 9 cut(s) 353, 475, 668, 706, 1043, 1217, 1655, 1679, 1754
Tsp45I GTSAC 5 cut(s) 241, 1243, 1571, 2140, 2224
TspDTI ATGAA 4 cut(s) 254, 587, 1835, 1917
TspGWI ACGGA 2 cut(s) 188, 689
TspRI CASTG 3 cut(s) 363, 840, 1459
Van91I CCANNNNNTGG 1 cut(s) 825
VneI GTGCAC 1 cut(s) 657
VpaK11BI GGWCC 2 cut(s) 208, 1257
XapI RAATTY 2 cut(s) 464, 1403
XceI RCATGY 3 cut(s) 521, 537, 965
XmiI GTMKAC 2 cut(s) 129, 648
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 4 cut(s) 852, 1811, 1898, 2073
ZraI GACGTC 2 cut(s) 133, 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.