Prupe.3G302900_v2.0.a1

Ankyrin repeats (many copies)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0002610
Physical Location & Seq
Reverse (-)
26652925 .. 26658204
5280 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G302900.1

Sequence Viewer

Length: 2268 bp
ATGACCGTCTTCTCCGGCAAGCAGGTGTTTCCAGTGGACTATGAGGCCGAGGTTTCTCAACGCCTTCTCGAAGCTTCCCTCTCCGGCGATCTGAAATCGGCGTTGGAGTGTATAGCCGATCCGTTTGTGGACGTCAACTTCGTCGGTGCTGTGTGCCTCAAAACAAAGAAGACCGAGTTGTTATTGCACGACGAATCGGCGAGCGAAGTCCGCGTCGACTACGAGGAGTTCAAAACCGACGTCACGGCTCTTTTTCTAGCCGTTCATGCTGGAAGTGTAGCTTTGGTGAAGAAACTACTGAGCGTTGGAGCTGATGTAAATCAGAAACTCTTCAGAGGCTTCGCGACAACAGCAGCAGTGAGGGAGGGCCACCTTGAGATTCTAGAGATCCTACTGAAAGCTGGAGCATCTCAACCAGCTTGTGAGGAAGCTCTGCTGGAGGCAAGCTGTCATGGAGATGCCAGGCTCGTGGAGCTGCTTATAGCTTCTGATTTGATCCGGCCCCATATTGCTGTGCATGCTATTGTCACAGCAAGCTGCAGGGGGTTTGTTGATGTGGTGGACACTTTCATGAAGTGTGGTGTGGATGCAAGTGCAACTGATAGGATGCTGCTTCAGTCATCTAAGCCGTCGCTGCACACTAATGTTCACTGTAGCGCACTTGCAGCTGCAGTTGTTAGTAGGCAGGTCTCGATTGTTCGTTTGCTGCTACAGGCTGGTGCGAGGACAGATGTGACAGTGAGGCTGGGAGCATGGTCATGGGACACAGCCACAGGGGAAGAATTGCGGGTAGGGGCAGGACTGGCAGAGCCTTATCCCATTACCTGGTGTGCAGTGGAGTATTTTGAAGCAAGTGGTTCTATCTTGCACATGCTCCTCCAACATATTTCCCCTGATACCCCTCATTGTGGAAGAACTCTCCTGCACCATGCTATCCTATGTGGTAATGTAGGAGCCGTTCATGTGCTCTTACGTTGTGGTGCCAATGTAGAATCACCTGTTAAAACAACTGGAAAGACCATGTTTAATCCAATACACATGGCTGCCCGGCTTGGCTTGTCAACAATTGTTCAGTGTTTAATCGACTCTGGATGTGATATAAACTCCAAGACAGATTCTGGTGAGACAGCTCTAATGATCTGTGCAAAATATAAGCATGAAGAGTGTCTCAGAGTATTGGCCATGGCTGGTGCTGATTTTGGCTTGGTTAATGTTGCTGGTCAGTCCGTCAGCTCAATTGCTGTGACAAATCGCTGGTCCCTTGGTTTTCAGCAAGCGTTGATACTTGTAATACGAGCTGGAAAGATTCCAAGGTCCAGCAACTTTTCTGTGTTCTCTTCCCTAATGTTTGCAGCTCAAGCCGGTGACATGGAGGCCTTGAAAGCTGTAGTTGGTTCAGGAGAATTTGACATTGATTATCAGGATGAAAAAGGTTTCTCGGCAGTCATGATCACTGCTTTGAAGGGTTATGTGGAAGCATTCCGGTTGCTGGTTTATGCAGGGGCTGATGTAAAGTTGTGTAACAAGTCTGGTGAGACTGCAATTACGCTATCTGAATTAAGCCAAAACCGTGACCTATTTGAGAAGGTAATGCTCGAATATGCACTAGAAAAGGGCAATCGCTATGCTGGAGGGTTCTATGCTCTGCATTGTGCAGCACGTCGCAGGGACATTGATGCGGTCAAATTGTTAACAAGTAGAGGCTACGATGTGAATGTCCCTGATGGAGATGGTTACACTCCACTCATGTTAGCGGCTAGGGAAGGCTATGGTCCCATGTGTGAACTCTTGATCTCTCATGGGGCAAATTTGGATGAGAAGAATGCCAAAGGCGAAACACCACTCTCACTAGCAAGGAAGAGTGGTTGCAGTACCAAAAATGACGCGGAGTGTGTGATACTGGATGAGCTTGCTCGCAGGGTGGTGCTAGGTGGAGCCCATGTTTGGAAGCATACCAAGGGAGGGAAAGGAAGCCCTCATGGGAAAGAGATGAGAATGGTGGGAGCCATAGGGGTGCTGCGCTGGGGGAAGTCGAACCGGAGAAATGTGATATGCCGGGATGCAGAGGTGGGGCCCAGCCCAGCTTTTAGGAGGAATAGGAGGAGCAAGAGTGATGCGGATGAAGCTGGATTGTTTAGGGTGGTGACTACGAAGAACAAGGAGGTGCATTTTGTGTGTGAAGGTGGGGTTGAAACCGCTGAGCTTTGGGTGAGGGGCATAAAGCTTGTGACAAAGGAGGCTGTTTTGGGTAATAAGAGGGAGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000902 GO:0000904 GO:0000910 GO:0001508 GO:0002028 GO:0003008 GO:0003254 GO:0003674 GO:0005198 GO:0005200 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005829 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006888 GO:0006892 GO:0006893 GO:0006996 GO:0007009 GO:0007010 GO:0007016 GO:0007049 GO:0007154 GO:0007275 GO:0007399 GO:0007409 GO:0007528 GO:0008092 GO:0008104 GO:0008150 GO:0009653 GO:0009893 GO:0009986 GO:0009987 GO:0010035 GO:0010038 GO:0010256 GO:0010468 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010649 GO:0010650 GO:0010765 GO:0010959 GO:0010960 GO:0012505 GO:0014704 GO:0014731 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0016328 GO:0016528 GO:0016529 GO:0019222 GO:0019226 GO:0019228 GO:0022008 GO:0022402 GO:0022407 GO:0022409 GO:0022607 GO:0022898 GO:0023052 GO:0030016 GO:0030017 GO:0030018 GO:0030030 GO:0030054 GO:0030154 GO:0030155 GO:0030182 GO:0030315 GO:0030424 GO:0030425 GO:0030507 GO:0030674 GO:0031175 GO:0031594 GO:0031674 GO:0032026 GO:0032386 GO:0032388 GO:0032409 GO:0032410 GO:0032411 GO:0032412 GO:0032413 GO:0032414 GO:0032501 GO:0032502 GO:0032507 GO:0032879 GO:0032880 GO:0032989 GO:0032990 GO:0033036 GO:0033157 GO:0033267 GO:0033268 GO:0034110 GO:0034112 GO:0034613 GO:0034762 GO:0034763 GO:0034764 GO:0034765 GO:0034766 GO:0034767 GO:0035637 GO:0036477 GO:0042221 GO:0042383 GO:0042391 GO:0042592 GO:0042886 GO:0042995 GO:0043001 GO:0043005 GO:0043034 GO:0043194 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043266 GO:0043267 GO:0043269 GO:0043270 GO:0043271 GO:0043292 GO:0044085 GO:0044091 GO:0044092 GO:0044093 GO:0044291 GO:0044304 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044456 GO:0044459 GO:0044463 GO:0044464 GO:0045184 GO:0045185 GO:0045202 GO:0045211 GO:0045296 GO:0045760 GO:0045785 GO:0045838 GO:0046907 GO:0048193 GO:0048468 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050808 GO:0050839 GO:0050877 GO:0050896 GO:0051049 GO:0051050 GO:0051051 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051235 GO:0051301 GO:0051641 GO:0051649 GO:0051651 GO:0051716 GO:0055065 GO:0055080 GO:0060090 GO:0060255 GO:0060341 GO:0061024 GO:0061564 GO:0061640 GO:0061951 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070727 GO:0070887 GO:0071241 GO:0071248 GO:0071286 GO:0071702 GO:0071705 GO:0071709 GO:0071840 GO:0071944 GO:0072507 GO:0072657 GO:0072658 GO:0072659 GO:0072660 GO:0090087 GO:0090150 GO:0090313 GO:0090314 GO:0090316 GO:0097060 GO:0097447 GO:0097458 GO:0098590 GO:0098771 GO:0098794 GO:0098876 GO:0098900 GO:0098901 GO:0098902 GO:0099080 GO:0099081 GO:0099512 GO:0120025 GO:0120036 GO:0120038 GO:0120039 GO:1900825 GO:1900827 GO:1901016 GO:1901017 GO:1901379 GO:1901380 GO:1902259 GO:1902260 GO:1902305 GO:1902307 GO:1903047 GO:1903533 GO:1903817 GO:1903827 GO:1903829 GO:1904062 GO:1904063 GO:1904064 GO:1904181 GO:1904951 GO:1905475 GO:1905477 GO:1990778 GO:2000649 GO:2000651 GO:2001257 GO:2001258 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_3

Protein Analysis

756

Amino Acids

81.44

Weight (kDa)

6.75

Isoelectric Point (pI)

31.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 13
AatII GACGTC 2 cut(s) 135, 243
Acc36I ACCTGC 2 cut(s) 13, 676
AccB1I GGYRCC 1 cut(s) 980
AccB7I CCANNNNNTGG 1 cut(s) 825
AccI GTMKAC 1 cut(s) 216
AccII CGCG 3 cut(s) 213, 344, 1886
AciI CCGC 7 cut(s) 211, 787, 1679, 1754, 1886, 2117, 2196
AclWI GGATC 3 cut(s) 113, 382, 490
AcoI YGGCCR 1 cut(s) 1179
AcsI RAATTY 2 cut(s) 1403, 1807
AcuI CTGAAG 2 cut(s) 316, 599
AcyI GRCGYC 2 cut(s) 132, 240
AfaI GTAC 1 cut(s) 1873
AfiI CCNNNNNNNGG 5 cut(s) 825, 908, 1489, 1944, 1962
AgsI TTSAA 5 cut(s) 232, 848, 1381, 1462, 2192
AjiI CACGTC 1 cut(s) 1661
AjnI CCWGG 2 cut(s) 461, 824
AjuI GAANNNNNNNTTGG 2 cut(s) 86, 118
Alw21I GWGCWC 1 cut(s) 969
Alw26I GTCTC 4 cut(s) 694, 1118, 1172, 1529
AlwI GGATC 3 cut(s) 113, 382, 490
AlwNI CAGNNNCTG 2 cut(s) 1118, 1505
AoxI GGCC 6 cut(s) 45, 367, 500, 1179, 1374, 2072
ApaI GGGCCC 1 cut(s) 2076
ApoI RAATTY 2 cut(s) 1403, 1807
ArsI GACNNNNNNTTYG 8 cut(s) 122, 154, 198, 225, 230, 257, 1241, 1273
Asp700I GAANNNNTTC 1 cut(s) 329
AspLEI GCGC 2 cut(s) 659, 2022
AspS9I GGNCC 7 cut(s) 367, 501, 1257, 1314, 1772, 2072, 2073
AsuC2I CCSGG 2 cut(s) 1048, 2057
AsuHPI GGTGA 7 cut(s) 298, 987, 1133, 1376, 1544, 2155, 2221
AvaII GGWCC 3 cut(s) 1257, 1314, 1772
BaeGI GKGCMC 1 cut(s) 2076
BalI TGGCCA 1 cut(s) 1181
BanI GGYRCC 1 cut(s) 980
BanII GRGCYC 2 cut(s) 1939, 2076
BauI CACGAG 1 cut(s) 467
BbsI GAAGAC 1 cut(s) 176
Bbv12I GWGCWC 1 cut(s) 969
BccI CCATC 2 cut(s) 1718, 1724
BceAI ACGGC 4 cut(s) 245, 261, 613, 941
BciT130I CCWGG 2 cut(s) 463, 826
BclI TGATCA 1 cut(s) 1449
BcnI CCSGG 2 cut(s) 1048, 2057
BcoDI GTCTC 4 cut(s) 694, 1118, 1172, 1529
BfaI CTAG 6 cut(s) 257, 383, 1607, 1758, 1850, 1928
BfmI CTRYAG 5 cut(s) 538, 652, 669, 710, 1386
BfuAI ACCTGC 2 cut(s) 13, 676
BlpI GCTNAGC 1 cut(s) 2199
Bme1390I CCNGG 4 cut(s) 463, 826, 1048, 2057
Bme18I GGWCC 3 cut(s) 1257, 1314, 1772
BmgBI CACGTC 1 cut(s) 1661
BmgT120I GGNCC 7 cut(s) 367, 501, 1257, 1314, 1772, 2072, 2073
BmiI GGNNCC 9 cut(s) 503, 955, 982, 1259, 1774, 1936, 2005, 2073, 2074
BmrFI CCNGG 4 cut(s) 463, 826, 1048, 2057
BmsI GCATC 7 cut(s) 416, 448, 577, 597, 1666, 2050, 2104
BpiI GAAGAC 1 cut(s) 176
BpmI CTGGAG 3 cut(s) 423, 458, 1650
Bpu1102I GCTNAGC 1 cut(s) 2199
BpuEI CTTGAG 2 cut(s) 395, 1341
BpuMI CCSGG 2 cut(s) 1048, 2057
BsaBI GATNNNNATC 1 cut(s) 318
BsaHI GRCGYC 2 cut(s) 132, 240
BsaI GGTCTC 1 cut(s) 694
BsaJI CCNNGG 5 cut(s) 48, 1182, 1261, 1310, 1956
BsaWI WCCGGW 2 cut(s) 1482, 2037
BsaXI ACNNNNNCTCC 6 cut(s) 300, 330, 1926, 1956, 2095, 2125
Bsc4I CCNNNNNNNGG 5 cut(s) 825, 908, 1489, 1944, 1962
Bse118I RCCGGY 1 cut(s) 1361
Bse1I ACTGG 4 cut(s) 32, 807, 1015, 1905
Bse8I GATNNNNATC 1 cut(s) 318
BseBI CCWGG 2 cut(s) 463, 826
BseDI CCNNGG 5 cut(s) 48, 1182, 1261, 1310, 1956
BseGI GGATG 8 cut(s) 592, 612, 1097, 1429, 1819, 1909, 2065, 2125
BseJI GATNNNNATC 1 cut(s) 318
BseLI CCNNNNNNNGG 5 cut(s) 825, 908, 1489, 1944, 1962
BseMII CTCAG 3 cut(s) 290, 1183, 2190
BseNI ACTGG 4 cut(s) 32, 807, 1015, 1905
BseRI GAGGAG 3 cut(s) 239, 866, 2116
BseSI GKGCMC 1 cut(s) 2076
BseYI CCCAGC 4 cut(s) 745, 2022, 2075, 2080
BsgI GTGCAG 4 cut(s) 620, 852, 908, 1674
Bsh1236I CGCG 3 cut(s) 213, 344, 1886
BshFI GGCC 6 cut(s) 47, 369, 502, 1181, 1376, 2074
BshNI GGYRCC 1 cut(s) 980
BsiHKAI GWGCWC 1 cut(s) 969
BsiSI CCGG 8 cut(s) 15, 84, 499, 1048, 1362, 1483, 2038, 2056
BslFI GGGAC 5 cut(s) 776, 1243, 1682, 1703, 1758
BslI CCNNNNNNNGG 5 cut(s) 825, 908, 1489, 1944, 1962
BsmAI GTCTC 4 cut(s) 694, 1118, 1172, 1529
BsmFI GGGAC 5 cut(s) 776, 1243, 1682, 1703, 1758
BsmI GAATGC 2 cut(s) 1478, 1828
BsnI GGCC 6 cut(s) 47, 369, 502, 1181, 1376, 2074
Bso31I GGTCTC 1 cut(s) 694
Bsp120I GGGCCC 1 cut(s) 2072
Bsp1286I GDGCHC 3 cut(s) 969, 1939, 2076
Bsp143I GATC 7 cut(s) 88, 118, 387, 495, 1137, 1449, 1791
Bsp1720I GCTNAGC 1 cut(s) 2199
Bsp19I CCATGG 1 cut(s) 1182
Bsp68I TCGCGA 1 cut(s) 344
BspACI CCGC 7 cut(s) 211, 787, 1679, 1754, 1886, 2117, 2196
BspANI GGCC 6 cut(s) 47, 369, 502, 1181, 1376, 2074
BspCNI CTCAG 3 cut(s) 291, 1182, 2191
BspFNI CGCG 3 cut(s) 213, 344, 1886
BspHI TCATGA 3 cut(s) 570, 1446, 2264
BspLI GGNNCC 9 cut(s) 503, 955, 982, 1259, 1774, 1936, 2005, 2073, 2074
BspMAI CTGCAG 2 cut(s) 542, 673
BspMI ACCTGC 2 cut(s) 13, 676
BspPI GGATC 3 cut(s) 113, 382, 490
BspT107I GGYRCC 1 cut(s) 980
BspTNI GGTCTC 1 cut(s) 694
BsrFI RCCGGY 1 cut(s) 1361
BsrI ACTGG 4 cut(s) 32, 807, 1015, 1905
BssAI RCCGGY 1 cut(s) 1361
BssECI CCNNGG 5 cut(s) 48, 1182, 1261, 1310, 1956
BssMI GATC 7 cut(s) 88, 118, 387, 495, 1137, 1449, 1791
BssNI GRCGYC 2 cut(s) 132, 240
BssSI CACGAG 1 cut(s) 467
BssT1I CCWWGG 4 cut(s) 1182, 1261, 1310, 1956
Bst2BI CACGAG 1 cut(s) 467
Bst2UI CCWGG 2 cut(s) 463, 826
Bst4CI ACNGT 4 cut(s) 7, 653, 739, 1571
Bst6I CTCTTC 4 cut(s) 335, 1155, 1342, 1853
BstACI GRCGYC 2 cut(s) 132, 240
BstC8I GCNNGC 8 cut(s) 20, 202, 445, 519, 535, 1275, 1911, 1915
BstDEI CTNAG 4 cut(s) 299, 624, 1169, 2199
BstDSI CCRYGG 1 cut(s) 1182
BstF5I GGATG 8 cut(s) 592, 612, 1097, 1429, 1819, 1909, 2065, 2125
BstFNI CGCG 3 cut(s) 213, 344, 1886
BstHHI GCGC 2 cut(s) 659, 2022
BstKTI GATC 7 cut(s) 91, 121, 390, 498, 1140, 1452, 1794
BstMAI GTCTC 4 cut(s) 694, 1118, 1172, 1529
BstMBI GATC 7 cut(s) 88, 118, 387, 495, 1137, 1449, 1791
BstNI CCWGG 2 cut(s) 463, 826
BstNSI RCATGY 2 cut(s) 521, 874
BstSCI CCNGG 4 cut(s) 461, 824, 1046, 2055
BstSFI CTRYAG 5 cut(s) 538, 652, 669, 710, 1386
BstSLI GKGCMC 1 cut(s) 2076
BstUI CGCG 3 cut(s) 213, 344, 1886
BstV2I GAAGAC 1 cut(s) 176
BstX2I RGATCY 1 cut(s) 387
BstXI CCANNNNNNTGG 1 cut(s) 469
BstYI RGATCY 1 cut(s) 387
BsuRI GGCC 6 cut(s) 47, 369, 502, 1181, 1376, 2074
BtgI CCRYGG 1 cut(s) 1182
BtrI CACGTC 1 cut(s) 1661
BtsCI GGATG 8 cut(s) 592, 612, 1097, 1429, 1819, 1909, 2065, 2125
BtsI GCAGTG 3 cut(s) 363, 840, 1452
BtsIMutI CAGTG 7 cut(s) 39, 363, 649, 744, 840, 1079, 1452
BtuMI TCGCGA 1 cut(s) 344
BveI ACCTGC 2 cut(s) 13, 676
Cac8I GCNNGC 8 cut(s) 20, 202, 445, 519, 535, 1275, 1911, 1915
CaiI CAGNNNCTG 2 cut(s) 1118, 1505
CciI TCATGA 3 cut(s) 570, 1446, 2264
CfoI GCGC 2 cut(s) 659, 2022
Cfr10I RCCGGY 1 cut(s) 1361
Cfr13I GGNCC 7 cut(s) 367, 501, 1257, 1314, 1772, 2072, 2073
CseI GACGC 2 cut(s) 202, 1892
CsiI ACCWGGT 1 cut(s) 824
Csp6I GTAC 1 cut(s) 1872
CviQI GTAC 1 cut(s) 1872
DdeI CTNAG 4 cut(s) 299, 624, 1169, 2199
DpnI GATC 7 cut(s) 90, 120, 389, 497, 1139, 1451, 1793
DpnII GATC 7 cut(s) 88, 118, 387, 495, 1137, 1449, 1791
EaeI YGGCCR 1 cut(s) 1179
Eam1104I CTCTTC 4 cut(s) 335, 1155, 1342, 1853
EarI CTCTTC 4 cut(s) 335, 1155, 1342, 1853
Eco130I CCWWGG 4 cut(s) 1182, 1261, 1310, 1956
Eco147I AGGCCT 1 cut(s) 1376
Eco24I GRGCYC 2 cut(s) 1939, 2076
Eco31I GGTCTC 1 cut(s) 694
Eco47I GGWCC 3 cut(s) 1257, 1314, 1772
Eco57I CTGAAG 2 cut(s) 316, 599
EcoO109I RGGNCCY 1 cut(s) 2072
EcoRII CCWGG 2 cut(s) 461, 824
EcoT14I CCWWGG 4 cut(s) 1182, 1261, 1310, 1956
EcoT38I GRGCYC 2 cut(s) 1939, 2076
ErhI CCWWGG 4 cut(s) 1182, 1261, 1310, 1956
FalI AAGNNNNNCTT 2 cut(s) 265, 297
FaqI GGGAC 5 cut(s) 776, 1243, 1682, 1703, 1758
FauI CCCGC 1 cut(s) 780
FbaI TGATCA 1 cut(s) 1449
FblI GTMKAC 1 cut(s) 216
FokI GGATG 8 cut(s) 599, 619, 1104, 1436, 1826, 1916, 2072, 2132
FriOI GRGCYC 2 cut(s) 1939, 2076
FspBI CTAG 6 cut(s) 257, 383, 1607, 1758, 1850, 1928
GlaI GCGC 2 cut(s) 658, 2021
GsaI CCCAGC 4 cut(s) 749, 2026, 2079, 2084
GsuI CTGGAG 3 cut(s) 423, 458, 1650
HaeIII GGCC 6 cut(s) 47, 369, 502, 1181, 1376, 2074
HapII CCGG 8 cut(s) 15, 84, 499, 1048, 1362, 1483, 2038, 2056
HgaI GACGC 2 cut(s) 202, 1892
HhaI GCGC 2 cut(s) 659, 2022
Hin1I GRCGYC 2 cut(s) 132, 240
Hin6I GCGC 2 cut(s) 657, 2020
HinP1I GCGC 2 cut(s) 657, 2020
HincII GTYRAC 4 cut(s) 136, 217, 1062, 1692
HindII GTYRAC 4 cut(s) 136, 217, 1062, 1692
HindIII AAGCTT 2 cut(s) 72, 2222
HinfI GANTC 7 cut(s) 194, 379, 992, 1085, 1115, 1306, 2261
HpaI GTTAAC 1 cut(s) 1692
HpaII CCGG 8 cut(s) 15, 84, 499, 1048, 1362, 1483, 2038, 2056
HphI GGTGA 7 cut(s) 298, 987, 1133, 1376, 1544, 2155, 2221
Hpy166II GTNNAC 9 cut(s) 37, 130, 136, 217, 562, 649, 1062, 1692, 1784
Hpy188I TCNGA 6 cut(s) 93, 324, 335, 490, 1172, 1555
Hpy8I GTNNAC 9 cut(s) 37, 130, 136, 217, 562, 649, 1062, 1692, 1784
Hpy99I CGWCG 6 cut(s) 146, 194, 218, 242, 634, 1665
HpyAV CCTTC 5 cut(s) 74, 1456, 1579, 1757, 2174
HpyCH4III ACNGT 4 cut(s) 7, 653, 739, 1571
HpyCH4IV ACGT 4 cut(s) 132, 240, 973, 1660
HpyF3I CTNAG 4 cut(s) 299, 624, 1169, 2199
HpySE526I ACGT 4 cut(s) 132, 240, 973, 1660
Hsp92I GRCGYC 2 cut(s) 132, 240
HspAI GCGC 2 cut(s) 657, 2020
Ksp22I TGATCA 1 cut(s) 1449
KspAI GTTAAC 1 cut(s) 1692
Kzo9I GATC 7 cut(s) 88, 118, 387, 495, 1137, 1449, 1791
LmnI GCTCC 9 cut(s) 308, 404, 472, 749, 879, 953, 1934, 2003, 2103
LweI GCATC 7 cut(s) 416, 448, 577, 597, 1666, 2050, 2104
MabI ACCWGGT 1 cut(s) 824
MaeI CTAG 6 cut(s) 257, 383, 1607, 1758, 1850, 1928
MaeII ACGT 4 cut(s) 132, 240, 973, 1660
MalI GATC 7 cut(s) 90, 120, 389, 497, 1139, 1451, 1793
MboI GATC 7 cut(s) 88, 118, 387, 495, 1137, 1449, 1791
MfeI CAATTG 2 cut(s) 1065, 1236
MflI RGATCY 1 cut(s) 387
MhlI GDGCHC 3 cut(s) 969, 1939, 2076
MlsI TGGCCA 1 cut(s) 1181
MluCI AATT 8 cut(s) 782, 1065, 1236, 1403, 1542, 1556, 1685, 1807
MluNI TGGCCA 1 cut(s) 1181
MlyI GAGTC 1 cut(s) 1079
MmeI TCCRAC 3 cut(s) 84, 286, 904
Mox20I TGGCCA 1 cut(s) 1181
MroXI GAANNNNTTC 1 cut(s) 329
MscI TGGCCA 1 cut(s) 1181
MseI TTAA 6 cut(s) 1002, 1026, 1079, 1209, 1559, 1691
MslI CAYNNNNRTG 5 cut(s) 456, 569, 642, 757, 2012
Msp20I TGGCCA 1 cut(s) 1181
MspA1I CMGCKG 2 cut(s) 668, 2198
MspI CCGG 8 cut(s) 15, 84, 499, 1048, 1362, 1483, 2038, 2056
MspR9I CCNGG 4 cut(s) 463, 826, 1048, 2057
MunI CAATTG 2 cut(s) 1065, 1236
Mva1269I GAATGC 2 cut(s) 1478, 1828
MvaI CCWGG 2 cut(s) 463, 826
MvnI CGCG 3 cut(s) 213, 344, 1886
NciI CCSGG 2 cut(s) 1048, 2057
NcoI CCATGG 1 cut(s) 1182
NdeII GATC 7 cut(s) 88, 118, 387, 495, 1137, 1449, 1791
NlaIV GGNNCC 9 cut(s) 503, 955, 982, 1259, 1774, 1936, 2005, 2073, 2074
NmeAIII GCCGAG 2 cut(s) 73, 1418
NmuCI GTSAC 8 cut(s) 241, 526, 733, 1243, 1364, 1571, 2143, 2227
NruI TCGCGA 1 cut(s) 344
NspI RCATGY 2 cut(s) 521, 874
PaeI GCATGC 1 cut(s) 521
PagI TCATGA 3 cut(s) 570, 1446, 2264
PaqCI CACCTGC 1 cut(s) 13
PceI AGGCCT 1 cut(s) 1376
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PctI GAATGC 2 cut(s) 1478, 1828
PdmI GAANNNNTTC 1 cut(s) 329
PfeI GAWTC 5 cut(s) 194, 379, 992, 1115, 1306
PflMI CCANNNNNTGG 1 cut(s) 825
PleI GAGTC 1 cut(s) 1079
PpsI GAGTC 1 cut(s) 1079
Psp6I CCWGG 2 cut(s) 461, 824
PspFI CCCAGC 4 cut(s) 745, 2022, 2075, 2080
PspGI CCWGG 2 cut(s) 461, 824
PspN4I GGNNCC 9 cut(s) 503, 955, 982, 1259, 1774, 1936, 2005, 2073, 2074
PspOMI GGGCCC 1 cut(s) 2072
PspPI GGNCC 7 cut(s) 367, 501, 1257, 1314, 1772, 2072, 2073
PsrI GAACNNNNNNTAC 2 cut(s) 942, 974
PstI CTGCAG 2 cut(s) 542, 673
PstNI CAGNNNCTG 2 cut(s) 1118, 1505
PsuI RGATCY 1 cut(s) 387
PvuII CAGCTG 1 cut(s) 668
RruI TCGCGA 1 cut(s) 344
RsaI GTAC 1 cut(s) 1873
RsaNI GTAC 1 cut(s) 1872
RseI CAYNNNNRTG 5 cut(s) 456, 569, 642, 757, 2012
SalI GTCGAC 1 cut(s) 215
SaqAI TTAA 6 cut(s) 1002, 1026, 1079, 1209, 1559, 1691
Sau3AI GATC 7 cut(s) 88, 118, 387, 495, 1137, 1449, 1791
Sau96I GGNCC 7 cut(s) 367, 501, 1257, 1314, 1772, 2072, 2073
SchI GAGTC 1 cut(s) 1079
ScrFI CCNGG 4 cut(s) 463, 826, 1048, 2057
SduI GDGCHC 3 cut(s) 969, 1939, 2076
SexAI ACCWGGT 1 cut(s) 824
SfaNI GCATC 7 cut(s) 416, 448, 577, 597, 1666, 2050, 2104
SfcI CTRYAG 5 cut(s) 538, 652, 669, 710, 1386
SinI GGWCC 3 cut(s) 1257, 1314, 1772
SmiMI CAYNNNNRTG 5 cut(s) 456, 569, 642, 757, 2012
SmlI CTYRAG 2 cut(s) 374, 1356
SmoI CTYRAG 2 cut(s) 374, 1356
SphI GCATGC 1 cut(s) 521
Sse9I AATT 8 cut(s) 782, 1065, 1236, 1403, 1542, 1556, 1685, 1807
SseBI AGGCCT 1 cut(s) 1376
SsiI CCGC 7 cut(s) 211, 787, 1679, 1754, 1886, 2117, 2196
SspMI CTAG 6 cut(s) 257, 383, 1607, 1758, 1850, 1928
StuI AGGCCT 1 cut(s) 1376
StyD4I CCNGG 4 cut(s) 461, 824, 1046, 2055
StyI CCWWGG 4 cut(s) 1182, 1261, 1310, 1956
TaaI ACNGT 4 cut(s) 7, 653, 739, 1571
TaiI ACGT 4 cut(s) 135, 243, 976, 1663
TaqI TCGA 6 cut(s) 69, 216, 692, 1083, 1596, 2033
TaqII GACCGA 1 cut(s) 188
TasI AATT 8 cut(s) 782, 1065, 1236, 1403, 1542, 1556, 1685, 1807
TauI GCSGC 1 cut(s) 1757
TfiI GAWTC 5 cut(s) 194, 379, 992, 1115, 1306
Tru1I TTAA 6 cut(s) 1002, 1026, 1079, 1209, 1559, 1691
Tru9I TTAA 6 cut(s) 1002, 1026, 1079, 1209, 1559, 1691
TscAI CASTG 7 cut(s) 39, 363, 656, 744, 840, 1079, 1459
TseFI GTSAC 8 cut(s) 241, 526, 733, 1243, 1364, 1571, 2143, 2227
Tsp45I GTSAC 8 cut(s) 241, 526, 733, 1243, 1364, 1571, 2143, 2227
TspDTI ATGAA 7 cut(s) 254, 559, 587, 950, 1173, 1440, 2136
TspGWI ACGGA 2 cut(s) 111, 1216
TspRI CASTG 7 cut(s) 39, 363, 656, 744, 840, 1079, 1459
Van91I CCANNNNNTGG 1 cut(s) 825
VpaK11BI GGWCC 3 cut(s) 1257, 1314, 1772
XapI RAATTY 2 cut(s) 1403, 1807
XbaI TCTAGA 1 cut(s) 382
XceI RCATGY 2 cut(s) 521, 874
XmiI GTMKAC 1 cut(s) 216
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 6 cut(s) 257, 383, 1607, 1758, 1850, 1928
ZraI GACGTC 2 cut(s) 133, 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.