MD13G1115300.v1.1

Ankyrin repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0002610
Physical Location & Seq
Reverse (-)
8353212 .. 8356015
2804 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1115300.v1.1.491

Sequence Viewer

Length: 2295 bp
ATGACGGTGTTCGGGAGCTCCGCCACGGCTTACCTGTCCGGCGGGAAAGCGCACGCGCACGTGTTTCCGATCGACTACGAGGCCGAGGTTTCGCAGCGGTTGGTGGACGCCGCGCACGACAACGACTCGAAATCGGCGGGGGAATGTCTAGGCGATCCTTTCGTGGACGTGAACTTTGTCGGAACGGTGTGCTTGAAGTCGAAGAAGACGGAGATTGTGGCGCAGGGCGAGTCGGCGCACGAGGTTCGCGTCGAGTACGAGGAGTTCAAGACTCAGATCACTGCCTTGTTCCTCGCCGCTCACTCTGGGAATTTGGCGCTCGTTAGGAAGCTCCTGAGTTATGGAGCAAATGTGAATCAAAACCTGTTCCGAGGCTATGCAACAACAGCAGCAGTGAGGGAGGGACATTTGGAGATATTGGAGGTGCTCATCAATGGCGGCGCGTCTCAGGAGGCATGTGAGGAGGCCTTGTTGGAGGCAAGCTACTTGGGGAGGGCTAGGTCCGCCGAGATGCTCATGGGATCCGACATGATCCGCCCTCAGGCGGCGGTGCATGCTCTTGTTTCTGCTTCCTGCAGAGGCTTTGTTGATGTAGTTGACACACTCATCAAGTGTGGGGTGGATGCGGATGCAACTGACAGGGCGCTGCTTCAATCGTCCAAGCCATTTCTATACACTAATGTTTACTGTAATGCGCTTGTTGCCGCCATTGTTAGCCGGCAAATTTCTGTAGTCAGACTCCTCTTGCAGGCTGGAGCCAGAACAGATATAAAAGTGAGTCTTGGGGGCTGGTCCTGGGATGTAAATACAGGAGAAGAGTTTCGGGTGGGTGCAGGACTAGCCGAGGCTTACAGTGTGACCTGGTGTGCTGTGGAGTATTTTGAAGCCAGTGGTGCTATCTTGCGGATGCTCTTGCAACACCACTCTCCTAACATTCCTCACTTTGGGAGGACTCTCATTCACCACGCCGTATTATGTAACAATGAAAGAGCGGTAGAGGTTCTGTTAAGTTGCGGTGCTGATGTAGAAGTTCCAATTAAGACAACAAATTCAGAAACTGACTGCCCTGTTCACATGGCGTCGCGACTTGGATTAAATAAGGTTCTTCAACAATTGGTTAGTGCGGGGTGCAATGTCAACTCTCGGACAGAATCTGGAGAAACTGCACTAATGAGCTGTGCTAGATATAAACACCAGGAATGCCTTAAAATTCTGGCTTCAGAGGGTGCTGATTTTGGCCTGGTGAATTCTGCTGGTCAGAGCGCAAGCGTAATAGCAGAGTCAGCAAGGTGGACTCTTGGCTTCCGACAAGCAGTTGCAGACGTGATTCGATCTGGTGAAATTGTTCAATCAAGCAATACATCAGTATTTTCTCCTCTAATGCTTGTGACTCAAGCAAACGATGTTGAGGCCTTGAAGAAACTGATTGAGGGAGCAGACGTTGATCTCAATGAGCAAGATGAAAAGGGATACTCAGCTGCCATGATAGCTGCAGAGGGTGGTTACCTGGAAACTTTCAAATTGCTTATCGATGCTGGGGCTGACATAAACCTGCACAATAAATGTGGTCAGACTGTAATGGAACTATTCGTTACAAACCAAAACAGTGAAGAATTTGAAAAGTTGTTTCTTAAGAATGCTGCACCTCAAAAGGTACTTGATAGTCCTATTGAGTTTTATGGGACTCTACATCAGGCAGTACAGCACGGCAACACAGATTTCGTTCTTACATTGATAAGCAGGGGTTCTGATGTGAATGCTTCTGATGCCGATGGATACACTCCATTGATGTTAGCAGCAAGAGGAGGCCACTCTACACTGTGCGAGCTTTTGATTACTTTAGGGGCAAAATGCGACATTGCGAATGCAAGACACGAGACAGCCCTCTTACTTGCAAGGAAAAGTGGGATTAAAAACGATGCAGAGAATGTGATATTGGATGAGGTTGCAAGAAGCCTTGTTCTTGGTGGGAGTCGCGTGAAGAAGCACACAAAATGCGGTAGAGGATCTCCACATCGAAAAATGCTGAAAATGGTTGGGGCTGCCGGGATTTTGCAGTGGGGGAAGTCGAGCAAGAGAAATGTGATTTGCAGGAGGGCGGAAGTCGGGGCTAGTGACTCGTTCAGATGGAACCGCCGGAGGAAATTCGACACTGACGAGCTGGGGCTGTTCCATGTGGTGACCACAAAGCACAAGGAGCTGCATTTTGTATGTGAAGGTGGGATTGAAATGGCTGAGCTCTGGGTGAGAGGGATCAAGCTTGTGACAATGAAAGCTGTTTTTGGCAAGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_3 Ank_4

Protein Analysis

765

Amino Acids

82.68

Weight (kDa)

6.14

Isoelectric Point (pI)

33.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 91 - 148 1.1e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 96 - 174 9.2e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 349 - 413 1.1e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 460 - 545 6.6e-10 Ankyrin repeats (3 copies)
Ank_5 PF13857 478 - 529 8.5e-09 Ankyrin repeats (many copies)
Ank_2 PF12796 563 - 639 2.5e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 563 - 612 3.1e-09 Ankyrin repeats (many copies)
Ank_5 PF13857 578 - 629 4.3e-06 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1560
AccBSI CCGCTC 2 cut(s) 299, 992
AccII CGCG 6 cut(s) 56, 113, 249, 443, 1084, 1977
AclWI GGATC 6 cut(s) 149, 516, 526, 529, 2014, 2261
AcsI RAATTY 7 cut(s) 310, 723, 1048, 1209, 1246, 1613, 2144
AcuI CTGAAG 1 cut(s) 1203
AcvI CACGTG 1 cut(s) 61
AcyI GRCGYC 2 cut(s) 108, 1079
AfaI GTAC 3 cut(s) 257, 1656, 1701
AfiI CCNNNNNNNGG 4 cut(s) 541, 544, 748, 944
AflII CTTAAG 1 cut(s) 1631
AflIII ACRYGT 1 cut(s) 60
AjiI CACGTC 2 cut(s) 169, 1324
AjnI CCWGG 5 cut(s) 794, 860, 1194, 1239, 1506
AjuI GAANNNNNNNTTGG 2 cut(s) 1919, 1951
Alw21I GWGCWC 3 cut(s) 20, 429, 2241
Alw26I GTCTC 2 cut(s) 450, 1871
AlwI GGATC 6 cut(s) 149, 516, 526, 529, 2014, 2261
AlwNI CAGNNNCTG 2 cut(s) 1058, 1154
AoxI GGCC 5 cut(s) 81, 465, 1237, 1410, 1807
ApeKI GCWGC 9 cut(s) 94, 389, 646, 1478, 1490, 1640, 1796, 2042, 2200
ApoI RAATTY 7 cut(s) 310, 723, 1048, 1209, 1246, 1613, 2144
ArsI GACNNNNNNTTYG 2 cut(s) 158, 190
Asp700I GAANNNNTTC 2 cut(s) 819, 1344
AspS9I GGNCC 2 cut(s) 501, 792
AsuC2I CCSGG 1 cut(s) 2047
AsuHPI GGTGA 5 cut(s) 953, 1255, 1349, 2191, 2257
AvaII GGWCC 2 cut(s) 501, 792
AxyI CCTNAGG 1 cut(s) 540
BamHI GGATCC 1 cut(s) 521
BanII GRGCYC 2 cut(s) 20, 2241
BauI CACGAG 2 cut(s) 239, 1874
BbrPI CACGTG 1 cut(s) 61
BbsI GAAGAC 1 cut(s) 212
Bbv12I GWGCWC 3 cut(s) 20, 429, 2241
BbvI GCAGC 9 cut(s) 106, 401, 633, 1465, 1477, 1627, 1808, 2029, 2187
BccI CCATC 2 cut(s) 1766, 2121
BceAI ACGGC 3 cut(s) 42, 953, 1723
BcgI CGANNNNNNTGC 2 cut(s) 227, 261
BciT130I CCWGG 5 cut(s) 796, 862, 1196, 1241, 1508
BciVI GTATCC 2 cut(s) 1463, 1769
BcnI CCSGG 1 cut(s) 2047
BcoDI GTCTC 2 cut(s) 450, 1871
BfaI CTAG 5 cut(s) 149, 498, 839, 1182, 2112
BfmI CTRYAG 3 cut(s) 574, 729, 1491
BfoI RGCGCY 2 cut(s) 320, 647
BfrI CTTAAG 1 cut(s) 1631
BfuAI ACCTGC 1 cut(s) 1560
BfuI GTATCC 2 cut(s) 1463, 1769
BlpI GCTNAGC 1 cut(s) 2235
Bme1390I CCNGG 6 cut(s) 796, 862, 1196, 1241, 1508, 2047
Bme18I GGWCC 2 cut(s) 501, 792
BmgBI CACGTC 2 cut(s) 169, 1324
BmgT120I GGNCC 2 cut(s) 501, 792
BmiI GGNNCC 3 cut(s) 523, 757, 2132
BmrFI CCNGG 6 cut(s) 796, 862, 1196, 1241, 1508, 2047
BmsI GCATC 7 cut(s) 501, 613, 619, 897, 1522, 1756, 1909
BpiI GAAGAC 1 cut(s) 212
BpmI CTGGAG 2 cut(s) 774, 1176
Bpu1102I GCTNAGC 1 cut(s) 2235
BpuEI CTTGAG 1 cut(s) 1377
BpuMI CCSGG 1 cut(s) 2047
Bsa29I ATCGAT 1 cut(s) 1530
BsaAI YACGTR 1 cut(s) 61
BsaHI GRCGYC 2 cut(s) 108, 1079
BsaJI CCNNGG 5 cut(s) 24, 84, 370, 795, 843
BsaXI ACNNNNNCTCC 6 cut(s) 336, 366, 455, 485, 1425, 1455
Bsc4I CCNNNNNNNGG 4 cut(s) 541, 544, 748, 944
Bse118I RCCGGY 1 cut(s) 717
Bse1I ACTGG 1 cut(s) 888
Bse21I CCTNAGG 1 cut(s) 540
Bse3DI GCAATG 2 cut(s) 1138, 1857
BseBI CCWGG 5 cut(s) 796, 862, 1196, 1241, 1508
BseCI ATCGAT 1 cut(s) 1530
BseDI CCNNGG 5 cut(s) 24, 84, 370, 795, 843
BseGI GGATG 5 cut(s) 628, 634, 805, 912, 1945
BseLI CCNNNNNNNGG 4 cut(s) 541, 544, 748, 944
BseMI GCAATG 2 cut(s) 1138, 1857
BseMII CTCAG 6 cut(s) 287, 326, 461, 554, 1488, 2226
BseNI ACTGG 1 cut(s) 888
BseRI GAGGAG 5 cut(s) 275, 476, 731, 1365, 1818
BseXI GCAGC 9 cut(s) 106, 401, 633, 1465, 1477, 1627, 1808, 2029, 2187
BseYI CCCAGC 2 cut(s) 1535, 2161
BsgI GTGCAG 4 cut(s) 852, 1149, 1538, 1626
Bsh1236I CGCG 6 cut(s) 56, 113, 249, 443, 1084, 1977
Bsh1285I CGRYCG 1 cut(s) 72
BshFI GGCC 5 cut(s) 83, 467, 1239, 1412, 1809
BshVI ATCGAT 1 cut(s) 1530
BsiEI CGRYCG 1 cut(s) 72
BsiHKAI GWGCWC 3 cut(s) 20, 429, 2241
BsiSI CCGG 4 cut(s) 39, 718, 2046, 2137
BslFI GGGAC 2 cut(s) 417, 1696
BslI CCNNNNNNNGG 4 cut(s) 541, 544, 748, 944
BsmAI GTCTC 2 cut(s) 450, 1871
BsmBI CGTCTC 1 cut(s) 450
BsmFI GGGAC 2 cut(s) 417, 1696
BsmI GAATGC 4 cut(s) 1205, 1642, 1762, 1870
BsnI GGCC 5 cut(s) 83, 467, 1239, 1412, 1809
Bsp1286I GDGCHC 3 cut(s) 20, 429, 2241
Bsp143I GATC 9 cut(s) 69, 154, 276, 521, 531, 1331, 1444, 2006, 2253
Bsp1720I GCTNAGC 1 cut(s) 2235
Bsp68I TCGCGA 1 cut(s) 1084
BspANI GGCC 5 cut(s) 83, 467, 1239, 1412, 1809
BspCNI CTCAG 6 cut(s) 286, 327, 460, 553, 1487, 2227
BspDI ATCGAT 1 cut(s) 1530
BspFNI CGCG 6 cut(s) 56, 113, 249, 443, 1084, 1977
BspLI GGNNCC 3 cut(s) 523, 757, 2132
BspMAI CTGCAG 2 cut(s) 578, 1495
BspMI ACCTGC 1 cut(s) 1560
BspPI GGATC 6 cut(s) 149, 516, 526, 529, 2014, 2261
BspTI CTTAAG 1 cut(s) 1631
BsrBI CCGCTC 2 cut(s) 299, 992
BsrDI GCAATG 2 cut(s) 1138, 1857
BsrFI RCCGGY 1 cut(s) 717
BsrI ACTGG 1 cut(s) 888
BssAI RCCGGY 1 cut(s) 717
BssECI CCNNGG 5 cut(s) 24, 84, 370, 795, 843
BssMI GATC 9 cut(s) 69, 154, 276, 521, 531, 1331, 1444, 2006, 2253
BssNI GRCGYC 2 cut(s) 108, 1079
BssSI CACGAG 2 cut(s) 239, 1874
Bst2BI CACGAG 2 cut(s) 239, 1874
Bst2UI CCWGG 5 cut(s) 796, 862, 1196, 1241, 1508
Bst4CI ACNGT 7 cut(s) 7, 187, 689, 854, 1576, 1607, 1821
Bst6I CTCTTC 1 cut(s) 810
BstACI GRCGYC 2 cut(s) 108, 1079
BstAFI CTTAAG 1 cut(s) 1631
BstBAI YACGTR 1 cut(s) 61
BstC8I GCNNGC 8 cut(s) 54, 481, 555, 719, 750, 1267, 1826, 2288
BstDEI CTNAG 6 cut(s) 273, 335, 447, 540, 1474, 2235
BstDSI CCRYGG 1 cut(s) 24
BstEII GGTNACC 2 cut(s) 1502, 2179
BstENI CCTNNNNNAGG 1 cut(s) 746
BstF5I GGATG 5 cut(s) 628, 634, 805, 912, 1945
BstFNI CGCG 6 cut(s) 56, 113, 249, 443, 1084, 1977
BstH2I RGCGCY 2 cut(s) 320, 647
BstKTI GATC 9 cut(s) 72, 157, 279, 524, 534, 1334, 1447, 2009, 2256
BstMAI GTCTC 2 cut(s) 450, 1871
BstMBI GATC 9 cut(s) 69, 154, 276, 521, 531, 1331, 1444, 2006, 2253
BstMCI CGRYCG 1 cut(s) 72
BstNI CCWGG 5 cut(s) 796, 862, 1196, 1241, 1508
BstNSI RCATGY 2 cut(s) 459, 557
BstPI GGTNACC 2 cut(s) 1502, 2179
BstSCI CCNGG 6 cut(s) 794, 860, 1194, 1239, 1506, 2045
BstSFI CTRYAG 3 cut(s) 574, 729, 1491
BstUI CGCG 6 cut(s) 56, 113, 249, 443, 1084, 1977
BstV1I GCAGC 9 cut(s) 106, 401, 633, 1465, 1477, 1627, 1808, 2029, 2187
BstV2I GAAGAC 1 cut(s) 212
BstX2I RGATCY 2 cut(s) 521, 2006
BstYI RGATCY 2 cut(s) 521, 2006
Bsu15I ATCGAT 1 cut(s) 1530
Bsu36I CCTNAGG 1 cut(s) 540
BsuI GTATCC 2 cut(s) 1463, 1769
BsuRI GGCC 5 cut(s) 83, 467, 1239, 1412, 1809
BsuTUI ATCGAT 1 cut(s) 1530
BtgI CCRYGG 1 cut(s) 24
BtrI CACGTC 2 cut(s) 169, 1324
BtsCI GGATG 5 cut(s) 628, 634, 805, 912, 1945
BtsI GCAGTG 3 cut(s) 279, 399, 2063
BtsIMutI CAGTG 8 cut(s) 279, 399, 859, 895, 1612, 1817, 2063, 2151
BtuMI TCGCGA 1 cut(s) 1084
BveI ACCTGC 1 cut(s) 1560
Cac8I GCNNGC 8 cut(s) 54, 481, 555, 719, 750, 1267, 1826, 2288
CaiI CAGNNNCTG 2 cut(s) 1058, 1154
Cfr10I RCCGGY 1 cut(s) 717
Cfr13I GGNCC 2 cut(s) 501, 792
ClaI ATCGAT 1 cut(s) 1530
CseI GACGC 4 cut(s) 116, 238, 432, 1068
CsiI ACCWGGT 1 cut(s) 860
Csp6I GTAC 3 cut(s) 256, 1655, 1700
CspCI CAANNNNNGTGG 2 cut(s) 1546, 1581
CviAII CATG 7 cut(s) 456, 517, 529, 554, 1075, 1483, 2174
CviQI GTAC 3 cut(s) 256, 1655, 1700
DdeI CTNAG 6 cut(s) 273, 335, 447, 540, 1474, 2235
DpnI GATC 9 cut(s) 71, 156, 278, 523, 533, 1333, 1446, 2008, 2255
DpnII GATC 9 cut(s) 69, 154, 276, 521, 531, 1331, 1444, 2006, 2253
Eam1104I CTCTTC 1 cut(s) 810
EarI CTCTTC 1 cut(s) 810
EciI GGCGGA 4 cut(s) 10, 493, 524, 2114
Ecl136II GAGCTC 2 cut(s) 18, 2239
Eco147I AGGCCT 2 cut(s) 467, 1412
Eco24I GRGCYC 2 cut(s) 20, 2241
Eco47I GGWCC 2 cut(s) 501, 792
Eco53kI GAGCTC 2 cut(s) 18, 2239
Eco57I CTGAAG 1 cut(s) 1203
Eco72I CACGTG 1 cut(s) 61
Eco81I CCTNAGG 1 cut(s) 540
Eco91I GGTNACC 2 cut(s) 1502, 2179
EcoICRI GAGCTC 2 cut(s) 18, 2239
EcoNI CCTNNNNNAGG 1 cut(s) 746
EcoO65I GGTNACC 2 cut(s) 1502, 2179
EcoRI GAATTC 1 cut(s) 1246
EcoRII CCWGG 5 cut(s) 794, 860, 1194, 1239, 1506
EcoT38I GRGCYC 2 cut(s) 20, 2241
Esp3I CGTCTC 1 cut(s) 450
FaeI CATG 7 cut(s) 459, 520, 532, 557, 1078, 1486, 2177
FalI AAGNNNNNCTT 2 cut(s) 765, 797
FaqI GGGAC 2 cut(s) 417, 1696
FatI CATG 7 cut(s) 455, 516, 528, 553, 1074, 1482, 2173
FauI CCCGC 3 cut(s) 35, 130, 1117
FokI GGATG 5 cut(s) 635, 641, 812, 919, 1952
FriOI GRGCYC 2 cut(s) 20, 2241
FspBI CTAG 5 cut(s) 149, 498, 839, 1182, 2112
GsaI CCCAGC 2 cut(s) 1539, 2165
GsuI CTGGAG 2 cut(s) 774, 1176
HaeII RGCGCY 2 cut(s) 320, 647
HaeIII GGCC 5 cut(s) 83, 467, 1239, 1412, 1809
HapII CCGG 4 cut(s) 39, 718, 2046, 2137
HgaI GACGC 4 cut(s) 116, 238, 432, 1068
Hin1I GRCGYC 2 cut(s) 108, 1079
Hin1II CATG 7 cut(s) 459, 520, 532, 557, 1078, 1486, 2177
HincII GTYRAC 2 cut(s) 598, 1138
HindII GTYRAC 2 cut(s) 598, 1138
HindIII AAGCTT 2 cut(s) 2258, 2288
HpaII CCGG 4 cut(s) 39, 718, 2046, 2137
HphI GGTGA 5 cut(s) 953, 1255, 1349, 2191, 2257
Hpy166II GTNNAC 8 cut(s) 106, 166, 172, 598, 685, 1072, 1138, 1293
Hpy188III TCNNGA 6 cut(s) 13, 268, 334, 449, 1083, 1155
Hpy8I GTNNAC 8 cut(s) 106, 166, 172, 598, 685, 1072, 1138, 1293
Hpy99I CGWCG 2 cut(s) 254, 1084
HpyAV CCTTC 1 cut(s) 2210
HpyCH4III ACNGT 7 cut(s) 7, 187, 689, 854, 1576, 1607, 1821
HpyCH4IV ACGT 4 cut(s) 60, 168, 1323, 1440
HpyF3I CTNAG 6 cut(s) 273, 335, 447, 540, 1474, 2235
HpySE526I ACGT 4 cut(s) 60, 168, 1323, 1440
Hsp92I GRCGYC 2 cut(s) 108, 1079
Hsp92II CATG 7 cut(s) 459, 520, 532, 557, 1078, 1486, 2177
KroI GCCGGC 1 cut(s) 717
KroNI GCCGGC 1 cut(s) 719
Kzo9I GATC 9 cut(s) 69, 154, 276, 521, 531, 1331, 1444, 2006, 2253
LmnI GCTCC 7 cut(s) 15, 23, 336, 344, 755, 1433, 2197
Lsp1109I GCAGC 9 cut(s) 106, 401, 633, 1465, 1477, 1627, 1808, 2029, 2187
LweI GCATC 7 cut(s) 501, 613, 619, 897, 1522, 1756, 1909
MabI ACCWGGT 1 cut(s) 860
MaeI CTAG 5 cut(s) 149, 498, 839, 1182, 2112
MaeII ACGT 4 cut(s) 60, 168, 1323, 1440
MaeIII GTNAC 8 cut(s) 856, 977, 1387, 1502, 1591, 2114, 2179, 2263
MalI GATC 9 cut(s) 71, 156, 278, 523, 533, 1333, 1446, 2008, 2255
MbiI CCGCTC 2 cut(s) 299, 992
MboI GATC 9 cut(s) 69, 154, 276, 521, 531, 1331, 1444, 2006, 2253
MboII GAAGA 7 cut(s) 214, 217, 827, 1097, 1429, 1622, 1993
MfeI CAATTG 1 cut(s) 1112
MflI RGATCY 2 cut(s) 521, 2006
MhlI GDGCHC 3 cut(s) 20, 429, 2241
MmeI TCCRAC 4 cut(s) 160, 453, 549, 1330
MroNI GCCGGC 1 cut(s) 717
MroXI GAANNNNTTC 2 cut(s) 819, 1344
MseI TTAA 6 cut(s) 1007, 1038, 1094, 1206, 1632, 1911
MspA1I CMGCKG 2 cut(s) 97, 1478
MspCI CTTAAG 1 cut(s) 1631
MspI CCGG 4 cut(s) 39, 718, 2046, 2137
MspR9I CCNGG 6 cut(s) 796, 862, 1196, 1241, 1508, 2047
MunI CAATTG 1 cut(s) 1112
Mva1269I GAATGC 4 cut(s) 1205, 1642, 1762, 1870
MvaI CCWGG 5 cut(s) 796, 862, 1196, 1241, 1508
MvnI CGCG 6 cut(s) 56, 113, 249, 443, 1084, 1977
NaeI GCCGGC 1 cut(s) 719
NciI CCSGG 1 cut(s) 2047
NdeII GATC 9 cut(s) 69, 154, 276, 521, 531, 1331, 1444, 2006, 2253
NgoMIV GCCGGC 1 cut(s) 717
NlaIII CATG 7 cut(s) 459, 520, 532, 557, 1078, 1486, 2177
NlaIV GGNNCC 3 cut(s) 523, 757, 2132
NmeAIII GCCGAG 3 cut(s) 109, 532, 868
NmuCI GTSAC 5 cut(s) 856, 1387, 2114, 2179, 2263
NruI TCGCGA 1 cut(s) 1084
NspI RCATGY 2 cut(s) 459, 557
PaeI GCATGC 1 cut(s) 557
PceI AGGCCT 2 cut(s) 467, 1412
PcsI WCGNNNNNNNCGW 3 cut(s) 114, 246, 2154
PctI GAATGC 4 cut(s) 1205, 1642, 1762, 1870
PdiI GCCGGC 1 cut(s) 719
PdmI GAANNNNTTC 2 cut(s) 819, 1344
PfeI GAWTC 3 cut(s) 355, 1151, 1327
Ple19I CGATCG 1 cut(s) 72
PmaCI CACGTG 1 cut(s) 61
PmlI CACGTG 1 cut(s) 61
Ppu21I YACGTR 1 cut(s) 61
Psp124BI GAGCTC 2 cut(s) 20, 2241
Psp6I CCWGG 5 cut(s) 794, 860, 1194, 1239, 1506
PspCI CACGTG 1 cut(s) 61
PspEI GGTNACC 2 cut(s) 1502, 2179
PspFI CCCAGC 2 cut(s) 1535, 2161
PspGI CCWGG 5 cut(s) 794, 860, 1194, 1239, 1506
PspN4I GGNNCC 3 cut(s) 523, 757, 2132
PspPI GGNCC 2 cut(s) 501, 792
PsrI GAACNNNNNNTAC 2 cut(s) 248, 280
PstI CTGCAG 2 cut(s) 578, 1495
PstNI CAGNNNCTG 2 cut(s) 1058, 1154
PsuI RGATCY 2 cut(s) 521, 2006
PvuI CGATCG 1 cut(s) 72
PvuII CAGCTG 1 cut(s) 1478
RruI TCGCGA 1 cut(s) 1084
RsaI GTAC 3 cut(s) 257, 1656, 1701
RsaNI GTAC 3 cut(s) 256, 1655, 1700
SacI GAGCTC 2 cut(s) 20, 2241
SaqAI TTAA 6 cut(s) 1007, 1038, 1094, 1206, 1632, 1911
Sau3AI GATC 9 cut(s) 69, 154, 276, 521, 531, 1331, 1444, 2006, 2253
Sau96I GGNCC 2 cut(s) 501, 792
ScrFI CCNGG 6 cut(s) 796, 862, 1196, 1241, 1508, 2047
SduI GDGCHC 3 cut(s) 20, 429, 2241
SexAI ACCWGGT 1 cut(s) 860
SfaNI GCATC 7 cut(s) 501, 613, 619, 897, 1522, 1756, 1909
SfcI CTRYAG 3 cut(s) 574, 729, 1491
SinI GGWCC 2 cut(s) 501, 792
SmlI CTYRAG 2 cut(s) 1392, 1631
SmoI CTYRAG 2 cut(s) 1392, 1631
SphI GCATGC 1 cut(s) 557
SseBI AGGCCT 2 cut(s) 467, 1412
SspMI CTAG 5 cut(s) 149, 498, 839, 1182, 2112
SstI GAGCTC 2 cut(s) 20, 2241
StuI AGGCCT 2 cut(s) 467, 1412
StyD4I CCNGG 6 cut(s) 794, 860, 1194, 1239, 1506, 2045
TaaI ACNGT 7 cut(s) 7, 187, 689, 854, 1576, 1607, 1821
TaiI ACGT 4 cut(s) 63, 171, 1326, 1443
TaqI TCGA 9 cut(s) 72, 128, 200, 252, 1330, 1530, 2017, 2069, 2148
TatI WGTACW 1 cut(s) 1699
TauI GCSGC 5 cut(s) 113, 299, 441, 548, 707
TfiI GAWTC 3 cut(s) 355, 1151, 1327
Tru1I TTAA 6 cut(s) 1007, 1038, 1094, 1206, 1632, 1911
Tru9I TTAA 6 cut(s) 1007, 1038, 1094, 1206, 1632, 1911
TscAI CASTG 8 cut(s) 286, 399, 859, 895, 1612, 1824, 2063, 2158
TseFI GTSAC 5 cut(s) 856, 1387, 2114, 2179, 2263
TseI GCWGC 9 cut(s) 94, 389, 646, 1478, 1490, 1640, 1796, 2042, 2200
Tsp45I GTSAC 5 cut(s) 856, 1387, 2114, 2179, 2263
TspDTI ATGAA 3 cut(s) 999, 1476, 2285
TspGWI ACGGA 1 cut(s) 224
TspRI CASTG 8 cut(s) 286, 399, 859, 895, 1612, 1824, 2063, 2158
Vha464I CTTAAG 1 cut(s) 1631
VpaK11BI GGWCC 2 cut(s) 501, 792
XagI CCTNNNNNAGG 1 cut(s) 746
XapI RAATTY 7 cut(s) 310, 723, 1048, 1209, 1246, 1613, 2144
XceI RCATGY 2 cut(s) 459, 557
XmnI GAANNNNTTC 2 cut(s) 819, 1344
XspI CTAG 5 cut(s) 149, 498, 839, 1182, 2112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.