Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003339

Physical Location & Seq

Genomic Coordinates Forward (+)

4847247 .. 4849053

Gene Structure 1807 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G14970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1068 bp

ATGGCGGCCGCATCAGCACGAGCTTTCTTCATGCTCTCTCGTGTAACTGACCTTTCAAAGAAAAAGCTAATCCTTCACCAACCACCACCGTCGTCATCTCCTCACCGGCTACCTTATGCTCCGAATCGTGCGGTGTCTTCCTCCGCTGTAATCAGCTGTCTCAGCGGTGGTGGTGTTTCCTCCGACGATTCGTATGTATCTACTCGTCGGTCTAAGTTAGATCGAGGTTTCGCTGTGATCGCGAATTTGGTGAATCGGATCCAGCCGCTTGATACGTCTGTTATCTCTAAAGGCTTATCTGATTCAGCTAAGGATTCGATGAAACAGACGATTTCTTCTATGCTTGGTCTTCTTCCTTCCGATCAATTTTCCGTTTCCGTTACTATCTCCGAACAGCCTCTTTATCGTCTCCTTATTTCTTCCATCATCACCGGGTATACATTGTGGAATGCGGAGTATCGTGTATCACTGAGGAGGAATTTTGATATACCGATTGATCCTAGAAAGGAGGAGGAGGATCAATCTTCGAAAGACAATGTTAGATTTGGTTCAGAGAAGGGAATGAGTGAGGATTTAGGGAATTGTGTTGAGGAATTTGAGAGACTGAGTCCTCAGGTGTTTGGAGACTTGTCACCTGAAGCGTTGAGTTATATTCAGCTTTTGCAGTCTGAGCTATCTTCCATGAAAGAGGAGCTAGATTCACAAAAGAAGAAAGCTTTGAGGATAGAATGTGAGAAAGGAAACAGGAATGATTTGTTGGATTATTTGCGTTCTTTAGATCCCGAGATGGTGACTGAGTTATCTCAACTGTCTTCACCGGAAGTGGAAGAGATTGTGAACCAGCTTGTCCAAAACGTATTAGAGAGGCTCTTCGAAGACCAGACTACTTCAAATTTCATGCAAAATCCTGGCATAAGGACTACAGAAGGTGGTGATGGAACTGGTAGAAAGGTGGACACATCCAGGGATTACCTTGCAAAGCTCCTTTTCTGGTGCATGCTATTGGGACATCATTTAAGAGGTTTGGAGAATAGATTACATCTCAGCTGTGTTGTTGGGTTGCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF760

Protein Analysis

355

Amino Acids

39.57

Weight (kDa)

5.57

Isoelectric Point (pI)

56.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF760	PF05542	83 - 161	3.5e-22	Protein of unknown function (DUF760)
DUF760	PF05542	251 - 351	7.3e-23	Protein of unknown function (DUF760)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14970
fragaria_vesca	FvH4_6g49830 FvH4_6g49830 FvH4_6g49830 FvH4_6g49830
malus_domestica	MD09G1041100.v1.1 MD17G1042400.v1.1
prunus_persica	Prupe.3G276600_v2.0.a1 Prupe.3G276600_v2.0.a1
pyrus_communis	pycom17g03800
rosa_chinensis	RchiOBHm_Chr2g0169981 RchiOBHm_Chr4g0386121 RchiOBHm_Chr4g0386261 RchiOBHm_Chr4g0386271
rosa_laevigata	RLG00000021916
rosa_multiflora	Rmu_sc0002862.1_g000014 Rmu_sc0003415.1_g000008 Rmu_sc0013078.1_g000018 Rmu_ssc0000389.1_g000006
rosa_roxburghii	Rroxscaffold_2G00081690 Rroxscaffold_5G00333850
rosa_rugosa	Rorug02G0544900
rosa_samantha	Rh2AG616900 Rh2CG598000 Rh2DG639900 Rh3CG265700 Rh4AG010800 Rh4BG007900 Rh4DG118700 Rh5DG240500 Rh7DG285000 Rh7DG341500
rosa_wichuraiana	Rw2G029160 Rw2G034420 Rw2G051100 Rw3G016760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	437
AccII	CGCG	1 cut(s)	242
AciI	CCGC	7 cut(s)	5, 9, 131, 144, 165, 266, 452
AclWI	GGATC	5 cut(s)	253, 266, 491, 525, 773
AcoI	YGGCCR	1 cut(s)	6
AcsI	RAATTY	4 cut(s)	244, 478, 593, 892
AcuI	CTGAAG	1 cut(s)	657
AgsI	TTSAA	2 cut(s)	57, 891
AjnI	CCWGG	2 cut(s)	907, 962
AjuI	GAANNNNNNNTTGG	2 cut(s)	740, 772
Alw26I	GTCTC	4 cut(s)	164, 413, 595, 618
AlwI	GGATC	5 cut(s)	253, 266, 491, 525, 773
Ama87I	CYCGRG	1 cut(s)	782
AoxI	GGCC	1 cut(s)	6
ApoI	RAATTY	4 cut(s)	244, 478, 593, 892
AsuC2I	CCSGG	1 cut(s)	433
AsuHPI	GGTGA	8 cut(s)	68, 95, 262, 421, 624, 802, 807, 944
AsuII	TTCGAA	2 cut(s)	527, 873
AvaI	CYCGRG	1 cut(s)	782
AxyI	CCTNAGG	1 cut(s)	612
BaeI	ACNNNNGTAYC	2 cut(s)	264, 297
BamHI	GGATCC	1 cut(s)	258
BauI	CACGAG	2 cut(s)	18, 39
BbsI	GAAGAC	4 cut(s)	129, 341, 804, 882
BccI	CCATC	3 cut(s)	431, 781, 929
BciT130I	CCWGG	2 cut(s)	909, 964
BcnI	CCSGG	1 cut(s)	433
BcoDI	GTCTC	4 cut(s)	164, 413, 595, 618
BfaI	CTAG	2 cut(s)	501, 695
BfmI	CTRYAG	1 cut(s)	921
BisI	GCNGC	3 cut(s)	6, 9, 266
BlsI	GCNGC	3 cut(s)	7, 10, 267
Bme1390I	CCNGG	3 cut(s)	433, 909, 964
BmeT110I	CYCGRG	1 cut(s)	782
BmiI	GGNNCC	1 cut(s)	260
BmrFI	CCNGG	3 cut(s)	433, 909, 964
BmsI	GCATC	1 cut(s)	20
BpiI	GAAGAC	4 cut(s)	129, 341, 804, 882
Bpu10I	CCTNAGC	1 cut(s)	309
Bpu14I	TTCGAA	2 cut(s)	527, 873
BpuMI	CCSGG	1 cut(s)	433
BsaJI	CCNNGG	1 cut(s)	963
BsaWI	WCCGGW	1 cut(s)	817
Bse118I	RCCGGY	1 cut(s)	105
Bse1I	ACTGG	1 cut(s)	946
Bse21I	CCTNAGG	1 cut(s)	612
BseBI	CCWGG	2 cut(s)	909, 964
BseDI	CCNNGG	1 cut(s)	963
BseGI	GGATG	1 cut(s)	959
BseMII	CTCAG	7 cut(s)	175, 461, 596, 626, 660, 786, 1057
BseNI	ACTGG	1 cut(s)	946
BseRI	GAGGAG	5 cut(s)	90, 487, 524, 527, 704
BseX3I	CGGCCG	1 cut(s)	6
Bsh1236I	CGCG	1 cut(s)	242
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	1 cut(s)	8
BsiEI	CGRYCG	1 cut(s)	9
BsiHKCI	CYCGRG	1 cut(s)	782
BsiSI	CCGG	3 cut(s)	106, 432, 818
BslFI	GGGAC	1 cut(s)	1020
BsmAI	GTCTC	4 cut(s)	164, 413, 595, 618
BsmBI	CGTCTC	1 cut(s)	413
BsmFI	GGGAC	1 cut(s)	1020
BsmI	GAATGC	1 cut(s)	454
BsnI	GGCC	1 cut(s)	8
BsoBI	CYCGRG	1 cut(s)	782
Bsp119I	TTCGAA	2 cut(s)	527, 873
Bsp143I	GATC	7 cut(s)	220, 237, 258, 361, 496, 517, 778
Bsp68I	TCGCGA	1 cut(s)	242
BspACI	CCGC	7 cut(s)	5, 9, 131, 144, 165, 266, 452
BspANI	GGCC	1 cut(s)	8
BspCNI	CTCAG	7 cut(s)	174, 462, 597, 625, 661, 787, 1056
BspFNI	CGCG	1 cut(s)	242
BspLI	GGNNCC	1 cut(s)	260
BspPI	GGATC	5 cut(s)	253, 266, 491, 525, 773
BspQI	GCTCTTC	1 cut(s)	875
BspT104I	TTCGAA	2 cut(s)	527, 873
BsrFI	RCCGGY	1 cut(s)	105
BsrI	ACTGG	1 cut(s)	946
BssAI	RCCGGY	1 cut(s)	105
BssECI	CCNNGG	1 cut(s)	963
BssMI	GATC	7 cut(s)	220, 237, 258, 361, 496, 517, 778
BssNAI	GTATAC	1 cut(s)	438
BssSI	CACGAG	2 cut(s)	18, 39
Bst1107I	GTATAC	1 cut(s)	438
Bst2BI	CACGAG	2 cut(s)	18, 39
Bst2UI	CCWGG	2 cut(s)	909, 964
Bst4CI	ACNGT	2 cut(s)	90, 810
Bst6I	CTCTTC	2 cut(s)	822, 875
BstBI	TTCGAA	2 cut(s)	527, 873
BstC8I	GCNNGC	1 cut(s)	998
BstDEI	CTNAG	9 cut(s)	161, 213, 309, 470, 605, 612, 669, 795, 1043
BstF5I	GGATG	1 cut(s)	959
BstFNI	CGCG	1 cut(s)	242
BstKTI	GATC	7 cut(s)	223, 240, 261, 364, 499, 520, 781
BstMAI	GTCTC	4 cut(s)	164, 413, 595, 618
BstMBI	GATC	7 cut(s)	220, 237, 258, 361, 496, 517, 778
BstMCI	CGRYCG	1 cut(s)	9
BstMWI	GCNNNNNNNGC	4 cut(s)	14, 162, 239, 670
BstNI	CCWGG	2 cut(s)	909, 964
BstNSI	RCATGY	1 cut(s)	1000
BstSCI	CCNGG	3 cut(s)	431, 907, 962
BstSFI	CTRYAG	1 cut(s)	921
BstUI	CGCG	1 cut(s)	242
BstV2I	GAAGAC	4 cut(s)	129, 341, 804, 882
BstX2I	RGATCY	2 cut(s)	258, 778
BstYI	RGATCY	2 cut(s)	258, 778
BstZ17I	GTATAC	1 cut(s)	438
BstZI	CGGCCG	1 cut(s)	6
Bsu36I	CCTNAGG	1 cut(s)	612
BsuRI	GGCC	1 cut(s)	8
BtsCI	GGATG	1 cut(s)	959
BtsIMutI	CAGTG	1 cut(s)	467
BtuMI	TCGCGA	1 cut(s)	242
Cac8I	GCNNGC	1 cut(s)	998
CciNI	GCGGCCGC	1 cut(s)	6
Cfr10I	RCCGGY	1 cut(s)	105
CviAII	CATG	4 cut(s)	31, 682, 898, 997
DdeI	CTNAG	9 cut(s)	161, 213, 309, 470, 605, 612, 669, 795, 1043
DpnI	GATC	7 cut(s)	222, 239, 260, 363, 498, 519, 780
DpnII	GATC	7 cut(s)	220, 237, 258, 361, 496, 517, 778
EaeI	YGGCCR	1 cut(s)	6
EagI	CGGCCG	1 cut(s)	6
Eam1104I	CTCTTC	2 cut(s)	822, 875
EarI	CTCTTC	2 cut(s)	822, 875
EclXI	CGGCCG	1 cut(s)	6
Eco52I	CGGCCG	1 cut(s)	6
Eco57I	CTGAAG	1 cut(s)	657
Eco81I	CCTNAGG	1 cut(s)	612
Eco88I	CYCGRG	1 cut(s)	782
EcoRII	CCWGG	2 cut(s)	907, 962
Esp3I	CGTCTC	1 cut(s)	413
FaeI	CATG	4 cut(s)	34, 685, 901, 1000
FaqI	GGGAC	1 cut(s)	1020
FatI	CATG	4 cut(s)	30, 681, 897, 996
FblI	GTMKAC	1 cut(s)	437
Fnu4HI	GCNGC	3 cut(s)	6, 9, 266
FokI	GGATG	1 cut(s)	946
Fsp4HI	GCNGC	3 cut(s)	6, 9, 266
FspBI	CTAG	2 cut(s)	501, 695
GluI	GCNGC	3 cut(s)	6, 9, 266
HaeIII	GGCC	1 cut(s)	8
HapII	CCGG	3 cut(s)	106, 432, 818
Hin1II	CATG	4 cut(s)	34, 685, 901, 1000
HindIII	AAGCTT	1 cut(s)	714
HinfI	GANTC	7 cut(s)	124, 188, 253, 302, 314, 607, 698
HpaII	CCGG	3 cut(s)	106, 432, 818
HphI	GGTGA	8 cut(s)	68, 95, 262, 421, 624, 802, 807, 944
Hpy166II	GTNNAC	3 cut(s)	438, 838, 955
Hpy188I	TCNGA	8 cut(s)	123, 184, 258, 301, 361, 391, 553, 670
Hpy188III	TCNNGA	2 cut(s)	241, 782
Hpy8I	GTNNAC	3 cut(s)	438, 838, 955
Hpy99I	CGWCG	3 cut(s)	94, 188, 210
HpyAV	CCTTC	4 cut(s)	83, 366, 550, 920
HpyCH4III	ACNGT	2 cut(s)	90, 810
HpyCH4IV	ACGT	2 cut(s)	275, 855
HpyCH4V	TGCA	4 cut(s)	664, 901, 977, 996
HpyF10VI	GCNNNNNNNGC	4 cut(s)	14, 162, 239, 670
HpyF3I	CTNAG	9 cut(s)	161, 213, 309, 470, 605, 612, 669, 795, 1043
HpySE526I	ACGT	2 cut(s)	275, 855
Hsp92II	CATG	4 cut(s)	34, 685, 901, 1000
Kzo9I	GATC	7 cut(s)	220, 237, 258, 361, 496, 517, 778
LguI	GCTCTTC	1 cut(s)	875
LmnI	GCTCC	3 cut(s)	124, 691, 987
LweI	GCATC	1 cut(s)	20
MaeI	CTAG	2 cut(s)	501, 695
MaeII	ACGT	2 cut(s)	275, 855
MaeIII	GTNAC	4 cut(s)	43, 379, 630, 790
MalI	GATC	7 cut(s)	222, 239, 260, 363, 498, 519, 780
MboI	GATC	7 cut(s)	220, 237, 258, 361, 496, 517, 778
MflI	RGATCY	2 cut(s)	258, 778
MluCI	AATT	6 cut(s)	244, 365, 478, 580, 593, 892
MlyI	GAGTC	1 cut(s)	616
MmeI	TCCRAC	2 cut(s)	207, 738
MseI	TTAA	1 cut(s)	1016
MspA1I	CMGCKG	4 cut(s)	146, 156, 165, 1047
MspI	CCGG	3 cut(s)	106, 432, 818
MspR9I	CCNGG	3 cut(s)	433, 909, 964
Mva1269I	GAATGC	1 cut(s)	454
MvaI	CCWGG	2 cut(s)	909, 964
MvnI	CGCG	1 cut(s)	242
MwoI	GCNNNNNNNGC	4 cut(s)	14, 162, 239, 670
NciI	CCSGG	1 cut(s)	433
NdeII	GATC	7 cut(s)	220, 237, 258, 361, 496, 517, 778
NlaIII	CATG	4 cut(s)	34, 685, 901, 1000
NlaIV	GGNNCC	1 cut(s)	260
NmuCI	GTSAC	2 cut(s)	630, 790
NotI	GCGGCCGC	1 cut(s)	6
NruI	TCGCGA	1 cut(s)	242
NspI	RCATGY	1 cut(s)	1000
NspV	TTCGAA	2 cut(s)	527, 873
PaeI	GCATGC	1 cut(s)	1000
PciSI	GCTCTTC	1 cut(s)	875
PctI	GAATGC	1 cut(s)	454
PfeI	GAWTC	6 cut(s)	124, 188, 253, 302, 314, 698
PflFI	GACNNNGTC	1 cut(s)	606
PkrI	GCNGC	3 cut(s)	7, 10, 267
PleI	GAGTC	1 cut(s)	615
PpsI	GAGTC	1 cut(s)	615
Psp6I	CCWGG	2 cut(s)	907, 962
PspGI	CCWGG	2 cut(s)	907, 962
PspN4I	GGNNCC	1 cut(s)	260
PsuI	RGATCY	2 cut(s)	258, 778
PsyI	GACNNNGTC	1 cut(s)	606
PvuII	CAGCTG	2 cut(s)	156, 1047
RruI	TCGCGA	1 cut(s)	242
SapI	GCTCTTC	1 cut(s)	875
SaqAI	TTAA	1 cut(s)	1016
SatI	GCNGC	3 cut(s)	6, 9, 266
Sau3AI	GATC	7 cut(s)	220, 237, 258, 361, 496, 517, 778
SchI	GAGTC	1 cut(s)	616
ScrFI	CCNGG	3 cut(s)	433, 909, 964
SfaNI	GCATC	1 cut(s)	20
SfcI	CTRYAG	1 cut(s)	921
SfuI	TTCGAA	2 cut(s)	527, 873
SphI	GCATGC	1 cut(s)	1000
Sse9I	AATT	6 cut(s)	244, 365, 478, 580, 593, 892
SsiI	CCGC	7 cut(s)	5, 9, 131, 144, 165, 266, 452
SspMI	CTAG	2 cut(s)	501, 695
StyD4I	CCNGG	3 cut(s)	431, 907, 962
TaaI	ACNGT	2 cut(s)	90, 810
TaiI	ACGT	2 cut(s)	278, 858
TaqI	TCGA	4 cut(s)	223, 317, 527, 873
TaqII	GACCGA	1 cut(s)	198
TasI	AATT	6 cut(s)	244, 365, 478, 580, 593, 892
TauI	GCSGC	3 cut(s)	8, 11, 268
TfiI	GAWTC	6 cut(s)	124, 188, 253, 302, 314, 698
Tru1I	TTAA	1 cut(s)	1016
Tru9I	TTAA	1 cut(s)	1016
TscAI	CASTG	1 cut(s)	474
TseFI	GTSAC	2 cut(s)	630, 790
Tsp45I	GTSAC	2 cut(s)	630, 790
TspDTI	ATGAA	4 cut(s)	19, 335, 698, 886
TspGWI	ACGGA	2 cut(s)	361, 367
TspRI	CASTG	1 cut(s)	474
Tth111I	GACNNNGTC	1 cut(s)	606
XapI	RAATTY	4 cut(s)	244, 478, 593, 892
XceI	RCATGY	1 cut(s)	1000
XmiI	GTMKAC	1 cut(s)	437
XspI	CTAG	2 cut(s)	501, 695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.