Rh2CG598000

Protein of unknown function (DUF760)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0003339
Physical Location & Seq
Reverse (-)
77366338 .. 77370017
3680 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG598000.1

Sequence Viewer

Length: 834 bp
ATGGCGGCCGCAGCTCGGGCTTTCACTCTCTCTCGCCTCACCGACCTGTCACTCAAGCCCCGCCACCCACAACCACCACCGCCTCCCGTTTCCCGCCACCCCCTCCTCGCCCGCCCGTTACTCCCCTCCTTCCGCGCCCAACGGCGTCGTCCGGCCTGCTCGGCTTCCACAATCCGATGCCTCATCTCCGGCGTCGGCGGCGGCGGCGTGTCCGACGAGTTCGTCTCGACGCGGAAGTCCGGCTTCGACCGCGGTTTCTCCGTTATCGCCAATATGCTGAAGCGGATTGAGCCGCTTGACAGCTCCGTCATCTCCAAAGGCGTTTCCGATTCCGCTAAGGACTCGATGAAGCAGACCATCTCTACTATGCTCGGATTGCTGCCGTCCGATCAGTTCTCCGTCACCGTTAGGGTTAGCAGAGCTCCCCTTGATCGCCTCCTCGCCTCTTCCATAATCACCGGGTATACACTATGGAACGCGGAGTATCGGATATCGTTGATAAGGAATTTTGACATTTCTACGGAGAATTCTGTGGCTTTGTATGGGTCGAAGATAGATGGGAGTTCGGAGACGGTGGATGGTGAGGAAAGGGGTAGCGAGAATGGATTTGGGGCGAGTAATCAATACCTGGGCTCAACAACTCCTCAAGTTTTCGGGGATTTGTCTCCGGAGGCTTTGAATTACATCCAGAGGTTGCAATCAGAGTTAACTAATGTTAAGGAGGAACTGAAAGCTCAAAAGCAGGAAAATATGCAATTAGAATATGACACAGGACACAGAAATGATTTGTTGGATTATCTCCGGTCCTTGGATTCTAGTATGGTAATAAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF760

Protein Analysis

277

Amino Acids

30.31

Weight (kDa)

8.52

Isoelectric Point (pI)

49.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF760 PF05542 91 - 169 1.6e-22 Protein of unknown function (DUF760)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 221, 235, 305
AccI GTMKAC 1 cut(s) 464
AccII CGCG 4 cut(s) 135, 232, 252, 479
AccIII TCCGGA 1 cut(s) 667
AcoI YGGCCR 1 cut(s) 6
AcsI RAATTY 2 cut(s) 505, 526
AcuI CTGAAG 1 cut(s) 299
AcyI GRCGYC 2 cut(s) 145, 192
AfiI CCNNNNNNNGG 2 cut(s) 15, 808
AgsI TTSAA 1 cut(s) 679
AjnI CCWGG 1 cut(s) 627
AluBI AGCT 5 cut(s) 14, 303, 422, 734, 831
AluI AGCT 5 cut(s) 14, 303, 422, 734, 831
Alw21I GWGCWC 1 cut(s) 424
Alw26I GTCTC 3 cut(s) 229, 563, 669
Ama87I CYCGRG 1 cut(s) 15
Aor13HI TCCGGA 1 cut(s) 667
AoxI GGCC 2 cut(s) 6, 153
ApeKI GCWGC 2 cut(s) 11, 379
ApoI RAATTY 2 cut(s) 505, 526
AspLEI GCGC 1 cut(s) 137
AspS9I GGNCC 1 cut(s) 804
AsuC2I CCSGG 1 cut(s) 460
AsuHPI GGTGA 4 cut(s) 31, 394, 448, 593
AvaI CYCGRG 1 cut(s) 15
AvaII GGWCC 1 cut(s) 804
BanII GRGCYC 2 cut(s) 424, 635
Bbv12I GWGCWC 1 cut(s) 424
BbvI GCAGC 2 cut(s) 23, 366
BccI CCATC 3 cut(s) 365, 551, 572
BceAI ACGGC 2 cut(s) 158, 367
BciT130I CCWGG 1 cut(s) 629
BcnI CCSGG 1 cut(s) 460
BcoDI GTCTC 3 cut(s) 229, 563, 669
BfaI CTAG 1 cut(s) 816
BglI GCCNNNNNGGC 1 cut(s) 161
BisI GCNGC 8 cut(s) 6, 9, 12, 199, 202, 205, 293, 380
BlsI GCNGC 8 cut(s) 7, 10, 13, 200, 203, 206, 294, 381
Bme1390I CCNGG 2 cut(s) 460, 629
Bme18I GGWCC 1 cut(s) 804
BmeT110I CYCGRG 1 cut(s) 15
BmgT120I GGNCC 1 cut(s) 804
BmrFI CCNGG 2 cut(s) 460, 629
BmsI GCATC 1 cut(s) 167
BplI GAGNNNNNCTC 2 cut(s) 209, 241
Bpu10I CCTNAGC 1 cut(s) 336
BpuEI CTTGAG 2 cut(s) 38, 630
BpuMI CCSGG 1 cut(s) 460
BsaHI GRCGYC 2 cut(s) 145, 192
BsaJI CCNNGG 3 cut(s) 250, 628, 807
BsaWI WCCGGW 2 cut(s) 667, 801
Bsc4I CCNNNNNNNGG 2 cut(s) 15, 808
BseAI TCCGGA 1 cut(s) 667
BseBI CCWGG 1 cut(s) 629
BseDI CCNNGG 3 cut(s) 250, 628, 807
BseGI GGATG 2 cut(s) 583, 684
BseLI CCNNNNNNNGG 2 cut(s) 15, 808
BseRI GAGGAG 3 cut(s) 95, 428, 633
BseX3I CGGCCG 1 cut(s) 6
BseXI GCAGC 2 cut(s) 23, 366
Bsh1236I CGCG 4 cut(s) 135, 232, 252, 479
Bsh1285I CGRYCG 2 cut(s) 9, 250
BshFI GGCC 2 cut(s) 8, 155
BsiEI CGRYCG 2 cut(s) 9, 250
BsiHKAI GWGCWC 1 cut(s) 424
BsiHKCI CYCGRG 1 cut(s) 15
BsiSI CCGG 6 cut(s) 152, 189, 240, 459, 668, 802
BslI CCNNNNNNNGG 2 cut(s) 15, 808
BsmAI GTCTC 3 cut(s) 229, 563, 669
BsmBI CGTCTC 2 cut(s) 229, 563
BsnI GGCC 2 cut(s) 8, 155
BsoBI CYCGRG 1 cut(s) 15
Bsp1286I GDGCHC 2 cut(s) 424, 635
Bsp13I TCCGGA 1 cut(s) 667
Bsp143I GATC 2 cut(s) 388, 430
BspANI GGCC 2 cut(s) 8, 155
BspEI TCCGGA 1 cut(s) 667
BspFNI CGCG 4 cut(s) 135, 232, 252, 479
BssECI CCNNGG 3 cut(s) 250, 628, 807
BssMI GATC 2 cut(s) 388, 430
BssNAI GTATAC 1 cut(s) 465
BssNI GRCGYC 2 cut(s) 145, 192
BssT1I CCWWGG 1 cut(s) 807
Bst1107I GTATAC 1 cut(s) 465
Bst2UI CCWGG 1 cut(s) 629
Bst4CI ACNGT 2 cut(s) 406, 574
Bst6I CTCTTC 1 cut(s) 451
BstACI GRCGYC 2 cut(s) 145, 192
BstC8I GCNNGC 2 cut(s) 112, 157
BstDEI CTNAG 1 cut(s) 336
BstDSI CCRYGG 1 cut(s) 250
BstF5I GGATG 2 cut(s) 583, 684
BstFNI CGCG 4 cut(s) 135, 232, 252, 479
BstHHI GCGC 1 cut(s) 137
BstKTI GATC 2 cut(s) 391, 433
BstMAI GTCTC 3 cut(s) 229, 563, 669
BstMBI GATC 2 cut(s) 388, 430
BstMCI CGRYCG 2 cut(s) 9, 250
BstMWI GCNNNNNNNGC 8 cut(s) 11, 17, 161, 198, 204, 249, 289, 376
BstNI CCWGG 1 cut(s) 629
BstSCI CCNGG 2 cut(s) 458, 627
BstUI CGCG 4 cut(s) 135, 232, 252, 479
BstV1I GCAGC 2 cut(s) 23, 366
BstZ17I GTATAC 1 cut(s) 465
BstZI CGGCCG 1 cut(s) 6
BsuRI GGCC 2 cut(s) 8, 155
BtgI CCRYGG 1 cut(s) 250
BtsCI GGATG 2 cut(s) 583, 684
Cac8I GCNNGC 2 cut(s) 112, 157
CciNI GCGGCCGC 1 cut(s) 6
CfoI GCGC 1 cut(s) 137
Cfr13I GGNCC 1 cut(s) 804
Cfr42I CCGCGG 1 cut(s) 253
CseI GACGC 3 cut(s) 134, 181, 238
DdeI CTNAG 1 cut(s) 336
DpnI GATC 2 cut(s) 390, 432
DpnII GATC 2 cut(s) 388, 430
DrdI GACNNNNNNGTC 3 cut(s) 221, 235, 305
DseDI GACNNNNNNGTC 3 cut(s) 221, 235, 305
EaeI YGGCCR 1 cut(s) 6
EagI CGGCCG 1 cut(s) 6
Eam1104I CTCTTC 1 cut(s) 451
EarI CTCTTC 1 cut(s) 451
Ecl136II GAGCTC 1 cut(s) 422
EclXI CGGCCG 1 cut(s) 6
Eco130I CCWWGG 1 cut(s) 807
Eco24I GRGCYC 2 cut(s) 424, 635
Eco32I GATATC 1 cut(s) 492
Eco47I GGWCC 1 cut(s) 804
Eco52I CGGCCG 1 cut(s) 6
Eco53kI GAGCTC 1 cut(s) 422
Eco57I CTGAAG 1 cut(s) 299
Eco88I CYCGRG 1 cut(s) 15
EcoICRI GAGCTC 1 cut(s) 422
EcoRI GAATTC 1 cut(s) 526
EcoRII CCWGG 1 cut(s) 627
EcoRV GATATC 1 cut(s) 492
EcoT14I CCWWGG 1 cut(s) 807
EcoT38I GRGCYC 2 cut(s) 424, 635
ErhI CCWWGG 1 cut(s) 807
Esp3I CGTCTC 2 cut(s) 229, 563
FaiI YATR 9 cut(s) 275, 368, 452, 465, 472, 543, 752, 765, 821
FalI AAGNNNNNCTT 2 cut(s) 227, 259
FauI CCCGC 3 cut(s) 68, 101, 119
FblI GTMKAC 1 cut(s) 464
Fnu4HI GCNGC 8 cut(s) 6, 9, 12, 199, 202, 205, 293, 380
FokI GGATG 2 cut(s) 590, 671
FriOI GRGCYC 2 cut(s) 424, 635
Fsp4HI GCNGC 8 cut(s) 6, 9, 12, 199, 202, 205, 293, 380
FspBI CTAG 1 cut(s) 816
GlaI GCGC 1 cut(s) 136
GluI GCNGC 8 cut(s) 6, 9, 12, 199, 202, 205, 293, 380
HaeIII GGCC 2 cut(s) 8, 155
HapII CCGG 6 cut(s) 152, 189, 240, 459, 668, 802
HgaI GACGC 3 cut(s) 134, 181, 238
HhaI GCGC 1 cut(s) 137
Hin1I GRCGYC 2 cut(s) 145, 192
Hin6I GCGC 1 cut(s) 135
HinP1I GCGC 1 cut(s) 135
HincII GTYRAC 1 cut(s) 708
HindII GTYRAC 1 cut(s) 708
HinfI GANTC 3 cut(s) 329, 341, 812
HpaI GTTAAC 1 cut(s) 708
HpaII CCGG 6 cut(s) 152, 189, 240, 459, 668, 802
HphI GGTGA 4 cut(s) 31, 394, 448, 593
Hpy166II GTNNAC 2 cut(s) 465, 708
Hpy188I TCNGA 8 cut(s) 176, 214, 328, 374, 388, 489, 568, 703
Hpy188III TCNNGA 3 cut(s) 226, 668, 688
Hpy8I GTNNAC 2 cut(s) 465, 708
Hpy99I CGWCG 4 cut(s) 150, 197, 218, 232
HpyAV CCTTC 1 cut(s) 139
HpyCH4III ACNGT 2 cut(s) 406, 574
HpyCH4V TGCA 2 cut(s) 697, 754
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 17, 161, 198, 204, 249, 289, 376
HpyF3I CTNAG 1 cut(s) 336
Hsp92I GRCGYC 2 cut(s) 145, 192
HspAI GCGC 1 cut(s) 135
Kpn2I TCCGGA 1 cut(s) 667
KspAI GTTAAC 1 cut(s) 708
KspI CCGCGG 1 cut(s) 253
Kzo9I GATC 2 cut(s) 388, 430
LmnI GCTCC 2 cut(s) 308, 427
Lsp1109I GCAGC 2 cut(s) 23, 366
LweI GCATC 1 cut(s) 167
MaeI CTAG 1 cut(s) 816
MaeIII GTNAC 3 cut(s) 48, 117, 400
MalI GATC 2 cut(s) 390, 432
MboI GATC 2 cut(s) 388, 430
MboII GAAGA 2 cut(s) 438, 562
MhlI GDGCHC 2 cut(s) 424, 635
MluCI AATT 4 cut(s) 505, 526, 679, 755
MlyI GAGTC 1 cut(s) 335
MmeI TCCRAC 2 cut(s) 237, 771
MroI TCCGGA 1 cut(s) 667
MseI TTAA 2 cut(s) 707, 717
MslI CAYNNNNRTG 1 cut(s) 780
MspA1I CMGCKG 1 cut(s) 252
MspI CCGG 6 cut(s) 152, 189, 240, 459, 668, 802
MspR9I CCNGG 2 cut(s) 460, 629
MvaI CCWGG 1 cut(s) 629
MvnI CGCG 4 cut(s) 135, 232, 252, 479
MwoI GCNNNNNNNGC 8 cut(s) 11, 17, 161, 198, 204, 249, 289, 376
NciI CCSGG 1 cut(s) 460
NdeII GATC 2 cut(s) 388, 430
NmeAIII GCCGAG 1 cut(s) 140
NmuCI GTSAC 2 cut(s) 48, 400
NotI GCGGCCGC 1 cut(s) 6
PfeI GAWTC 2 cut(s) 329, 812
PkrI GCNGC 8 cut(s) 7, 10, 13, 200, 203, 206, 294, 381
PleI GAGTC 1 cut(s) 335
PpsI GAGTC 1 cut(s) 335
Psp124BI GAGCTC 1 cut(s) 424
Psp6I CCWGG 1 cut(s) 627
PspGI CCWGG 1 cut(s) 627
PspPI GGNCC 1 cut(s) 804
RseI CAYNNNNRTG 1 cut(s) 780
SacI GAGCTC 1 cut(s) 424
SacII CCGCGG 1 cut(s) 253
SaqAI TTAA 2 cut(s) 707, 717
SatI GCNGC 8 cut(s) 6, 9, 12, 199, 202, 205, 293, 380
Sau3AI GATC 2 cut(s) 388, 430
Sau96I GGNCC 1 cut(s) 804
SchI GAGTC 1 cut(s) 335
ScrFI CCNGG 2 cut(s) 460, 629
SduI GDGCHC 2 cut(s) 424, 635
SetI ASST 8 cut(s) 16, 48, 305, 424, 630, 695, 736, 833
SfaNI GCATC 1 cut(s) 167
Sfr303I CCGCGG 1 cut(s) 253
SgrBI CCGCGG 1 cut(s) 253
SinI GGWCC 1 cut(s) 804
SmiMI CAYNNNNRTG 1 cut(s) 780
SmlI CTYRAG 2 cut(s) 53, 645
SmoI CTYRAG 2 cut(s) 53, 645
Sse9I AATT 4 cut(s) 505, 526, 679, 755
SspMI CTAG 1 cut(s) 816
SstI GAGCTC 1 cut(s) 424
StyD4I CCNGG 2 cut(s) 458, 627
StyI CCWWGG 1 cut(s) 807
TaaI ACNGT 2 cut(s) 406, 574
TaqI TCGA 4 cut(s) 227, 246, 344, 548
TasI AATT 4 cut(s) 505, 526, 679, 755
TauI GCSGC 6 cut(s) 8, 11, 201, 204, 207, 295
TfiI GAWTC 2 cut(s) 329, 812
Tru1I TTAA 2 cut(s) 707, 717
Tru9I TTAA 2 cut(s) 707, 717
TseFI GTSAC 2 cut(s) 48, 400
TseI GCWGC 2 cut(s) 11, 379
Tsp45I GTSAC 2 cut(s) 48, 400
TspDTI ATGAA 1 cut(s) 362
TspGWI ACGGA 4 cut(s) 250, 295, 388, 536
VpaK11BI GGWCC 1 cut(s) 804
XapI RAATTY 2 cut(s) 505, 526
XmiI GTMKAC 1 cut(s) 464
XspI CTAG 1 cut(s) 816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.