Rmu_sc0003415.1_g000008

Protein of unknown function (DUF760)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003415.1
Physical Location & Seq
Forward (+)
39752 .. 40947
1196 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003415.1_g000008.1.cds

Sequence Viewer

Length: 372 bp
atgctgaagcggattgagccgcttgacagctccgttatctccaaaggcgtttccgattccgctaaggactcgatgaagcagaccatctctactatgcttggattgctgccgtccgatcagttctccgtcaccgttaggttaggtgacagctccccttccaccaattcacaagatgtattcacagaggctgaatcacatagcacggatgtttcaggagcatcagctcctaggaaattggaattccatacacttgaaggctcaggggggtatccgcccactgtttcagaagatgaattcatagagggtgaagcacatagaagagatgtcacaggagcatcaactcctatggcagtggaattgaaccagacttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

123

Amino Acids

13.1

Weight (kDa)

4.61

Isoelectric Point (pI)

49.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 10, 20, 60, 272
AcsI RAATTY 2 cut(s) 239, 293
AcuI CTGAAG 1 cut(s) 26
AgsI TTSAA 2 cut(s) 254, 361
AluBI AGCT 3 cut(s) 30, 150, 224
AluI AGCT 3 cut(s) 30, 150, 224
AlwNI CAGNNNCTG 1 cut(s) 188
ApeKI GCWGC 1 cut(s) 106
ApoI RAATTY 2 cut(s) 239, 293
AspA2I CCTAGG 1 cut(s) 227
AsuHPI GGTGA 3 cut(s) 121, 155, 317
AvrII CCTAGG 1 cut(s) 227
BbvI GCAGC 1 cut(s) 93
BccI CCATC 1 cut(s) 92
BceAI ACGGC 1 cut(s) 94
BciVI GTATCC 1 cut(s) 279
BfaI CTAG 1 cut(s) 228
BfuI GTATCC 1 cut(s) 279
BisI GCNGC 2 cut(s) 20, 107
BlnI CCTAGG 1 cut(s) 227
BlsI GCNGC 2 cut(s) 21, 108
BmsI GCATC 2 cut(s) 227, 344
Bpu10I CCTNAGC 2 cut(s) 63, 259
BsaJI CCNNGG 1 cut(s) 227
BseDI CCNNGG 1 cut(s) 227
BseGI GGATG 1 cut(s) 211
BseMII CTCAG 1 cut(s) 273
BseXI GCAGC 1 cut(s) 93
Bsp143I GATC 1 cut(s) 115
BspACI CCGC 4 cut(s) 10, 20, 60, 272
BspCNI CTCAG 1 cut(s) 272
BssECI CCNNGG 1 cut(s) 227
BssMI GATC 1 cut(s) 115
BssT1I CCWWGG 1 cut(s) 227
Bst4CI ACNGT 2 cut(s) 133, 280
Bst6I CTCTTC 1 cut(s) 313
BstDEI CTNAG 2 cut(s) 63, 259
BstF5I GGATG 1 cut(s) 211
BstKTI GATC 1 cut(s) 118
BstMBI GATC 1 cut(s) 115
BstMWI GCNNNNNNNGC 2 cut(s) 16, 103
BstV1I GCAGC 1 cut(s) 93
BsuI GTATCC 1 cut(s) 279
BtsCI GGATG 1 cut(s) 211
BtsI GCAGTG 1 cut(s) 357
BtsIMutI CAGTG 2 cut(s) 276, 357
CaiI CAGNNNCTG 1 cut(s) 188
CviJI RGCY 6 cut(s) 19, 30, 150, 188, 224, 258
CviKI_1 RGCY 6 cut(s) 19, 30, 150, 188, 224, 258
DdeI CTNAG 2 cut(s) 63, 259
DpnI GATC 1 cut(s) 117
DpnII GATC 1 cut(s) 115
Eam1104I CTCTTC 1 cut(s) 313
EarI CTCTTC 1 cut(s) 313
EciI GGCGGA 1 cut(s) 261
Eco130I CCWWGG 1 cut(s) 227
Eco57I CTGAAG 1 cut(s) 26
EcoRI GAATTC 2 cut(s) 239, 293
EcoT14I CCWWGG 1 cut(s) 227
ErhI CCWWGG 1 cut(s) 227
FaiI YATR 6 cut(s) 95, 198, 246, 299, 315, 347
Fnu4HI GCNGC 2 cut(s) 20, 107
FokI GGATG 1 cut(s) 218
Fsp4HI GCNGC 2 cut(s) 20, 107
FspBI CTAG 1 cut(s) 228
GluI GCNGC 2 cut(s) 20, 107
HinfI GANTC 3 cut(s) 56, 68, 191
HphI GGTGA 3 cut(s) 121, 155, 317
Hpy188I TCNGA 3 cut(s) 55, 115, 286
Hpy188III TCNNGA 1 cut(s) 213
HpyAV CCTTC 2 cut(s) 165, 248
HpyCH4III ACNGT 2 cut(s) 133, 280
HpyF10VI GCNNNNNNNGC 2 cut(s) 16, 103
HpyF3I CTNAG 2 cut(s) 63, 259
Kzo9I GATC 1 cut(s) 115
LmnI GCTCC 5 cut(s) 35, 155, 215, 229, 332
LpnPI CCDG 3 cut(s) 198, 246, 315
Lsp1109I GCAGC 1 cut(s) 93
LweI GCATC 2 cut(s) 227, 344
MaeI CTAG 1 cut(s) 228
MaeIII GTNAC 3 cut(s) 127, 143, 325
MalI GATC 1 cut(s) 117
MboI GATC 1 cut(s) 115
MboII GAAGA 2 cut(s) 299, 330
MluCI AATT 5 cut(s) 163, 233, 239, 293, 356
MlyI GAGTC 1 cut(s) 62
MnlI CCTC 2 cut(s) 178, 295
MseI TTAA 1 cut(s) 370
MwoI GCNNNNNNNGC 2 cut(s) 16, 103
NdeII GATC 1 cut(s) 115
NmuCI GTSAC 3 cut(s) 127, 143, 325
PfeI GAWTC 2 cut(s) 56, 191
PkrI GCNGC 2 cut(s) 21, 108
PleI GAGTC 1 cut(s) 62
PpsI GAGTC 1 cut(s) 62
PstNI CAGNNNCTG 1 cut(s) 188
SaqAI TTAA 1 cut(s) 370
SatI GCNGC 2 cut(s) 20, 107
Sau3AI GATC 1 cut(s) 115
SchI GAGTC 1 cut(s) 62
SetI ASST 5 cut(s) 32, 140, 145, 152, 226
SfaNI GCATC 2 cut(s) 227, 344
Sse9I AATT 5 cut(s) 163, 233, 239, 293, 356
SsiI CCGC 4 cut(s) 10, 20, 60, 272
SspMI CTAG 1 cut(s) 228
StyI CCWWGG 1 cut(s) 227
TaaI ACNGT 2 cut(s) 133, 280
TaqI TCGA 1 cut(s) 71
TasI AATT 5 cut(s) 163, 233, 239, 293, 356
TauI GCSGC 1 cut(s) 22
TfiI GAWTC 2 cut(s) 56, 191
Tru1I TTAA 1 cut(s) 370
Tru9I TTAA 1 cut(s) 370
TscAI CASTG 2 cut(s) 283, 357
TseFI GTSAC 3 cut(s) 127, 143, 325
TseI GCWGC 1 cut(s) 106
Tsp45I GTSAC 3 cut(s) 127, 143, 325
TspDTI ATGAA 3 cut(s) 89, 286, 306
TspGWI ACGGA 3 cut(s) 22, 115, 218
TspRI CASTG 2 cut(s) 283, 357
XapI RAATTY 2 cut(s) 239, 293
XmaJI CCTAGG 1 cut(s) 227
XspI CTAG 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.