AT5G40870

belongs to the uridine kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0003508
Physical Location & Seq
Forward (+)
16374799 .. 16378652
3854 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G40870.1

Sequence Viewer

Length: 1461 bp
ATGCCGGAAGATTCTTCTTCTTTAGACTACGCGATGGAGAAGGCATCAGGGCCTCACTTCTCCGGTCTTCGCTTCGACGGCCTTCTCTCTTCTTCTCCACCCAATTCCTCCGTCGTCTCTTCACTCCGATCAGCTGTTTCTTCTTCTTCTCCGTCTTCTTCCGATCCCGAAGCGCCTAAGCAGCCCTTCATTATCGGGGTTTCTGGTGGTACGGCTTCTGGTAAGACCACGGTCTGTGACATGATAATCCAGCAACTTCATGACCATCGTGTCGTTTTAGTTAATCAGGATTCCTTTTATCGTGGTTTGACATCTGAGGAGTTGCAGCGTGTGCAAGAGTATAACTTTGATCATCCTGATGCGTTTGACACTGAGCAGCTTTTGCATTGTGCTGAGACTCTCAAGAGCGGGCAACCCTATCAAGTTCCAATCTATGACTTTAAGACTCATCAACGTAGATCTGATACTTTCCGCCAGGTCAATGCTTCTGATGTAATAATATTGGAAGGGATTCTAGTTTTCCATGACTCACGAGTTCGGAATCTGATGAATATGAAGATCTTTGTTGATACAGATGCTGATGTAAGGCTTGCTCGCAGAATTAGGCGTGACACAGTTGAGAGGGGTAGGGATGTCAATTCTGTGCTTGAACAGTATGCAAAGTTTGTGAAGCCGGCATTTGATGACTTCGTGCTCCCTTCAAAGAAATATGCTGACGTGATCATTCCTCGAGGAGGTGATAATCACGTTGCAGTCGATTTGATTACGCAACATATCCACACAAAACTTGGGCAGCATGATCTCTGCAAAATCTACCCAAATGTTTATGTTATCCAGTCAACATTTCAGATAAGAGGCATGCATACACTTATTCGGGAAAAGGACATATCAAAGCATGACTTTGTGTTTTATTCAGATAGACTCATTCGTCTGGTCGTGGAGCATGGTCTTGGTCATTTGCCATTCACTGAGAAACAAGTAGTTACTCCAACAGGAGCTGTATATACCGGTGTTGATTTCTGCAAGAAACTTTGTGGGGTCTCAATTATTAGAAGTGGTGAAAGCATGGAAAATGCATTACGCGCTTGCTGCAAAGGAATTAAAATAGGGAAGATTCTCATCCACCGTGATGGCGATAATGGAAAACAGCTTATTTATGAGAAGCTTCCTCACGACATATCTGAACGCCATGTCCTGCTTCTAGATCCTGTCTTAGCCACAGGTAACTCGGCTAATCAAGCCATTGAACTACTCATACAGAAAGGTGTTCCTGAAGCTCACATTATATTCCTCAACCTTATATCGGCGCCGGAGGGAATCCACTGTGTCTGCAAACGTTTTCCAGCATTGAAAATTGTGACGTCTGAAATAGACCAATGTCTGAACCAAGAATTCAGAGTTATACCGGGCTTAGGCGAGTTTGGCGATCGTTACTTCGGCACCGACGAGGAAGACCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004845 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006109 GO:0006139 GO:0006206 GO:0006207 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009507 GO:0009536 GO:0009889 GO:0009987 GO:0010138 GO:0010556 GO:0010675 GO:0010962 GO:0016301 GO:0016310 GO:0016740 GO:0016757 GO:0016763 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019222 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0031323 GO:0031326 GO:0032262 GO:0032881 GO:0032885 GO:0032950 GO:0032951 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043173 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043255 GO:0043455 GO:0044206 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0050789 GO:0050794 GO:0055086 GO:0060255 GO:0065007 GO:0071704 GO:0072527 GO:0072528 GO:0080090 GO:0090407 GO:1900376 GO:1901135 GO:1901137 GO:1901141 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:2000112 GO:2000762 GO:2000904 GO:2001006
KEGG Pathways
Metabolic & Signaling
ko00030 ko00040 ko00240 ko00710 ko00983 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00030 map00040 map00240 map00710 map00983 map01100 map01110 map01120 map01130 map01200 map01230
Pfam Domains
Protein Families
PRK UPRTase

Protein Analysis

486

Amino Acids

54.43

Weight (kDa)

6.13

Isoelectric Point (pI)

44.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PRK PF00485 64 - 250 2.4e-48 Phosphoribulokinase / Uridine kinase family
UPRTase PF14681 280 - 481 1e-74 Uracil phosphoribosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 269, 927
AatII GACGTC 1 cut(s) 1364
AbsI CCTCGAGG 1 cut(s) 729
AccB1I GGYRCC 2 cut(s) 1306, 1439
AccBSI CCGCTC 1 cut(s) 408
AccII CGCG 2 cut(s) 32, 1083
AciI CCGC 2 cut(s) 408, 472
AclI AACGTT 1 cut(s) 1336
AclWI GGATC 2 cut(s) 158, 1199
AcsI RAATTY 1 cut(s) 1391
AcuI CTGAAG 1 cut(s) 1293
AcyI GRCGYC 2 cut(s) 1307, 1361
AfaI GTAC 1 cut(s) 211
AfiI CCNNNNNNNGG 3 cut(s) 734, 1303, 1412
AgeI ACCGGT 1 cut(s) 1007
AgsI TTSAA 4 cut(s) 650, 702, 1247, 1351
AjiI CACGTC 1 cut(s) 718
AjnI CCWGG 1 cut(s) 474
AloI GAACNNNNNNTCC 2 cut(s) 1176, 1208
AluBI AGCT 6 cut(s) 134, 379, 998, 1150, 1165, 1277
AluI AGCT 6 cut(s) 134, 379, 998, 1150, 1165, 1277
Alw21I GWGCWC 1 cut(s) 696
Alw26I GTCTC 3 cut(s) 121, 389, 1045
AlwI GGATC 2 cut(s) 158, 1199
AlwNI CAGNNNCTG 2 cut(s) 578, 998
Ama87I CYCGRG 1 cut(s) 729
AoxI GGCC 2 cut(s) 50, 79
ApeKI GCWGC 5 cut(s) 181, 325, 376, 793, 1089
ApoI RAATTY 1 cut(s) 1391
AsiGI ACCGGT 1 cut(s) 1007
Asp700I GAANNNNTTC 1 cut(s) 510
AspLEI GCGC 3 cut(s) 175, 1085, 1309
AspS9I GGNCC 1 cut(s) 50
AsuC2I CCSGG 1 cut(s) 1407
AsuHPI GGTGA 2 cut(s) 749, 1070
AvaI CYCGRG 1 cut(s) 729
BanI GGYRCC 2 cut(s) 1306, 1439
BauI CACGAG 1 cut(s) 531
BbsI GAAGAC 2 cut(s) 59, 147
Bbv12I GWGCWC 1 cut(s) 696
BbvI GCAGC 5 cut(s) 193, 337, 388, 805, 1076
BccI CCATC 3 cut(s) 28, 273, 1124
BceAI ACGGC 2 cut(s) 94, 228
BciT130I CCWGG 1 cut(s) 476
BclI TGATCA 2 cut(s) 349, 720
BcnI CCSGG 1 cut(s) 1407
BcoDI GTCTC 3 cut(s) 121, 389, 1045
BfaI CTAG 2 cut(s) 515, 1202
BfoI RGCGCY 2 cut(s) 176, 1310
BglII AGATCT 2 cut(s) 458, 558
BisI GCNGC 5 cut(s) 182, 326, 377, 794, 1090
BlsI GCNGC 5 cut(s) 183, 327, 378, 795, 1091
Bme1390I CCNGG 2 cut(s) 476, 1407
BmeT110I CYCGRG 1 cut(s) 729
BmgBI CACGTC 1 cut(s) 718
BmgT120I GGNCC 1 cut(s) 50
BmiI GGNNCC 2 cut(s) 1308, 1441
BmrFI CCNGG 2 cut(s) 476, 1407
BmsI GCATC 3 cut(s) 53, 349, 565
BoxI GACNNNNGTC 2 cut(s) 230, 1377
BpiI GAAGAC 2 cut(s) 59, 147
Bpu10I CCTNAGC 2 cut(s) 177, 1411
BpuEI CTTGAG 1 cut(s) 386
BpuMI CCSGG 1 cut(s) 1407
BsaBI GATNNNNATC 1 cut(s) 1118
BsaHI GRCGYC 2 cut(s) 1307, 1361
BsaI GGTCTC 1 cut(s) 1045
BsaJI CCNNGG 1 cut(s) 228
BsaWI WCCGGW 2 cut(s) 62, 1007
Bsc4I CCNNNNNNNGG 3 cut(s) 734, 1303, 1412
Bse118I RCCGGY 2 cut(s) 673, 1007
Bse1I ACTGG 2 cut(s) 835, 1456
Bse8I GATNNNNATC 1 cut(s) 1118
BseBI CCWGG 1 cut(s) 476
BseDI CCNNGG 1 cut(s) 228
BseGI GGATG 3 cut(s) 352, 637, 1119
BseJI GATNNNNATC 1 cut(s) 1118
BseLI CCNNNNNNNGG 3 cut(s) 734, 1303, 1412
BseMII CTCAG 4 cut(s) 306, 363, 384, 960
BseNI ACTGG 2 cut(s) 835, 1456
BseRI GAGGAG 2 cut(s) 332, 747
BseXI GCAGC 5 cut(s) 193, 337, 388, 805, 1076
Bsh1236I CGCG 2 cut(s) 32, 1083
Bsh1285I CGRYCG 1 cut(s) 1429
BshFI GGCC 2 cut(s) 52, 81
BshNI GGYRCC 2 cut(s) 1306, 1439
BshTI ACCGGT 1 cut(s) 1007
BsiEI CGRYCG 1 cut(s) 1429
BsiHKAI GWGCWC 1 cut(s) 696
BsiHKCI CYCGRG 1 cut(s) 729
BsiSI CCGG 6 cut(s) 5, 63, 674, 1008, 1310, 1406
BslI CCNNNNNNNGG 3 cut(s) 734, 1303, 1412
BsmAI GTCTC 3 cut(s) 121, 389, 1045
BsmBI CGTCTC 1 cut(s) 121
BsnI GGCC 2 cut(s) 52, 81
Bso31I GGTCTC 1 cut(s) 1045
BsoBI CYCGRG 1 cut(s) 729
Bsp1286I GDGCHC 1 cut(s) 696
Bsp143I GATC 9 cut(s) 128, 163, 349, 458, 558, 720, 799, 1204, 1426
BspACI CCGC 2 cut(s) 408, 472
BspANI GGCC 2 cut(s) 52, 81
BspCNI CTCAG 4 cut(s) 307, 364, 385, 961
BspFNI CGCG 2 cut(s) 32, 1083
BspHI TCATGA 1 cut(s) 259
BspLI GGNNCC 2 cut(s) 1308, 1441
BspPI GGATC 2 cut(s) 158, 1199
BspT107I GGYRCC 2 cut(s) 1306, 1439
BspTNI GGTCTC 1 cut(s) 1045
BsrBI CCGCTC 1 cut(s) 408
BsrFI RCCGGY 2 cut(s) 673, 1007
BsrI ACTGG 2 cut(s) 835, 1456
BssAI RCCGGY 2 cut(s) 673, 1007
BssECI CCNNGG 1 cut(s) 228
BssMI GATC 9 cut(s) 128, 163, 349, 458, 558, 720, 799, 1204, 1426
BssNI GRCGYC 2 cut(s) 1307, 1361
BssSI CACGAG 1 cut(s) 531
Bst2BI CACGAG 1 cut(s) 531
Bst2UI CCWGG 1 cut(s) 476
Bst4CI ACNGT 5 cut(s) 232, 616, 654, 1127, 1325
Bst6I CTCTTC 2 cut(s) 94, 124
BstACI GRCGYC 2 cut(s) 1307, 1361
BstAPI GCANNNNNTGC 2 cut(s) 331, 382
BstC8I GCNNGC 6 cut(s) 410, 591, 595, 675, 860, 1087
BstDEI CTNAG 7 cut(s) 177, 315, 372, 393, 969, 1213, 1411
BstDSI CCRYGG 1 cut(s) 228
BstENI CCTNNNNNAGG 1 cut(s) 732
BstF5I GGATG 3 cut(s) 352, 637, 1119
BstFNI CGCG 2 cut(s) 32, 1083
BstH2I RGCGCY 2 cut(s) 176, 1310
BstHHI GCGC 3 cut(s) 175, 1085, 1309
BstKTI GATC 9 cut(s) 131, 166, 352, 461, 561, 723, 802, 1207, 1429
BstMAI GTCTC 3 cut(s) 121, 389, 1045
BstMBI GATC 9 cut(s) 128, 163, 349, 458, 558, 720, 799, 1204, 1426
BstMCI CGRYCG 1 cut(s) 1429
BstMWI GCNNNNNNNGC 8 cut(s) 78, 181, 331, 382, 1082, 1089, 1238, 1422
BstNI CCWGG 1 cut(s) 476
BstNSI RCATGY 1 cut(s) 862
BstPAI GACNNNNGTC 2 cut(s) 230, 1377
BstSCI CCNGG 2 cut(s) 474, 1405
BstUI CGCG 2 cut(s) 32, 1083
BstV1I GCAGC 5 cut(s) 193, 337, 388, 805, 1076
BstV2I GAAGAC 2 cut(s) 59, 147
BstX2I RGATCY 3 cut(s) 458, 558, 1204
BstXI CCANNNNNNTGG 1 cut(s) 1130
BstYI RGATCY 3 cut(s) 458, 558, 1204
BsuRI GGCC 2 cut(s) 52, 81
BtgI CCRYGG 1 cut(s) 228
BtgZI GCGATG 1 cut(s) 47
BtrI CACGTC 1 cut(s) 718
BtsCI GGATG 3 cut(s) 352, 637, 1119
BtsIMutI CAGTG 3 cut(s) 369, 966, 1321
Cac8I GCNNGC 6 cut(s) 410, 591, 595, 675, 860, 1087
CaiI CAGNNNCTG 2 cut(s) 578, 998
CciI TCATGA 1 cut(s) 259
CfoI GCGC 3 cut(s) 175, 1085, 1309
Cfr10I RCCGGY 2 cut(s) 673, 1007
Cfr13I GGNCC 1 cut(s) 50
Csp6I GTAC 1 cut(s) 210
CspAI ACCGGT 1 cut(s) 1007
CviAII CATG 9 cut(s) 241, 260, 524, 797, 859, 896, 944, 1066, 1190
CviQI GTAC 1 cut(s) 210
DdeI CTNAG 7 cut(s) 177, 315, 372, 393, 969, 1213, 1411
DinI GGCGCC 1 cut(s) 1308
DpnI GATC 9 cut(s) 130, 165, 351, 460, 560, 722, 801, 1206, 1428
DpnII GATC 9 cut(s) 128, 163, 349, 458, 558, 720, 799, 1204, 1426
DrdI GACNNNNNNGTC 2 cut(s) 269, 927
DseDI GACNNNNNNGTC 2 cut(s) 269, 927
Eam1104I CTCTTC 2 cut(s) 94, 124
EarI CTCTTC 2 cut(s) 94, 124
EciI GGCGGA 1 cut(s) 461
Eco31I GGTCTC 1 cut(s) 1045
Eco57I CTGAAG 1 cut(s) 1293
Eco88I CYCGRG 1 cut(s) 729
EcoNI CCTNNNNNAGG 1 cut(s) 732
EcoO109I RGGNCCY 1 cut(s) 50
EcoRI GAATTC 1 cut(s) 1391
EcoRII CCWGG 1 cut(s) 474
EcoT22I ATGCAT 2 cut(s) 864, 1078
EgeI GGCGCC 1 cut(s) 1308
EheI GGCGCC 1 cut(s) 1308
Esp3I CGTCTC 1 cut(s) 121
FaeI CATG 9 cut(s) 244, 263, 527, 800, 862, 899, 947, 1069, 1193
FalI AAGNNNNNCTT 4 cut(s) 170, 202, 884, 916
FatI CATG 9 cut(s) 240, 259, 523, 796, 858, 895, 943, 1065, 1189
FauI CCCGC 1 cut(s) 401
FbaI TGATCA 2 cut(s) 349, 720
Fnu4HI GCNGC 5 cut(s) 182, 326, 377, 794, 1090
FokI GGATG 3 cut(s) 339, 644, 1106
Fsp4HI GCNGC 5 cut(s) 182, 326, 377, 794, 1090
FspBI CTAG 2 cut(s) 515, 1202
GlaI GCGC 3 cut(s) 174, 1084, 1308
GluI GCNGC 5 cut(s) 182, 326, 377, 794, 1090
HaeII RGCGCY 2 cut(s) 176, 1310
HaeIII GGCC 2 cut(s) 52, 81
HapII CCGG 6 cut(s) 5, 63, 674, 1008, 1310, 1406
HhaI GCGC 3 cut(s) 175, 1085, 1309
Hin1I GRCGYC 2 cut(s) 1307, 1361
Hin1II CATG 9 cut(s) 244, 263, 527, 800, 862, 899, 947, 1069, 1193
Hin6I GCGC 3 cut(s) 173, 1083, 1307
HinP1I GCGC 3 cut(s) 173, 1083, 1307
HincII GTYRAC 1 cut(s) 840
HindII GTYRAC 1 cut(s) 840
HindIII AAGCTT 1 cut(s) 1163
HpaII CCGG 6 cut(s) 5, 63, 674, 1008, 1310, 1406
HphI GGTGA 2 cut(s) 749, 1070
Hpy166II GTNNAC 1 cut(s) 840
Hpy8I GTNNAC 1 cut(s) 840
Hpy99I CGWCG 3 cut(s) 80, 116, 1448
HpyAV CCTTC 5 cut(s) 34, 92, 196, 500, 708
HpyCH4III ACNGT 5 cut(s) 232, 616, 654, 1127, 1325
HpyCH4IV ACGT 5 cut(s) 454, 717, 747, 1336, 1361
HpyF10VI GCNNNNNNNGC 8 cut(s) 78, 181, 331, 382, 1082, 1089, 1238, 1422
HpyF3I CTNAG 7 cut(s) 177, 315, 372, 393, 969, 1213, 1411
HpySE526I ACGT 5 cut(s) 454, 717, 747, 1336, 1361
Hsp92I GRCGYC 2 cut(s) 1307, 1361
Hsp92II CATG 9 cut(s) 244, 263, 527, 800, 862, 899, 947, 1069, 1193
HspAI GCGC 3 cut(s) 173, 1083, 1307
KasI GGCGCC 1 cut(s) 1306
KroI GCCGGC 1 cut(s) 673
KroNI GCCGGC 1 cut(s) 675
Ksp22I TGATCA 2 cut(s) 349, 720
Kzo9I GATC 9 cut(s) 128, 163, 349, 458, 558, 720, 799, 1204, 1426
LmnI GCTCC 3 cut(s) 699, 940, 995
Lsp1109I GCAGC 5 cut(s) 193, 337, 388, 805, 1076
LweI GCATC 3 cut(s) 53, 349, 565
MaeI CTAG 2 cut(s) 515, 1202
MaeII ACGT 5 cut(s) 454, 717, 747, 1336, 1361
MaeIII GTNAC 6 cut(s) 236, 608, 982, 1223, 1357, 1430
MalI GATC 9 cut(s) 130, 165, 351, 460, 560, 722, 801, 1206, 1428
MbiI CCGCTC 1 cut(s) 408
MboI GATC 9 cut(s) 128, 163, 349, 458, 558, 720, 799, 1204, 1426
MflI RGATCY 3 cut(s) 458, 558, 1204
MhlI GDGCHC 1 cut(s) 696
MluCI AATT 7 cut(s) 103, 600, 637, 1044, 1098, 1353, 1391
Mly113I GGCGCC 1 cut(s) 1307
MlyI GAGTC 4 cut(s) 391, 439, 521, 915
MmeI TCCRAC 1 cut(s) 1013
Mph1103I ATGCAT 2 cut(s) 864, 1078
MroNI GCCGGC 1 cut(s) 673
MroXI GAANNNNTTC 1 cut(s) 510
MseI TTAA 3 cut(s) 282, 441, 1101
MslI CAYNNNNRTG 2 cut(s) 357, 1128
MspA1I CMGCKG 1 cut(s) 134
MspI CCGG 6 cut(s) 5, 63, 674, 1008, 1310, 1406
MspR9I CCNGG 2 cut(s) 476, 1407
MvaI CCWGG 1 cut(s) 476
MvnI CGCG 2 cut(s) 32, 1083
MwoI GCNNNNNNNGC 8 cut(s) 78, 181, 331, 382, 1082, 1089, 1238, 1422
NaeI GCCGGC 1 cut(s) 675
NarI GGCGCC 1 cut(s) 1307
NciI CCSGG 1 cut(s) 1407
NdeII GATC 9 cut(s) 128, 163, 349, 458, 558, 720, 799, 1204, 1426
NgoMIV GCCGGC 1 cut(s) 673
NlaIII CATG 9 cut(s) 244, 263, 527, 800, 862, 899, 947, 1069, 1193
NlaIV GGNNCC 2 cut(s) 1308, 1441
NmeAIII GCCGAG 1 cut(s) 1208
NmuCI GTSAC 3 cut(s) 236, 608, 1357
NsiI ATGCAT 2 cut(s) 864, 1078
NspI RCATGY 1 cut(s) 862
PaeI GCATGC 1 cut(s) 862
PaeR7I CTCGAG 1 cut(s) 729
PagI TCATGA 1 cut(s) 259
PcsI WCGNNNNNNNCGW 2 cut(s) 753, 1443
PdiI GCCGGC 1 cut(s) 675
PdmI GAANNNNTTC 1 cut(s) 510
PfeI GAWTC 6 cut(s) 11, 290, 511, 541, 1114, 1317
PinAI ACCGGT 1 cut(s) 1007
PkrI GCNGC 5 cut(s) 183, 327, 378, 795, 1091
Ple19I CGATCG 1 cut(s) 1429
PleI GAGTC 4 cut(s) 391, 439, 521, 915
PluTI GGCGCC 1 cut(s) 1310
PpsI GAGTC 4 cut(s) 391, 439, 521, 915
PshAI GACNNNNGTC 2 cut(s) 230, 1377
Psp1406I AACGTT 1 cut(s) 1336
Psp6I CCWGG 1 cut(s) 474
PspGI CCWGG 1 cut(s) 474
PspN4I GGNNCC 2 cut(s) 1308, 1441
PspPI GGNCC 1 cut(s) 50
PspXI VCTCGAGB 1 cut(s) 729
PsrI GAACNNNNNNTAC 2 cut(s) 1239, 1271
PstNI CAGNNNCTG 2 cut(s) 578, 998
PsuI RGATCY 3 cut(s) 458, 558, 1204
PvuI CGATCG 1 cut(s) 1429
PvuII CAGCTG 1 cut(s) 134
RsaI GTAC 1 cut(s) 211
RsaNI GTAC 1 cut(s) 210
RseI CAYNNNNRTG 2 cut(s) 357, 1128
SaqAI TTAA 3 cut(s) 282, 441, 1101
SatI GCNGC 5 cut(s) 182, 326, 377, 794, 1090
Sau3AI GATC 9 cut(s) 128, 163, 349, 458, 558, 720, 799, 1204, 1426
Sau96I GGNCC 1 cut(s) 50
SchI GAGTC 4 cut(s) 391, 439, 521, 915
ScrFI CCNGG 2 cut(s) 476, 1407
SduI GDGCHC 1 cut(s) 696
SfaNI GCATC 3 cut(s) 53, 349, 565
SfoI GGCGCC 1 cut(s) 1308
Sfr274I CTCGAG 1 cut(s) 729
SlaI CTCGAG 1 cut(s) 729
SmiMI CAYNNNNRTG 2 cut(s) 357, 1128
SmlI CTYRAG 2 cut(s) 401, 729
SmoI CTYRAG 2 cut(s) 401, 729
SphI GCATGC 1 cut(s) 862
Sse9I AATT 7 cut(s) 103, 600, 637, 1044, 1098, 1353, 1391
SsiI CCGC 2 cut(s) 408, 472
SspDI GGCGCC 1 cut(s) 1306
SspI AATATT 1 cut(s) 501
SspMI CTAG 2 cut(s) 515, 1202
StyD4I CCNGG 2 cut(s) 474, 1405
TaaI ACNGT 5 cut(s) 232, 616, 654, 1127, 1325
TaiI ACGT 5 cut(s) 457, 720, 750, 1339, 1364
TaqI TCGA 3 cut(s) 75, 730, 756
TasI AATT 7 cut(s) 103, 600, 637, 1044, 1098, 1353, 1391
TfiI GAWTC 6 cut(s) 11, 290, 511, 541, 1114, 1317
Tru1I TTAA 3 cut(s) 282, 441, 1101
Tru9I TTAA 3 cut(s) 282, 441, 1101
TscAI CASTG 3 cut(s) 376, 973, 1328
TseFI GTSAC 3 cut(s) 236, 608, 1357
TseI GCWGC 5 cut(s) 181, 325, 376, 793, 1089
Tsp45I GTSAC 3 cut(s) 236, 608, 1357
TspDTI ATGAA 4 cut(s) 178, 248, 563, 569
TspGWI ACGGA 2 cut(s) 100, 141
TspRI CASTG 3 cut(s) 376, 973, 1328
XagI CCTNNNNNAGG 1 cut(s) 732
XapI RAATTY 1 cut(s) 1391
XbaI TCTAGA 1 cut(s) 1201
XceI RCATGY 1 cut(s) 862
XcmI CCANNNNNNNNNTGG 1 cut(s) 785
XhoI CTCGAG 1 cut(s) 729
XmnI GAANNNNTTC 1 cut(s) 510
XspI CTAG 2 cut(s) 515, 1202
ZraI GACGTC 1 cut(s) 1362
Zsp2I ATGCAT 2 cut(s) 864, 1078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.