Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003508

Physical Location & Seq

Genomic Coordinates Forward (+)

70618848 .. 70620935

Gene Structure 2088 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0582700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGCTTCCAATAATATGACTTTGATGACATTCTTCCTCATCATCTCCCTCGCTTTTTTCATCCTCCCTCAAACCCAAGCCAGAGTACTACTGTCCGAAACGCAAGCAACTCCGGCCACCGGCTTCCTCTTTCCGAAAGCTGAGTCCACAGTTCTCCCTGACCCTTCACCATTCTTTGCCCCAAGCCTCCTCCAAACCCCACTCCCCACAAACTCTTTCTTCCAAAACTTTGTACTCAACAATGGCGACCAGCCCGAATATTTCCACCCCTACCATTTCAGATCCTCCAACTCCTCCCTCTCTCTCTCCTACCCGACTCGCCTTGCCACCTCCGCTTCCATATCCCAGAACTTCACCCCTGAACTCACCATCTCCGCCACCCAAAACAACCAAGAACGCCATGTAGTCTCTTCCTTCAGTGACCTCGGCGTCACTCTAGACTTCCCCTCCTCCAATCTCCGCTTCTTCCTCGTCAAGGGAAGCCCCTACTTGACATGCAATGTGTCTAATCCCACCGCGCTTTCCATCTCCACCGCTAGTTCAATCACTTCTTTGTTTCCAAACGCTCAACGCAACAAGTACACATTAAAGCTCGACAACAGTCAGACAATGCTGGTGTACTCGTCCTCTCCGATTGGTCTCACCATCAGCAACCCATCACTGATCACTTCCGACGCATTCACCGGGGTTATAAGGGTTGCATTGTTGCCGCCGGGCTCTCAAGATCTCGAGGCAGTTCTAGACCAGTTCAGTTCTTCTTACCCGGTTTCGGGCGAGGCAGTGTTCACAGGGCCGTTTACATTGGAGTATAGATGGGTGAAAGAAGGAAATGGAGATTTGCTTATGCTAGCTCATCCTCTCCATCAACAACTTCTGTCTGTTCAGGACAGTAATGCCACTGTTCTTGACTATCTCAAGTACAGAAGCATTGATGGTGATCTCCTAGGCATTGTGGGAAACTCTTGGGTGTTGAAAACACAGCCTATTCCAGTCTCTTGGCATTCGATTACAGGTGTCAAGGACTTAGTACAGGCATTACCTGAAATAAAAGCCGCTCTTTCTGGTGACGTTCAGGCTCTAATTTCGACACCAGTATCAACAACAGCTTCTTATGAATATGGAAAATTGATTGCCAAGGCGGCAAGGCTGGCTTTGATTGGTGAAGAGGTGGGTGTTAAAGATATTCCAGCCATTACAAAGTTTTTGAAGGATGCAATTGAGCCATGGTTGAGTGGGACTTTCAGTGGGAATGGTTTCTTGTATGAAGGTAAATGGGGTGGACTTGTAACGAAAAATGGAGCAGTTGATAAAGGTGCAGATTACGGGTTTGGAGTGTATAATGATCACCATTTCCATCTTGGCTACTTTCTCTATGCAATTTCAGTAGTTGCAAAGCTTGATGTGGATTGGGGGATGAAGTTTAAGGATCAAGCTTATGCTCTTGCTGGGGATTTCATGAACTTAAACAGGCAGCCAGATTCAAGTTACCCGCGGTTGAGGAACTTTGATCTCTACAATTTGCATTCATGGGCTGGAGGGTTAACTGTATTTGCAGATGGACGAAATCAAGAGAGCACAAGTGAGGCAGTGAATGCTTACTACTCGGCTGCATTGATGGGGTTAGCCTATAGAGACACTAATCTCACCGACACAGCATCATTGCTTGCAGCACTGGAGATTCAGGCAGCTCAAAAGTGGTGGCATGTGCACCAAGGAGATAACATCTATGAGGATGTCTTCGCAAGTCAGAATAAGATCACTGGAATTGTGTGGTCTAATAAGAGGGATACCGGTCTTTGGTTTGCTTCAGCAGAGTCGAAAGAAATCAGGCTTGGAATTCAGGTGCTGCCGATTTCCCCTATCACTGAGGTCTTGTTCTCCAATGCCAGCTATGTTAGGGAGGTTGTAGATTGGACAATACCAGCTCTGAATAGGGAGGGAGTTACGGATGCATGGAGAGGGTTTGCTTATGCCTTGGAAGGGACATACAACAAGGAAGAGGCTTTGCAGAAGGTTAAAAACTTGAAAGGTTTTGATGATGGGAACTCACTTTCGAATCTCTTATGGTGGATCCACAGCAGAGGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

695

Amino Acids

76.52

Weight (kDa)

5.44

Isoelectric Point (pI)

29.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_81	PF03639	64 - 332	7.2e-58	Glycosyl hydrolase family 81 N-terminal domain
Glyco_hydro81C	PF17652	345 - 690	2e-99	Glycosyl hydrolase family 81 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003508)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27190 AT5G40870
fragaria_vesca	FvH4_6g53220
malus_domestica	MD09G1012900.v1.1 MD17G1013500.v1.1
prunus_persica	Prupe.3G304300_v2.0.a1
pyrus_communis	pycom111g01070 pycom17g01080
rosa_chinensis	RchiOBHm_Chr2g0143031 RchiOBHm_Chr2g0143071 RchiOBHm_Chr2g0175311
rosa_laevigata	RLG00000020006 RLG00000022319
rosa_multiflora	Rmu_sc0003512.1_g000003
rosa_roxburghii	Rroxscaffold_2G00077440 Rroxscaffold_2G00102120 Rroxscaffold_2G00102150
rosa_rugosa	Rorug02G0377700 Rorug02G0582700
rosa_samantha	Rh2AG401300 Rh2AG430800 Rh2AG663000 Rh2AG663400 Rh2BG197300 Rh2BG439700 Rh2BG674200 Rh2BG674300 Rh2CG387500 Rh2CG416500 Rh2CG637300 Rh2DG450000 Rh5AG496000
rosa_wichuraiana	Rw2G035190 Rw2G035210 Rw2G054360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	692
AasI	GACNNNNNNGTC	1 cut(s)	428
AccBSI	CCGCTC	1 cut(s)	1055
AccII	CGCG	2 cut(s)	518, 1492
AclWI	GGATC	4 cut(s)	276, 1434, 2065, 2078
AcoI	YGGCCR	1 cut(s)	114
AcsI	RAATTY	1 cut(s)	1836
AcuI	CTGAAG	2 cut(s)	400, 1791
AcyI	GRCGYC	1 cut(s)	429
AfaI	GTAC	6 cut(s)	87, 234, 581, 620, 920, 1029
AfiI	CCNNNNNNNGG	6 cut(s)	119, 475, 769, 770, 1797, 1980
AgeI	ACCGGT	1 cut(s)	1790
AgsI	TTSAA	5 cut(s)	543, 973, 1207, 1482, 2026
AjuI	GAANNNNNNNTTGG	4 cut(s)	446, 478, 1815, 1847
AluBI	AGCT	9 cut(s)	140, 592, 851, 1106, 1396, 1433, 1688, 1890, 1925
AluI	AGCT	9 cut(s)	140, 592, 851, 1106, 1396, 1433, 1688, 1890, 1925
Alw21I	GWGCWC	2 cut(s)	1577, 1710
Alw26I	GTCTC	4 cut(s)	412, 644, 997, 1626
Alw44I	GTGCAC	1 cut(s)	1706
AlwI	GGATC	4 cut(s)	276, 1434, 2065, 2078
AlwNI	CAGNNNCTG	1 cut(s)	1846
Ama87I	CYCGRG	1 cut(s)	728
AoxI	GGCC	2 cut(s)	114, 791
ApaLI	GTGCAC	1 cut(s)	1706
ApeKI	GCWGC	5 cut(s)	1471, 1607, 1667, 1685, 1846
ApoI	RAATTY	1 cut(s)	1836
ArsI	GACNNNNNNTTYG	2 cut(s)	128, 160
AsiGI	ACCGGT	1 cut(s)	1790
Asp700I	GAANNNNTTC	1 cut(s)	1253
AspA2I	CCTAGG	1 cut(s)	943
AspLEI	GCGC	1 cut(s)	520
AspS9I	GGNCC	1 cut(s)	791
AsuC2I	CCSGG	3 cut(s)	685, 714, 764
AsuII	TTCGAA	1 cut(s)	2054
AsuNHI	GCTAGC	1 cut(s)	847
AvaI	CYCGRG	1 cut(s)	728
AvrII	CCTAGG	1 cut(s)	943
BaeGI	GKGCMC	1 cut(s)	1710
BaeI	ACNNNNGTAYC	2 cut(s)	1077, 1110
BamHI	GGATCC	1 cut(s)	2070
BanII	GRGCYC	1 cut(s)	719
BbsI	GAAGAC	1 cut(s)	1729
Bbv12I	GWGCWC	2 cut(s)	1577, 1710
BbvI	GCAGC	5 cut(s)	1483, 1594, 1679, 1697, 1833
BceAI	ACGGC	1 cut(s)	778
BciVI	GTATCC	1 cut(s)	1780
BclI	TGATCA	2 cut(s)	663, 1342
BcnI	CCSGG	3 cut(s)	685, 714, 764
BcoDI	GTCTC	4 cut(s)	412, 644, 997, 1626
BfaI	CTAG	6 cut(s)	437, 537, 740, 848, 944, 2086
BfmI	CTRYAG	1 cut(s)	1627
BfuI	GTATCC	1 cut(s)	1780
BglI	GCCNNNNNGGC	1 cut(s)	1139
BglII	AGATCT	1 cut(s)	724
BisI	GCNGC	8 cut(s)	710, 1053, 1140, 1472, 1608, 1668, 1686, 1847
BlnI	CCTAGG	1 cut(s)	943
BlsI	GCNGC	8 cut(s)	711, 1054, 1141, 1473, 1609, 1669, 1687, 1848
BmcAI	AGTACT	1 cut(s)	87
Bme1390I	CCNGG	3 cut(s)	685, 714, 764
BmeT110I	CYCGRG	1 cut(s)	728
BmgT120I	GGNCC	1 cut(s)	791
BmiI	GGNNCC	1 cut(s)	2072
BmrFI	CCNGG	3 cut(s)	685, 714, 764
BmsI	GCATC	3 cut(s)	1201, 1664, 1939
BmtI	GCTAGC	1 cut(s)	851
BoxI	GACNNNNGTC	1 cut(s)	600
BpiI	GAAGAC	1 cut(s)	1729
BpmI	CTGGAG	2 cut(s)	1554, 1694
Bpu14I	TTCGAA	1 cut(s)	2054
BpuEI	CTTGAG	2 cut(s)	705, 899
BpuMI	CCSGG	3 cut(s)	685, 714, 764
BsaBI	GATNNNNATC	1 cut(s)	936
BsaHI	GRCGYC	1 cut(s)	429
BsaI	GGTCTC	1 cut(s)	644
BsaJI	CCNNGG	8 cut(s)	424, 684, 943, 1134, 1223, 1490, 1711, 1974
BsaWI	WCCGGW	1 cut(s)	1790
BsaXI	ACNNNNNCTCC	2 cut(s)	431, 461
Bsc4I	CCNNNNNNNGG	6 cut(s)	119, 475, 769, 770, 1797, 1980
Bse118I	RCCGGY	2 cut(s)	119, 1790
Bse1I	ACTGG	5 cut(s)	745, 989, 1091, 1677, 1765
Bse3DI	GCAATG	2 cut(s)	505, 1658
Bse8I	GATNNNNATC	1 cut(s)	936
BseDI	CCNNGG	8 cut(s)	424, 684, 943, 1134, 1223, 1490, 1711, 1974
BseGI	GGATG	6 cut(s)	60, 853, 1216, 1419, 1738, 1954
BseJI	GATNNNNATC	1 cut(s)	936
BseLI	CCNNNNNNNGG	6 cut(s)	119, 475, 769, 770, 1797, 1980
BseMI	GCAATG	2 cut(s)	505, 1658
BseMII	CTCAG	2 cut(s)	132, 1857
BseNI	ACTGG	5 cut(s)	745, 989, 1091, 1677, 1765
BseRI	GAGGAG	3 cut(s)	179, 283, 439
BseSI	GKGCMC	1 cut(s)	1710
BseXI	GCAGC	5 cut(s)	1483, 1594, 1679, 1697, 1833
BseYI	CCCAGC	1 cut(s)	1445
BsgI	GTGCAG	1 cut(s)	1335
Bsh1236I	CGCG	2 cut(s)	518, 1492
BshFI	GGCC	2 cut(s)	116, 793
BshTI	ACCGGT	1 cut(s)	1790
BsiHKAI	GWGCWC	2 cut(s)	1577, 1710
BsiHKCI	CYCGRG	1 cut(s)	728
BsiSI	CCGG	6 cut(s)	113, 120, 684, 713, 764, 1791
BslFI	GGGAC	2 cut(s)	1249, 1996
BslI	CCNNNNNNNGG	6 cut(s)	119, 475, 769, 770, 1797, 1980
BsmAI	GTCTC	4 cut(s)	412, 644, 997, 1626
BsmFI	GGGAC	2 cut(s)	1249, 1996
BsmI	GAATGC	4 cut(s)	677, 1000, 1522, 1597
BsnI	GGCC	2 cut(s)	116, 793
Bso31I	GGTCTC	1 cut(s)	644
BsoBI	CYCGRG	1 cut(s)	728
Bsp119I	TTCGAA	1 cut(s)	2054
Bsp1286I	GDGCHC	3 cut(s)	719, 1577, 1710
Bsp143I	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
Bsp19I	CCATGG	1 cut(s)	1223
BspANI	GGCC	2 cut(s)	116, 793
BspCNI	CTCAG	2 cut(s)	133, 1858
BspFNI	CGCG	2 cut(s)	518, 1492
BspHI	TCATGA	1 cut(s)	1455
BspLI	GGNNCC	1 cut(s)	2072
BspOI	GCTAGC	1 cut(s)	851
BspPI	GGATC	4 cut(s)	276, 1434, 2065, 2078
BspT104I	TTCGAA	1 cut(s)	2054
BspTNI	GGTCTC	1 cut(s)	644
BsrBI	CCGCTC	1 cut(s)	1055
BsrDI	GCAATG	2 cut(s)	505, 1658
BsrFI	RCCGGY	2 cut(s)	119, 1790
BsrI	ACTGG	5 cut(s)	745, 989, 1091, 1677, 1765
BssAI	RCCGGY	2 cut(s)	119, 1790
BssECI	CCNNGG	8 cut(s)	424, 684, 943, 1134, 1223, 1490, 1711, 1974
BssMI	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
BssNI	GRCGYC	1 cut(s)	429
BssT1I	CCWWGG	5 cut(s)	943, 1134, 1223, 1711, 1974
Bst4CI	ACNGT	6 cut(s)	93, 151, 602, 890, 901, 1546
Bst6I	CTCTTC	3 cut(s)	415, 1158, 1992
BstACI	GRCGYC	1 cut(s)	429
BstAPI	GCANNNNNTGC	1 cut(s)	1592
BstBI	TTCGAA	1 cut(s)	2054
BstC8I	GCNNGC	5 cut(s)	105, 849, 1149, 1665, 1888
BstDEI	CTNAG	3 cut(s)	141, 1024, 1866
BstDSI	CCRYGG	2 cut(s)	1223, 1490
BstENI	CCTNNNNNAGG	1 cut(s)	473
BstF5I	GGATG	6 cut(s)	60, 853, 1216, 1419, 1738, 1954
BstFNI	CGCG	2 cut(s)	518, 1492
BstHHI	GCGC	1 cut(s)	520
BstKTI	GATC	9 cut(s)	284, 666, 727, 940, 1345, 1429, 1510, 1758, 2073
BstMAI	GTCTC	4 cut(s)	412, 644, 997, 1626
BstMBI	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
BstMWI	GCNNNNNNNGC	5 cut(s)	113, 332, 1139, 1148, 1592
BstNSI	RCATGY	2 cut(s)	498, 1706
BstPAI	GACNNNNGTC	1 cut(s)	600
BstSCI	CCNGG	3 cut(s)	683, 712, 762
BstSFI	CTRYAG	1 cut(s)	1627
BstSLI	GKGCMC	1 cut(s)	1710
BstUI	CGCG	2 cut(s)	518, 1492
BstV1I	GCAGC	5 cut(s)	1483, 1594, 1679, 1697, 1833
BstV2I	GAAGAC	1 cut(s)	1729
BstX2I	RGATCY	3 cut(s)	281, 724, 2070
BstXI	CCANNNNNNTGG	1 cut(s)	996
BstYI	RGATCY	3 cut(s)	281, 724, 2070
BsuI	GTATCC	1 cut(s)	1780
BsuRI	GGCC	2 cut(s)	116, 793
BtgI	CCRYGG	2 cut(s)	1223, 1490
BtsCI	GGATG	6 cut(s)	60, 853, 1216, 1419, 1738, 1954
BtsI	GCAGTG	2 cut(s)	786, 1593
BtsIMutI	CAGTG	9 cut(s)	424, 659, 786, 897, 1249, 1593, 1670, 1758, 1863
Cac8I	GCNNGC	5 cut(s)	105, 849, 1149, 1665, 1888
CaiI	CAGNNNCTG	1 cut(s)	1846
CciI	TCATGA	1 cut(s)	1455
CfoI	GCGC	1 cut(s)	520
Cfr10I	RCCGGY	2 cut(s)	119, 1790
Cfr13I	GGNCC	1 cut(s)	791
Cfr42I	CCGCGG	1 cut(s)	1493
CseI	GACGC	2 cut(s)	418, 683
Csp6I	GTAC	6 cut(s)	86, 233, 580, 619, 919, 1028
CspAI	ACCGGT	1 cut(s)	1790
CspCI	CAANNNNNGTGG	4 cut(s)	886, 921, 1679, 1714
CviAII	CATG	7 cut(s)	401, 495, 1224, 1456, 1527, 1703, 1953
CviQI	GTAC	6 cut(s)	86, 233, 580, 619, 919, 1028
DdeI	CTNAG	3 cut(s)	141, 1024, 1866
DpnI	GATC	9 cut(s)	283, 665, 726, 939, 1344, 1428, 1509, 1757, 2072
DpnII	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
DrdI	GACNNNNNNGTC	1 cut(s)	428
DseDI	GACNNNNNNGTC	1 cut(s)	428
EaeI	YGGCCR	1 cut(s)	114
Eam1104I	CTCTTC	3 cut(s)	415, 1158, 1992
EarI	CTCTTC	3 cut(s)	415, 1158, 1992
EciI	GGCGGA	1 cut(s)	364
Eco130I	CCWWGG	5 cut(s)	943, 1134, 1223, 1711, 1974
Eco24I	GRGCYC	1 cut(s)	719
Eco31I	GGTCTC	1 cut(s)	644
Eco57I	CTGAAG	2 cut(s)	400, 1791
Eco88I	CYCGRG	1 cut(s)	728
EcoNI	CCTNNNNNAGG	1 cut(s)	473
EcoRI	GAATTC	1 cut(s)	1836
EcoT14I	CCWWGG	5 cut(s)	943, 1134, 1223, 1711, 1974
EcoT22I	ATGCAT	1 cut(s)	1954
EcoT38I	GRGCYC	1 cut(s)	719
ErhI	CCWWGG	5 cut(s)	943, 1134, 1223, 1711, 1974
FaeI	CATG	7 cut(s)	404, 498, 1227, 1459, 1530, 1706, 1956
FalI	AAGNNNNNCTT	4 cut(s)	1041, 1073, 1135, 1167
FaqI	GGGAC	2 cut(s)	1249, 1996
FatI	CATG	7 cut(s)	400, 494, 1223, 1455, 1526, 1702, 1952
FauI	CCCGC	1 cut(s)	1497
FbaI	TGATCA	2 cut(s)	663, 1342
Fnu4HI	GCNGC	8 cut(s)	710, 1053, 1140, 1472, 1608, 1668, 1686, 1847
FokI	GGATG	6 cut(s)	47, 840, 1223, 1426, 1745, 1961
FriOI	GRGCYC	1 cut(s)	719
Fsp4HI	GCNGC	8 cut(s)	710, 1053, 1140, 1472, 1608, 1668, 1686, 1847
FspBI	CTAG	6 cut(s)	437, 537, 740, 848, 944, 2086
GlaI	GCGC	1 cut(s)	519
GluI	GCNGC	8 cut(s)	710, 1053, 1140, 1472, 1608, 1668, 1686, 1847
GsaI	CCCAGC	1 cut(s)	1449
GsuI	CTGGAG	2 cut(s)	1554, 1694
HaeIII	GGCC	2 cut(s)	116, 793
HapII	CCGG	6 cut(s)	113, 120, 684, 713, 764, 1791
HgaI	GACGC	2 cut(s)	418, 683
HhaI	GCGC	1 cut(s)	520
Hin1I	GRCGYC	1 cut(s)	429
Hin1II	CATG	7 cut(s)	404, 498, 1227, 1459, 1530, 1706, 1956
Hin6I	GCGC	1 cut(s)	518
HinP1I	GCGC	1 cut(s)	518
HincII	GTYRAC	1 cut(s)	1542
HindII	GTYRAC	1 cut(s)	1542
HindIII	AAGCTT	2 cut(s)	1394, 1431
HinfI	GANTC	6 cut(s)	143, 316, 1478, 1678, 1814, 2056
HpaI	GTTAAC	1 cut(s)	1542
HpaII	CCGG	6 cut(s)	113, 120, 684, 713, 764, 1791
Hpy166II	GTNNAC	8 cut(s)	147, 582, 619, 786, 798, 1280, 1542, 1708
Hpy188I	TCNGA	8 cut(s)	97, 135, 281, 606, 633, 673, 1749, 1929
Hpy188III	TCNNGA	8 cut(s)	437, 722, 728, 740, 884, 905, 1456, 1568
Hpy8I	GTNNAC	8 cut(s)	147, 582, 619, 786, 798, 1280, 1542, 1708
Hpy99I	CGWCG	1 cut(s)	677
HpyAV	CCTTC	7 cut(s)	174, 424, 818, 1201, 1259, 1973, 2005
HpyCH4III	ACNGT	6 cut(s)	93, 151, 602, 890, 901, 1546
HpyCH4IV	ACGT	1 cut(s)	1068
HpyF10VI	GCNNNNNNNGC	5 cut(s)	113, 332, 1139, 1148, 1592
HpyF3I	CTNAG	3 cut(s)	141, 1024, 1866
HpySE526I	ACGT	1 cut(s)	1068
Hsp92I	GRCGYC	1 cut(s)	429
Hsp92II	CATG	7 cut(s)	404, 498, 1227, 1459, 1530, 1706, 1956
HspAI	GCGC	1 cut(s)	518
Ksp22I	TGATCA	2 cut(s)	663, 1342
KspAI	GTTAAC	1 cut(s)	1542
KspI	CCGCGG	1 cut(s)	1493
Kzo9I	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
LmnI	GCTCC	1 cut(s)	1298
Lsp1109I	GCAGC	5 cut(s)	1483, 1594, 1679, 1697, 1833
LweI	GCATC	3 cut(s)	1201, 1664, 1939
MaeI	CTAG	6 cut(s)	437, 537, 740, 848, 944, 2086
MaeII	ACGT	1 cut(s)	1068
MaeIII	GTNAC	6 cut(s)	419, 430, 1064, 1285, 1484, 1942
MalI	GATC	9 cut(s)	283, 665, 726, 939, 1344, 1428, 1509, 1757, 2072
MbiI	CCGCTC	1 cut(s)	1055
MboI	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
MboII	GAAGA	8 cut(s)	25, 211, 402, 457, 747, 1175, 1729, 2009
MfeI	CAATTG	1 cut(s)	1215
MflI	RGATCY	3 cut(s)	281, 724, 2070
MhlI	GDGCHC	3 cut(s)	719, 1577, 1710
MluCI	AATT	7 cut(s)	1080, 1124, 1215, 1377, 1516, 1764, 1836
MlyI	GAGTC	3 cut(s)	152, 310, 1823
MmeI	TCCRAC	2 cut(s)	312, 696
Mph1103I	ATGCAT	1 cut(s)	1954
MroXI	GAANNNNTTC	1 cut(s)	1253
MseI	TTAA	6 cut(s)	587, 1176, 1422, 1463, 1541, 2016
MspA1I	CMGCKG	1 cut(s)	1492
MspI	CCGG	6 cut(s)	113, 120, 684, 713, 764, 1791
MspR9I	CCNGG	3 cut(s)	685, 714, 764
MunI	CAATTG	1 cut(s)	1215
Mva1269I	GAATGC	4 cut(s)	677, 1000, 1522, 1597
MvnI	CGCG	2 cut(s)	518, 1492
MwoI	GCNNNNNNNGC	5 cut(s)	113, 332, 1139, 1148, 1592
NciI	CCSGG	3 cut(s)	685, 714, 764
NcoI	CCATGG	1 cut(s)	1223
NdeII	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
NheI	GCTAGC	1 cut(s)	847
NlaIII	CATG	7 cut(s)	404, 498, 1227, 1459, 1530, 1706, 1956
NlaIV	GGNNCC	1 cut(s)	2072
NmeAIII	GCCGAG	2 cut(s)	405, 1583
NmuCI	GTSAC	3 cut(s)	419, 430, 1064
NsiI	ATGCAT	1 cut(s)	1954
NspI	RCATGY	2 cut(s)	498, 1706
NspV	TTCGAA	1 cut(s)	2054
PaeR7I	CTCGAG	1 cut(s)	728
PagI	TCATGA	1 cut(s)	1455
PcsI	WCGNNNNNNNCGW	1 cut(s)	629
PctI	GAATGC	4 cut(s)	677, 1000, 1522, 1597
PdmI	GAANNNNTTC	1 cut(s)	1253
PfeI	GAWTC	3 cut(s)	1478, 1678, 2056
PinAI	ACCGGT	1 cut(s)	1790
PkrI	GCNGC	8 cut(s)	711, 1054, 1141, 1473, 1609, 1669, 1687, 1848
PleI	GAGTC	3 cut(s)	151, 310, 1822
PpsI	GAGTC	3 cut(s)	151, 310, 1822
PshAI	GACNNNNGTC	1 cut(s)	600
PsiI	TTATAA	1 cut(s)	692
PspFI	CCCAGC	1 cut(s)	1445
PspN4I	GGNNCC	1 cut(s)	2072
PspPI	GGNCC	1 cut(s)	791
PstNI	CAGNNNCTG	1 cut(s)	1846
PsuI	RGATCY	3 cut(s)	281, 724, 2070
RsaI	GTAC	6 cut(s)	87, 234, 581, 620, 920, 1029
RsaNI	GTAC	6 cut(s)	86, 233, 580, 619, 919, 1028
SacII	CCGCGG	1 cut(s)	1493
SaqAI	TTAA	6 cut(s)	587, 1176, 1422, 1463, 1541, 2016
SatI	GCNGC	8 cut(s)	710, 1053, 1140, 1472, 1608, 1668, 1686, 1847
Sau3AI	GATC	9 cut(s)	281, 663, 724, 937, 1342, 1426, 1507, 1755, 2070
Sau96I	GGNCC	1 cut(s)	791
ScaI	AGTACT	1 cut(s)	87
SchI	GAGTC	3 cut(s)	152, 310, 1823
ScrFI	CCNGG	3 cut(s)	685, 714, 764
SduI	GDGCHC	3 cut(s)	719, 1577, 1710
SfaNI	GCATC	3 cut(s)	1201, 1664, 1939
SfcI	CTRYAG	1 cut(s)	1627
Sfr274I	CTCGAG	1 cut(s)	728
Sfr303I	CCGCGG	1 cut(s)	1493
SfuI	TTCGAA	1 cut(s)	2054
SgrBI	CCGCGG	1 cut(s)	1493
SlaI	CTCGAG	1 cut(s)	728
SmlI	CTYRAG	3 cut(s)	720, 728, 914
SmoI	CTYRAG	3 cut(s)	720, 728, 914
Sse9I	AATT	7 cut(s)	1080, 1124, 1215, 1377, 1516, 1764, 1836
SspI	AATATT	1 cut(s)	260
SspMI	CTAG	6 cut(s)	437, 537, 740, 848, 944, 2086
StyD4I	CCNGG	3 cut(s)	683, 712, 762
StyI	CCWWGG	5 cut(s)	943, 1134, 1223, 1711, 1974
TaaI	ACNGT	6 cut(s)	93, 151, 602, 890, 901, 1546
TaiI	ACGT	1 cut(s)	1071
TaqI	TCGA	6 cut(s)	594, 729, 1004, 1085, 1817, 2054
TasI	AATT	7 cut(s)	1080, 1124, 1215, 1377, 1516, 1764, 1836
TatI	WGTACW	6 cut(s)	85, 232, 579, 618, 918, 1027
TauI	GCSGC	3 cut(s)	712, 1055, 1142
TfiI	GAWTC	3 cut(s)	1478, 1678, 2056
Tru1I	TTAA	6 cut(s)	587, 1176, 1422, 1463, 1541, 2016
Tru9I	TTAA	6 cut(s)	587, 1176, 1422, 1463, 1541, 2016
TscAI	CASTG	9 cut(s)	424, 666, 786, 904, 1249, 1593, 1677, 1765, 1870
TseFI	GTSAC	3 cut(s)	419, 430, 1064
TseI	GCWGC	5 cut(s)	1471, 1607, 1667, 1685, 1846
Tsp45I	GTSAC	3 cut(s)	419, 430, 1064
TspDTI	ATGAA	7 cut(s)	49, 1128, 1278, 1430, 1444, 1472, 1515
TspGWI	ACGGA	1 cut(s)	1961
TspRI	CASTG	9 cut(s)	424, 666, 786, 904, 1249, 1593, 1677, 1765, 1870
VneI	GTGCAC	1 cut(s)	1706
XagI	CCTNNNNNAGG	1 cut(s)	473
XapI	RAATTY	1 cut(s)	1836
XbaI	TCTAGA	2 cut(s)	436, 739
XceI	RCATGY	2 cut(s)	498, 1706
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1355
XhoI	CTCGAG	1 cut(s)	728
XmaJI	CCTAGG	1 cut(s)	943
XmnI	GAANNNNTTC	1 cut(s)	1253
XspI	CTAG	6 cut(s)	437, 537, 740, 848, 944, 2086
ZrmI	AGTACT	1 cut(s)	87
Zsp2I	ATGCAT	1 cut(s)	1954

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.