Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0003508

Physical Location & Seq

Genomic Coordinates Reverse (-)

973919 .. 978905

Gene Structure 4987 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00077440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGCGGAGGAGACGAAGACCACCGTTGACTACCGGATGGAGAGAGCGTCTGGTCCCCACTTCTCGGGCCTCCGACTCGACGGCCTCTTATCTTCTTCGCCCAATTCTTCTCCTTCTTCTTCAGCTTCGCCACTTTCTCTTCGCTCTTCTGCCGCCGATTCTTCAAACCTCGCCGACTCCATCGCCGCCAAGCATCCCTTCGTCATCGGTGTTTCTGGAGGTACGGCTTCCGGTAAGACCACGGTGTGCGACATGATCATCCAGCAGCTTCATGATCATCGCGTCGTCCTTGTCAATCAGGATTCATTTTATCGTGGTTTGACACCTGAGGAGTCTGAACGGGTGCATGAGTATAATTTTGATCATCCTGACGCGTTTGATACCGAGCAGATGTTAGAGTGTGTTCAAAAGCTAAAAAGCGGGCAGTCTGTCCAAGTTCCAATATATGATTTTAAGATACATCGGCGCAGTTCTGATAGTTTTCGACAGGTGAATGCTTCTGATGTAATAATCTTGGAGGGAATTCTGGTTTTCCATGACCAGCGTGTCCGTAATCTGATGAACATGAAGATTTTTGTCGATACAGATGCTGATGTGAGACTTGCTCGTAGATTAAGACGAGACACTGTTGAGAGGGGCAGGGACGTAGACTCTGTTCTTGAGCAGTATGCCAAGTTTGTCAAGCCTGCTTTTGATGATTTTGTTCTCCCCTCAAAGAAGTACGCTGATTCCACGTTTCAGATTAGAGGCATGCATACACTGATTCGAGACCGAGAAATATCAAAGCATGATTTTGTATTTTATTCAGATCGCCTAATTCGTCTGGTTGTGGAGCATGGCCTTGGTCATTTGCCATTCACAGAGAAACAAGTAATAACTCCACCAGGTGTGCCCATTATGTTCCGCCACCCTCTTCTTATTGCTTGTATTTATGTGCATCTCTATGAATCACAGGATCTGTGTATACTGGGGGTTGATTTCTGCAAGAAATTATGTGGAGTTTCAATTGTTCGAAGAATTGTGATGAATCCAATTCTATTCCAGCACTTTTCTAGTGGTGAGAGCATGGAAAATGCATTACGTGCATGTTGCAAAGGAATAAAAATTGGGAAGATCTTGATTCATCGTGATGGAGACGATGGCAAACAGCTTATATATGAGAAGCTCCCGAAGGATATTTCAGAGCGTCATGTCCTGCTGCTAGACCCTGTACTTGCTACAGGTAATTCTGCTAACCAGGCTATTGAACTACTCATACAGAAGGGGGCTCCTGAGGGAATTCATTGTGTTTACAAACGATTTCCATCCTTGAAGATCGTCACTTCAGAGATTGATGTTGCCCTCAATGAAGAATTTCGTGTCATACCAGGGTTGGGTGAATTTGGGGATCGTTACTTCGGCACAGATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

470

Amino Acids

52.89

Weight (kDa)

6.32

Isoelectric Point (pI)

44.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	68 - 248	1.2e-47	Phosphoribulokinase / Uridine kinase family
UPRTase	PF14681	244 - 297	1.5e-10	Uracil phosphoribosyltransferase
UPRTase	PF14681	333 - 468	1.6e-37	Uracil phosphoribosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003508)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27190 AT5G40870
fragaria_vesca	FvH4_6g53220
malus_domestica	MD09G1012900.v1.1 MD17G1013500.v1.1
prunus_persica	Prupe.3G304300_v2.0.a1
pyrus_communis	pycom111g01070 pycom17g01080
rosa_chinensis	RchiOBHm_Chr2g0143031 RchiOBHm_Chr2g0143071 RchiOBHm_Chr2g0175311
rosa_laevigata	RLG00000020006 RLG00000022319
rosa_multiflora	Rmu_sc0003512.1_g000003
rosa_roxburghii	Rroxscaffold_2G00077440 Rroxscaffold_2G00102120 Rroxscaffold_2G00102150
rosa_rugosa	Rorug02G0377700 Rorug02G0582700
rosa_samantha	Rh2AG401300 Rh2AG430800 Rh2AG663000 Rh2AG663400 Rh2BG197300 Rh2BG439700 Rh2BG674200 Rh2BG674300 Rh2CG387500 Rh2CG416500 Rh2CG637300 Rh2DG450000 Rh5AG496000
rosa_wichuraiana	Rw2G035190 Rw2G035210 Rw2G054360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	545
AccI	GTMKAC	2 cut(s)	648, 964
AccII	CGCG	2 cut(s)	282, 374
AciI	CCGC	5 cut(s)	5, 153, 186, 420, 904
AclWI	GGATC	2 cut(s)	963, 1395
AcsI	RAATTY	4 cut(s)	522, 1278, 1352, 1379
AcuI	CTGAAG	2 cut(s)	105, 1308
AdeI	CACNNNGTG	2 cut(s)	246, 887
AfaI	GTAC	3 cut(s)	223, 722, 1212
AfiI	CCNNNNNNNGG	2 cut(s)	64, 1373
AflIII	ACRYGT	1 cut(s)	372
AgsI	TTSAA	5 cut(s)	165, 407, 1005, 1247, 1312
AjnI	CCWGG	3 cut(s)	883, 1236, 1366
AjuI	GAANNNNNNNTTGG	2 cut(s)	182, 214
AluBI	AGCT	5 cut(s)	125, 268, 412, 1150, 1165
AluI	AGCT	5 cut(s)	125, 268, 412, 1150, 1165
Alw26I	GTCTC	5 cut(s)	5, 592, 615, 762, 1128
AlwI	GGATC	2 cut(s)	963, 1395
AlwNI	CAGNNNCTG	2 cut(s)	590, 958
Ama87I	CYCGRG	1 cut(s)	64
AoxI	GGCC	3 cut(s)	67, 82, 838
ApeKI	GCWGC	2 cut(s)	265, 1198
ApoI	RAATTY	4 cut(s)	522, 1278, 1352, 1379
Asp700I	GAANNNNTTC	1 cut(s)	1353
AspLEI	GCGC	1 cut(s)	468
AspS9I	GGNCC	2 cut(s)	53, 67
AsuHPI	GGTGA	3 cut(s)	502, 1070, 1388
AsuII	TTCGAA	1 cut(s)	1012
AvaI	CYCGRG	1 cut(s)	64
AvaII	GGWCC	1 cut(s)	53
AxyI	CCTNAGG	2 cut(s)	327, 1272
BaeGI	GKGCMC	1 cut(s)	894
BanII	GRGCYC	1 cut(s)	1270
BbsI	GAAGAC	1 cut(s)	23
BbvI	GCAGC	2 cut(s)	277, 1185
BccI	CCATC	5 cut(s)	31, 188, 1124, 1133, 1312
BceAI	ACGGC	2 cut(s)	97, 240
BcgI	CGANNNNNNTGC	2 cut(s)	569, 603
BciT130I	CCWGG	3 cut(s)	885, 1238, 1368
BclI	TGATCA	3 cut(s)	255, 274, 361
BcoDI	GTCTC	5 cut(s)	5, 592, 615, 762, 1128
BfaI	CTAG	2 cut(s)	1053, 1202
BfmI	CTRYAG	1 cut(s)	1218
BglII	AGATCT	1 cut(s)	1113
BisI	GCNGC	4 cut(s)	153, 186, 266, 1199
BlsI	GCNGC	4 cut(s)	154, 187, 267, 1200
Bme1390I	CCNGG	3 cut(s)	885, 1238, 1368
Bme18I	GGWCC	1 cut(s)	53
BmeT110I	CYCGRG	1 cut(s)	64
BmgT120I	GGNCC	2 cut(s)	53, 67
BmiI	GGNNCC	2 cut(s)	55, 1269
BmrFI	CCNGG	3 cut(s)	885, 1238, 1368
BmrI	ACTGGG	1 cut(s)	977
BmsI	GCATC	3 cut(s)	202, 577, 946
BmuI	ACTGGG	1 cut(s)	977
BpiI	GAAGAC	1 cut(s)	23
BplI	GAGNNNNNCTC	2 cut(s)	589, 621
BpmI	CTGGAG	1 cut(s)	237
Bpu14I	TTCGAA	1 cut(s)	1012
BpuEI	CTTGAG	1 cut(s)	680
BsaAI	YACGTR	1 cut(s)	1082
BsaBI	GATNNNNATC	1 cut(s)	1303
BsaI	GGTCTC	1 cut(s)	762
BsaJI	CCNNGG	3 cut(s)	240, 841, 1367
BsaWI	WCCGGW	2 cut(s)	33, 230
BsaXI	ACNNNNNCTCC	2 cut(s)	32, 62
Bsc4I	CCNNNNNNNGG	2 cut(s)	64, 1373
Bse1I	ACTGG	1 cut(s)	972
Bse21I	CCTNAGG	2 cut(s)	327, 1272
Bse8I	GATNNNNATC	1 cut(s)	1303
BseBI	CCWGG	3 cut(s)	885, 1238, 1368
BseDI	CCNNGG	3 cut(s)	240, 841, 1367
BseGI	GGATG	5 cut(s)	42, 193, 258, 364, 1304
BseJI	GATNNNNATC	1 cut(s)	1303
BseLI	CCNNNNNNNGG	2 cut(s)	64, 1373
BseMII	CTCAG	2 cut(s)	318, 1263
BseNI	ACTGG	1 cut(s)	972
BseRI	GAGGAG	2 cut(s)	23, 344
BseSI	GKGCMC	1 cut(s)	894
BseXI	GCAGC	2 cut(s)	277, 1185
Bsh1236I	CGCG	2 cut(s)	282, 374
BshFI	GGCC	3 cut(s)	69, 84, 840
BsiHKCI	CYCGRG	1 cut(s)	64
BsiSI	CCGG	2 cut(s)	34, 231
BslFI	GGGAC	2 cut(s)	39, 656
BslI	CCNNNNNNNGG	2 cut(s)	64, 1373
BsmAI	GTCTC	5 cut(s)	5, 592, 615, 762, 1128
BsmBI	CGTCTC	2 cut(s)	5, 1128
BsmFI	GGGAC	2 cut(s)	39, 656
BsmI	GAATGC	1 cut(s)	499
BsnI	GGCC	3 cut(s)	69, 84, 840
Bso31I	GGTCTC	1 cut(s)	762
BsoBI	CYCGRG	1 cut(s)	64
Bsp119I	TTCGAA	1 cut(s)	1012
Bsp1286I	GDGCHC	2 cut(s)	894, 1270
Bsp143I	GATC	8 cut(s)	255, 274, 361, 808, 955, 1113, 1314, 1387
BspACI	CCGC	5 cut(s)	5, 153, 186, 420, 904
BspANI	GGCC	3 cut(s)	69, 84, 840
BspCNI	CTCAG	2 cut(s)	319, 1264
BspFNI	CGCG	2 cut(s)	282, 374
BspHI	TCATGA	1 cut(s)	271
BspLI	GGNNCC	2 cut(s)	55, 1269
BspPI	GGATC	2 cut(s)	963, 1395
BspQI	GCTCTTC	1 cut(s)	151
BspT104I	TTCGAA	1 cut(s)	1012
BspTNI	GGTCTC	1 cut(s)	762
BsrI	ACTGG	1 cut(s)	972
BssECI	CCNNGG	3 cut(s)	240, 841, 1367
BssMI	GATC	8 cut(s)	255, 274, 361, 808, 955, 1113, 1314, 1387
BssNAI	GTATAC	1 cut(s)	965
BssT1I	CCWWGG	1 cut(s)	841
Bst1107I	GTATAC	1 cut(s)	965
Bst2UI	CCWGG	3 cut(s)	885, 1238, 1368
Bst4CI	ACNGT	3 cut(s)	25, 244, 628
Bst6I	CTCTTC	3 cut(s)	144, 151, 918
BstAPI	GCANNNNNTGC	1 cut(s)	1082
BstBAI	YACGTR	1 cut(s)	1082
BstBI	TTCGAA	1 cut(s)	1012
BstC8I	GCNNGC	3 cut(s)	422, 687, 752
BstDEI	CTNAG	2 cut(s)	327, 1272
BstDSI	CCRYGG	1 cut(s)	240
BstF5I	GGATG	5 cut(s)	42, 193, 258, 364, 1304
BstFNI	CGCG	2 cut(s)	282, 374
BstHHI	GCGC	1 cut(s)	468
BstKTI	GATC	8 cut(s)	258, 277, 364, 811, 958, 1116, 1317, 1390
BstMAI	GTCTC	5 cut(s)	5, 592, 615, 762, 1128
BstMBI	GATC	8 cut(s)	255, 274, 361, 808, 955, 1113, 1314, 1387
BstMWI	GCNNNNNNNGC	2 cut(s)	1082, 1238
BstNI	CCWGG	3 cut(s)	885, 1238, 1368
BstNSI	RCATGY	2 cut(s)	754, 1089
BstSCI	CCNGG	3 cut(s)	883, 1236, 1366
BstSFI	CTRYAG	1 cut(s)	1218
BstSLI	GKGCMC	1 cut(s)	894
BstUI	CGCG	2 cut(s)	282, 374
BstV1I	GCAGC	2 cut(s)	277, 1185
BstV2I	GAAGAC	1 cut(s)	23
BstX2I	RGATCY	2 cut(s)	955, 1113
BstYI	RGATCY	2 cut(s)	955, 1113
BstZ17I	GTATAC	1 cut(s)	965
Bsu36I	CCTNAGG	2 cut(s)	327, 1272
BsuRI	GGCC	3 cut(s)	69, 84, 840
BtgI	CCRYGG	1 cut(s)	240
BtgZI	GCGATG	2 cut(s)	166, 263
BtsCI	GGATG	5 cut(s)	42, 193, 258, 364, 1304
BtsIMutI	CAGTG	2 cut(s)	624, 758
Cac8I	GCNNGC	3 cut(s)	422, 687, 752
CaiI	CAGNNNCTG	2 cut(s)	590, 958
CciI	TCATGA	1 cut(s)	271
CfoI	GCGC	1 cut(s)	468
Cfr13I	GGNCC	2 cut(s)	53, 67
CseI	GACGC	4 cut(s)	36, 271, 380, 1175
CsiI	ACCWGGT	1 cut(s)	883
Csp6I	GTAC	3 cut(s)	222, 721, 1211
CviQI	GTAC	3 cut(s)	222, 721, 1211
DdeI	CTNAG	2 cut(s)	327, 1272
DpnI	GATC	8 cut(s)	257, 276, 363, 810, 957, 1115, 1316, 1389
DpnII	GATC	8 cut(s)	255, 274, 361, 808, 955, 1113, 1314, 1387
DraIII	CACNNNGTG	2 cut(s)	246, 887
DrdI	GACNNNNNNGTC	1 cut(s)	545
DseDI	GACNNNNNNGTC	1 cut(s)	545
Eam1104I	CTCTTC	3 cut(s)	144, 151, 918
EarI	CTCTTC	3 cut(s)	144, 151, 918
EciI	GGCGGA	2 cut(s)	20, 893
Eco130I	CCWWGG	1 cut(s)	841
Eco24I	GRGCYC	1 cut(s)	1270
Eco31I	GGTCTC	1 cut(s)	762
Eco47I	GGWCC	1 cut(s)	53
Eco57I	CTGAAG	2 cut(s)	105, 1308
Eco81I	CCTNAGG	2 cut(s)	327, 1272
Eco88I	CYCGRG	1 cut(s)	64
EcoRI	GAATTC	2 cut(s)	522, 1278
EcoRII	CCWGG	3 cut(s)	883, 1236, 1366
EcoT14I	CCWWGG	1 cut(s)	841
EcoT22I	ATGCAT	2 cut(s)	756, 1078
EcoT38I	GRGCYC	1 cut(s)	1270
ErhI	CCWWGG	1 cut(s)	841
Esp3I	CGTCTC	2 cut(s)	5, 1128
FalI	AAGNNNNNCTT	2 cut(s)	182, 214
FaqI	GGGAC	2 cut(s)	39, 656
FauI	CCCGC	1 cut(s)	413
FbaI	TGATCA	3 cut(s)	255, 274, 361
FblI	GTMKAC	2 cut(s)	648, 964
Fnu4HI	GCNGC	4 cut(s)	153, 186, 266, 1199
FokI	GGATG	5 cut(s)	49, 180, 245, 351, 1291
FriOI	GRGCYC	1 cut(s)	1270
Fsp4HI	GCNGC	4 cut(s)	153, 186, 266, 1199
FspBI	CTAG	2 cut(s)	1053, 1202
GlaI	GCGC	1 cut(s)	467
GluI	GCNGC	4 cut(s)	153, 186, 266, 1199
GsuI	CTGGAG	1 cut(s)	237
HaeIII	GGCC	3 cut(s)	69, 84, 840
HapII	CCGG	2 cut(s)	34, 231
HgaI	GACGC	4 cut(s)	36, 271, 380, 1175
HhaI	GCGC	1 cut(s)	468
Hin6I	GCGC	1 cut(s)	466
HinP1I	GCGC	1 cut(s)	466
HincII	GTYRAC	1 cut(s)	28
HindII	GTYRAC	1 cut(s)	28
HpaII	CCGG	2 cut(s)	34, 231
HphI	GGTGA	3 cut(s)	502, 1070, 1388
Hpy166II	GTNNAC	4 cut(s)	28, 649, 965, 1291
Hpy188I	TCNGA	9 cut(s)	74, 337, 475, 502, 558, 741, 808, 1183, 1327
Hpy8I	GTNNAC	4 cut(s)	28, 649, 965, 1291
Hpy99I	CGWCG	2 cut(s)	83, 287
HpyAV	CCTTC	4 cut(s)	123, 208, 1165, 1255
HpyCH4III	ACNGT	3 cut(s)	25, 244, 628
HpyCH4IV	ACGT	3 cut(s)	645, 734, 1081
HpyCH4V	TGCA	7 cut(s)	346, 754, 937, 984, 1076, 1085, 1092
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1082, 1238
HpyF3I	CTNAG	2 cut(s)	327, 1272
HpySE526I	ACGT	3 cut(s)	645, 734, 1081
HspAI	GCGC	1 cut(s)	466
Ksp22I	TGATCA	3 cut(s)	255, 274, 361
Kzo9I	GATC	8 cut(s)	255, 274, 361, 808, 955, 1113, 1314, 1387
LguI	GCTCTTC	1 cut(s)	151
LmnI	GCTCC	3 cut(s)	832, 1170, 1273
Lsp1109I	GCAGC	2 cut(s)	277, 1185
LweI	GCATC	3 cut(s)	202, 577, 946
MabI	ACCWGGT	1 cut(s)	883
MaeI	CTAG	2 cut(s)	1053, 1202
MaeII	ACGT	3 cut(s)	645, 734, 1081
MaeIII	GTNAC	2 cut(s)	1318, 1391
MalI	GATC	8 cut(s)	257, 276, 363, 810, 957, 1115, 1316, 1389
MboI	GATC	8 cut(s)	255, 274, 361, 808, 955, 1113, 1314, 1387
MfeI	CAATTG	1 cut(s)	1005
MflI	RGATCY	2 cut(s)	955, 1113
MhlI	GDGCHC	2 cut(s)	894, 1270
MluI	ACGCGT	1 cut(s)	372
MlyI	GAGTC	4 cut(s)	69, 170, 341, 644
MmeI	TCCRAC	1 cut(s)	97
Mph1103I	ATGCAT	2 cut(s)	756, 1078
MroXI	GAANNNNTTC	1 cut(s)	1353
MseI	TTAA	2 cut(s)	453, 614
MslI	CAYNNNNRTG	2 cut(s)	942, 1128
MspI	CCGG	2 cut(s)	34, 231
MspR9I	CCNGG	3 cut(s)	885, 1238, 1368
MunI	CAATTG	1 cut(s)	1005
Mva1269I	GAATGC	1 cut(s)	499
MvaI	CCWGG	3 cut(s)	885, 1238, 1368
MvnI	CGCG	2 cut(s)	282, 374
MwoI	GCNNNNNNNGC	2 cut(s)	1082, 1238
NdeII	GATC	8 cut(s)	255, 274, 361, 808, 955, 1113, 1314, 1387
NlaIV	GGNNCC	2 cut(s)	55, 1269
NmuCI	GTSAC	1 cut(s)	1318
NsiI	ATGCAT	2 cut(s)	756, 1078
NspI	RCATGY	2 cut(s)	754, 1089
NspV	TTCGAA	1 cut(s)	1012
PaeI	GCATGC	1 cut(s)	754
PagI	TCATGA	1 cut(s)	271
PciSI	GCTCTTC	1 cut(s)	151
PcsI	WCGNNNNNNNCGW	1 cut(s)	817
PctI	GAATGC	1 cut(s)	499
PdmI	GAANNNNTTC	1 cut(s)	1353
PfeI	GAWTC	7 cut(s)	158, 302, 728, 763, 947, 1027, 1120
PkrI	GCNGC	4 cut(s)	154, 187, 267, 1200
PleI	GAGTC	4 cut(s)	69, 170, 340, 644
PpsI	GAGTC	4 cut(s)	69, 170, 340, 644
Ppu21I	YACGTR	1 cut(s)	1082
Psp6I	CCWGG	3 cut(s)	883, 1236, 1366
PspGI	CCWGG	3 cut(s)	883, 1236, 1366
PspN4I	GGNNCC	2 cut(s)	55, 1269
PspPI	GGNCC	2 cut(s)	53, 67
PsrI	GAACNNNNNNTAC	4 cut(s)	639, 671, 1239, 1271
PstNI	CAGNNNCTG	2 cut(s)	590, 958
PsuI	RGATCY	2 cut(s)	955, 1113
RsaI	GTAC	3 cut(s)	223, 722, 1212
RsaNI	GTAC	3 cut(s)	222, 721, 1211
RseI	CAYNNNNRTG	2 cut(s)	942, 1128
SapI	GCTCTTC	1 cut(s)	151
SaqAI	TTAA	2 cut(s)	453, 614
SatI	GCNGC	4 cut(s)	153, 186, 266, 1199
Sau3AI	GATC	8 cut(s)	255, 274, 361, 808, 955, 1113, 1314, 1387
Sau96I	GGNCC	2 cut(s)	53, 67
SchI	GAGTC	4 cut(s)	69, 170, 341, 644
ScrFI	CCNGG	3 cut(s)	885, 1238, 1368
SduI	GDGCHC	2 cut(s)	894, 1270
SexAI	ACCWGGT	1 cut(s)	883
SfaNI	GCATC	3 cut(s)	202, 577, 946
SfcI	CTRYAG	1 cut(s)	1218
SfuI	TTCGAA	1 cut(s)	1012
SinI	GGWCC	1 cut(s)	53
SmiMI	CAYNNNNRTG	2 cut(s)	942, 1128
SmlI	CTYRAG	1 cut(s)	659
SmoI	CTYRAG	1 cut(s)	659
SphI	GCATGC	1 cut(s)	754
SsiI	CCGC	5 cut(s)	5, 153, 186, 420, 904
SspMI	CTAG	2 cut(s)	1053, 1202
StyD4I	CCNGG	3 cut(s)	883, 1236, 1366
StyI	CCWWGG	1 cut(s)	841
TaaI	ACNGT	3 cut(s)	25, 244, 628
TaiI	ACGT	3 cut(s)	648, 737, 1084
TaqI	TCGA	5 cut(s)	78, 484, 579, 766, 1012
TaqII	GACCGA	1 cut(s)	786
TatI	WGTACW	1 cut(s)	1210
TauI	GCSGC	2 cut(s)	155, 188
TfiI	GAWTC	7 cut(s)	158, 302, 728, 763, 947, 1027, 1120
Tru1I	TTAA	2 cut(s)	453, 614
Tru9I	TTAA	2 cut(s)	453, 614
TscAI	CASTG	2 cut(s)	631, 765
TseFI	GTSAC	1 cut(s)	1318
TseI	GCWGC	2 cut(s)	265, 1198
Tsp45I	GTSAC	1 cut(s)	1318
TspDTI	ATGAA	9 cut(s)	260, 294, 575, 581, 960, 1040, 1112, 1271, 1362
TspGWI	ACGGA	1 cut(s)	539
TspRI	CASTG	2 cut(s)	631, 765
VpaK11BI	GGWCC	1 cut(s)	53
XapI	RAATTY	4 cut(s)	522, 1278, 1352, 1379
XceI	RCATGY	2 cut(s)	754, 1089
XmiI	GTMKAC	2 cut(s)	648, 964
XmnI	GAANNNNTTC	1 cut(s)	1353
XspI	CTAG	2 cut(s)	1053, 1202
Zsp2I	ATGCAT	2 cut(s)	756, 1078

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.