Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003508

Physical Location & Seq

Genomic Coordinates Forward (+)

87587371 .. 87592281

Gene Structure 4911 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ54240

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGCGGAGGAGACGAAGACCACCGTTGACTACCGGATGGAGAGAGCGTCTGGTCCCCACTTCTCGGGCCTCCGACTCGACGGCCTCTTATCTTCTTCGCCTAATTCTTCTCCTTTTTCAGCTTCGCCTCTTTCTCTTCGCTCTTCTGCCGCCGATTCTTCAAACCTCGCCGACTCCAACGCCGCCAAGCAGCCCTTCGTCATCGGTGTTTCTGGAGGTACGGCTTCCGGTAAGACCACGGTGTGCGACATGATCATCCAGCAGCTTCACGATCATCGCGTCGTCCTTGTCAATCAGGATTCATTTTATCGTGGTTTGACGCCTGAGGAGTCTGAACGAGTGCATGAGTATAATTTTGATCATCCTGACGCGTTTGACACTGAGCAGATGTTAGAGTGTGTTCAAAAGCTAAAAAGCGGGCAGTCTGTCCAAGTTCCAATATATGATTTTAAGATACATCGGCGCAGTTCTGATAGTTTTCGACAGGTGAATGCTTCTGATGTAATAATCTTGGAGGGAATTCTGGTTTTCCATGACCAGCGTGTCCGTAATCTGATGAACATGAAGATTTTTGTCGATACAGATGCTGATGTGAGACTTGCTCGTAGATTAAGACGAGACACTGTTGAGAGGGGCAGGAACGTAGACTCTGTTCTTGAGCAGTATGCCAAGTTTGTCAAGCCTGCTTTTGATGATTTTGTTCTCCCCTCAAAGAAGTACGCTGATGTGATCATTCCCCGGGGAGGCGATAACCATGTTGCTATTGACTTAATTGTACAACATATTCGCACAAAGCTTGGTCAGCATGACCTTTGCGAAATATATCCTAATGTGTACGTTATACAGTCCACGTTTCAGATTAGAGGCATGCATACACTGATTCGAGACCGAGAAATATCAAAGCATGATTTTGTATTTTATTCAGATCGCCTAATTTGTCTGGTTGTGGAGCATGGCCTTGGTCATTTGCCTTTCACAGAGAAACAAGTGATAACTCCACCAGGATCTGTGTATACTGGGGTTGATTTCTGCAAGAAATTATGTGGAGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAAAATGCATTACGTGCATGTTGCAAAGGAATAAAAATTGGGAAGATCTTGATTCATCGTGATGGAGACGATGGCAAACAGCTTATATATGAGAAGCTCCCCAAGGATATTTCAGAGCGTCATGTCCTGCTGCTAGACCCTGTACTTGCTACAGGTAATTCTGCTAACCAGGCTATTGAACTACTCATACAGAAGGGGGTTCCTGAATCACATATAATATTCTTAAACCTTATATCTGCTCCTGAGGGAATTCATTGTGTTTACAAACGATTTCCATCCTTGAAGATCGTCACTTCAGAGATTGATATTGCCCTCAATGAAGAATTTCGTGTCATACCAGGGTTGGGTGAATTTGGGGATCGTTACTTCGGCACAGATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001704 GO:0001706 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0006810 GO:0006833 GO:0006950 GO:0007275 GO:0007369 GO:0007389 GO:0007492 GO:0008104 GO:0008150 GO:0009505 GO:0009531 GO:0009611 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0009987 GO:0010154 GO:0010453 GO:0010470 GO:0016020 GO:0022414 GO:0022603 GO:0030104 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0033036 GO:0035987 GO:0042044 GO:0042592 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045184 GO:0045595 GO:0045995 GO:0048226 GO:0048316 GO:0048598 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051302 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0061458 GO:0065001 GO:0065007 GO:0065008 GO:0071944 GO:0090558 GO:0090708 GO:0098771 GO:0099402 GO:1903224 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

486

Amino Acids

54.5

Weight (kDa)

6.15

Isoelectric Point (pI)

43.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	67 - 253	2.1e-50	Phosphoribulokinase / Uridine kinase family
CoaE	PF01121	67 - 235	9.7e-06	Dephospho-CoA kinase
UPRTase	PF14681	283 - 484	1.4e-73	Uracil phosphoribosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003508)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27190 AT5G40870
fragaria_vesca	FvH4_6g53220
malus_domestica	MD09G1012900.v1.1 MD17G1013500.v1.1
prunus_persica	Prupe.3G304300_v2.0.a1
pyrus_communis	pycom111g01070 pycom17g01080
rosa_chinensis	RchiOBHm_Chr2g0143031 RchiOBHm_Chr2g0143071 RchiOBHm_Chr2g0175311
rosa_laevigata	RLG00000020006 RLG00000022319
rosa_multiflora	Rmu_sc0003512.1_g000003
rosa_roxburghii	Rroxscaffold_2G00077440 Rroxscaffold_2G00102120 Rroxscaffold_2G00102150
rosa_rugosa	Rorug02G0377700 Rorug02G0582700
rosa_samantha	Rh2AG401300 Rh2AG430800 Rh2AG663000 Rh2AG663400 Rh2BG197300 Rh2BG439700 Rh2BG674200 Rh2BG674300 Rh2CG387500 Rh2CG416500 Rh2CG637300 Rh2DG450000 Rh5AG496000
rosa_wichuraiana	Rw2G035190 Rw2G035210 Rw2G054360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	542
AccI	GTMKAC	2 cut(s)	645, 1013
AccII	CGCG	2 cut(s)	279, 371
AciI	CCGC	4 cut(s)	5, 150, 183, 417
AclWI	GGATC	2 cut(s)	1012, 1443
AcsI	RAATTY	4 cut(s)	519, 1326, 1400, 1427
AcuI	CTGAAG	1 cut(s)	1356
AcyI	GRCGYC	1 cut(s)	320
AdeI	CACNNNGTG	1 cut(s)	243
AfaI	GTAC	5 cut(s)	220, 719, 777, 836, 1221
AfiI	CCNNNNNNNGG	3 cut(s)	64, 743, 1421
AflIII	ACRYGT	1 cut(s)	369
AgsI	TTSAA	5 cut(s)	162, 404, 1053, 1256, 1360
AjnI	CCWGG	3 cut(s)	1000, 1245, 1414
AjuI	GAANNNNNNNTTGG	2 cut(s)	179, 211
AluBI	AGCT	6 cut(s)	122, 265, 409, 796, 1159, 1174
AluI	AGCT	6 cut(s)	122, 265, 409, 796, 1159, 1174
Alw26I	GTCTC	5 cut(s)	5, 589, 612, 879, 1137
AlwI	GGATC	2 cut(s)	1012, 1443
AlwNI	CAGNNNCTG	2 cut(s)	587, 1007
Ama87I	CYCGRG	2 cut(s)	64, 738
AoxI	GGCC	3 cut(s)	67, 82, 955
ApeKI	GCWGC	3 cut(s)	190, 262, 1207
ApoI	RAATTY	4 cut(s)	519, 1326, 1400, 1427
Asp700I	GAANNNNTTC	1 cut(s)	1401
AspLEI	GCGC	1 cut(s)	465
AspS9I	GGNCC	2 cut(s)	53, 67
AsuC2I	CCSGG	2 cut(s)	739, 740
AsuHPI	GGTGA	3 cut(s)	499, 1079, 1436
AsuII	TTCGAA	1 cut(s)	1060
AvaI	CYCGRG	2 cut(s)	64, 738
AvaII	GGWCC	1 cut(s)	53
AxyI	CCTNAGG	2 cut(s)	324, 1320
BbsI	GAAGAC	1 cut(s)	23
BbvI	GCAGC	3 cut(s)	202, 274, 1194
BccI	CCATC	4 cut(s)	31, 1133, 1142, 1360
BceAI	ACGGC	2 cut(s)	97, 237
BcgI	CGANNNNNNTGC	2 cut(s)	566, 600
BciT130I	CCWGG	3 cut(s)	1002, 1247, 1416
BclI	TGATCA	3 cut(s)	252, 358, 729
BcnI	CCSGG	2 cut(s)	739, 740
BcoDI	GTCTC	5 cut(s)	5, 589, 612, 879, 1137
BfaI	CTAG	1 cut(s)	1211
BfmI	CTRYAG	1 cut(s)	1227
BglII	AGATCT	1 cut(s)	1122
BisI	GCNGC	5 cut(s)	150, 183, 191, 263, 1208
BlsI	GCNGC	5 cut(s)	151, 184, 192, 264, 1209
Bme1390I	CCNGG	5 cut(s)	739, 740, 1002, 1247, 1416
Bme18I	GGWCC	1 cut(s)	53
BmeT110I	CYCGRG	2 cut(s)	64, 738
BmgT120I	GGNCC	2 cut(s)	53, 67
BmiI	GGNNCC	2 cut(s)	55, 1278
BmrFI	CCNGG	5 cut(s)	739, 740, 1002, 1247, 1416
BmrI	ACTGGG	1 cut(s)	1026
BmsI	GCATC	1 cut(s)	574
BmuI	ACTGGG	1 cut(s)	1026
BpiI	GAAGAC	1 cut(s)	23
BplI	GAGNNNNNCTC	2 cut(s)	586, 618
BpmI	CTGGAG	1 cut(s)	234
Bpu14I	TTCGAA	1 cut(s)	1060
BpuEI	CTTGAG	1 cut(s)	677
BpuMI	CCSGG	2 cut(s)	739, 740
BsaAI	YACGTR	1 cut(s)	1091
BsaBI	GATNNNNATC	1 cut(s)	1351
BsaHI	GRCGYC	1 cut(s)	320
BsaI	GGTCTC	1 cut(s)	879
BsaJI	CCNNGG	7 cut(s)	237, 737, 738, 739, 958, 1179, 1415
BsaWI	WCCGGW	2 cut(s)	33, 227
BsaXI	ACNNNNNCTCC	2 cut(s)	32, 62
Bsc4I	CCNNNNNNNGG	3 cut(s)	64, 743, 1421
Bse1I	ACTGG	1 cut(s)	1021
Bse21I	CCTNAGG	2 cut(s)	324, 1320
Bse8I	GATNNNNATC	1 cut(s)	1351
BseBI	CCWGG	3 cut(s)	1002, 1247, 1416
BseDI	CCNNGG	7 cut(s)	237, 737, 738, 739, 958, 1179, 1415
BseGI	GGATG	4 cut(s)	42, 255, 361, 1352
BseJI	GATNNNNATC	1 cut(s)	1351
BseLI	CCNNNNNNNGG	3 cut(s)	64, 743, 1421
BseMII	CTCAG	3 cut(s)	315, 372, 1311
BseNI	ACTGG	1 cut(s)	1021
BseRI	GAGGAG	2 cut(s)	23, 341
BseXI	GCAGC	3 cut(s)	202, 274, 1194
Bsh1236I	CGCG	2 cut(s)	279, 371
BshFI	GGCC	3 cut(s)	69, 84, 957
BsiHKCI	CYCGRG	2 cut(s)	64, 738
BsiSI	CCGG	3 cut(s)	34, 228, 739
BslFI	GGGAC	1 cut(s)	39
BslI	CCNNNNNNNGG	3 cut(s)	64, 743, 1421
BsmAI	GTCTC	5 cut(s)	5, 589, 612, 879, 1137
BsmBI	CGTCTC	2 cut(s)	5, 1137
BsmFI	GGGAC	1 cut(s)	39
BsmI	GAATGC	1 cut(s)	496
BsnI	GGCC	3 cut(s)	69, 84, 957
Bso31I	GGTCTC	1 cut(s)	879
BsoBI	CYCGRG	2 cut(s)	64, 738
Bsp119I	TTCGAA	1 cut(s)	1060
Bsp1407I	TGTACA	1 cut(s)	775
Bsp143I	GATC	9 cut(s)	252, 271, 358, 729, 925, 1004, 1122, 1362, 1435
BspACI	CCGC	4 cut(s)	5, 150, 183, 417
BspANI	GGCC	3 cut(s)	69, 84, 957
BspCNI	CTCAG	3 cut(s)	316, 373, 1312
BspFNI	CGCG	2 cut(s)	279, 371
BspLI	GGNNCC	2 cut(s)	55, 1278
BspPI	GGATC	2 cut(s)	1012, 1443
BspQI	GCTCTTC	1 cut(s)	148
BspT104I	TTCGAA	1 cut(s)	1060
BspTNI	GGTCTC	1 cut(s)	879
BsrGI	TGTACA	1 cut(s)	775
BsrI	ACTGG	1 cut(s)	1021
BssECI	CCNNGG	7 cut(s)	237, 737, 738, 739, 958, 1179, 1415
BssMI	GATC	9 cut(s)	252, 271, 358, 729, 925, 1004, 1122, 1362, 1435
BssNAI	GTATAC	1 cut(s)	1014
BssNI	GRCGYC	1 cut(s)	320
BssT1I	CCWWGG	2 cut(s)	958, 1179
Bst1107I	GTATAC	1 cut(s)	1014
Bst2UI	CCWGG	3 cut(s)	1002, 1247, 1416
Bst4CI	ACNGT	4 cut(s)	25, 241, 625, 846
Bst6I	CTCTTC	2 cut(s)	141, 148
BstACI	GRCGYC	1 cut(s)	320
BstAPI	GCANNNNNTGC	1 cut(s)	1091
BstAUI	TGTACA	1 cut(s)	775
BstBAI	YACGTR	1 cut(s)	1091
BstBI	TTCGAA	1 cut(s)	1060
BstC8I	GCNNGC	3 cut(s)	419, 684, 869
BstDEI	CTNAG	3 cut(s)	324, 381, 1320
BstDSI	CCRYGG	1 cut(s)	237
BstF5I	GGATG	4 cut(s)	42, 255, 361, 1352
BstFNI	CGCG	2 cut(s)	279, 371
BstHHI	GCGC	1 cut(s)	465
BstKTI	GATC	9 cut(s)	255, 274, 361, 732, 928, 1007, 1125, 1365, 1438
BstMAI	GTCTC	5 cut(s)	5, 589, 612, 879, 1137
BstMBI	GATC	9 cut(s)	252, 271, 358, 729, 925, 1004, 1122, 1362, 1435
BstMWI	GCNNNNNNNGC	3 cut(s)	802, 1091, 1247
BstNI	CCWGG	3 cut(s)	1002, 1247, 1416
BstNSI	RCATGY	2 cut(s)	871, 1098
BstSCI	CCNGG	5 cut(s)	737, 738, 1000, 1245, 1414
BstSFI	CTRYAG	1 cut(s)	1227
BstUI	CGCG	2 cut(s)	279, 371
BstV1I	GCAGC	3 cut(s)	202, 274, 1194
BstV2I	GAAGAC	1 cut(s)	23
BstX2I	RGATCY	2 cut(s)	1004, 1122
BstYI	RGATCY	2 cut(s)	1004, 1122
BstZ17I	GTATAC	1 cut(s)	1014
Bsu36I	CCTNAGG	2 cut(s)	324, 1320
BsuRI	GGCC	3 cut(s)	69, 84, 957
BtgI	CCRYGG	1 cut(s)	237
BtgZI	GCGATG	1 cut(s)	260
BtsCI	GGATG	4 cut(s)	42, 255, 361, 1352
BtsIMutI	CAGTG	3 cut(s)	378, 621, 875
Cac8I	GCNNGC	3 cut(s)	419, 684, 869
CaiI	CAGNNNCTG	2 cut(s)	587, 1007
CfoI	GCGC	1 cut(s)	465
Cfr13I	GGNCC	2 cut(s)	53, 67
Cfr9I	CCCGGG	1 cut(s)	738
CseI	GACGC	5 cut(s)	36, 268, 328, 377, 1184
Csp6I	GTAC	5 cut(s)	219, 718, 776, 835, 1220
CviQI	GTAC	5 cut(s)	219, 718, 776, 835, 1220
DdeI	CTNAG	3 cut(s)	324, 381, 1320
DpnI	GATC	9 cut(s)	254, 273, 360, 731, 927, 1006, 1124, 1364, 1437
DpnII	GATC	9 cut(s)	252, 271, 358, 729, 925, 1004, 1122, 1362, 1435
DraIII	CACNNNGTG	1 cut(s)	243
DrdI	GACNNNNNNGTC	1 cut(s)	542
DseDI	GACNNNNNNGTC	1 cut(s)	542
Eam1104I	CTCTTC	2 cut(s)	141, 148
EarI	CTCTTC	2 cut(s)	141, 148
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	2 cut(s)	958, 1179
Eco31I	GGTCTC	1 cut(s)	879
Eco47I	GGWCC	1 cut(s)	53
Eco57I	CTGAAG	1 cut(s)	1356
Eco81I	CCTNAGG	2 cut(s)	324, 1320
Eco88I	CYCGRG	2 cut(s)	64, 738
EcoRI	GAATTC	2 cut(s)	519, 1326
EcoRII	CCWGG	3 cut(s)	1000, 1245, 1414
EcoT14I	CCWWGG	2 cut(s)	958, 1179
EcoT22I	ATGCAT	2 cut(s)	873, 1087
ErhI	CCWWGG	2 cut(s)	958, 1179
Esp3I	CGTCTC	2 cut(s)	5, 1137
FalI	AAGNNNNNCTT	2 cut(s)	179, 211
FaqI	GGGAC	1 cut(s)	39
FauI	CCCGC	1 cut(s)	410
FbaI	TGATCA	3 cut(s)	252, 358, 729
FblI	GTMKAC	2 cut(s)	645, 1013
Fnu4HI	GCNGC	5 cut(s)	150, 183, 191, 263, 1208
FokI	GGATG	4 cut(s)	49, 242, 348, 1339
Fsp4HI	GCNGC	5 cut(s)	150, 183, 191, 263, 1208
FspBI	CTAG	1 cut(s)	1211
GlaI	GCGC	1 cut(s)	464
GluI	GCNGC	5 cut(s)	150, 183, 191, 263, 1208
GsuI	CTGGAG	1 cut(s)	234
HaeIII	GGCC	3 cut(s)	69, 84, 957
HapII	CCGG	3 cut(s)	34, 228, 739
HgaI	GACGC	5 cut(s)	36, 268, 328, 377, 1184
HhaI	GCGC	1 cut(s)	465
Hin1I	GRCGYC	1 cut(s)	320
Hin6I	GCGC	1 cut(s)	463
HinP1I	GCGC	1 cut(s)	463
HincII	GTYRAC	1 cut(s)	28
HindII	GTYRAC	1 cut(s)	28
HindIII	AAGCTT	1 cut(s)	794
HinfI	GANTC	9 cut(s)	75, 155, 173, 299, 329, 647, 880, 1129, 1283
HpaII	CCGG	3 cut(s)	34, 228, 739
HphI	GGTGA	3 cut(s)	499, 1079, 1436
Hpy166II	GTNNAC	6 cut(s)	28, 646, 835, 849, 1014, 1339
Hpy188I	TCNGA	9 cut(s)	74, 334, 472, 499, 555, 858, 925, 1192, 1375
Hpy8I	GTNNAC	6 cut(s)	28, 646, 835, 849, 1014, 1339
Hpy99I	CGWCG	2 cut(s)	83, 284
HpyAV	CCTTC	2 cut(s)	205, 1264
HpyCH4III	ACNGT	4 cut(s)	25, 241, 625, 846
HpyCH4IV	ACGT	4 cut(s)	642, 837, 851, 1090
HpyCH4V	TGCA	6 cut(s)	343, 871, 1032, 1085, 1094, 1101
HpyF10VI	GCNNNNNNNGC	3 cut(s)	802, 1091, 1247
HpyF3I	CTNAG	3 cut(s)	324, 381, 1320
HpySE526I	ACGT	4 cut(s)	642, 837, 851, 1090
Hsp92I	GRCGYC	1 cut(s)	320
HspAI	GCGC	1 cut(s)	463
Ksp22I	TGATCA	3 cut(s)	252, 358, 729
Kzo9I	GATC	9 cut(s)	252, 271, 358, 729, 925, 1004, 1122, 1362, 1435
LguI	GCTCTTC	1 cut(s)	148
LmnI	GCTCC	3 cut(s)	949, 1179, 1321
Lsp1109I	GCAGC	3 cut(s)	202, 274, 1194
LweI	GCATC	1 cut(s)	574
MaeI	CTAG	1 cut(s)	1211
MaeII	ACGT	4 cut(s)	642, 837, 851, 1090
MaeIII	GTNAC	2 cut(s)	1366, 1439
MalI	GATC	9 cut(s)	254, 273, 360, 731, 927, 1006, 1124, 1364, 1437
MboI	GATC	9 cut(s)	252, 271, 358, 729, 925, 1004, 1122, 1362, 1435
MfeI	CAATTG	1 cut(s)	1053
MflI	RGATCY	2 cut(s)	1004, 1122
MluI	ACGCGT	1 cut(s)	369
MlyI	GAGTC	4 cut(s)	69, 167, 338, 641
MmeI	TCCRAC	2 cut(s)	97, 201
Mph1103I	ATGCAT	2 cut(s)	873, 1087
MroXI	GAANNNNTTC	1 cut(s)	1401
MseI	TTAA	4 cut(s)	450, 611, 770, 1301
MslI	CAYNNNNRTG	1 cut(s)	1137
MspI	CCGG	3 cut(s)	34, 228, 739
MspR9I	CCNGG	5 cut(s)	739, 740, 1002, 1247, 1416
MunI	CAATTG	1 cut(s)	1053
Mva1269I	GAATGC	1 cut(s)	496
MvaI	CCWGG	3 cut(s)	1002, 1247, 1416
MvnI	CGCG	2 cut(s)	279, 371
MwoI	GCNNNNNNNGC	3 cut(s)	802, 1091, 1247
NciI	CCSGG	2 cut(s)	739, 740
NdeII	GATC	9 cut(s)	252, 271, 358, 729, 925, 1004, 1122, 1362, 1435
NlaIV	GGNNCC	2 cut(s)	55, 1278
NmuCI	GTSAC	1 cut(s)	1366
NsiI	ATGCAT	2 cut(s)	873, 1087
NspI	RCATGY	2 cut(s)	871, 1098
NspV	TTCGAA	1 cut(s)	1060
PaeI	GCATGC	1 cut(s)	871
PciSI	GCTCTTC	1 cut(s)	148
PcsI	WCGNNNNNNNCGW	1 cut(s)	276
PctI	GAATGC	1 cut(s)	496
PdmI	GAANNNNTTC	1 cut(s)	1401
PfeI	GAWTC	5 cut(s)	155, 299, 880, 1129, 1283
PkrI	GCNGC	5 cut(s)	151, 184, 192, 264, 1209
PleI	GAGTC	4 cut(s)	69, 167, 337, 641
PpsI	GAGTC	4 cut(s)	69, 167, 337, 641
Ppu21I	YACGTR	1 cut(s)	1091
Psp6I	CCWGG	3 cut(s)	1000, 1245, 1414
PspGI	CCWGG	3 cut(s)	1000, 1245, 1414
PspN4I	GGNNCC	2 cut(s)	55, 1278
PspPI	GGNCC	2 cut(s)	53, 67
PsrI	GAACNNNNNNTAC	4 cut(s)	636, 668, 1248, 1280
PstNI	CAGNNNCTG	2 cut(s)	587, 1007
PsuI	RGATCY	2 cut(s)	1004, 1122
RsaI	GTAC	5 cut(s)	220, 719, 777, 836, 1221
RsaNI	GTAC	5 cut(s)	219, 718, 776, 835, 1220
RseI	CAYNNNNRTG	1 cut(s)	1137
SapI	GCTCTTC	1 cut(s)	148
SaqAI	TTAA	4 cut(s)	450, 611, 770, 1301
SatI	GCNGC	5 cut(s)	150, 183, 191, 263, 1208
Sau3AI	GATC	9 cut(s)	252, 271, 358, 729, 925, 1004, 1122, 1362, 1435
Sau96I	GGNCC	2 cut(s)	53, 67
SchI	GAGTC	4 cut(s)	69, 167, 338, 641
ScrFI	CCNGG	5 cut(s)	739, 740, 1002, 1247, 1416
SfaNI	GCATC	1 cut(s)	574
SfcI	CTRYAG	1 cut(s)	1227
SfuI	TTCGAA	1 cut(s)	1060
SinI	GGWCC	1 cut(s)	53
SmaI	CCCGGG	1 cut(s)	740
SmiMI	CAYNNNNRTG	1 cut(s)	1137
SmlI	CTYRAG	1 cut(s)	656
SmoI	CTYRAG	1 cut(s)	656
SphI	GCATGC	1 cut(s)	871
SsiI	CCGC	4 cut(s)	5, 150, 183, 417
SspI	AATATT	1 cut(s)	1296
SspMI	CTAG	1 cut(s)	1211
StyD4I	CCNGG	5 cut(s)	737, 738, 1000, 1245, 1414
StyI	CCWWGG	2 cut(s)	958, 1179
TaaI	ACNGT	4 cut(s)	25, 241, 625, 846
TaiI	ACGT	4 cut(s)	645, 840, 854, 1093
TaqI	TCGA	5 cut(s)	78, 481, 576, 883, 1060
TaqII	GACCGA	1 cut(s)	903
TatI	WGTACW	2 cut(s)	775, 1219
TauI	GCSGC	2 cut(s)	152, 185
TfiI	GAWTC	5 cut(s)	155, 299, 880, 1129, 1283
Tru1I	TTAA	4 cut(s)	450, 611, 770, 1301
Tru9I	TTAA	4 cut(s)	450, 611, 770, 1301
TscAI	CASTG	3 cut(s)	385, 628, 882
TseFI	GTSAC	1 cut(s)	1366
TseI	GCWGC	3 cut(s)	190, 262, 1207
Tsp45I	GTSAC	1 cut(s)	1366
TspDTI	ATGAA	6 cut(s)	291, 572, 578, 1121, 1319, 1410
TspGWI	ACGGA	1 cut(s)	536
TspMI	CCCGGG	1 cut(s)	738
TspRI	CASTG	3 cut(s)	385, 628, 882
VpaK11BI	GGWCC	1 cut(s)	53
XapI	RAATTY	4 cut(s)	519, 1326, 1400, 1427
XceI	RCATGY	2 cut(s)	871, 1098
XmaI	CCCGGG	1 cut(s)	738
XmiI	GTMKAC	2 cut(s)	645, 1013
XmnI	GAANNNNTTC	1 cut(s)	1401
XspI	CTAG	1 cut(s)	1211
Zsp2I	ATGCAT	2 cut(s)	873, 1087

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.